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Search of human proteins with 20336313
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20336313 B-cell CLL/lymphoma 11A isoform 3 [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20336313 B-cell CLL/lymphoma 11A isoform 3 [Homo sapiens] 513 e-146
gi|20336305 B-cell CLL/lymphoma 11A isoform 1 [Homo sapiens] 448 e-126
gi|20336307 B-cell CLL/lymphoma 11A isoform 2 [Homo sapiens] 448 e-126
gi|21040334 B-cell CLL/lymphoma 11B isoform 1 [Homo sapiens] 226 1e-59
gi|12597635 B-cell CLL/lymphoma 11B isoform 2 [Homo sapiens] 219 1e-57
gi|118442837 sal-like 1 isoform a [Homo sapiens] 44 1e-04
gi|21687252 zinc finger protein 296 [Homo sapiens] 44 2e-04
gi|40807465 zinc finger protein 341 [Homo sapiens] 40 0.002
gi|154146199 sal-like 3 [Homo sapiens] 37 0.020
gi|194018469 zinc finger protein 546 [Homo sapiens] 35 0.045
gi|138175817 zinc finger protein 236 [Homo sapiens] 35 0.059
gi|12751479 zinc finger protein 643 [Homo sapiens] 35 0.077
gi|20304115 zinc finger protein 551 [Homo sapiens] 34 0.13
gi|156416026 zinc finger protein 219 [Homo sapiens] 34 0.13
gi|156415998 zinc finger protein 219 [Homo sapiens] 34 0.13
gi|156415996 zinc finger protein 219 [Homo sapiens] 34 0.13
gi|18254460 splA/ryanodine receptor domain and SOCS box containi... 33 0.17
gi|24308069 zinc finger protein 521 [Homo sapiens] 33 0.29
gi|157412253 hypothetical protein LOC169834 [Homo sapiens] 33 0.29
gi|21328446 hormone-sensitive lipase [Homo sapiens] 32 0.38
gi|55925466 zinc finger protein 599 [Homo sapiens] 32 0.38
gi|7662010 zinc finger protein 516 [Homo sapiens] 32 0.38
gi|122937229 zinc finger protein 629 [Homo sapiens] 32 0.50
gi|10047144 sal-like 4 [Homo sapiens] 32 0.65
gi|239746767 PREDICTED: hypothetical protein [Homo sapiens] 32 0.65
gi|226371655 zinc finger family member 674 isoform 2 [Homo sapiens] 31 0.85
gi|89994742 zinc finger family member 674 isoform 1 [Homo sapiens] 31 0.85
gi|14670360 POZ (BTB) and AT hook containing zinc finger 1 long ... 31 0.85
gi|55770876 notch4 preproprotein [Homo sapiens] 31 0.85
gi|153791350 replication initiator 1 isoform 1 [Homo sapiens] 31 0.85
>gi|20336313 B-cell CLL/lymphoma 11A isoform 3 [Homo sapiens]
Length = 243
Score = 513 bits (1322), Expect = e-146
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI 60
MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI
Sbjct: 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI 60
Query: 61 LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI 120
LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI
Sbjct: 61 LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI 120
Query: 121 CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT 180
CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT
Sbjct: 121 CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT 180
Query: 181 SAWFLLQHAQNTHGLRIYLESEHGSPLTPRVLHTPPFGVVPRELKMCGSFRMEAREPLSS 240
SAWFLLQHAQNTHGLRIYLESEHGSPLTPRVLHTPPFGVVPRELKMCGSFRMEAREPLSS
Sbjct: 181 SAWFLLQHAQNTHGLRIYLESEHGSPLTPRVLHTPPFGVVPRELKMCGSFRMEAREPLSS 240
Query: 241 EKI 243
EKI
Sbjct: 241 EKI 243
>gi|20336305 B-cell CLL/lymphoma 11A isoform 1 [Homo sapiens]
Length = 835
Score = 448 bits (1153), Expect = e-126
