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Search of human proteins with 20127446
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20127446 integrin, beta 5 [Homo sapiens]
(799 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20127446 integrin, beta 5 [Homo sapiens] 1684 0.0
gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens] 904 0.0
gi|9625002 integrin, beta 6 [Homo sapiens] 783 0.0
gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens] 653 0.0
gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens] 652 0.0
gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens] 652 0.0
gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens] 641 0.0
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 640 0.0
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 640 0.0
gi|4504777 integrin, beta 7 [Homo sapiens] 560 e-159
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 532 e-151
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 532 e-151
gi|4504779 integrin, beta 8 precursor [Homo sapiens] 508 e-144
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 436 e-122
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 436 e-122
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 436 e-122
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 130 4e-30
gi|153946395 tenascin C precursor [Homo sapiens] 94 7e-19
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 87 5e-17
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 85 2e-16
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 84 5e-16
gi|62988324 tenascin N [Homo sapiens] 80 7e-15
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 78 4e-14
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 76 1e-13
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 76 1e-13
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 76 1e-13
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 75 2e-13
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 71 5e-12
gi|157384973 tenascin R [Homo sapiens] 70 6e-12
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 69 1e-11
>gi|20127446 integrin, beta 5 [Homo sapiens]
Length = 799
Score = 1684 bits (4361), Expect = 0.0
Identities = 799/799 (100%), Positives = 799/799 (100%)
Query: 1 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI 60
MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
Sbjct: 1 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI 60
Query: 61 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP 120
TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
Sbjct: 61 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP 120
Query: 121 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG 180
GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
Sbjct: 121 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG 180
Query: 181 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS 240
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
Sbjct: 181 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS 240
Query: 241 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC 300
RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
Sbjct: 241 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC 300
Query: 301 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL 360
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
Sbjct: 301 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL 360
Query: 361 DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD 420
DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
Sbjct: 361 DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD 420
Query: 421 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG 480
TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
Sbjct: 421 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG 480
Query: 481 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF 540
TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
Sbjct: 481 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF 540
Query: 541 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ 600
GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
Sbjct: 541 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ 600
Query: 601 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL 660
ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
Sbjct: 601 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL 660
Query: 661 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA 720
CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
Sbjct: 661 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA 720
Query: 721 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
Sbjct: 721 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
Query: 781 HTVDFTFNKFNKSYNGTVD 799
HTVDFTFNKFNKSYNGTVD
Sbjct: 781 HTVDFTFNKFNKSYNGTVD 799
>gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens]
Length = 788
Score = 904 bits (2336), Expect = 0.0
Identities = 441/800 (55%), Positives = 562/800 (70%), Gaps = 25/800 (3%)
Query: 5 PAPLYACLLGLCALLP-RLAGLNICTSGSATSCEECLLIHPKCAWCSKE--DFGSPRSIT 61
P PL+A +L L AL + G NICT+ +SC++CL + P CAWCS E GSPR
Sbjct: 7 PRPLWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPR--- 63
Query: 62 SRCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP 120
CDL+ NL+K+ C E IE P S VL PLS KGSG + V Q++PQ IA+ LRP
Sbjct: 64 --CDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSS-QVTQVSPQRIALRLRP 120
Query: 121 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG 180
D F +QVRQVEDYPVD+YYLMDLS SMKDDL +I++LGTKLA +MRKLTSN R+GFG
Sbjct: 121 DDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFG 180
Query: 181 SFVDKDISPFSYTAP-RYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRV 239
+FVDK +SP+ Y +P NPC Y + C+P FG++H+L LTD+V FNEEV+KQ V
Sbjct: 181 AFVDKPVSPYMYISPPEALENPC--YDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSV 238
Query: 240 SRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQ 299
SRNRDAPEGGFDA++QA VC EKIGWR DA HLLVFTTD HIALDG+L G+VQP+DGQ
Sbjct: 239 SRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQ 298
Query: 300 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI 359
CH+ N Y+AS MDYPSL L+ EKL++ NINLIFAVT+N LY+N++ LIPGTTV +
Sbjct: 299 CHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGV 358
Query: 360 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIG 419
L DS N++QLI++AY IRSKVEL V D PE+L+L F ATC + PG + C GLKIG
Sbjct: 359 LSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIG 418
Query: 420 DTASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-G 478
DT SF + + R CP + E F ++PVGF+DSL V VT++C C C EPNS RCN G
Sbjct: 419 DTVSFSIEAKVRGCP-QEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNG 477
Query: 479 SGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFES 538
+GT+ CG+C C PG+LG++CEC + + + Q+ C EG+P+CS RG+C C QC C S
Sbjct: 478 NGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSS 537
Query: 539 EFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRD 598
+FGKI G +CECD+FSC R KG +CSGHG+C CG+C C + + G CNC+T TC +
Sbjct: 538 DFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSN 597
Query: 599 GQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGK-PDNQTC 657
G +CS RG C CG C C +PG++G+ CEKCPTCPDAC+ K++CVEC G D TC
Sbjct: 598 GLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTC 657
Query: 658 HSLCRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNT 717
+ CRDE+ + V + ++AV C YK DCV+ F Y E SGKS L V+ EPEC
Sbjct: 658 NRYCRDEIES-VKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKG 716
Query: 718 PNAMTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKP 777
P+ + +LL+V+G+ILL+GLA L IWKLL+TIHDR+EFAKF+ ER+RA+++ A+NPLY++
Sbjct: 717 PDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEA 776
Query: 778 ISTHTVDFTFNKFNKSYNGT 797
ST T N +Y GT
Sbjct: 777 TSTFT--------NITYRGT 788
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 783 bits (2021), Expect = 0.0
Identities = 375/757 (49%), Positives = 509/757 (67%), Gaps = 15/757 (1%)
Query: 28 CTSGSATSCEECLLIHPKCAWCSKEDFGSPRSITSRCDLRANLVKNGCG-GEIESPASSF 86
C G A +CE+CLLI P+CAWC++E+F P + RCD ANL+ GC IE+P S
Sbjct: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLAKGCQLNFIENPVSQV 82
Query: 87 HVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPVDLYYLMDL 146
+L++ PLS G D++Q+ PQ + + LRPG T Q+ VRQ EDYPVDLYYLMDL
Sbjct: 83 EILKNKPLSV-GRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDL 141
Query: 147 SLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQTNPCIGYK 206
S SM DDL+ I+ LG++L++EM KLTSNFRLGFGSFV+K +SPF T P NPC
Sbjct: 142 SASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIP 201
Query: 207 LFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIGWR 266
F C+P+FGF+H+LPLT+ + FNE V+ Q++S N D PEGGFDA++QAAVCKEKIGWR
Sbjct: 202 YF--CLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWR 259
Query: 267 KDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKL 326
D+LHLLVF +D H +D KL G+V P+DG CHL+ NEY+ S ++YP++ L +KL
Sbjct: 260 NDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKL 319
Query: 327 AENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSIRSKVELSV 386
+NN+ LIFAVT+ LY+N+ LIPG TV +L DS NI+QLII+AY +RS+VEL V
Sbjct: 320 VQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEV 379
Query: 387 WDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHTEHVFALRP 446
E LNL FTA C +G + Q+KC +K+GDTASF V++ C R + H+ ++P
Sbjct: 380 LGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVTVNIPHC-ERRSRHII-IKP 437
Query: 447 VGFRDSLEVGVTYNCTCGCSVGLEPNSARC-NGSGTYVCGLCECSPGYLGTRCECQDGEN 505
VG D+LE+ V+ C C C +E NS++C +G+G++ CG+C C PG++G RCEC GE+
Sbjct: 438 VGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC--GED 495
Query: 506 QSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSG 565
+ + C+EA P CSGRGDC C QC C S +G IYGP+C+CDNFSC R+KG+LC G
Sbjct: 496 M-LSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGG 554
Query: 566 HGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMC 625
+G+C CGEC C +G+ G+ CNC+T +C DG +CS RG C+CG+C CT PGA G C
Sbjct: 555 NGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTC 614
Query: 626 EKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCR--DEVITWVDTIVKDDQEAVLCF 683
E+CPTC D C++KR C+EC L +G+ + C C+ I+ + KD +V C
Sbjct: 615 ERCPTCGDPCNSKRSCIECHLSAAGQA-REECVDKCKLAGATISEEEDFSKDG--SVSCS 671
Query: 684 YKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLALLAIWK 743
+ +C++ F GK+ + + E +C PN I+L V +ILL+G+ LL IWK
Sbjct: 672 LQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWK 731
Query: 744 LLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
LLV+ HDR+E AKF++ERS+A+++ +NPLYR ST
Sbjct: 732 LLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTST 768
>gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]
Length = 801
Score = 653 bits (1684), Expect = 0.0
Identities = 338/773 (43%), Positives = 471/773 (60%), Gaps = 28/773 (3%)
Query: 26 NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSITSRCDLRANLVKNGCG-GEIES 81
