Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 203098013
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo
sapiens]
(610 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens] 1224 0.0
gi|229577391 pyridine nucleotide-disulphide oxidoreductase domai... 53 9e-07
gi|4557735 monoamine oxidase A [Homo sapiens] 46 9e-05
gi|38202207 monoamine oxidase B [Homo sapiens] 46 9e-05
gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo sa... 45 2e-04
gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens] 45 3e-04
gi|50301238 glutathione reductase [Homo sapiens] 42 0.002
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 39 0.011
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 39 0.011
gi|224028271 choroideremia isoform b [Homo sapiens] 38 0.024
gi|9966761 choroideremia isoform a [Homo sapiens] 38 0.024
gi|53832014 choroideremia-like Rab escort protein 2 [Homo sapiens] 38 0.024
gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens] 37 0.053
gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens] 37 0.053
gi|91199540 dihydrolipoamide dehydrogenase precursor [Homo sapiens] 37 0.069
gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens] 37 0.069
gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens] 37 0.069
gi|33519428 thioredoxin reductase 1 isoform 2 [Homo sapiens] 37 0.069
gi|170650615 protoporphyrinogen oxidase [Homo sapiens] 34 0.45
gi|4506001 protoporphyrinogen oxidase [Homo sapiens] 34 0.45
gi|62865635 squalene epoxidase [Homo sapiens] 33 0.77
gi|28559080 spermine oxidase isoform 4 [Homo sapiens] 33 1.00
gi|28559078 spermine oxidase isoform 3 [Homo sapiens] 33 1.00
gi|28559076 spermine oxidase isoform 2 [Homo sapiens] 33 1.00
gi|28559074 spermine oxidase isoform 1 [Homo sapiens] 33 1.00
gi|116256451 amine oxidase (flavin containing) domain 1 [Homo sa... 32 1.3
gi|183227703 mitochondrial translation optimization 1 homolog is... 32 1.3
gi|19882217 mitochondrial translation optimization 1 homolog iso... 32 1.3
gi|74024895 mitochondrial translation optimization 1 homolog iso... 32 1.3
gi|60499001 pipecolic acid oxidase [Homo sapiens] 32 1.7
>gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens]
Length = 610
Score = 1224 bits (3168), Expect = 0.0
Identities = 610/610 (100%), Positives = 610/610 (100%)
Query: 1 MWLPLVLLLAVLLLAVLCKVYLGLFSGSSPNPFSEDVKRPPAPLVTDKEARKKVLKQAFS 60
MWLPLVLLLAVLLLAVLCKVYLGLFSGSSPNPFSEDVKRPPAPLVTDKEARKKVLKQAFS
Sbjct: 1 MWLPLVLLLAVLLLAVLCKVYLGLFSGSSPNPFSEDVKRPPAPLVTDKEARKKVLKQAFS 60
Query: 61 ANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGI 120
ANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGI
Sbjct: 61 ANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGI 120
Query: 121 HYIGRMEEGSIGRFILDQITEGQLDWAPLSSPFDIMVLEGPNGRKEYPMYSGEKAYIQGL 180
HYIGRMEEGSIGRFILDQITEGQLDWAPLSSPFDIMVLEGPNGRKEYPMYSGEKAYIQGL
Sbjct: 121 HYIGRMEEGSIGRFILDQITEGQLDWAPLSSPFDIMVLEGPNGRKEYPMYSGEKAYIQGL 180
Query: 181 KEKFPQEEAIIDKYIKLVKVVSSGAPHAILLKFLPLPVVQLLDRCGLLTRFSPFLQASTQ 240
KEKFPQEEAIIDKYIKLVKVVSSGAPHAILLKFLPLPVVQLLDRCGLLTRFSPFLQASTQ
Sbjct: 181 KEKFPQEEAIIDKYIKLVKVVSSGAPHAILLKFLPLPVVQLLDRCGLLTRFSPFLQASTQ 240
Query: 241 SLAEVLQQLGASSELQAVLSYIFPTYGVTPNHSAFSMHALLVNHYMKGGFYPRGGSSEIA 300
SLAEVLQQLGASSELQAVLSYIFPTYGVTPNHSAFSMHALLVNHYMKGGFYPRGGSSEIA
Sbjct: 241 SLAEVLQQLGASSELQAVLSYIFPTYGVTPNHSAFSMHALLVNHYMKGGFYPRGGSSEIA 300
Query: 301 FHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGVSVKKGHELVNIYCPIVVSNAGLFNTY 360
FHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGVSVKKGHELVNIYCPIVVSNAGLFNTY
Sbjct: 301 FHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGVSVKKGHELVNIYCPIVVSNAGLFNTY 360
Query: 361 EHLLPGNARCLPGVKQQLGTVRPGLGMTSVFICLRGTKEDLHLPSTNYYVYYDTDMDQAM 420
EHLLPGNARCLPGVKQQLGTVRPGLGMTSVFICLRGTKEDLHLPSTNYYVYYDTDMDQAM
Sbjct: 361 EHLLPGNARCLPGVKQQLGTVRPGLGMTSVFICLRGTKEDLHLPSTNYYVYYDTDMDQAM 420
Query: 421 ERYVSMPREEAAEHIPLLFFAFPSAKDPTWEDRFPGRSTMIMLIPTAYEWFEEWQAELKG 480
ERYVSMPREEAAEHIPLLFFAFPSAKDPTWEDRFPGRSTMIMLIPTAYEWFEEWQAELKG
Sbjct: 421 ERYVSMPREEAAEHIPLLFFAFPSAKDPTWEDRFPGRSTMIMLIPTAYEWFEEWQAELKG 480
Query: 481 KRGSDYETFKNSFVEASMSVVLKLFPQLEGKVESVTAGSPLTNQFYLAAPRGACYGADHD 540
KRGSDYETFKNSFVEASMSVVLKLFPQLEGKVESVTAGSPLTNQFYLAAPRGACYGADHD
Sbjct: 481 KRGSDYETFKNSFVEASMSVVLKLFPQLEGKVESVTAGSPLTNQFYLAAPRGACYGADHD 540
Query: 541 LGRLHPCVMASLRAQSPIPNLYLTGQDIFTCGLVGALQGALLCSSAILKRNLYSDLKNLD 600
LGRLHPCVMASLRAQSPIPNLYLTGQDIFTCGLVGALQGALLCSSAILKRNLYSDLKNLD
Sbjct: 541 LGRLHPCVMASLRAQSPIPNLYLTGQDIFTCGLVGALQGALLCSSAILKRNLYSDLKNLD 600
Query: 601 SRIRAQKKKN 610
SRIRAQKKKN
Sbjct: 601 SRIRAQKKKN 610
>gi|229577391 pyridine nucleotide-disulphide oxidoreductase domain 2
[Homo sapiens]
Length = 581
Score = 52.8 bits (125), Expect = 9e-07
Identities = 89/417 (21%), Positives = 157/417 (37%), Gaps = 43/417 (10%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFG-KNGLEFDTGIHYIGRME 127
D VVIG+G GL AAA L + G V E+ GG T G +F + + +
Sbjct: 36 DAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLR 95
Query: 128 -----EGSIGRFILDQITEGQLDWAPL-----SSPFDIMVLEGPN---GRKEYPMYSGEK 174
+ + + L + P+ S +L G + +K+ +S +
Sbjct: 96 PQIYTDLELKKHGLRLHLRNPYSFTPMLEEGAGSKVPRCLLLGTDMAENQKQIAQFSQKD 155
Query: 175 AYIQGLKEKFPQEEAI-IDKYIKLVKVVSSGAPHAILL-KFLPLPVVQLLDRCG--LLTR 230
A + E+F A+ ID + V + H LL + L ++ L + G L +
Sbjct: 156 AQVFPKYEEFMHRLALAIDPLLDAAPVDMAAFQHGSLLQRMRSLSTLKPLLKAGRILGAQ 215
Query: 231 FSPFLQASTQSLAEVLQQLGASSELQAVLSYIFPTYGVTPNHSAFSMHALLVNHYMKGGF 290
+ + T + +VL Q S L+A L+ +T H+ S + LL H++ GG
Sbjct: 216 LPRYYEVLTAPITKVLDQWFESEPLKATLATDAVIGAMTSPHTPGSGYVLL--HHVMGGL 273
Query: 291 --------YPRGGSSEIAFHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGVSVKKGHEL 342
Y +GG ++ G ++ T+ TV V ++S G GV ++ G E
Sbjct: 274 EGMQGAWGYVQGGMGALSDAIASSATTHGASIFTEKTVAKVQVNSEGCVQGVVLEDGTE- 332
Query: 343 VNIYCPIVVSNAGLFNTYEHLLPGNARCLP----------GVKQQLGTVRPGLGMTSVFI 392
+ +V+SN T+ L P LP + + + + F+
Sbjct: 333 --VRSKMVLSNTSPQITFLKLTP--QEWLPEEFLERISQLDTRSPVTKINVAVDRLPSFL 388
Query: 393 CLRGTKEDLHLPSTNYYVYYDTDMDQAMERYVSMPREEAAEHIPLLFFAFPSAKDPT 449
LP ++ + + + + + H P++ PS+ DPT
Sbjct: 389 AAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMDGLPSHRPVIELCIPSSLDPT 445
>gi|4557735 monoamine oxidase A [Homo sapiens]
Length = 527
Score = 46.2 bits (108), Expect = 9e-05
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEF-DTGIHYIG 124
DVVVIG G GL+AA +L + G VLVLE + GG +T +++ D G Y+G
Sbjct: 15 DVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHVDYVDVGGAYVG 71
>gi|38202207 monoamine oxidase B [Homo sapiens]
Length = 520
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 67 KLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEF-DTGIHYIG 124
K DVVV+G G G+AAA +L +G V+VLE + GG +T +++ D G Y+G
Sbjct: 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVG 62
>gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo
sapiens]
Length = 567