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI 60
MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI
Sbjct: 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI 60
Query: 61 LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI 120
LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI
Sbjct: 61 LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI 120
Query: 121 CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT 180
CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT
Sbjct: 121 CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT 180
Query: 181 SAWFLLQHAQNTHGLRIYLESEHGSPLTPRV 211
SAWFLLQHAQNTHGLRIYLESEHGSPLTPRV
Sbjct: 181 SAWFLLQHAQNTHGLRIYLESEHGSPLTPRV 211
>gi|20336307 B-cell CLL/lymphoma 11A isoform 2 [Homo sapiens]
Length = 773
Score = 448 bits (1153), Expect = e-126
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI 60
MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI
Sbjct: 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI 60
Query: 61 LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI 120
LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI
Sbjct: 61 LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI 120
Query: 121 CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT 180
CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT
Sbjct: 121 CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT 180
Query: 181 SAWFLLQHAQNTHGLRIYLESEHGSPLTPRV 211
SAWFLLQHAQNTHGLRIYLESEHGSPLTPRV
Sbjct: 181 SAWFLLQHAQNTHGLRIYLESEHGSPLTPRV 211
>gi|21040334 B-cell CLL/lymphoma 11B isoform 1 [Homo sapiens]
Length = 894
Score = 226 bits (576), Expect = 1e-59
Identities = 143/270 (52%), Positives = 162/270 (60%), Gaps = 52/270 (19%)
Query: 1 MSRRKQGKPQHLSKREF-SPEPLE---AILTDDE----PDHGPLGAPEG--DHDLLTCGQ 50
MSRRKQG PQHLS+RE +PE AIL +DE + LG G D DLLTCGQ
Sbjct: 1 MSRRKQGNPQHLSQRELITPEADHVEAAILEEDEGLEIEEPSGLGLMVGGPDPDLLTCGQ 60
Query: 51 CQMNFPLGDILIFIEHKRKQCNGSL--CLEKAVDK--PPSPSPIEMKKASNPVEVGIQVT 106
CQMNFPLGDIL+FIEHKRKQC GSL C +KA+DK PP S E++K S PVE+GIQVT
Sbjct: 61 CQMNFPLGDILVFIEHKRKQCGGSLGACYDKALDKDSPPPSSRSELRKVSEPVEIGIQVT 120
Query: 107 PEDDDCLSTSSRGICPKQEHIADKLL----------------HWRGLSSPRSAHGALIP- 149
P++DD L + ++GICPKQE+IA H ++SP A GAL P
Sbjct: 121 PDEDDHLLSPTKGICPKQENIAGPCRPAQLPAVAPIAASSHPHSSVITSPLRALGALPPC 180
Query: 150 ---------------TPGMSAEYAPQGI-C----KDEPSSYTCTTCKQPFTSAWFLLQHA 189
T G AP G C KDEPSSY CTTCKQPF SAWFLLQHA
Sbjct: 181 LPLPCCSARPVSGDGTQGEGQTEAPFGCQCQLSGKDEPSSYICTTCKQPFNSAWFLLQHA 240
Query: 190 QNTHGLRIYLE-SEHGSPLTPRVLHTPPFG 218
QNTHG RIYLE S LTPR+ PP G
Sbjct: 241 QNTHGFRIYLEPGPASSSLTPRLTIPPPLG 270
>gi|12597635 B-cell CLL/lymphoma 11B isoform 2 [Homo sapiens]
Length = 823
Score = 219 bits (559), Expect = 1e-57
Identities = 129/233 (55%), Positives = 146/233 (62%), Gaps = 49/233 (21%)
Query: 1 MSRRKQGKPQHLSKREF-SPEPLE---AILTDDE----PDHGPLGAPEG--DHDLLTCGQ 50
MSRRKQG PQHLS+RE +PE AIL +DE + LG G D DLLTCGQ
Sbjct: 1 MSRRKQGNPQHLSQRELITPEADHVEAAILEEDEGLEIEEPSGLGLMVGGPDPDLLTCGQ 60
Query: 51 CQMNFPLGDILIFIEHKRKQCNGSL--CLEKAVDK--PPSPSPIEMKKASNPVEVGIQVT 106
CQMNFPLGDIL+FIEHKRKQC GSL C +KA+DK PP S E++K S PVE+GIQVT
Sbjct: 61 CQMNFPLGDILVFIEHKRKQCGGSLGACYDKALDKDSPPPSSRSELRKVSEPVEIGIQVT 120
Query: 107 PEDDDCLSTSSRGICPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDE 166