N C +A SC EC+ P C WC+ F G P S +RCD L K GC +IE+
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTS--ARCDDLEALKKKGCPPDDIEN 82
Query: 82 PASSFHVLRSLPLSSKGSGSAGW----DVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
P S + ++ ++++ G+A D+ Q+ PQ++ + LR G+ TF L+ ++ EDYP
Sbjct: 83 PRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYP 142
Query: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
+DLYYLMDLS SMKDDL+N++SLGT L EMR++TS+FR+GFGSFV+K + P+ T P
Sbjct: 143 IDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK 202
Query: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
NPC + NC F ++++L LT++ + FNE V KQR+S N D+PEGGFDA++Q A
Sbjct: 203 LRNPCTSEQ---NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVA 259
Query: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
VC IGWR + LLVF+TD H A DGKLGG+V P+DGQCHL E N YT S+ DYP
Sbjct: 260 VCGSLIGWR-NVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYP 317
Query: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
S+A L +KL+ENNI IFAVT+ +YK LIP + V L +S N+IQLII+AYNS
Sbjct: 318 SIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNS 377
Query: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQ--RKCEGLKIGDTASFEVSLEARSCPS 435
+ S+V L E + + + + C++GV+ G+ RKC + IGD FE+S+ + CP
Sbjct: 378 LSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPK 437
Query: 436 RHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-GSGTYVCGLCECSPGYL 494
+ ++ F +RP+GF + +EV + Y C C C P S +C+ G+GT+ CG C C+ G +
Sbjct: 438 KDSDS-FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRV 496
Query: 495 GTRCECQDGE-NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESE-FGKIY-GPFCECD 551
G CEC E N CR+ +CS G+C C QC C + + +IY G FCECD
Sbjct: 497 GRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECD 556
Query: 552 NFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCG 611
NF+C R+ G++C G+G C C C+C+ Y G C+CS D STC +GQIC+ RG C CG
Sbjct: 557 NFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECG 616
Query: 612 QCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDT 671
C+CT+P G+ CE C TC C+ ++CV+C + G+ TC C IT V++
Sbjct: 617 VCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGE-KKDTCTQECSYFNITKVES 675
Query: 672 IVKDDQ-----EAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLA 726
K Q C K DC FTY + + + V+ PEC P+ + I+
Sbjct: 676 RDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAG 735
Query: 727 VVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIS 779
VV I+L+GLALL IWKLL+ IHDRREFAKF+ E+ A+++ NP+Y+ PI+
Sbjct: 736 VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPIN 788
>gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 652 bits (1681), Expect = 0.0
Identities = 337/774 (43%), Positives = 471/774 (60%), Gaps = 28/774 (3%)
Query: 26 NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSITSRCDLRANLVKNGCG-GEIES 81
N C +A SC EC+ P C WC+ F G P S +RCD L K GC +IE+
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTS--ARCDDLEALKKKGCPPDDIEN 82
Query: 82 PASSFHVLRSLPLSSKGSGSAGW----DVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
P S + ++ ++++ G+A D+ Q+ PQ++ + LR G+ TF L+ ++ EDYP
Sbjct: 83 PRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYP 142
Query: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
+DLYYLMDLS SMKDDL+N++SLGT L EMR++TS+FR+GFGSFV+K + P+ T P
Sbjct: 143 IDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK 202
Query: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
NPC + NC F ++++L LT++ + FNE V KQR+S N D+PEGGFDA++Q A
Sbjct: 203 LRNPCTSEQ---NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVA 259
Query: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
VC IGWR + LLVF+TD H A DGKLGG+V P+DGQCHL E N YT S+ DYP
Sbjct: 260 VCGSLIGWR-NVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYP 317
Query: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
S+A L +KL+ENNI IFAVT+ +YK LIP + V L +S N+IQLII+AYNS
Sbjct: 318 SIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNS 377
Query: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQ--RKCEGLKIGDTASFEVSLEARSCPS 435
+ S+V L E + + + + C++GV+ G+ RKC + IGD FE+S+ + CP
Sbjct: 378 LSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPK 437
Query: 436 RHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-GSGTYVCGLCECSPGYL 494
+ ++ F +RP+GF + +EV + Y C C C P S +C+ G+GT+ CG C C+ G +
Sbjct: 438 KDSDS-FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRV 496
Query: 495 GTRCECQDGE-NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESE-FGKIY-GPFCECD 551
G CEC E N CR+ +CS G+C C QC C + + +IY G FCECD
Sbjct: 497 GRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECD 556
Query: 552 NFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCG 611
NF+C R+ G++C G+G C C C+C+ Y G C+CS D STC +GQIC+ RG C CG
Sbjct: 557 NFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECG 616
Query: 612 QCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDT 671
C+CT+P G+ CE C TC C+ ++CV+C + G+ TC C IT V++
Sbjct: 617 VCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGE-KKDTCTQECSYFNITKVES 675
Query: 672 IVKDDQ-----EAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLA 726
K Q C K DC FTY + + + V+ PEC P+ + I+
Sbjct: 676 RDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAG 735
Query: 727 VVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
VV I+L+GLALL IWKLL+ IHDRREFAKF+ E+ A+++ NP+Y+ ++T
Sbjct: 736 VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTT 789
>gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 652 bits (1681), Expect = 0.0
Identities = 337/774 (43%), Positives = 471/774 (60%), Gaps = 28/774 (3%)
Query: 26 NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSITSRCDLRANLVKNGCG-GEIES 81
N C +A SC EC+ P C WC+ F G P S +RCD L K GC +IE+
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTS--ARCDDLEALKKKGCPPDDIEN 82
Query: 82 PASSFHVLRSLPLSSKGSGSAGW----DVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
P S + ++ ++++ G+A D+ Q+ PQ++ + LR G+ TF L+ ++ EDYP
Sbjct: 83 PRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYP 142
Query: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
+DLYYLMDLS SMKDDL+N++SLGT L EMR++TS+FR+GFGSFV+K + P+ T P
Sbjct: 143 IDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK 202
Query: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
NPC + NC F ++++L LT++ + FNE V KQR+S N D+PEGGFDA++Q A
Sbjct: 203 LRNPCTSEQ---NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVA 259
Query: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
VC IGWR + LLVF+TD H A DGKLGG+V P+DGQCHL E N YT S+ DYP
Sbjct: 260 VCGSLIGWR-NVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYP 317
Query: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
S+A L +KL+ENNI IFAVT+ +YK LIP + V L +S N+IQLII+AYNS
Sbjct: 318 SIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNS 377
Query: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQ--RKCEGLKIGDTASFEVSLEARSCPS 435
+ S+V L E + + + + C++GV+ G+ RKC + IGD FE+S+ + CP
Sbjct: 378 LSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPK 437
Query: 436 RHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-GSGTYVCGLCECSPGYL 494
+ ++ F +RP+GF + +EV + Y C C C P S +C+ G+GT+ CG C C+ G +
Sbjct: 438 KDSDS-FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRV 496
Query: 495 GTRCECQDGE-NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESE-FGKIY-GPFCECD 551
G CEC E N CR+ +CS G+C C QC C + + +IY G FCECD
Sbjct: 497 GRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECD 556
Query: 552 NFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCG 611
NF+C R+ G++C G+G C C C+C+ Y G C+CS D STC +GQIC+ RG C CG
Sbjct: 557 NFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECG 616
Query: 612 QCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDT 671
C+CT+P G+ CE C TC C+ ++CV+C + G+ TC C IT V++
Sbjct: 617 VCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGE-KKDTCTQECSYFNITKVES 675
Query: 672 IVKDDQ-----EAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLA 726
K Q C K DC FTY + + + V+ PEC P+ + I+
Sbjct: 676 RDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAG 735
Query: 727 VVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
VV I+L+GLALL IWKLL+ IHDRREFAKF+ E+ A+++ NP+Y+ ++T
Sbjct: 736 VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTT 789
>gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]
Length = 789
Score = 641 bits (1654), Expect = 0.0
Identities = 335/770 (43%), Positives = 466/770 (60%), Gaps = 28/770 (3%)
Query: 26 NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSITSRCDLRANLVKNGCG-GEIES 81
N C +A SC EC+ P C WC+ F G P S +RCD L K GC +IE+
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTS--ARCDDLEALKKKGCPPDDIEN 82
Query: 82 PASSFHVLRSLPLSSKGSGSAGW----DVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
P S + ++ ++++ G+A D+ Q+ PQ++ + LR G+ TF L+ ++ EDYP
Sbjct: 83 PRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYP 142
Query: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
+DLYYLMDLS SMKDDL+N++SLGT L EMR++TS+FR+GFGSFV+K + P+ T P
Sbjct: 143 IDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK 202
Query: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
NPC + NC F ++++L LT++ + FNE V KQR+S N D+PEGGFDA++Q A
Sbjct: 203 LRNPCTSEQ---NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVA 259
Query: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
VC IGWR + LLVF+TD H A DGKLGG+V P+DGQCHL E N YT S+ DYP
Sbjct: 260 VCGSLIGWR-NVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYP 317
Query: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
S+A L +KL+ENNI IFAVT+ +YK LIP + V L +S N+IQLII+AYNS
Sbjct: 318 SIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNS 377
Query: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQ--RKCEGLKIGDTASFEVSLEARSCPS 435
+ S+V L E + + + + C++GV+ G+ RKC + IGD FE+S+ + CP
Sbjct: 378 LSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPK 437
Query: 436 RHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-GSGTYVCGLCECSPGYL 494
+ ++ F +RP+GF + +EV + Y C C C P S +C+ G+GT+ CG C C+ G +
Sbjct: 438 KDSDS-FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRV 496
Query: 495 GTRCECQDGE-NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESE-FGKIY-GPFCECD 551
G CEC E N CR+ +CS G+C C QC C + + +IY G FCECD
Sbjct: 497 GRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECD 556
Query: 552 NFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCG 611
NF+C R+ G++C G+G C C C+C+ Y G C+CS D STC +GQIC+ RG C CG
Sbjct: 557 NFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECG 616
Query: 612 QCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDT 671
C+CT+P G+ CE C TC C+ ++CV+C + G+ TC C IT V++
Sbjct: 617 VCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGE-KKDTCTQECSYFNITKVES 675
Query: 672 IVKDDQ-----EAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLA 726
K Q C K DC FTY + + + V+ PEC P+ + I+
Sbjct: 676 RDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAG 735