Score = 45.1 bits (105), Expect = 2e-04
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 4 PLVLLLAVLLLAVLCKVYLGLFSGS-SPNPFSEDVKRPPAPLVTDKEARKKVLKQAFSAN 62
PL L L VL+ +L V + S +PF + ++ P D E KV+ +
Sbjct: 3 PLALHLLVLVPILLSLVASQDWKAERSQDPFEKCMQDP------DYEQLLKVVTWGLNRT 56
Query: 63 QVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTF 109
P++ V+V+G+G GL AA +L+ AG +V +LE + GG T+
Sbjct: 57 LKPQR--VIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTY 101
>gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens]
Length = 589
Score = 44.7 bits (104), Expect = 3e-04
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 LPLVLLLAVLLLAVLCKVYLGLFSGSSPNPFSEDVKRPPAPLVTDKEARKKVLKQAFSAN 62
L L++L+ +LL V + + + S +PF + ++ P D E KV+ +
Sbjct: 28 LHLLVLVPILLSLVASQDWK---AERSQDPFEKCMQDP------DYEQLLKVVTWGLNRT 78
Query: 63 QVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTF 109
P++ V+V+G+G GL AA +L+ AG +V +LE + GG T+
Sbjct: 79 LKPQR--VIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTY 123
>gi|50301238 glutathione reductase [Homo sapiens]
Length = 522
Score = 41.6 bits (96), Expect = 0.002
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 44 LVTDKEARKKVLKQAFSANQVPE------------KLDVVVIGSGFGGLAAAAILAKAGK 91
L+ + A + L +A + Q P+ D +VIG G GGLA+A A+ G
Sbjct: 29 LLPEPAALTRALSRAMACRQEPQPQGPPPAAGAVASYDYLVIGGGSGGLASARRAAELGA 88
Query: 92 RVLVLEQHTKAGGCCHTFG--KNGLEFDTGIHYIGRMEEGSIGRFILDQITEGQLDWAPL 149
R V+E H K GG C G + ++T +H + G EG+ +W +
Sbjct: 89 RAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYG----FPSCEGKFNWRVI 143
Query: 150 SSPFDIMV 157
D V
Sbjct: 144 KEKRDAYV 151
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 39.3 bits (90), Expect = 0.011
Identities = 22/50 (44%), Positives = 26/50 (52%)
Query: 70 VVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTG 119
V++IGSG GLAAA L G V +LE + GG TF K D G
Sbjct: 301 VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLG 350
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 39.3 bits (90), Expect = 0.011
Identities = 22/50 (44%), Positives = 26/50 (52%)
Query: 70 VVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTG 119
V++IGSG GLAAA L G V +LE + GG TF K D G
Sbjct: 281 VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLG 330
>gi|224028271 choroideremia isoform b [Homo sapiens]
Length = 110
Score = 38.1 bits (87), Expect = 0.024
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 61 ANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGL 114
A+ +P + DV+VIG+G AA +++G+RVL ++ + GG +F +GL
Sbjct: 2 ADTLPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGL 55
>gi|9966761 choroideremia isoform a [Homo sapiens]
Length = 653
Score = 38.1 bits (87), Expect = 0.024
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 61 ANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGL 114
A+ +P + DV+VIG+G AA +++G+RVL ++ + GG +F +GL
Sbjct: 2 ADTLPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGL 55
>gi|53832014 choroideremia-like Rab escort protein 2 [Homo sapiens]
Length = 656
Score = 38.1 bits (87), Expect = 0.024
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 61 ANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGL 114
A+ +P + DVV+IG+G AA +++G+RVL ++ + GG +F +GL
Sbjct: 2 ADNLPTEFDVVIIGTGLPESILAAACSRSGQRVLHIDSRSYYGGNWASFSFSGL 55
>gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens]
Length = 649
Score = 37.0 bits (84), Expect = 0.053
