Guide to the Human Genome
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Name: MSRA Sequence: fasta or formatted (235aa) NCBI GI: 6912516
Description:

methionine sulfoxide reductase A isoform a

Referenced in:

Additional Protein Modifications

Other entries for this name:
alt prot [195aa] methionine sulfoxide reductase A isoform b
alt prot [192aa] methionine sulfoxide reductase A isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         15           2
 C cysteine            2.1          5           1
 D aspartate           1.7          4           1
 E glutamate           7.2         17           2
 F phenylalanine       4.3         10           1
 G glycine            10.2         24           2
 H histidine           3.8          9           2
 I isoleucine          2.1          5           1
 K lysine              5.5         13           2
 L leucine             6.0         14           4
 M methionine          3.0          7           1
 N asparagine          4.3         10           1
 P proline             6.0         14           1
 Q glutamine           6.0         14           2
 R arginine            4.3         10           2
 S serine              6.8         16           2
 T threonine           6.4         15           2
 V valine              7.7         18           2
 W tryptophan          1.3          3           1
 Y tyrosine            5.1         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methionine sulfoxide reductase A isoform a 
MSRA                  0.804   methionine sulfoxide reductase A isoform c 
MSRA                  0.770   methionine sulfoxide reductase A isoform b 
HSPG2                 0.017   heparan sulfate proteoglycan 2 
C9orf50               0.015   hypothetical protein LOC375759 
C8orf73               0.011   hypothetical protein LOC642475 
RFX7                  0.011   regulatory factor X domain containing 2 
MAP3K6                0.009   mitogen-activated protein kinase kinase kinase 6 [Ho...
SEMG2                 0.009   semenogelin II precursor 
ILDR1                 0.009   immunoglobulin-like domain containing receptor 1 [Ho...
TAOK2                 0.006   TAO kinase 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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