Query: 727 VVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRK 776
VV I+L+GLALL IWKLL+ IHDRREFAKF+ E+ A+++ S +K
Sbjct: 736 VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTVSYKTSKK 785
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 640 bits (1650), Expect = 0.0
Identities = 333/761 (43%), Positives = 463/761 (60%), Gaps = 28/761 (3%)
Query: 26 NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSITSRCDLRANLVKNGCG-GEIES 81
N C +A SC EC+ P C WC+ F G P S +RCD L K GC +IE+
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTS--ARCDDLEALKKKGCPPDDIEN 82
Query: 82 PASSFHVLRSLPLSSKGSGSAGW----DVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
P S + ++ ++++ G+A D+ Q+ PQ++ + LR G+ TF L+ ++ EDYP
Sbjct: 83 PRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYP 142
Query: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
+DLYYLMDLS SMKDDL+N++SLGT L EMR++TS+FR+GFGSFV+K + P+ T P
Sbjct: 143 IDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK 202
Query: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
NPC + NC F ++++L LT++ + FNE V KQR+S N D+PEGGFDA++Q A
Sbjct: 203 LRNPCTSEQ---NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVA 259
Query: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
VC IGWR + LLVF+TD H A DGKLGG+V P+DGQCHL E N YT S+ DYP
Sbjct: 260 VCGSLIGWR-NVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYP 317
Query: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
S+A L +KL+ENNI IFAVT+ +YK LIP + V L +S N+IQLII+AYNS
Sbjct: 318 SIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNS 377
Query: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQ--RKCEGLKIGDTASFEVSLEARSCPS 435
+ S+V L E + + + + C++GV+ G+ RKC + IGD FE+S+ + CP
Sbjct: 378 LSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPK 437
Query: 436 RHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-GSGTYVCGLCECSPGYL 494
+ ++ F +RP+GF + +EV + Y C C C P S +C+ G+GT+ CG C C+ G +
Sbjct: 438 KDSDS-FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRV 496
Query: 495 GTRCECQDGE-NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESE-FGKIY-GPFCECD 551
G CEC E N CR+ +CS G+C C QC C + + +IY G FCECD
Sbjct: 497 GRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECD 556
Query: 552 NFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCG 611
NF+C R+ G++C G+G C C C+C+ Y G C+CS D STC +GQIC+ RG C CG
Sbjct: 557 NFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECG 616
Query: 612 QCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDT 671
C+CT+P G+ CE C TC C+ ++CV+C + G+ TC C IT V++
Sbjct: 617 VCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGE-KKDTCTQECSYFNITKVES 675
Query: 672 IVKDDQ-----EAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLA 726
K Q C K DC FTY + + + V+ PEC P+ + I+
Sbjct: 676 RDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAG 735
Query: 727 VVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYE 767
VV I+L+GLALL IWKLL+ IHDRREFAKF+ E+ A+++
Sbjct: 736 VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD 776
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 640 bits (1650), Expect = 0.0
Identities = 333/761 (43%), Positives = 463/761 (60%), Gaps = 28/761 (3%)
Query: 26 NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSITSRCDLRANLVKNGCG-GEIES 81
N C +A SC EC+ P C WC+ F G P S +RCD L K GC +IE+
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTS--ARCDDLEALKKKGCPPDDIEN 82
Query: 82 PASSFHVLRSLPLSSKGSGSAGW----DVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
P S + ++ ++++ G+A D+ Q+ PQ++ + LR G+ TF L+ ++ EDYP
Sbjct: 83 PRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYP 142
Query: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
+DLYYLMDLS SMKDDL+N++SLGT L EMR++TS+FR+GFGSFV+K + P+ T P
Sbjct: 143 IDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK 202
Query: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
NPC + NC F ++++L LT++ + FNE V KQR+S N D+PEGGFDA++Q A
Sbjct: 203 LRNPCTSEQ---NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVA 259
Query: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
VC IGWR + LLVF+TD H A DGKLGG+V P+DGQCHL E N YT S+ DYP
Sbjct: 260 VCGSLIGWR-NVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYP 317
Query: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
S+A L +KL+ENNI IFAVT+ +YK LIP + V L +S N+IQLII+AYNS
Sbjct: 318 SIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNS 377
Query: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQ--RKCEGLKIGDTASFEVSLEARSCPS 435
+ S+V L E + + + + C++GV+ G+ RKC + IGD FE+S+ + CP
Sbjct: 378 LSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPK 437
Query: 436 RHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-GSGTYVCGLCECSPGYL 494
+ ++ F +RP+GF + +EV + Y C C C P S +C+ G+GT+ CG C C+ G +
Sbjct: 438 KDSDS-FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRV 496
Query: 495 GTRCECQDGE-NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESE-FGKIY-GPFCECD 551
G CEC E N CR+ +CS G+C C QC C + + +IY G FCECD
Sbjct: 497 GRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECD 556
Query: 552 NFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCG 611
NF+C R+ G++C G+G C C C+C+ Y G C+CS D STC +GQIC+ RG C CG
Sbjct: 557 NFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECG 616
Query: 612 QCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDT 671
C+CT+P G+ CE C TC C+ ++CV+C + G+ TC C IT V++
Sbjct: 617 VCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGE-KKDTCTQECSYFNITKVES 675
Query: 672 IVKDDQ-----EAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLA 726
K Q C K DC FTY + + + V+ PEC P+ + I+
Sbjct: 676 RDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAG 735
Query: 727 VVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYE 767
VV I+L+GLALL IWKLL+ IHDRREFAKF+ E+ A+++
Sbjct: 736 VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD 776
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 560 bits (1443), Expect = e-159
Identities = 305/770 (39%), Positives = 429/770 (55%), Gaps = 31/770 (4%)
Query: 20 PRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDF-GSPRSITSRCDLRANLVKNGCG-G 77
P L+ L C A SC++C+L HP CAWC + +F S + RC R L+ GC
Sbjct: 37 PHLSMLGSCQP--APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLE 94
Query: 78 EIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
E+E P VL+ PLS G+ G Q+ PQ + V LRPG+ Q++ + E YP
Sbjct: 95 ELEEPRGQQEVLQDQPLSQ---GARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYP 151
Query: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
VDLYYLMDLS SMKDDL+ +R LG L ++++T + R+GFGSFVDK + PF T P
Sbjct: 152 VDLYYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSK 211
Query: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
+PC C F F H+L LT +F EV +Q VS N D+PEGGFDA+LQAA
Sbjct: 212 LRHPCP--TRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAA 269
Query: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
+C+E+IGWR + LLVFT+DD H A DGKLGG+ P DG CHL+ Y+ S + DYP
Sbjct: 270 LCQEQIGWR-NVSRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYP 328
Query: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
S+ + + L+ NI IFAVT +Y+ + LIP + V L DS N++QLI++AYNS
Sbjct: 329 SVGQVAQALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNS 388
Query: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQR----KCEGLKIGDTASFEVSLEARSC 433
+ S V L P +++ + + C+ G+ +C ++I T +F VSL+A C
Sbjct: 389 LSSTVTLEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC 448
Query: 434 PSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARC-NGSGTYVCGLCECSPG 492
H+ LR +GF + L V + C C CS +P + C +G G CG+C C+PG
Sbjct: 449 LPE--PHLLRLRALGFSEELIVELHTLCDCNCS-DTQPQAPHCSDGQGHLQCGVCSCAPG 505
Query: 493 YLGTRCECQDGENQSV-YQNLCREAEGK-PLCSGRGDCSCNQCSCFESEFGKIYGPFCEC 550
LG CEC E S ++ CR G PLCSG+G C C +CSC G+ G CEC
Sbjct: 506 RLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSC----SGQSSGHLCEC 561
Query: 551 DNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLC 610
D+ SC R++G+LC G G C CG C CHA G C CS D+ +C +G +CS G C C
Sbjct: 562 DDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKC 621
Query: 611 GQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVD 670
+CQC + G +G +C++CP C C RDC EC +G P C + C +T
Sbjct: 622 NRCQCLD-GYYGALCDQCPGCKTPCERHRDCAECGAFRTG-PLATNCSTACAHTNVTLAL 679
Query: 671 TIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGS 730
+ DD C +T + +F ++ + + + P+ + I+L VG
Sbjct: 680 APILDDG---WCKERTLDN--QLFFFLVEDDARGTVVLRVRPQEKGADHTQAIVLGCVGG 734
Query: 731 ILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
I+ VGL L+ ++L V I+DRRE+++F+ E+ + ++ SNPLY+ I+T
Sbjct: 735 IVAVGLGLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITT 784
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 532 bits (1371), Expect = e-151
Identities = 304/789 (38%), Positives = 414/789 (52%), Gaps = 49/789 (6%)
Query: 12 LLGLCALLPRLAGL--------NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSI 60
+LGL L L GL CT +SC EC+ P C WC K +F G P SI
Sbjct: 1 MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI 60
Query: 61 TSRCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLR 119
RCD R L+ GC + I P S K Q++PQ++ + LR
Sbjct: 61 --RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQK----------QLSPQKVTLYLR 108
Query: 120 PGDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGF 179
PG F + R+ + YP+DLYYLMDLS SM DDL N++ LG L + ++T + R+GF
Sbjct: 109 PGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGF 168
Query: 180 GSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRV 239
GSFVDK + PF T P NPC + C P F FRH+L LT+ + F EV KQ +
Sbjct: 169 GSFVDKTVLPFVNTHPDKLRNPCPNKE--KECQPPFAFRHVLKLTNNSNQFQTEVGKQLI 226
Query: 240 SRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQ 299
S N DAPEGG DA++Q A C E+IGWR + LLVF TDD H A DGKLG ++ P+DG+
Sbjct: 227 SGNLDAPEGGLDAMMQVAACPEEIGWR-NVTRLLVFATDDGFHFAGDGKLGAILTPNDGR 285
Query: 300 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI 359
CHL E N Y SN+ DYPS+ L KLAENNI IFAVT Y+ T +IP + V
Sbjct: 286 CHL-EDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGE 344
Query: 360 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRK--CEGLK 417
L DS N++QLI NAYN + S+V L P+ L + + + C +GV++ Q + C+G++
Sbjct: 345 LSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQ 404
Query: 418 IGDTASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN 477
I +F+V + A C E F +R +GF D + V V C C C S C+
Sbjct: 405 INVPITFQVKVTATECIQ---EQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSL-CH 460
Query: 478 GSGTYVCGLCECSPGYLGTRCECQ-DGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCF 536
G G CG+C C GY+G CECQ G + + CR+ +CSG GDC C QC C
Sbjct: 461 GKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCH 520
Query: 537 ESEF-GK-IYGPFCECDNFSCARNKGVLCSGHGE--CHCGECKCHAGYIGDNCNCSTDIS 592
S+ GK IYG +CECD +C R G +C G G C CG+C+CH G+ G C C
Sbjct: 521 TSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTE 580
Query: 593 TCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKP 652
C CS RG C C C+C G +C++CP CP C C ECL G P