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 48 KEARKKVLKQAFSANQVPEKLD--VVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKA--- 102
+E R + L + +P+ D +++IG G GGLAAA A+ GK+V+VL+ T
Sbjct: 141 QEGRLQKLLKMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLG 200
Query: 103 -----GGCCHTFG 110
GG C G
Sbjct: 201 TRWGLGGTCVNVG 213
>gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens]
Length = 551
Score = 37.0 bits (84), Expect = 0.053
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 48 KEARKKVLKQAFSANQVPEKLD--VVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKA--- 102
+E R + L + +P+ D +++IG G GGLAAA A+ GK+V+VL+ T
Sbjct: 43 QEGRLQKLLKMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLG 102
Query: 103 -----GGCCHTFG 110
GG C G
Sbjct: 103 TRWGLGGTCVNVG 115
>gi|91199540 dihydrolipoamide dehydrogenase precursor [Homo sapiens]
Length = 509
Score = 36.6 bits (83), Expect = 0.069
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 65 PEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFG 110
P DV VIGSG GG AA A+ G + + +E++ GG C G
Sbjct: 39 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVG 84
>gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 36.6 bits (83), Expect = 0.069
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKA--------GGCCHTFG 110
D+++IG G GGLAAA A+ GK+V+VL+ T GG C G
Sbjct: 14 DLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG 63
>gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 36.6 bits (83), Expect = 0.069
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKA--------GGCCHTFG 110
D+++IG G GGLAAA A+ GK+V+VL+ T GG C G
Sbjct: 14 DLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG 63
>gi|33519428 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 36.6 bits (83), Expect = 0.069
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKA--------GGCCHTFG 110
D+++IG G GGLAAA A+ GK+V+VL+ T GG C G
Sbjct: 14 DLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG 63
>gi|170650615 protoporphyrinogen oxidase [Homo sapiens]
Length = 477
Score = 33.9 bits (76), Expect = 0.45
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 70 VVVIGSGFGGLAAAAILAKA--GKRVLVLEQHTKAGGCCHTF-GKNGLEFDTGIHYIGRM 126
VVV+G G GLAA+ L++A +V+++E + GG + G NG F+ G G
Sbjct: 5 VVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPR--GIR 62
Query: 127 EEGSIGRFILDQITEGQLD 145
G++G L ++E LD
Sbjct: 63 PAGALGARTLLLVSELGLD 81
>gi|4506001 protoporphyrinogen oxidase [Homo sapiens]
Length = 477
Score = 33.9 bits (76), Expect = 0.45
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 70 VVVIGSGFGGLAAAAILAKA--GKRVLVLEQHTKAGGCCHTF-GKNGLEFDTGIHYIGRM 126
VVV+G G GLAA+ L++A +V+++E + GG + G NG F+ G G
Sbjct: 5 VVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPR--GIR 62
Query: 127 EEGSIGRFILDQITEGQLD 145
G++G L ++E LD
Sbjct: 63 PAGALGARTLLLVSELGLD 81
>gi|62865635 squalene epoxidase [Homo sapiens]
Length = 574
Score = 33.1 bits (74), Expect = 0.77
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTK 101
+V+++G+G G A AA+L++ G++V V+E+ K
Sbjct: 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERDLK 157
>gi|28559080 spermine oxidase isoform 4 [Homo sapiens]
Length = 532
Score = 32.7 bits (73), Expect = 1.00
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 70 VVVIGSGFGGLAAA-AILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGIHYIGRMEE 128
VVVIG+G GLAAA A+L + V VLE + GG + F+ G +I
Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSHG 86
