Guide to the Human Genome
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Name: DOM3Z Sequence: fasta or formatted (396aa) NCBI GI: 20631980
Description:

DOM-3 homolog Z

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         25           2
 C cysteine            2.0          8           1
 D aspartate           5.1         20           2
 E glutamate           5.8         23           2
 F phenylalanine       4.8         19           1
 G glycine             6.8         27           2
 H histidine           2.3          9           1
 I isoleucine          0.5          2           1
 K lysine              3.5         14           1
 L leucine             9.6         38           2
 M methionine          2.3          9           1
 N asparagine          2.8         11           1
 P proline            11.6         46           3
 Q glutamine           4.3         17           1
 R arginine            7.6         30           2
 S serine              7.1         28           2
 T threonine           5.3         21           2
 V valine              5.6         22           2
 W tryptophan          2.5         10           2
 Y tyrosine            4.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DOM-3 homolog Z 
GPR162                0.009   G protein-coupled receptor 162 isoform 2 
LOC100293538          0.009   PREDICTED: hypothetical protein 
LOC100291263          0.009   PREDICTED: hypothetical protein XP_002347505 
LOC100287521          0.009   PREDICTED: hypothetical protein XP_002343324 
LOC100291416          0.007   PREDICTED: hypothetical protein XP_002347353 
LOC100288055          0.007   PREDICTED: hypothetical protein XP_002343205 
LOC100293646          0.007   PREDICTED: hypothetical protein 
ERF                   0.007   Ets2 repressor factor 
SLBP                  0.006   stem-loop (histone) binding protein 
LEPREL1               0.006   leprecan-like 1 isoform a 
NBEAL2                0.006   neurobeachin-like 2 
CSDA                  0.005   cold shock domain protein A isoform b 
CSDA                  0.005   cold shock domain protein A isoform a 
R3HDML                0.005   R3H domain containing-like 
GRID2IP               0.005   glutamate receptor, ionotropic, delta 2 (Grid2) int...
LOC731282             0.005   PREDICTED: hypothetical protein 
LOC731282             0.005   PREDICTED: hypothetical protein 
KIF26A                0.005   kinesin family member 26A 
TSPAN4                0.005   tetraspanin 4 isoform b 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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