Sbjct: 581 GCLNPRRVECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKG-P 638
Query: 653 DNQTCHSLCRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREP 712
+ C + C ++ + + C + ++ C + +T + L + E
Sbjct: 639 FGKNCSAACPGLQLS------NNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDES 692
Query: 713 -ECGNTPNAMTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASN 771
EC PN I+ V I+L+G+ LL IWK L+ + D RE+ +F+ E+ ++++ N
Sbjct: 693 RECVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN-NDN 751
Query: 772 PLYRKPIST 780
PL++ +T
Sbjct: 752 PLFKSATTT 760
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 532 bits (1371), Expect = e-151
Identities = 304/789 (38%), Positives = 414/789 (52%), Gaps = 49/789 (6%)
Query: 12 LLGLCALLPRLAGL--------NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSI 60
+LGL L L GL CT +SC EC+ P C WC K +F G P SI
Sbjct: 1 MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI 60
Query: 61 TSRCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLR 119
RCD R L+ GC + I P S K Q++PQ++ + LR
Sbjct: 61 --RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQK----------QLSPQKVTLYLR 108
Query: 120 PGDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGF 179
PG F + R+ + YP+DLYYLMDLS SM DDL N++ LG L + ++T + R+GF
Sbjct: 109 PGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGF 168
Query: 180 GSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRV 239
GSFVDK + PF T P NPC + C P F FRH+L LT+ + F EV KQ +
Sbjct: 169 GSFVDKTVLPFVNTHPDKLRNPCPNKE--KECQPPFAFRHVLKLTNNSNQFQTEVGKQLI 226
Query: 240 SRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQ 299
S N DAPEGG DA++Q A C E+IGWR + LLVF TDD H A DGKLG ++ P+DG+
Sbjct: 227 SGNLDAPEGGLDAMMQVAACPEEIGWR-NVTRLLVFATDDGFHFAGDGKLGAILTPNDGR 285
Query: 300 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI 359
CHL E N Y SN+ DYPS+ L KLAENNI IFAVT Y+ T +IP + V
Sbjct: 286 CHL-EDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGE 344
Query: 360 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRK--CEGLK 417
L DS N++QLI NAYN + S+V L P+ L + + + C +GV++ Q + C+G++
Sbjct: 345 LSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQ 404
Query: 418 IGDTASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN 477
I +F+V + A C E F +R +GF D + V V C C C S C+
Sbjct: 405 INVPITFQVKVTATECIQ---EQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSL-CH 460
Query: 478 GSGTYVCGLCECSPGYLGTRCECQ-DGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCF 536
G G CG+C C GY+G CECQ G + + CR+ +CSG GDC C QC C
Sbjct: 461 GKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCH 520
Query: 537 ESEF-GK-IYGPFCECDNFSCARNKGVLCSGHGE--CHCGECKCHAGYIGDNCNCSTDIS 592
S+ GK IYG +CECD +C R G +C G G C CG+C+CH G+ G C C
Sbjct: 521 TSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTE 580
Query: 593 TCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKP 652
C CS RG C C C+C G +C++CP CP C C ECL G P
Sbjct: 581 GCLNPRRVECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKG-P 638
Query: 653 DNQTCHSLCRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREP 712
+ C + C ++ + + C + ++ C + +T + L + E
Sbjct: 639 FGKNCSAACPGLQLS------NNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDES 692
Query: 713 -ECGNTPNAMTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASN 771
EC PN I+ V I+L+G+ LL IWK L+ + D RE+ +F+ E+ ++++ N
Sbjct: 693 RECVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN-NDN 751
Query: 772 PLYRKPIST 780
PL++ +T
Sbjct: 752 PLFKSATTT 760
>gi|4504779 integrin, beta 8 precursor [Homo sapiens]
Length = 769
Score = 508 bits (1308), Expect = e-144
Identities = 251/627 (40%), Positives = 373/627 (59%), Gaps = 26/627 (4%)
Query: 26 NICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSITSRCDLRANLVKNGCGGE-IESPAS 84
N C S +A SC CL + P+C WC +EDF S S + RCD+ +NL+ GC + IE P
Sbjct: 45 NRCASSNAASCARCLALGPECGWCVQEDFISGGSRSERCDIVSNLISKGCSVDSIEYP-- 102
Query: 85 SFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPVDLYYLM 144
S HV+ +P ++ + Q+TP E+++ LRPG + F L+V ++ YPVDLYYL+
Sbjct: 103 SVHVI--IPTENEIN-------TQVTPGEVSIQLRPGAEANFMLKVHPLKKYPVDLYYLV 153
Query: 145 DLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQTNPCIG 204
D+S SM ++++ + S+G L+ +M + +FRLGFGS+VDK +SP+ P N C
Sbjct: 154 DVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIHPERIHNQCSD 213
Query: 205 YKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIG 264
Y L +C+P G+ H+L LT+ + F + V +Q++S N D PEGGFDA+LQAAVC+ IG
Sbjct: 214 YNL--DCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIG 271
Query: 265 WRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGE 324
WRK+A LL+ TD H+ALD KL G+V P+DG CHL N Y S M++PSL L E
Sbjct: 272 WRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN-NVYVKSTTMEHPSLGQLSE 330
Query: 325 KLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSIRSKVEL 384
KL +NNIN+IFAV + YK+ L+PGT ++ + N+ L++ AY + S+V++
Sbjct: 331 KLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEAYQKLISEVKV 390
Query: 385 SVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHTEHVFAL 444
V +Q + + TA C DG PG C + D F V++ + C ++ +
Sbjct: 391 QVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFNVTVTMKKCDVTGGKNYAII 450
Query: 445 RPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLC-ECSPGYLGTRCECQDG 503
+P+GF ++ ++ + NC+C C P +C T++ C +C +C
Sbjct: 451 KPIGFNETAKIHIHRNCSCQCEDNRGP-KGKCVDE-TFLDSKCFQCDEN------KCHFD 502
Query: 504 ENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLC 563
E+Q ++ C+ + +P+CSGRG C C +CSC + + GK+YG +CE D+FSC + G LC
Sbjct: 503 EDQFSSES-CKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLC 561
Query: 564 SGHGECHCGECKCHAGYIGDNCNC-STDISTCRGRDGQICSERGHCLCGQCQCTEPGAFG 622
+GHGEC G C+C +G+ GD C C S C GQ+CS RG C+CG+C+CT+P + G
Sbjct: 562 AGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIG 621
Query: 623 EMCEKCPTCPDACSTKRDCVECLLLHS 649
CE CPTC AC +C++CL H+
Sbjct: 622 RFCEHCPTCYTACKENWNCMQCLHPHN 648
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 436 bits (1120), Expect = e-122
Identities = 273/768 (35%), Positives = 390/768 (50%), Gaps = 68/768 (8%)
Query: 5 PAPLYACLLGLCALLPRLAGL--NICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSITS 62
P+P +A LL + L+G N C SC EC+ + CA+C+ E F
Sbjct: 6 PSP-WARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFRD-----R 59
Query: 63 RCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPG 121
RC+ +A L+ GC E I SSF + + + S QM+PQ + V LRPG
Sbjct: 60 RCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRS------QMSPQGLRVRLRPG 113
Query: 122 DKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGS 181
++ F+L+V + + PVDLY LMD S SM DDLDN++ +G LA + +LTS++ +GFG
Sbjct: 114 EERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGK 173
Query: 182 FVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSR 241
FVDK P + P P +PN P F F++++ LT+ VD F +++ +R+S
Sbjct: 174 FVDKVSVPQTDMRPEKLKEP------WPNSDPPFSFKNVISLTEDVDEFRNKLQGERISG 227
Query: 242 NRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGK--LGGLVQPHDGQ 299
N DAPEGGFDA+LQ AVC IGWR D+ HLLVF+T+ H DG L G++ +D +
Sbjct: 228 NLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDER 287
Query: 300 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI 359
CHL+ YT DYPS+ L LA++NI IFAVT Y Y+ P +++ +
Sbjct: 288 CHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGV 347
Query: 360 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEG---L 416
L DS NI++L+ A+N IRS +++ D P L T S Q+ G +
Sbjct: 348 LQEDSSNIVELLEEAFNRIRSNLDIRALDSPRGLRTEVT-------SKMFQKTRTGSFHI 400
Query: 417 KIGDTASFEVSLEARSCPSRHTEHV---------------FALRPVGFRDSLEVGVTYNC 461
+ G+ ++V L A EHV L+P F D L++ C
Sbjct: 401 RRGEVGIYQVQLRA-------LEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIIC 452
Query: 462 -TCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKP 520
C C + E SARC+ +G +VCG C CS G+ G C C G + Q RE E KP
Sbjct: 453 DVCTCELQKEVRSARCSFNGDFVCGQCVCSEGWSGQTCNCSTGSLSDI-QPCLREGEDKP 511
Query: 521 LCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGY 580
CSGRG+C C C C+ G+ G FCE DNF C R G LC+ G C G+C C G+
Sbjct: 512 -CSGRGECQCGHCVCYGE--GRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGW 568
Query: 581 IGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGE-MCE--KCPTCPDACST 637
G +C+C +TC +G IC+ RGHC CG+C C + + + +CE P C
Sbjct: 569 TGPSCDCPLSNATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCED 628
Query: 638 KRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQEAVLCFYKTA-KDCVMMFTY 696
R CV+C +G+ +TC C +V VD + + ++ V C ++ DC +T
Sbjct: 629 LRSCVQCQAWGTGEKKGRTCEE-CNFKV-KMVDELKRAEEVVVRCSFRDEDDDCTYSYTM 686
Query: 697 VELPSGKSNLTVLREPECGNTPNAMTILLAVVGSIL-LVGLALLAIWK 743
+ N TVL + P + L+ ++ +L L+ L LL WK
Sbjct: 687 EGDGAPGPNSTVLVHKKKDCPPGSFWWLIPLLLLLLPLLALLLLLCWK 734
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 436 bits (1120), Expect = e-122
Identities = 273/768 (35%), Positives = 390/768 (50%), Gaps = 68/768 (8%)
Query: 5 PAPLYACLLGLCALLPRLAGL--NICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSITS 62
P+P +A LL + L+G N C SC EC+ + CA+C+ E F
Sbjct: 6 PSP-WARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFRD-----R 59
Query: 63 RCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPG 121
RC+ +A L+ GC E I SSF + + + S QM+PQ + V LRPG
Sbjct: 60 RCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRS------QMSPQGLRVRLRPG 113
Query: 122 DKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGS 181
++ F+L+V + + PVDLY LMD S SM DDLDN++ +G LA + +LTS++ +GFG
Sbjct: 114 EERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGK 173
Query: 182 FVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSR 241
FVDK P + P P +PN P F F++++ LT+ VD F +++ +R+S
Sbjct: 174 FVDKVSVPQTDMRPEKLKEP------WPNSDPPFSFKNVISLTEDVDEFRNKLQGERISG 227
Query: 242 NRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGK--LGGLVQPHDGQ 299
N DAPEGGFDA+LQ AVC IGWR D+ HLLVF+T+ H DG L G++ +D +
Sbjct: 228 NLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDER 287
Query: 300 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI 359
CHL+ YT DYPS+ L LA++NI IFAVT Y Y+ P +++ +
Sbjct: 288 CHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGV 347
Query: 360 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEG---L 416
L DS NI++L+ A+N IRS +++ D P L T S Q+ G +
Sbjct: 348 LQEDSSNIVELLEEAFNRIRSNLDIRALDSPRGLRTEVT-------SKMFQKTRTGSFHI 400
Query: 417 KIGDTASFEVSLEARSCPSRHTEHV---------------FALRPVGFRDSLEVGVTYNC 461
+ G+ ++V L A EHV L+P F D L++ C
Sbjct: 401 RRGEVGIYQVQLRA-------LEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIIC 452
Query: 462 -TCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKP 520
C C + E SARC+ +G +VCG C CS G+ G C C G + Q RE E KP
Sbjct: 453 DVCTCELQKEVRSARCSFNGDFVCGQCVCSEGWSGQTCNCSTGSLSDI-QPCLREGEDKP 511
Query: 521 LCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGY 580
CSGRG+C C C C+ G+ G FCE DNF C R G LC+ G C G+C C G+
Sbjct: 512 -CSGRGECQCGHCVCYGE--GRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGW 568