Query: 129 GSI-----GRFILDQITEGQ 143
I +L++ T+G+
Sbjct: 87 NPIYHLAEANGLLEETTDGE 106
>gi|28559078 spermine oxidase isoform 3 [Homo sapiens]
Length = 190
Score = 32.7 bits (73), Expect = 1.00
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 70 VVVIGSGFGGLAAA-AILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGIHYIGRMEE 128
VVVIG+G GLAAA A+L + V VLE + GG + F+ G +I
Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSHG 86
Query: 129 GSI-----GRFILDQITEGQ 143
I +L++ T+G+
Sbjct: 87 NPIYHLAEANGLLEETTDGE 106
>gi|28559076 spermine oxidase isoform 2 [Homo sapiens]
Length = 502
Score = 32.7 bits (73), Expect = 1.00
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 70 VVVIGSGFGGLAAA-AILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGIHYIGRMEE 128
VVVIG+G GLAAA A+L + V VLE + GG + F+ G +I
Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSHG 86
Query: 129 GSI-----GRFILDQITEGQ 143
I +L++ T+G+
Sbjct: 87 NPIYHLAEANGLLEETTDGE 106
>gi|28559074 spermine oxidase isoform 1 [Homo sapiens]
Length = 555
Score = 32.7 bits (73), Expect = 1.00
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 70 VVVIGSGFGGLAAA-AILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGIHYIGRMEE 128
VVVIG+G GLAAA A+L + V VLE + GG + F+ G +I
Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSHG 86
Query: 129 GSI-----GRFILDQITEGQ 143
I +L++ T+G+
Sbjct: 87 NPIYHLAEANGLLEETTDGE 106
>gi|116256451 amine oxidase (flavin containing) domain 1 [Homo
sapiens]
Length = 590
Score = 32.3 bits (72), Expect = 1.3
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 70 VVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGG 104
V++IG+G GLAAA L G +V VLE + GG
Sbjct: 253 VIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 287
>gi|183227703 mitochondrial translation optimization 1 homolog
isoform c [Homo sapiens]
Length = 732
Score = 32.3 bits (72), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGG---CCHTFGKNG 113
DV+VIG G G AA A+ G R L+L G C +FG G
Sbjct: 38 DVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIG 85
>gi|19882217 mitochondrial translation optimization 1 homolog
isoform b [Homo sapiens]
Length = 717
Score = 32.3 bits (72), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGG---CCHTFGKNG 113
DV+VIG G G AA A+ G R L+L G C +FG G
Sbjct: 38 DVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIG 85
>gi|74024895 mitochondrial translation optimization 1 homolog
isoform a [Homo sapiens]
Length = 692
Score = 32.3 bits (72), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGG---CCHTFGKNG 113
DV+VIG G G AA A+ G R L+L G C +FG G
Sbjct: 38 DVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSCNPSFGGIG 85
>gi|60499001 pipecolic acid oxidase [Homo sapiens]
Length = 390
Score = 32.0 bits (71), Expect = 1.7
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQ 98
D +VIG+G G A LAK KR+L+LEQ
Sbjct: 9 DAIVIGAGIQGCFTAYHLAKHRKRILLLEQ 38
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,353,166
Number of Sequences: 37866
Number of extensions: 1080144
Number of successful extensions: 2335
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2295
Number of HSP's gapped (non-prelim): 47
length of query: 610
length of database: 18,247,518
effective HSP length: 108
effective length of query: 502
effective length of database: 14,157,990
effective search space: 7107310980
effective search space used: 7107310980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.