P++DD L + ++GICPKQE+IA KDE
Sbjct: 121 PDEDDHLLSPTKGICPKQENIAG----------------------------------KDE 146
Query: 167 PSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLE-SEHGSPLTPRVLHTPPFG 218
PSSY CTTCKQPF SAWFLLQHAQNTHG RIYLE S LTPR+ PP G
Sbjct: 147 PSSYICTTCKQPFNSAWFLLQHAQNTHGFRIYLEPGPASSSLTPRLTIPPPLG 199
>gi|118442837 sal-like 1 isoform a [Homo sapiens]
Length = 1324
Score = 44.3 bits (103), Expect = 1e-04
Identities = 46/173 (26%), Positives = 65/173 (37%), Gaps = 24/173 (13%)
Query: 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMN-FPLGD 59
MSRRKQ KPQH + PE D + + G P D CG+C F L D
Sbjct: 1 MSRRKQAKPQHF---QSDPEVASLPRRDGDTEKGQPSRPTKSKDAHVCGRCCAEFFELSD 57
Query: 60 ILIFIEHKRKQCNGSLCL---EKAVDKP----PSPSPIEMKKASNPVEVGIQVTPEDD-- 110
+L+ HK+ L L E P PSP P NP E + D
Sbjct: 58 LLL---HKKNCTKNQLVLIVNENPASPPETFSPSPPP------DNPDEQMNDTVNKTDQV 108
Query: 111 DCLSTSSRGICPKQE--HIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQG 161
DC S ++E + + + G + +H + P+ S+ + G
Sbjct: 109 DCSDLSEHNGLDREESMEVEAPVANKSGSGTSSGSHSSTAPSSSSSSSSSSGG 161
>gi|21687252 zinc finger protein 296 [Homo sapiens]
Length = 475
Score = 43.5 bits (101), Expect = 2e-04
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 160 QGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTP 209
QG ++E + +C C + FT AW LL+HAQ HGL IY ++E +P P
Sbjct: 147 QGSEREELKALSCLRCGKQFTVAWKLLRHAQWDHGLSIY-QTESEAPEAP 195
Score = 40.8 bits (94), Expect = 0.001
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 18 SPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDILIFIEHKRKQC 71
+P L LT + PD P + DLLTCG+C FPL I F++HK+ C
Sbjct: 86 NPWTLWTPLTPNYPDRQPW--TDKHPDLLTCGRCLQTFPLEAITAFMDHKKLGC 137
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 40.0 bits (92), Expect = 0.002
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 35 PLGAPEGDHDLLTCGQCQMNFPLGDILIFIEHKRKQCNG------SLCLEKAVDKPPSPS 88
P P D D+ CG+C+ F + F+ HKR+QC G ++ L PPS +
Sbjct: 42 PAIQPLDDEDVFLCGKCKKQF--NSLPAFMTHKREQCQGNAPALATVSLATNSIYPPSAA 99
Query: 89 PIEMKKASNPV--EVGIQVTPEDDDCLSTSSRG 119
P +++A P ++ +T + T +G
Sbjct: 100 PTAVQQAPTPANRQISTYITVPPSPLIQTLVQG 132
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 36.6 bits (83), Expect = 0.020
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 23/114 (20%)
Query: 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLG--------APE---GDHDLLTCG 49
MSRRKQ KPQHL E E + D P+H G PE G + C
Sbjct: 1 MSRRKQAKPQHLKSDE------ELLPPDGAPEHAAPGEGAEDADSGPESRSGGEETSVCE 54
Query: 50 QCQMN-FPLGDILIFIEHKRK--QCNGSLCLEKAVDKPPSPSPIEMKKASNPVE 100
+C F D F+EH+R + L + + PP E AS+P E
Sbjct: 55 KCCAEFFKWAD---FLEHQRSCTKLPPVLIVHEDAPAPPPEDFPEPSPASSPSE 105
>gi|194018469 zinc finger protein 546 [Homo sapiens]
Length = 836
Score = 35.4 bits (80), Expect = 0.045
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 169 SYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTP----RVLHTPPFGVVPREL 224
SY C C++ F +L+QH + G R Y E G RV HT G P E
Sbjct: 216 SYECKECRKAFRQQSYLIQHLRIHTGERPYKCMECGKAFCRVGDLRVHHTIHAGERPYEC 275
Query: 225 KMCG-SFRM 232
K CG +FR+
Sbjct: 276 KECGKAFRL 284
Score = 30.8 bits (68), Expect = 1.1
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPL-------TPRVLHTPPFGVVPR 222
Y CT C + F+ + L QH + G + Y+ +E G+ + +HT G +P