Query: 581 IGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGE-MCE--KCPTCPDACST 637
G +C+C +TC +G IC+ RGHC CG+C C + + + +CE P C
Sbjct: 569 TGPSCDCPLSNATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCED 628
Query: 638 KRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQEAVLCFYKTA-KDCVMMFTY 696
R CV+C +G+ +TC C +V VD + + ++ V C ++ DC +T
Sbjct: 629 LRSCVQCQAWGTGEKKGRTCEE-CNFKV-KMVDELKRAEEVVVRCSFRDEDDDCTYSYTM 686
Query: 697 VELPSGKSNLTVLREPECGNTPNAMTILLAVVGSIL-LVGLALLAIWK 743
+ N TVL + P + L+ ++ +L L+ L LL WK
Sbjct: 687 EGDGAPGPNSTVLVHKKKDCPPGSFWWLIPLLLLLLPLLALLLLLCWK 734
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 436 bits (1120), Expect = e-122
Identities = 273/768 (35%), Positives = 390/768 (50%), Gaps = 68/768 (8%)
Query: 5 PAPLYACLLGLCALLPRLAGL--NICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSITS 62
P+P +A LL + L+G N C SC EC+ + CA+C+ E F
Sbjct: 6 PSP-WARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFRD-----R 59
Query: 63 RCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPG 121
RC+ +A L+ GC E I SSF + + + S QM+PQ + V LRPG
Sbjct: 60 RCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRS------QMSPQGLRVRLRPG 113
Query: 122 DKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGS 181
++ F+L+V + + PVDLY LMD S SM DDLDN++ +G LA + +LTS++ +GFG
Sbjct: 114 EERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGK 173
Query: 182 FVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSR 241
FVDK P + P P +PN P F F++++ LT+ VD F +++ +R+S
Sbjct: 174 FVDKVSVPQTDMRPEKLKEP------WPNSDPPFSFKNVISLTEDVDEFRNKLQGERISG 227
Query: 242 NRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGK--LGGLVQPHDGQ 299
N DAPEGGFDA+LQ AVC IGWR D+ HLLVF+T+ H DG L G++ +D +
Sbjct: 228 NLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDER 287
Query: 300 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI 359
CHL+ YT DYPS+ L LA++NI IFAVT Y Y+ P +++ +
Sbjct: 288 CHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGV 347
Query: 360 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEG---L 416
L DS NI++L+ A+N IRS +++ D P L T S Q+ G +
Sbjct: 348 LQEDSSNIVELLEEAFNRIRSNLDIRALDSPRGLRTEVT-------SKMFQKTRTGSFHI 400
Query: 417 KIGDTASFEVSLEARSCPSRHTEHV---------------FALRPVGFRDSLEVGVTYNC 461
+ G+ ++V L A EHV L+P F D L++ C
Sbjct: 401 RRGEVGIYQVQLRA-------LEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIIC 452
Query: 462 -TCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKP 520
C C + E SARC+ +G +VCG C CS G+ G C C G + Q RE E KP
Sbjct: 453 DVCTCELQKEVRSARCSFNGDFVCGQCVCSEGWSGQTCNCSTGSLSDI-QPCLREGEDKP 511
Query: 521 LCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGY 580
CSGRG+C C C C+ G+ G FCE DNF C R G LC+ G C G+C C G+
Sbjct: 512 -CSGRGECQCGHCVCYGE--GRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGW 568
Query: 581 IGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGE-MCE--KCPTCPDACST 637
G +C+C +TC +G IC+ RGHC CG+C C + + + +CE P C
Sbjct: 569 TGPSCDCPLSNATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCED 628
Query: 638 KRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQEAVLCFYKTA-KDCVMMFTY 696
R CV+C +G+ +TC C +V VD + + ++ V C ++ DC +T
Sbjct: 629 LRSCVQCQAWGTGEKKGRTCEE-CNFKV-KMVDELKRAEEVVVRCSFRDEDDDCTYSYTM 686
Query: 697 VELPSGKSNLTVLREPECGNTPNAMTILLAVVGSIL-LVGLALLAIWK 743
+ N TVL + P + L+ ++ +L L+ L LL WK
Sbjct: 687 EGDGAPGPNSTVLVHKKKDCPPGSFWWLIPLLLLLLPLLALLLLLCWK 734
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 130 bits (328), Expect = 4e-30
Identities = 65/181 (35%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 476 CNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNL--CREAEGKPLCSGRGDCSCNQC 533
C+G G CG C+C G+ G +CE S +++ C+ + P CSGRG C C +C
Sbjct: 288 CSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLP-CSGRGKCECGKC 346
Query: 534 SCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGD------NCNC 587
+C+ ++YG CECD+ C GV+C GHG C CG C C G+ G CN
Sbjct: 347 TCYPPGDRRVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNM 406
Query: 588 STDIS--TCRGRDGQICSERGHCLCGQCQCTEPGAF--GEMCEKCPTCPDACSTKRDCVE 643
+ + S C DG +CS +G C CG+C C+ + GE C+ C D K D +
Sbjct: 407 TEEQSKNLCESADGILCSGKGSCHCGKCICSAEEWYISGEFCD----CDDRDCDKHDGLI 462
Query: 644 C 644
C
Sbjct: 463 C 463
Score = 129 bits (323), Expect = 1e-29
Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 454 EVGVTYNCTCGCS--VGLEPNSARCNGSGTYVCGLCECSPGYLGTRCE----CQDGENQS 507
E G+ + C C V + + C G G CG C+C G+ G C+ C + +S
Sbjct: 80 EPGMFFGPLCECHEWVCETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKS 139
Query: 508 VYQNLCREAEGKPLCSGRGDCSCNQCSCFESE-FGKIYGPFCECDNFSCARNKGV-LCSG 565
+C+ ++ +CS G C C +C C S+ G +YG FCECD+ C ++ +C G
Sbjct: 140 --NQMCKNSQDI-ICSNAGTCHCGRCKCDNSDGSGLVYGKFCECDDRECIDDETEEICGG 196
Query: 566 HGECHCGECKCHAGYIGDNCNCSTDIS------TCRGRDGQICSERGHCLCGQCQCTEPG 619
HG+C+CG C C AG+ GD C DI+ C DG+ICS RG C+CG+C C +
Sbjct: 197 HGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGECTCHDVD 256
Query: 620 AFGEMCEKCPTCPDACS-TKRDC 641
G+ + D C +RDC
Sbjct: 257 PTGDWGD---IHGDTCECDERDC 276
Score = 111 bits (277), Expect = 3e-24
Identities = 57/161 (35%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 495 GTRCECQDGENQSVYQNLCREAEGKP----LCSGRGDCSCNQCSCFESEFGKIYGPFCEC 550
G C E++ CR A G+P LC GRG C C C C +E G +GP CEC
Sbjct: 37 GAACRLSRAESE----RRCR-APGQPPGAALCHGRGRCDCGVCICHVTEPGMFFGPLCEC 91
Query: 551 DNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDI--------STCRGRDGQIC 602
+ C G C+GHG+C CG+CKC G+ GD C T+ C+ IC
Sbjct: 92 HEWVCETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIIC 151
Query: 603 SERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVE 643
S G C CG+C+C G + K C D R+C++
Sbjct: 152 SNAGTCHCGRCKCDNSDGSGLVYGKFCECDD-----RECID 187
Score = 106 bits (265), Expect = 7e-23
Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 459 YNCTCGCSVGL--EPNSARCNGSGTYVCGLCECSPGYLGTRCE----CQDGENQSVYQNL 512
Y TC C + + C G GT CG C C G+ G C+ C E QS +NL
Sbjct: 357 YGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQS--KNL 414
Query: 513 CREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCG 572
C A+G LCSG+G C C +C C E+ I G FC+CD+ C ++ G++C+G+G C CG
Sbjct: 415 CESADGI-LCSGKGSCHCGKCICSAEEW-YISGEFCDCDDRDCDKHDGLICTGNGICSCG 472
Query: 573 ECKCHAGYIGDNC 585
C+C G+ G+ C
Sbjct: 473 NCECWDGWNGNAC 485
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 93.6 bits (231), Expect = 7e-19
Identities = 76/242 (31%), Positives = 97/242 (40%), Gaps = 62/242 (25%)
Query: 451 DSLEVGVTYNCTCGCSVGLEPNSAR------CNGSGTYV---CGLCECSPGYLGTRCE-- 499
++L + CT G L+P + R C+G G + CG C C PG+ G C
Sbjct: 130 ENLVSSLREQCTAGAGCCLQPATGRLDTRPFCSGRGNFSTEGCG-CVCEPGWKGPNCSEP 188
Query: 500 -----------CQDGE---NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYG 545
C DG+ + C + C+ +G C C CFE G
Sbjct: 189 ECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAG---- 244
Query: 546 PFCECDNFSCARNKGVLCSG-HGECHCGECKCHAGYIGDNCNCSTDISTC--RGR----- 597
+C C V CS HG C G C CH G+ GD+CN ++ C RGR
Sbjct: 245 --ADCSREICP----VPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENE 298
Query: 598 -------DGQICSE---------RGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDC 641
G+ CSE RG C+ G C C E G GE C K PTCP AC T+ C
Sbjct: 299 CVCDEGFTGEDCSELICPNDCFDRGRCINGTCYC-EEGFTGEDCGK-PTCPHACHTQGRC 356
Query: 642 VE 643
E
Sbjct: 357 EE 358
Score = 79.7 bits (195), Expect = 1e-14
Identities = 59/189 (31%), Positives = 77/189 (40%), Gaps = 28/189 (14%)
Query: 465 CSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCS- 523
CS + PN C G + G C C G+ G C + Q C E G+ +C
Sbjct: 310 CSELICPND--CFDRGRCINGTCYCEEGFTGEDCGKPTCPHACHTQGRCEE--GQCVCDE 365
Query: 524 --GRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVL-----CSGHGECHCGECKC 576
DCS +C G+ CECD+ + G L CSGHG C G+C C
Sbjct: 366 GFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVC 425
Query: 577 HAGYIGDNCN---CSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPD 633
GY G++C+ C D C RG C+ G+C C E G G C +CP+
Sbjct: 426 DEGYTGEDCSQLRCPND-----------CHSRGRCVEGKCVC-EQGFKGYDCSDM-SCPN 472
Query: 634 ACSTKRDCV 642
C CV
Sbjct: 473 DCHQHGRCV 481
Score = 79.3 bits (194), Expect = 1e-14
Identities = 61/207 (29%), Positives = 83/207 (40%), Gaps = 39/207 (18%)
Query: 465 CSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSG 524
CS PN C+ G V G+C C GY G C R+ + CS
Sbjct: 465 CSDMSCPND--CHQHGRCVNGMCVCDDGYTGEDC---------------RDRQCPRDCSN 507
Query: 525 RGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDN 584
RG C QC C + G +C SC + C G G C G+C CH G++G +
Sbjct: 508 RGLCVDGQCVCEDGFTGP------DCAELSCPND----CHGQGRCVNGQCVCHEGFMGKD 557
Query: 585 CNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVEC 644
C S C G +G C+ GQC C E G G C + +CP C+ CV
Sbjct: 558 CKEQRCPSDCHG--------QGRCVDGQCICHE-GFTGLDCGQ-HSCPSDCNNLGQCVSG 607
Query: 645 LLLHSGKPDNQTCHSLC--RDEVITWV 669
+ + + C + +D V+T V
Sbjct: 608 RCICNEGYSGEDCSEVSPPKDLVVTEV 634
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 87.4 bits (215), Expect = 5e-17
Identities = 55/162 (33%), Positives = 69/162 (42%), Gaps = 31/162 (19%)
Query: 476 CNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSC 535
C+G+G V G C C PG+LG C A LCSG G S +C C
Sbjct: 522 CHGNGECVSGTCHCFPGFLGPDCS---------------RAACPVLCSGNGQYSKGRCLC 566
Query: 536 FESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCR 595
F G C+ C + C G G C G C C++GY G++C + I
Sbjct: 567 FSGW----KGTECDVPTTQCIDPQ---CGGRGICIMGSCACNSGYKGESCEEADCIDPG- 618
Query: 596 GRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPT-CPDACS 636
CS G C+ G+C C+ PG G CE T CPD CS
Sbjct: 619 ------CSNHGVCIHGECHCS-PGWGGSNCEILKTMCPDQCS 653
Score = 79.7 bits (195), Expect = 1e-14
Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 43/196 (21%)
Query: 456 GVTYNCTCGCSVGLEPNSAR--------CNGSGTYVCGLCECSPGYLGTRCECQDGENQS 507
G+ +C C+ G + S C+ G + G C CSPG+ G+ CE
Sbjct: 591 GICIMGSCACNSGYKGESCEEADCIDPGCSNHGVCIHGECHCSPGWGGSNCE-------- 642
Query: 508 VYQNLCREAEGKPLCSGRGDC--SCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSG 565
+ + +C + CSG G C+C + G +C N C+ V C
Sbjct: 643 ILKTMCPDQ-----CSGHGTYLQESGSCTCDPNWTGP------DCSNEICS----VDCGS 687
Query: 566 HGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMC 625
HG C G C+C G+ G CN C R C+E G C G+C+C++ G GE C
Sbjct: 688 HGVCMGGTCRCEEGWTGPACN----QRACHPR----CAEHGTCKDGKCECSQ-GWNGEHC 738
Query: 626 EKCPTCPDACSTKRDC 641
CP C++ C
Sbjct: 739 -TIEGCPGLCNSNGRC 753
Score = 53.1 bits (126), Expect = 1e-06
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 35/119 (29%)
Query: 555 CARNKGVLCSGHGECHCGECKCHAGYIGDNCN-------CS------------------- 588
C RN C G+GEC G C C G++G +C+ CS
Sbjct: 518 CPRN----CHGNGECVSGTCHCFPGFLGPDCSRAACPVLCSGNGQYSKGRCLCFSGWKGT 573
Query: 589 -TDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCV--EC 644
D+ T + D Q C RG C+ G C C G GE CE+ CS C+ EC
Sbjct: 574 ECDVPTTQCIDPQ-CGGRGICIMGSCACNS-GYKGESCEEADCIDPGCSNHGVCIHGEC 630
Score = 31.6 bits (70), Expect = 3.0
Identities = 41/166 (24%), Positives = 54/166 (32%), Gaps = 47/166 (28%)
Query: 387 WDQPEDLNLFFTATC-QDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHTEHVFALR 445
W P+ N + C GV G +CE G + R+C R EH
Sbjct: 671 WTGPDCSNEICSVDCGSHGVCMGGTCRCEEGWTGPACN------QRACHPRCAEH----- 719
Query: 446 PVGFRDSLEVGVTYNCTCGCSVG-------LEPNSARCNGSGTYVCGL------CECSPG 492
G + C CS G +E CN +G C L C C PG
Sbjct: 720 ----------GTCKDGKCECSQGWNGEHCTIEGCPGLCNSNGR--CTLDQNGWHCVCQPG 767
Query: 493 YLGTRCECQDGENQSVYQNLC---REAEGKPLCSGRGDCSCNQCSC 535
+ G C+ + LC ++ EG L C Q SC
Sbjct: 768 WRGAGCDV-------AMETLCTDSKDNEGDGLIDCMDPDCCLQSSC 806
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 85.1 bits (209), Expect = 2e-16
Identities = 56/164 (34%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 476 CNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSC 535
C+G+G V G+C C PG+LG C +A LCSG G S C C
Sbjct: 580 CHGNGECVSGVCHCFPGFLGADCA---------------KAACPVLCSGNGQYSKGTCQC 624
Query: 536 FESEFGKIYGPFCECDNFSCARNKGV--LCSGHGECHCGECKCHAGYIGDNCNCSTDIST 593
+ G ECD N+ + C GHG C G C C AGY G++C +
Sbjct: 625 YSGWKG------AECD---VPMNQCIDPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCLD- 674
Query: 594 CRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPT-CPDACS 636
CS G C+ G+C C+ PG G CE CPD CS
Sbjct: 675 ------PTCSSHGVCVNGECLCS-PGWGGLNCELARVQCPDQCS 711
Score = 64.3 bits (155), Expect = 4e-10
Identities = 66/227 (29%), Positives = 83/227 (36%), Gaps = 56/227 (24%)
Query: 437 HTEHVFALRPVGFRDSLEVGVTYNCTCGCSVG---LEPNSAR------CNGSGTYV--CG 485
H E V L P GV N C CS G L AR C+G GTY+ G
Sbjct: 666 HCEEVDCLDPT----CSSHGVCVNGECLCSPGWGGLNCELARVQCPDQCSGHGTYLPDTG 721
Query: 486 LCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYG 545
LC C P ++G C + +C C G C C C E G
Sbjct: 722 LCSCDPNWMGPDCSVE----------VCSVD-----CGTHGVCIGGACRCEEGWTG---- 762
Query: 546 PFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSER 605
CD C C HG C G+C+C G+ G++C I C +C+
Sbjct: 763 --AACDQRVCHPR----CIEHGTCKDGKCECREGWNGEHCT----IDGC----PDLCNGN 808
Query: 606 GHCLCG----QCQCTEPGAFGEMCEKC--PTCPDACSTKRD-CVECL 645
G C G QC C + G G C +C D + D V+CL
Sbjct: 809 GRCTLGQNSWQCVC-QTGWRGPGCNVAMETSCADNKDNEGDGLVDCL 854
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 84.0 bits (206), Expect = 5e-16
Identities = 64/203 (31%), Positives = 71/203 (34%), Gaps = 57/203 (28%)
Query: 461 CTCGCSVGL------EPNSAR----------------CNGSGTYVCGLCECSPGYLGTRC 498
CTC C G +P A CN G V G C C PGY G C
Sbjct: 154 CTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCVRGRCVCFPGYTGPSC 213
Query: 499 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN 558
C GRG C C C G +C SC R
Sbjct: 214 GWPSCPGD---------------CQGRGRCVQGVCVCRAGFSGP------DCSQRSCPRG 252
Query: 559 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP 618
CS G C G C C GY GD+C S RG CS+RG C G+C C P
Sbjct: 253 ----CSQRGRCEGGRCVCDPGYTGDDCGMR---SCPRG-----CSQRGRCENGRCVC-NP 299
Query: 619 GAFGEMCEKCPTCPDACSTKRDC 641
G GE C +CP CS + C
Sbjct: 300 GYTGEDC-GVRSCPRGCSQRGRC 321
Score = 83.2 bits (204), Expect = 9e-16
Identities = 71/248 (28%), Positives = 89/248 (35%), Gaps = 57/248 (22%)
Query: 461 CTC-----GCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC-------------ECQD 502
C C G G+ CN G G C C PGY GT C C++
Sbjct: 388 CICDTGYSGDDCGVRSCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCRGRGRCEN 447
Query: 503 GE---NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFC---------EC 550
G N C C GRG C +C C+ G+ G C
Sbjct: 448 GVCVCNAGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGDCRGRGRC 507
Query: 551 DNFSCARNKGVL------------CSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRD 598
+ C N G C GHG C G C C AGY G++C+ + CRG
Sbjct: 508 VDGRCVCNPGFTGEDCGSRRCPGDCRGHGLCEDGVCVCDAGYSGEDCSTRSCPGGCRG-- 565
Query: 599 GQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVE--CLLLHSGKPDN-- 654
RG CL G+C C E G GE C CP+ CS C + C+ ++
Sbjct: 566 ------RGQCLDGRCVC-EDGYSGEDC-GVRQCPNDCSQHGVCQDGVCICWEGYVSEDCS 617
Query: 655 -QTCHSLC 661
+TC S C
Sbjct: 618 IRTCPSNC 625
Score = 80.9 bits (198), Expect = 4e-15
Identities = 60/208 (28%), Positives = 78/208 (37%), Gaps = 41/208 (19%)
Query: 461 CTC-----GCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCE-------------CQD 502
C C G G C G G V G C C+PG+ G C C+D
Sbjct: 481 CMCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPGDCRGHGLCED 540
Query: 503 GE---NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNK 559
G + C C GRG C +C C + G+ +C C +
Sbjct: 541 GVCVCDAGYSGEDCSTRSCPGGCRGRGQCLDGRCVCEDGYSGE------DCGVRQCPND- 593
Query: 560 GVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPG 619
CS HG C G C C GY+ ++C+ T S C G RG C G+C C +PG
Sbjct: 594 ---CSQHGVCQDGVCICWEGYVSEDCSIRTCPSNCHG--------RGRCEEGRCLC-DPG 641
Query: 620 AFGEMCEKCPTCPDACSTKRDCVECLLL 647
G C CP C + CV+ + L
Sbjct: 642 YTGPTC-ATRMCPADCRGRGRCVQGVCL 668
Score = 76.6 bits (187), Expect = 8e-14
Identities = 56/198 (28%), Positives = 76/198 (38%), Gaps = 33/198 (16%)
Query: 461 CTC-----GCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCRE 515
C C G G+ C+ G G C C+PGY G C + + C++
Sbjct: 264 CVCDPGYTGDDCGMRSCPRGCSQRGRCENGRCVCNPGYTGEDCGVRSCPRGCSQRGRCKD 323
Query: 516 AEGKPLCSGR---GDCSCNQCSCFESEFGKIYGPFC---------ECDNFSCARNKGVLC 563
G+ +C DC C E G+ C +C +C R+ C
Sbjct: 324 --GRCVCDPGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCSTRTCPRD----C 377
Query: 564 SGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGE 623
G G C GEC C GY GD+C + +C G C++RG C G+C C PG G
Sbjct: 378 RGRGRCEDGECICDTGYSGDDCG----VRSCPGD----CNQRGRCEDGRCVCW-PGYTGT 428
Query: 624 MCEKCPTCPDACSTKRDC 641
C CP C + C
Sbjct: 429 DCGS-RACPRDCRGRGRC 445
Score = 61.2 bits (147), Expect = 4e-09
Identities = 51/167 (30%), Positives = 64/167 (38%), Gaps = 32/167 (19%)
Query: 465 CSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSG 524
CS+ P++ C+G G G C C PGY G C + +C C G
Sbjct: 616 CSIRTCPSN--CHGRGRCEEGRCLCDPGYTGPTCATR----------MCPAD-----CRG 658
Query: 525 RGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDN 584
RG C C C G+ G E +C C C G+C C G+ G +
Sbjct: 659 RGRCVQGVCLCHVGYGGEDCGQE-EPPASACPGG----CGPRELCRAGQCVCVEGFRGPD 713
Query: 585 CNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMC-EKCPT 630
C T CRG RG C G C C + G GE C E+ PT
Sbjct: 714 CAIQTCPGDCRG--------RGECHDGSCVCKD-GYAGEDCGEEVPT 751
Score = 47.4 bits (111), Expect = 5e-05
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 562 LCSGHGECHCGEC--KCHAGYIGDNCNCSTDIS-------TCRGRDGQICSERGHCLCGQ 612
LCS HG C C G+ G C+ TD + G C+++G C+ G+
Sbjct: 142 LCSLHGVFDLSRCTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCVRGR 201
Query: 613 CQCTEPGAFGEMCEKCPTCPDACSTKRDCVE 643
C C PG G C P+CP C + CV+
Sbjct: 202 CVCF-PGYTGPSCG-WPSCPGDCQGRGRCVQ 230
>gi|62988324 tenascin N [Homo sapiens]
Length = 1299
Score = 80.1 bits (196), Expect = 7e-15
Identities = 58/196 (29%), Positives = 80/196 (40%), Gaps = 34/196 (17%)
Query: 465 CSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSG 524
C G+ S C+G GT+ C C C++G C CSG
Sbjct: 131 CCQGVTDLSRHCSGHGTFSLETCS---------CHCEEGREGPA----CERLACPGACSG 177
Query: 525 RGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDN 584
G C +C C E G +C +C N CSGHGEC G C+CH ++ ++
Sbjct: 178 HGRCVDGRCLCHEPYVG------ADCGYPACPEN----CSGHGECVRGVCQCHEDFMSED 227
Query: 585 CNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVEC 644
C+ C G CS G C G+C C E G G C + T P ++ +
Sbjct: 228 CS----EKRCPGD----CSGHGFCDTGECYC-EEGFTGLDCAQVVT-PQGLQLLKNTEDS 277
Query: 645 LLLHSGKPDNQTCHSL 660
LL+ S +P +Q H L
Sbjct: 278 LLV-SWEPSSQVDHYL 292
Score = 61.6 bits (148), Expect = 3e-09
Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 32/132 (24%)
Query: 461 CTCGCSVGLEPNSAR-------CNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLC 513
C+C C G E + C+G G V G C C Y+G C C
Sbjct: 153 CSCHCEEGREGPACERLACPGACSGHGRCVDGRCLCHEPYVGADCGYP----------AC 202
Query: 514 REAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGE 573
E CSG G+C C C E + +C C + CSGHG C GE
Sbjct: 203 PEN-----CSGHGECVRGVCQCHEDFMSE------DCSEKRCPGD----CSGHGFCDTGE 247
Query: 574 CKCHAGYIGDNC 585
C C G+ G +C
Sbjct: 248 CYCEEGFTGLDC 259
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 77.8 bits (190), Expect = 4e-14
Identities = 59/199 (29%), Positives = 75/199 (37%), Gaps = 56/199 (28%)
Query: 476 CNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSC 535
C+ GT + G C C+PGY G CE D C + P CSGRG C +C C
Sbjct: 635 CSNHGTCITGTCICNPGYKGESCEEVD----------CMD----PTCSGRGVCVRGECHC 680
Query: 536 FESEFG--------------KIYGPF------CECDNFSCARNKGVL-----CSGHGECH 570
G +G F C CD + + C GHG C
Sbjct: 681 SVGWGGTNCETPRATCLDQCSGHGTFLPDTGLCSCDPSWTGHDCSIEICAADCGGHGVCV 740
Query: 571 CGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKC-- 628
G C+C G++G C D C R C+E G C G+C+C+ PG GE C
Sbjct: 741 GGTCRCEDGWMGAAC----DQRACHPR----CAEHGTCRDGKCECS-PGWNGEHCTIAHY 791
Query: 629 ------PTCPDACSTKRDC 641
CP C+ C
Sbjct: 792 LDRVVKEGCPGLCNGNGRC 810
Score = 75.5 bits (184), Expect = 2e-13
Identities = 51/146 (34%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Query: 522 CSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYI 581
C G GDC C CF G +C SC VLCSG+G+ G C CH+G+
Sbjct: 570 CYGNGDCISGTCHCFLGFLGP------DCGRASCP----VLCSGNGQYMKGRCLCHSGWK 619
Query: 582 GDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDC 641
G C D+ T + D CS G C+ G C C PG GE CE+ CS + C
Sbjct: 620 GAEC----DVPTNQCID-VACSNHGTCITGTCIC-NPGYKGESCEEVDCMDPTCSGRGVC 673
Query: 642 V--EC-LLLHSGKPDNQTCHSLCRDE 664
V EC + G + +T + C D+
Sbjct: 674 VRGECHCSVGWGGTNCETPRATCLDQ 699
Score = 72.0 bits (175), Expect = 2e-12
Identities = 52/164 (31%), Positives = 64/164 (39%), Gaps = 31/164 (18%)
Query: 474 ARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQC 533
+ C G+G + G C C G+LG C A LCSG G +C
Sbjct: 568 SNCYGNGDCISGTCHCFLGFLGPD---------------CGRASCPVLCSGNGQYMKGRC 612
Query: 534 SCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDIST 593
C G C+ C V CS HG C G C C+ GY G++C D
Sbjct: 613 LCHSG----WKGAECDVPTNQCI---DVACSNHGTCITGTCICNPGYKGESCE-EVDCM- 663
Query: 594 CRGRDGQICSERGHCLCGQCQCTEPGAFGEMCE-KCPTCPDACS 636
CS RG C+ G+C C+ G G CE TC D CS
Sbjct: 664 -----DPTCSGRGVCVRGECHCS-VGWGGTNCETPRATCLDQCS 701
Score = 50.8 bits (120), Expect = 5e-06
Identities = 47/182 (25%), Positives = 66/182 (36%), Gaps = 36/182 (19%)
Query: 461 CTC-----GCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCRE 515
C+C G +E +A C G G V G C C G++G C+ Q C
Sbjct: 713 CSCDPSWTGHDCSIEICAADCGGHGVCVGGTCRCEDGWMGAACD----------QRACH- 761
Query: 516 AEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGEC----HC 571
P C+ G C +C C G+ D G LC+G+G C +
Sbjct: 762 ----PRCAEHGTCRDGKCECSPGWNGEHCTIAHYLDRVVKEGCPG-LCNGNGRCTLDLNG 816
Query: 572 GECKCHAGYIGDNCNCS--TDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCP 629
C C G+ G C+ S T + DG + C+ C C +P +C P
Sbjct: 817 WHCVCQLGWRGAGCDTSMETACGDSKDNDGDGLVD---CMDPDC-CLQP-----LCHINP 867
Query: 630 TC 631
C
Sbjct: 868 LC 869
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 75.9 bits (185), Expect = 1e-13
Identities = 51/165 (30%), Positives = 65/165 (39%), Gaps = 31/165 (18%)
Query: 473 SARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQ 532