Sbjct: 665 YECTECGKTFSRHYHLTQHHRGHTGEKPYICNECGNAFICSYRLTLHQRIHT---GELPY 721
Query: 223 ELKMCG 228
E K CG
Sbjct: 722 ECKECG 727
Score = 28.1 bits (61), Expect = 7.2
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESE-------HGSPLTPRVLHTPPFGVVPR 222
Y C C + F+ +L+QH + G + Y E H R +HT G P
Sbjct: 385 YKCNECGKAFSHGSYLVQHQKIHTGEKPYECKECGKSFSFHAELARHRRIHT---GEKPY 441
Query: 223 ELKMCG-SFRME 233
E + CG +FR++
Sbjct: 442 ECRECGKAFRLQ 453
Score = 28.1 bits (61), Expect = 7.2
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTPRVLHTPPFGV----VPRELK 225
Y C C + F+S + L QH + G + Y+ +E G + T + P E K
Sbjct: 497 YECKECGKTFSSRYHLTQHYRIHTGEKPYICNECGKAFRLQGELTRHHRIHTCEKPYECK 556
Query: 226 MCGSFRMEAREPLSSEKI 243
CG + + + +S ++I
Sbjct: 557 ECGKAFIHSNQFISHQRI 574
>gi|138175817 zinc finger protein 236 [Homo sapiens]
Length = 1845
Score = 35.0 bits (79), Expect = 0.059
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 139 SPRSAHGAL----IPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHG 194
+P+SA A G+S AP + E ++ C C + F+SA L+ H++ HG
Sbjct: 1622 TPQSASAACEEIAYQVAGVSGNLAPGNQPEKEGRAHQCLECDRAFSSAAVLMHHSKEVHG 1681
Query: 195 LRIYLESEHGSPL 207
E HG P+
Sbjct: 1682 ----RERIHGCPV 1690
>gi|12751479 zinc finger protein 643 [Homo sapiens]
Length = 432
Score = 34.7 bits (78), Expect = 0.077
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTPRV-------LHTPPFGVVPR 222
Y C C + F+ + +L QH + G R Y E G + R+ +HT GV P
Sbjct: 317 YICNVCSKTFSHSTYLTQHQRTHTGERPYKCKECGKAFSQRIHLSIHQRVHT---GVKPY 373
Query: 223 ELKMCG-SFRMEA 234
E CG +FR ++
Sbjct: 374 ECSHCGKAFRHDS 386
>gi|20304115 zinc finger protein 551 [Homo sapiens]
Length = 654
Score = 33.9 bits (76), Expect = 0.13
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLT-------PRVLHTPPFGVVPR 222
Y C+ C++ F+ + L+QH + G R Y SE G T R +HT G P
Sbjct: 459 YECSECEKSFSRKFILIQHQRVHTGERPYECSECGKSFTRKSDLIQHRRIHT---GTRPY 515
Query: 223 ELKMCG-SFRMEA 234
E CG SFR +
Sbjct: 516 ECSECGKSFRQRS 528
Score = 31.2 bits (69), Expect = 0.85
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTPRV-------LHTPPFGVVPR 222
Y C+ C + F+ + L+QH + G R Y S+ G P T + +HT G P
Sbjct: 571 YECSECGKSFSQSSSLIQHQRGHTGERPYECSQCGKPFTHKSDLIQHQRVHT---GERPY 627
Query: 223 ELKMCG 228
E CG
Sbjct: 628 ECSECG 633
Score = 28.1 bits (61), Expect = 7.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 160 QGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESE 202
Q +C E Y C+ C++ FT L+QH Q G +++ SE
Sbjct: 226 QSVCS-EGGLYECSKCEKAFTCKNTLVQHQQIHTGQKMFECSE 267
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 33.9 bits (76), Expect = 0.13
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 10/69 (14%)
Query: 149 PTPGMSAEYAPQGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLT 208
PTP +A P P + C C Q FT +WFL H + +H P+
Sbjct: 258 PTPAPAAPEEPPA-----PPEFRCQVCGQSFTQSWFLKGHMRKHKA-----SFDHACPVC 307
Query: 209 PRVLHTPPF 217
R P F
Sbjct: 308 GRCFKEPWF 316
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 33.9 bits (76), Expect = 0.13
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 10/69 (14%)
Query: 149 PTPGMSAEYAPQGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLT 208
PTP +A P P + C C Q FT +WFL H + +H P+
Sbjct: 258 PTPAPAAPEEPPA-----PPEFRCQVCGQSFTQSWFLKGHMRKHKA-----SFDHACPVC 307