S CNG+G + G C C PG+LG C ++ C LC G G+
Sbjct: 533 STNCNGNGECISGHCHCFPGFLGPDCA----------RDSC-----PVLCGGNGEYEKGH 577
Query: 533 CSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDIS 592
C C GP C+ C C GHG C G C C GY G+ C +
Sbjct: 578 CVCRHG----WKGPECDVPEEQCI---DPTCFGHGTCIMGVCICVPGYKGEICEEEDCLD 630
Query: 593 TCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCE-KCPTCPDACS 636
+CS G C+ G+C C+ G G CE P C + CS
Sbjct: 631 -------PMCSNHGICVKGECHCS-TGWGGVNCETPLPVCQEQCS 667
Score = 75.5 bits (184), Expect = 2e-13
Identities = 62/231 (26%), Positives = 86/231 (37%), Gaps = 65/231 (28%)
Query: 476 CNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSC 535
C G GT + G+C C PGY G CE +D C + P+CS G C +C C
Sbjct: 601 CFGHGTCIMGVCICVPGYKGEICEEED----------CLD----PMCSNHGICVKGECHC 646
Query: 536 FESEFGKI---------------YGPF------CECD----NFSCARNKGVL-CSGHGEC 569
+ +G + +G F C CD C+ + C HG C
Sbjct: 647 -STGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTELCTMECGSHGVC 705
Query: 570 HCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKC- 628
G C+C G++G C + +C C+E G C G+C+C+ PG G+ C
Sbjct: 706 SRGICQCEEGWVGPTC----EERSCHSH----CTEHGQCKDGKCECS-PGWEGDHCTIAH 756
Query: 629 ------PTCPDACSTKRDCV--------ECLLLHSGKPDNQTCHSLCRDEV 665
CP C C C + SG N LC D +
Sbjct: 757 YLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQVGWSGTGCNVVMEMLCGDNL 807
Score = 67.8 bits (164), Expect = 4e-11
Identities = 47/175 (26%), Positives = 67/175 (38%), Gaps = 40/175 (22%)
Query: 456 GVTYNCTCGCSVG---------LEPNSARCNGSGTYV--CGLCECSPGYLGTRCECQDGE 504
G+ C CS G L +C+G GT++ G+C C P + G+ C +
Sbjct: 637 GICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTE--- 693
Query: 505 NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCS 564
LC C G CS C C E G C+ SC + C+
Sbjct: 694 -------LCTME-----CGSHGVCSRGICQCEEGWVGPT------CEERSCHSH----CT 731
Query: 565 GHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQ----CQC 615
HG+C G+C+C G+ GD+C + + R +C G C Q C C
Sbjct: 732 EHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC 786
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 75.9 bits (185), Expect = 1e-13
Identities = 51/165 (30%), Positives = 65/165 (39%), Gaps = 31/165 (18%)
Query: 473 SARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQ 532
S CNG+G + G C C PG+LG C ++ C LC G G+
Sbjct: 532 STNCNGNGECISGHCHCFPGFLGPDCA----------RDSC-----PVLCGGNGEYEKGH 576
Query: 533 CSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDIS 592
C C GP C+ C C GHG C G C C GY G+ C +
Sbjct: 577 CVCRHG----WKGPECDVPEEQCI---DPTCFGHGTCIMGVCICVPGYKGEICEEEDCLD 629
Query: 593 TCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCE-KCPTCPDACS 636
+CS G C+ G+C C+ G G CE P C + CS
Sbjct: 630 -------PMCSNHGICVKGECHCS-TGWGGVNCETPLPVCQEQCS 666
Score = 75.5 bits (184), Expect = 2e-13
Identities = 62/231 (26%), Positives = 86/231 (37%), Gaps = 65/231 (28%)
Query: 476 CNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSC 535
C G GT + G+C C PGY G CE +D C + P+CS G C +C C
Sbjct: 600 CFGHGTCIMGVCICVPGYKGEICEEED----------CLD----PMCSNHGICVKGECHC 645
Query: 536 FESEFGKI---------------YGPF------CECD----NFSCARNKGVL-CSGHGEC 569
+ +G + +G F C CD C+ + C HG C
Sbjct: 646 -STGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTELCTMECGSHGVC 704
Query: 570 HCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKC- 628
G C+C G++G C + +C C+E G C G+C+C+ PG G+ C
Sbjct: 705 SRGICQCEEGWVGPTC----EERSCHSH----CTEHGQCKDGKCECS-PGWEGDHCTIAH 755
Query: 629 ------PTCPDACSTKRDCV--------ECLLLHSGKPDNQTCHSLCRDEV 665
CP C C C + SG N LC D +
Sbjct: 756 YLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQVGWSGTGCNVVMEMLCGDNL 806
Score = 67.8 bits (164), Expect = 4e-11
Identities = 47/175 (26%), Positives = 67/175 (38%), Gaps = 40/175 (22%)
Query: 456 GVTYNCTCGCSVG---------LEPNSARCNGSGTYV--CGLCECSPGYLGTRCECQDGE 504
G+ C CS G L +C+G GT++ G+C C P + G+ C +
Sbjct: 636 GICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTE--- 692
Query: 505 NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCS 564
LC C G CS C C E G C+ SC + C+
Sbjct: 693 -------LCTME-----CGSHGVCSRGICQCEEGWVGPT------CEERSCHSH----CT 730
Query: 565 GHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQ----CQC 615
HG+C G+C+C G+ GD+C + + R +C G C Q C C
Sbjct: 731 EHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC 785
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 75.9 bits (185), Expect = 1e-13
Identities = 51/165 (30%), Positives = 65/165 (39%), Gaps = 31/165 (18%)
Query: 473 SARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQ 532
S CNG+G + G C C PG+LG C ++ C LC G G+
Sbjct: 533 STNCNGNGECISGHCHCFPGFLGPDCA----------RDSC-----PVLCGGNGEYEKGH 577
Query: 533 CSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDIS 592
C C GP C+ C C GHG C G C C GY G+ C +
Sbjct: 578 CVCRHG----WKGPECDVPEEQCI---DPTCFGHGTCIMGVCICVPGYKGEICEEEDCLD 630
Query: 593 TCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCE-KCPTCPDACS 636
+CS G C+ G+C C+ G G CE P C + CS
Sbjct: 631 -------PMCSNHGICVKGECHCS-TGWGGVNCETPLPVCQEQCS 667
Score = 75.5 bits (184), Expect = 2e-13
Identities = 62/231 (26%), Positives = 86/231 (37%), Gaps = 65/231 (28%)
Query: 476 CNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSC 535
C G GT + G+C C PGY G CE +D C + P+CS G C +C C
Sbjct: 601 CFGHGTCIMGVCICVPGYKGEICEEED----------CLD----PMCSNHGICVKGECHC 646
Query: 536 FESEFGKI---------------YGPF------CECD----NFSCARNKGVL-CSGHGEC 569
+ +G + +G F C CD C+ + C HG C
Sbjct: 647 -STGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTELCTMECGSHGVC 705
Query: 570 HCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKC- 628
G C+C G++G C + +C C+E G C G+C+C+ PG G+ C
Sbjct: 706 SRGICQCEEGWVGPTC----EERSCHSH----CTEHGQCKDGKCECS-PGWEGDHCTIAH 756
Query: 629 ------PTCPDACSTKRDCV--------ECLLLHSGKPDNQTCHSLCRDEV 665
CP C C C + SG N LC D +
Sbjct: 757 YLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQVGWSGTGCNVVMEMLCGDNL 807
Score = 67.8 bits (164), Expect = 4e-11
Identities = 47/175 (26%), Positives = 67/175 (38%), Gaps = 40/175 (22%)
Query: 456 GVTYNCTCGCSVG---------LEPNSARCNGSGTYV--CGLCECSPGYLGTRCECQDGE 504
G+ C CS G L +C+G GT++ G+C C P + G+ C +
Sbjct: 637 GICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTE--- 693
Query: 505 NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCS 564
LC C G CS C C E G C+ SC + C+
Sbjct: 694 -------LCTME-----CGSHGVCSRGICQCEEGWVGPT------CEERSCHSH----CT 731
Query: 565 GHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQ----CQC 615
HG+C G+C+C G+ GD+C + + R +C G C Q C C
Sbjct: 732 EHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC 786
>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
Length = 1541
Score = 75.1 bits (183), Expect = 2e-13
Identities = 66/229 (28%), Positives = 89/229 (38%), Gaps = 49/229 (21%)
Query: 459 YNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC--ECQDGENQSVYQNLCREA 516
+NC+ C+ N A C+ V G C C+PG++G C C G +Y + CR +
Sbjct: 997 HNCSQACACF---NGASCDP----VHGQCHCAPGWMGPSCLQACPAG----LYGDNCRHS 1045
Query: 517 EGKPLCSGRGDCS--CNQCSCFESEFGKIYGPFCECDNF--SCARNKGVLCSGHGECHCG 572
LC G C C+C E G C + C + G L G + H G
Sbjct: 1046 ---CLCQNGGTCDPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNGGLCDPHTG 1102
Query: 573 ECKCHAGYIGDNCNCSTDISTC-RGRDGQICSERGHC--------LCGQCQC-------- 615
C C AG+ GD C S C RG G+ C++R C + G C+C
Sbjct: 1103 RCLCPAGWTGDKCQ-----SPCLRGWFGEACAQRCSCPPGAACHHVTGACRCPPGFTGSG 1157
Query: 616 ----TEPGAFGEMCEKCPTCP---DACSTKRDCVECLLLHSGKPDNQTC 657
PG+FGE C + CP AC C + G Q C
Sbjct: 1158 CEQACPPGSFGEDCAQMCQCPGENPACHPATGTCSCAAGYHGPSCQQRC 1206
Score = 68.9 bits (167), Expect = 2e-11
Identities = 75/259 (28%), Positives = 95/259 (36%), Gaps = 74/259 (28%)
Query: 460 NCTCGCSVGLEPNSARCNGSGTY--VCGLCECSPGYLGTRCECQDGENQSVYQNLCREAE 517
NC+ CS C GT V G C C PG GT CE DG + Y CR+
Sbjct: 563 NCSFSCS---------CQNGGTCDSVTGACRCPPGVSGTNCE--DGCPKGYYGKHCRK-- 609
Query: 518 GKPLCSGRGDCS--CNQCSCFESEFGKI---------YGPFC------------ECD--- 551
K C+ RG C C C +G+ +GP C CD
Sbjct: 610 -KCNCANRGRCHRLYGACLCDPGLYGRFCHLTCPPWAFGPGCSEECQCVQPHTQSCDKRD 668
Query: 552 -NFSC-ARNKGVLCSGHGE-----------CHC----------GEC--KCHAGYIGDNCN 586
+ SC A +G C E C C GEC +C AG+ G++C
Sbjct: 669 GSCSCKAGFRGERCQAECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQGEDCG 728
Query: 587 CSTDISTCRGRDGQICSERG---HCLCGQCQCTEPGAFGEMCE-KCPTCPDACSTKRDCV 642
+ T CS G H + GQC+C PG GE CE CP + C
Sbjct: 729 QECPVGTFGVNCSSSCSCGGAPCHGVTGQCRC-PPGRTGEDCEADCPEGRWGLGCQEICP 787
Query: 643 ECLLLHSGKPDNQTCHSLC 661
C H+ + D +T LC
Sbjct: 788 AC--QHAARCDPETGACLC 804
Score = 68.6 bits (166), Expect = 2e-11
Identities = 62/201 (30%), Positives = 80/201 (39%), Gaps = 49/201 (24%)
Query: 463 CGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCE--CQDGENQSVYQNLCREAEGKP 520
C C P A C+ +V G C C PG+ G+ CE C G +C+ P
Sbjct: 1132 CSC-----PPGAACH----HVTGACRCPPGFTGSGCEQACPPGSFGEDCAQMCQCPGENP 1182
Query: 521 LCS-GRGDCSC----NQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECK 575
C G CSC + SC + YGP CE + G L G + G C+
Sbjct: 1183 ACHPATGTCSCAAGYHGPSCQQRCPPGRYGPGCE-------QLCGCLNGGSCDAATGACR 1235
Query: 576 CHAGYIGDNCNCSTDISTC-RGRDGQICSERGHCLCGQ----------CQCTEPGAFGEM 624
C G++G +CN TC +GR G C+ C CGQ C C PG G
Sbjct: 1236 CPTGFLGTDCNL-----TCPQGRFGPNCTH--VCGCGQGAACDPVTGTCLC-PPGRAGVR 1287
Query: 625 CEK-CPT------CPDACSTK 638
CE+ CP C CS +
Sbjct: 1288 CERGCPQNRFGVGCEHTCSCR 1308
Score = 65.5 bits (158), Expect = 2e-10
Identities = 54/185 (29%), Positives = 67/185 (36%), Gaps = 33/185 (17%)
Query: 460 NCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCE--CQDGENQSVYQNLCREAE 517
NC+ CS G P C+G V G C C PG G CE C +G Q +C
Sbjct: 739 NCSSSCSCGGAP----CHG----VTGQCRCPPGRTGEDCEADCPEGRWGLGCQEIC---- 786
Query: 518 GKPLC--SGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECH--CGE 573
P C + R D C C G C + + C+ G CH G
Sbjct: 787 --PACQHAARCDPETGACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHPATGH 844
Query: 574 CKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQC--------TEPGAFGEMC 625
C C G+ G +C + D G G CS +C G C E G G C
Sbjct: 845 CSCAPGWTGFSCQRACD----TGHWGPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPRC 900
Query: 626 E-KCP 629
E +CP
Sbjct: 901 EQQCP 905
Score = 60.8 bits (146), Expect = 5e-09
Identities = 57/213 (26%), Positives = 69/213 (32%), Gaps = 36/213 (16%)
Query: 463 CGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLC 522
C CS G +GS + GLC C GY+G RCE Q C + P C
Sbjct: 873 CNCSAG--------HGSCDAISGLCLCEAGYVGPRCEQQ-----------CPQGHFGPGC 913
Query: 523 SGRGDC----SCNQ----CSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHC--G 572
R C +C+ C+C G C F C+ C G
Sbjct: 914 EQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAACDAVNG 973
Query: 573 ECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLC----GQCQCTEPGAFGEMCEKC 628
C C AG G C + T Q C+ C GQC C PG G C
Sbjct: 974 SCLCPAGRRGPRCAETCPAHTYGHNCSQACACFNGASCDPVHGQCHCA-PGWMGPSC--L 1030
Query: 629 PTCPDACSTKRDCVECLLLHSGKPDNQTCHSLC 661
CP CL + G D + H C