Query: 209 PRVLHTPPF 217
R P F
Sbjct: 308 GRCFKEPWF 316
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 33.9 bits (76), Expect = 0.13
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 10/69 (14%)
Query: 149 PTPGMSAEYAPQGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLT 208
PTP +A P P + C C Q FT +WFL H + +H P+
Sbjct: 258 PTPAPAAPEEPPA-----PPEFRCQVCGQSFTQSWFLKGHMRKHKA-----SFDHACPVC 307
Query: 209 PRVLHTPPF 217
R P F
Sbjct: 308 GRCFKEPWF 316
>gi|18254460 splA/ryanodine receptor domain and SOCS box containing
4 [Homo sapiens]
Length = 273
Score = 33.5 bits (75), Expect = 0.17
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 77 LEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGICPKQEHIADKLLHWRG 136
L++ +D P + ++++ A NP + + V +DDD L+ + + I K+ H RG
Sbjct: 37 LDQLLDMPAAGLAVQLRHAWNPEDRSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARG 96
Query: 137 L 137
L
Sbjct: 97 L 97
>gi|24308069 zinc finger protein 521 [Homo sapiens]
Length = 1311
Score = 32.7 bits (73), Expect = 0.29
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 1 MSRRKQGKPQHLS----KREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNF- 55
MSRRKQ KP+ L K E E EA+ P+ G E H +C C F
Sbjct: 1 MSRRKQAKPRSLKDPNCKLEDKTEDGEALDCKKRPEDGEELEDEAVH---SCDSCLQVFE 57
Query: 56 PLGDILIFIEHKRKQCNGSLCLEKAVDKPPSPS 88
L DI EHK QC L VD P+
Sbjct: 58 SLSDI---TEHKINQCQ----LTDGVDVEDDPT 83
>gi|157412253 hypothetical protein LOC169834 [Homo sapiens]
Length = 379
Score = 32.7 bits (73), Expect = 0.29
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 160 QGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTPRVLHTPPF-- 217
QGI +E SY C C++ F + L++H + G + Y +E G + HTP F
Sbjct: 172 QGIHSEE-KSYQCKQCRKVFCHSTSLIRHQRTHTGEKPYECNECGKAFS----HTPAFIQ 226
Query: 218 ------GVVPRELKMCG 228
G P E CG
Sbjct: 227 HQRIHTGEKPYECNACG 243
>gi|21328446 hormone-sensitive lipase [Homo sapiens]
Length = 1076
Score = 32.3 bits (72), Expect = 0.38
Identities = 34/150 (22%), Positives = 51/150 (34%), Gaps = 19/150 (12%)
Query: 78 EKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGICPKQEHIADKLLHWRGL 137
E + D P E S P +V + PED + + + P + + G
Sbjct: 886 ETSSDTPEMSLSAETLSPSTPSDVNFLLPPEDAGEEAEAKNELSPMDRGLGVRAAFPEGF 945
Query: 138 SSPRSAHGA---------LIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFTSAWFLLQH 188
RS+ GA ++ P MS AP + K P + P +L
Sbjct: 946 HPRRSSQGATQMPLYSSPIVKNPFMSPLLAPDSMLKSLPPVHIVACALDPMLDDSVML-- 1003
Query: 189 AQNTHGLRIYLESEHGSPLTPRVLHTPPFG 218
A+ L G P+T RV+ P G
Sbjct: 1004 ARRLRNL--------GQPVTLRVVEDLPHG 1025
>gi|55925466 zinc finger protein 599 [Homo sapiens]
Length = 588
Score = 32.3 bits (72), Expect = 0.38
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHG 204
YTCT C + F+ W L++H Q G++ Y +E G
Sbjct: 199 YTCTECGKGFSKKWALVRHQQIHAGVKPYECNECG 233
>gi|7662010 zinc finger protein 516 [Homo sapiens]
Length = 1163
Score = 32.3 bits (72), Expect = 0.38
Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Query: 151 PGMSAEYAPQGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTPR 210
PG G + P + C C Q F+ WFL H + G +HG + R
Sbjct: 229 PGSGEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMKKHRG-----SFDHGCHICGR 283
Query: 211 VLHTPPF 217
P F
Sbjct: 284 RFKEPWF 290
>gi|122937229 zinc finger protein 629 [Homo sapiens]
Length = 869
Score = 32.0 bits (71), Expect = 0.50
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 122 PKQEHIADKLLHWRGLSSPRSAHGA-------LIPTPGMSAEYAPQGICKDEPSSYTCTT 174
PK + L +RG S P +A G L P G +G+ + +Y C+
Sbjct: 609 PKPPQLRSPRLPFRGNSYPGAAEGRAEAPGQPLKPPEGQEGFSQRRGLLSSK--TYICSH 666
Query: 175 CKQPFTSAWFLLQHAQNTHG 194
C + F LLQH Q THG
Sbjct: 667 CGESFLDRSVLLQH-QLTHG 685
>gi|10047144 sal-like 4 [Homo sapiens]
Length = 1053
Score = 31.6 bits (70), Expect = 0.65
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Query: 1 MSRRKQGKPQHLSKREFSPE-------PLEAILTDDEPDHGPLGAP 39
MSRRKQ KPQH++ E E P A P G LGAP
Sbjct: 1 MSRRKQAKPQHINSEEDQGEQQPQQQTPEFADAAPAAPAAGELGAP 46
>gi|239746767 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 31.6 bits (70), Expect = 0.65
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 163 CKDEPSSYTCTTCKQPFTSAWFLLQH 188
C P S+ C TCK+ + W L QH
Sbjct: 63 CSLRPKSFKCQTCKKSYIGKWGLAQH 88
>gi|226371655 zinc finger family member 674 isoform 2 [Homo sapiens]
Length = 575
Score = 31.2 bits (69), Expect = 0.85
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTPR----VLHTPPFGVVPRELK 225
Y CT CK+ F+ L++H + G + Y SE G + + V H G P E +
Sbjct: 491 YECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSECGKAFSVKSTLIVHHRTHTGEKPYECR 550
Query: 226 MCG 228
CG
Sbjct: 551 DCG 553
>gi|89994742 zinc finger family member 674 isoform 1 [Homo sapiens]
Length = 581
Score = 31.2 bits (69), Expect = 0.85
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 170 YTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTPR----VLHTPPFGVVPRELK 225
Y CT CK+ F+ L++H + G + Y SE G + + V H G P E +
Sbjct: 497 YECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSECGKAFSVKSTLIVHHRTHTGEKPYECR 556
Query: 226 MCG 228
CG
Sbjct: 557 DCG 559
>gi|14670360 POZ (BTB) and AT hook containing zinc finger 1 long C
isoform [Homo sapiens]
Length = 687
Score = 31.2 bits (69), Expect = 0.85
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 167 PSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPL 207
PS++ C+ C + F+SA +L H + HG+ + S H P+
Sbjct: 493 PSNF-CSICNRGFSSASYLKVHVKTHHGVPLPQVSRHQEPI 532
>gi|55770876 notch4 preproprotein [Homo sapiens]
Length = 2003
Score = 31.2 bits (69), Expect = 0.85
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 18/83 (21%)
Query: 107 PEDDDCLSTSSRGICPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDE 166
P +D+C T G C + + D + W G G + SA A G C +
Sbjct: 660 PPEDNC--TCHHGHCQRSSCVCD--VGWTGPECEAELGGCI------SAPCAHGGTCYPQ 709
Query: 167 PSSYTCT--------TCKQPFTS 181
PS Y CT TC + T+
Sbjct: 710 PSGYNCTCPTGYTGPTCSEEMTA 732
>gi|153791350 replication initiator 1 isoform 1 [Homo sapiens]
Length = 567
Score = 31.2 bits (69), Expect = 0.85
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 149 PTPGMSAEYAPQGICKDEPSSYTCTTCKQPFTSAWFLLQHAQNTHGLRIYLESEHG 204
P PG E+ PQ + PS Y+C C + F FL H + G R + +E G
Sbjct: 355 PPPGAPPEH-PQDPIEAPPSLYSCDDCGRSFRLERFLRAHQRQHTGERPFTCAECG 409
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,363,563
Number of Sequences: 37866
Number of extensions: 668011
Number of successful extensions: 3877
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 3479
Number of HSP's gapped (non-prelim): 488
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.