Sbjct: 1031 QACPAGLYGDNCRHSCLCQNGGTCDPVSGHCAC 1063
Score = 60.5 bits (145), Expect = 6e-09
Identities = 54/187 (28%), Positives = 73/187 (39%), Gaps = 38/187 (20%)
Query: 472 NSARCNGSGTYVCGLCECSPGYLGTRCE--CQDGENQSVYQNLCREAEGKPLCSGRGDC- 528
++ARC+ G C C PG++G+RC+ C G Q C C+ G C
Sbjct: 791 HAARCDPE----TGACLCLPGFVGSRCQDVCPAGWYGPSCQTRCS-------CANDGHCH 839
Query: 529 -SCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCS-GHGECHC--GECKCHAGYIGDN 584
+ CSC G C+ ++ + CS GHG C G C C AGY+G
Sbjct: 840 PATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPR 899
Query: 585 CNCSTDISTCRGRDGQICSERGHC--------LCGQCQCTEPGAFGEMCE-KCPT----- 630
C + +G G C +R C + G C C G G CE CP
Sbjct: 900 C----EQQCPQGHFGPGCEQRCQCQHGAACDHVSGACTC-PAGWRGTFCEHACPAGFFGL 954
Query: 631 -CPDACS 636
C AC+
Sbjct: 955 DCRSACN 961
Score = 59.7 bits (143), Expect = 1e-08
Identities = 67/269 (24%), Positives = 85/269 (31%), Gaps = 91/269 (33%)
Query: 463 CGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCE--CQDGENQSVYQNLCREAEGKP 520
CGC G GS G C C G+LGT C C G ++C +G
Sbjct: 1219 CGCLNG---------GSCDAATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGAA 1269
Query: 521 LCSGRGDCSCN--------QCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCG 572
G C C + C ++ FG C++ RN G+ + +G C CG
Sbjct: 1270 CDPVTGTCLCPPGRAGVRCERGCPQNRFG------VGCEHTCSCRNGGLCHASNGSCSCG 1323
Query: 573 -----------------------ECKCHAGYIGDNCNCSTDISTCR---GRDGQICSE-- 604
EC CH +N C TCR G GQ C
Sbjct: 1324 LGWTGRHCELACPPGRYGAACHLECSCH-----NNSTCEPATGTCRCGPGFYGQACEHPC 1378
Query: 605 ---------RGHCLC----------GQCQC------------TEPGAFGEMCEKCPTCPD 633
+G C C G+C C EPG+FGE C + C
Sbjct: 1379 PPGFHGAGCQGLCWCQHGAPCDPISGRCLCPAGFHGHFCERGCEPGSFGEGCHQRCDCDG 1438
Query: 634 ACSTKRDCVECLLLHSGKPDNQTCHSLCR 662
D V L L TC+ CR
Sbjct: 1439 GAPC--DPVTGLCLCPPGRSGATCNLDCR 1465
Score = 57.0 bits (136), Expect = 7e-08
Identities = 55/203 (27%), Positives = 70/203 (34%), Gaps = 51/203 (25%)
Query: 460 NCTCG-------CSVGLEPN--------SARCNGSGTY--VCGLCECSPGYLGTRCE--C 500
+C+CG C + P C+ + T G C C PG+ G CE C
Sbjct: 1319 SCSCGLGWTGRHCELACPPGRYGAACHLECSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1378
Query: 501 QDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCE--CDNFSCARN 558
G + + Q LC G P G C C +G FCE C+ S
Sbjct: 1379 PPGFHGAGCQGLCWCQHGAPCDPISGRCLCP---------AGFHGHFCERGCEPGSFGEG 1429
Query: 559 KGVLCSGHGECHC----GECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLC---- 610
C G C G C C G G CN + RG+ G C+ HC C
Sbjct: 1430 CHQRCDCDGGAPCDPVTGLCLCPPGRSGATCN----LDCRRGQFGPSCTL--HCDCGGGA 1483
Query: 611 ------GQCQCTEPGAFGEMCEK 627
GQC C + G G C +
Sbjct: 1484 DCDPVSGQCHCVD-GYMGPTCRE 1505
Score = 55.1 bits (131), Expect = 3e-07
Identities = 45/149 (30%), Positives = 54/149 (36%), Gaps = 24/149 (16%)
Query: 522 CSGRGDC--SCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECH--CGECKCH 577
C G C + C C E G I C D F + C G C G C+C
Sbjct: 527 CRNGGTCLLGLDGCDCPEGWTGLICNETCPPDTFGKNCSFSCSCQNGGTCDSVTGACRCP 586
Query: 578 AGYIGDNC--NCSTDISTCRGRDGQICSERGHC--LCGQCQCTEPGAFGEMCEKCPTCP- 632
G G NC C R C+ RG C L G C C +PG +G C TCP
Sbjct: 587 PGVSGTNCEDGCPKGYYGKHCRKKCNCANRGRCHRLYGACLC-DPGLYGRFCHL--TCPP 643
Query: 633 ----DACSTKRDCVECLLLHSGKPDNQTC 657
CS + CV+ P Q+C
Sbjct: 644 WAFGPGCSEECQCVQ--------PHTQSC 664
Score = 44.3 bits (103), Expect = 5e-04
Identities = 47/179 (26%), Positives = 59/179 (32%), Gaps = 34/179 (18%)
Query: 463 CGCSVG--LEPNSARCNGSGTYVCGLCECSPGYLGT----RCECQDGENQSVYQNLCREA 516
C C VG L + C GL +C+ G L T +C C G C
Sbjct: 268 CECHVGYQLAADGKACEDVDECAAGLAQCAHGCLNTQGSFKCVCHAGYELGADGRQCYRI 327
Query: 517 EGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCEC--------------DNFSCARN---K 559
E + + S C N C GP C C D CA + +
Sbjct: 328 EMEIVNS----CEANNGGCSHGCSHTSAGPLCTCPRGYELDTDQRTCIDVDDCADSPCCQ 383
Query: 560 GVLCSGHGECHCGECKCHAGY--IGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCT 616
V + G CG C+AGY D C C D+ C G C L G QC+
Sbjct: 384 QVCTNNPGGYECG---CYAGYRLSADGCGCE-DVDECASSRGG-CEHHCTNLAGSFQCS 437
Score = 35.8 bits (81), Expect = 0.16
Identities = 50/232 (21%), Positives = 73/232 (31%), Gaps = 41/232 (17%)
Query: 464 GCSVGLEPNSARCNGSGTYVCGL---CECSPGYLGTRCECQDGE---NQSVYQNLCREAE 517
GC + E +++ C G V G C C PG+ G RC+ E + Q+ C
Sbjct: 122 GC-LSAECSASLCFHGGRCVPGSAQPCHCPPGFQGPRCQYDVDECRTHNGGCQHRCVNTP 180
Query: 518 GKPLCS----------------------GRGDCSCNQCSCFESEFGKIYGPFCECDNFSC 555
G LC G G C Q C + I C+C
Sbjct: 181 GSYLCECKPGFRLHTDSRTCLAINSCALGNGGC---QHHCVQL---TITRHRCQCRPGFQ 234
Query: 556 ARNKGVLCSGHGEC--HCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQC 613
+ G C C G C + C + DG+ C + C G
Sbjct: 235 LQEDGRHCVRRSPCANRNGSCMHRCQVVRGLARCECHVGYQLAADGKACEDVDECAAGLA 294
Query: 614 QCTEP--GAFGEMCEKCPTCPDACSTKRDC--VECLLLHSGKPDNQTCHSLC 661
QC G C + + R C +E +++S + +N C C
Sbjct: 295 QCAHGCLNTQGSFKCVCHAGYELGADGRQCYRIEMEIVNSCEANNGGCSHGC 346
>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
Length = 1140
Score = 70.9 bits (172), Expect = 5e-12
Identities = 57/199 (28%), Positives = 73/199 (36%), Gaps = 41/199 (20%)
Query: 459 YNCTCGCSVGLEPNSA----RCNGSGT--YVCGLCECSPGYLGTRCE--CQDGENQSVYQ 510
+ C C G N +C T +V G C C PGY G CE C G++ +
Sbjct: 176 WRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCE 235
Query: 511 NLCREAEGKPLCSGRGDCSC------NQCS--CFESEFGKIYGPFCECDNFSCARNKGVL 562
C G G+CSC C C E FGK C+C N
Sbjct: 236 QRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHN---------- 285
Query: 563 CSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHC--------LCGQCQ 614
G + G+C C GY G+ C + T G +C+E C + G C
Sbjct: 286 -GGTCDAATGQCHCSPGYTGERCQDECPVGTY----GVLCAETCQCVNGGKCYHVSGACL 340
Query: 615 CTEPGAFGEMCEKCPTCPD 633
C E G GE CE CP+
Sbjct: 341 C-EAGFAGERCE-ARLCPE 357
Score = 70.5 bits (171), Expect = 6e-12
Identities = 57/198 (28%), Positives = 76/198 (38%), Gaps = 42/198 (21%)
Query: 460 NCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGK 519
+CT C N A CN + G C C+ G+ G RCE D Q Y N C +
Sbjct: 147 HCTSRCQC---KNGALCNP----ITGACHCAAGFRGWRCE--DRCEQGTYGNDCHQR--- 194
Query: 520 PLCSGRGDCSCN----QCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECH--CGE 573
C + +C+ +C C G C + C G CH GE
Sbjct: 195 --CQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGE 252
Query: 574 CKCHAGYIGDNCNCSTDISTC-RGRDGQICSERGHC--------LCGQCQCTEPGAFGEM 624
C C +G++G C C GR G+ CS+ C GQC C+ PG GE
Sbjct: 253 CSCPSGWMGTVCG-----QPCPEGRFGKNCSQECQCHNGGTCDAATGQCHCS-PGYTGER 306
Query: 625 C-EKCPT------CPDAC 635
C ++CP C + C
Sbjct: 307 CQDECPVGTYGVLCAETC 324
Score = 65.5 bits (158), Expect = 2e-10
Identities = 58/192 (30%), Positives = 82/192 (42%), Gaps = 46/192 (23%)
Query: 460 NCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCE--CQDGENQSVYQNLCREAE 517
NC+ C N A C+ G+CEC+PG+ GT C+ C G Y + C ++
Sbjct: 580 NCSLPCYC---KNGASCSPDD----GICECAPGFRGTTCQRICSPG----FYGHRC--SQ 626
Query: 518 GKPLC-SGRGDCS--CNQCSCFESEFGKIYGPFCECDNF--SCARNKGV-LCSGHGECH- 570
P C G C C C G + C F +CA G+ C+ +G C+
Sbjct: 627 TCPQCVHSSGPCHHITGLCDCLPGFTGALCNEVCPSGRFGKNCA---GICTCTNNGTCNP 683
Query: 571 -CGECKCHAGYIGDNC-----------NCSTDISTCRGRDGQICSERGHCLCGQCQCTEP 618
C+C+ G+IG +C NC I TC +G CS G+C+CT P
Sbjct: 684 IDRSCQCYPGWIGSDCSQPCPPAHWGPNC---IHTCNCHNGAFCS----AYDGECKCT-P 735
Query: 619 GAFGEMC-EKCP 629
G G C ++CP
Sbjct: 736 GWTGLYCTQRCP 747
Score = 58.9 bits (141), Expect = 2e-08
Identities = 59/198 (29%), Positives = 70/198 (35%), Gaps = 46/198 (23%)
Query: 475 RCNGSGTY--VCGLCECSPGYLGTRC--ECQDGENQSVYQNLCREAEGKPLCSGRGDCSC 530
+C+ GT G C CSPGY G RC EC G + C+ G G C C
Sbjct: 282 QCHNGGTCDAATGQCHCSPGYTGERCQDECPVGTYGVLCAETCQCVNGGKCYHVSGACLC 341
Query: 531 NQCSCFESEFGKIYGPFCECDNFSCARN-KGVLCSGHGECH----------CGECKCHAG 579
+ F E C+ C G+ C CH GEC C G
Sbjct: 342 E--AGFAGE---------RCEARLCPEGLYGIKCDKRCPCHLENTHSCHPMSGECACKPG 390
Query: 580 YIGDNCN--CSTDI--STCRGRDGQICSERGHCLC----GQCQCTEPGAFGEMCE-KCP- 629
+ G CN CS C+ QICS + C G+C C PG G C CP
Sbjct: 391 WSGLYCNETCSPGFYGEACQ----QICSCQNGADCDSVTGKCTCA-PGFKGIDCSTPCPL 445
Query: 630 -----TCPDACSTKRDCV 642
C C K D V
Sbjct: 446 GTYGINCSSRCGCKNDAV 463
Score = 57.0 bits (136), Expect = 7e-08
Identities = 66/244 (27%), Positives = 93/244 (38%), Gaps = 57/244 (23%)
Query: 448 GFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCECQ-DGENQ 506
GF +S E+ V + C C G RC T C+C PG+ GT C DG++
Sbjct: 97 GFYESGEMCVPH-CADKCVHG------RCIAPNT-----CQCEPGWGGTNCSSACDGDHW 144
Query: 507 SVYQNLCREAEGKPLCSG-RGDCSCN------QCS--CFESEFGKIYGPFCECDNFSCAR 557
+ + + LC+ G C C +C C + +G C+C N
Sbjct: 145 GPHCTSRCQCKNGALCNPITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQN----- 199
Query: 558 NKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHC--------L 609
G C + GEC+C GY G C D+ G+ G C +R C +
Sbjct: 200 --GATC----DHVTGECRCPPGYTGAFCE---DLCP-PGKHGPQCEQRCPCQNGGVCHHV 249
Query: 610 CGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQT--CH-------SL 660
G+C C G G +C + CP+ K EC + G D T CH
Sbjct: 250 TGECSCPS-GWMGTVCGQ--PCPEGRFGKNCSQECQCHNGGTCDAATGQCHCSPGYTGER 306
Query: 661 CRDE 664
C+DE
Sbjct: 307 CQDE 310
Score = 55.5 bits (132), Expect = 2e-07
Identities = 62/224 (27%), Positives = 80/224 (35%), Gaps = 49/224 (21%)
Query: 456 GVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRCE--CQDGENQSVYQNLC 513
G N TC C N CN + G C C+PG+ G +CE CQDG Y C
Sbjct: 492 GFGCNLTCQCL-----NGGACNT----LDGTCTCAPGWRGEKCELPCQDG----TYGLNC 538
Query: 514 REAEGKPLCSGRGDC--SCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHC 571
E + CS C + C C G CD+ G CS C+C
Sbjct: 539 AE---RCDCSHADGCHPTTGHCRCLPGWSG------VHCDSVCAEGRWGPNCS--LPCYC 587
Query: 572 ----------GECKCHAGYIGDNCN--CSTDI--STCRGRDGQICSERGHC--LCGQCQC 615
G C+C G+ G C CS C Q G C + G C C
Sbjct: 588 KNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLCDC 647
Query: 616 TEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSG--KPDNQTC 657
PG G +C + CP K C ++G P +++C
Sbjct: 648 L-PGFTGALCNE--VCPSGRFGKNCAGICTCTNNGTCNPIDRSC 688
Score = 48.5 bits (114), Expect = 2e-05
Identities = 50/193 (25%), Positives = 70/193 (36%), Gaps = 34/193 (17%)
Query: 461 CTCGCSVG----LEPNSARC-NGSGTY-VCGLCECSPGYLGTRCECQDGENQSVYQNLCR 514
C C VG L + +C NG Y V G C C G+ G RCE + LC
Sbjct: 307 CQDECPVGTYGVLCAETCQCVNGGKCYHVSGACLCEAGFAGERCEAR----------LCP 356
Query: 515 EAEGKPLCSGRGDC------SCN----QCSCFESEFGKIYGPFCECDNFSCARNKGVLCS 564
E C R C SC+ +C+C G C + A + C
Sbjct: 357 EGLYGIKCDKRCPCHLENTHSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQ 416
Query: 565 GHGECHC--GECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLC----GQCQCTEP 618
+C G+C C G+ G +C+ + T C + +C G C C +
Sbjct: 417 NGADCDSVTGKCTCAPGFKGIDCSTPCPLGTYGINCSSRCGCKNDAVCSPVDGSCTC-KA 475
Query: 619 GAFGEMCE-KCPT 630
G G C +CP+
Sbjct: 476 GWHGVDCSIRCPS 488
Score = 30.4 bits (67), Expect = 6.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 477 NGSGTYVCGLCECSPGYLGTRCE 499
N + ++ G C CSPG+ G RC+
Sbjct: 807 NSTCDHITGTCYCSPGWKGARCD 829
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 70.5 bits (171), Expect = 6e-12
Identities = 50/143 (34%), Positives = 62/143 (43%), Gaps = 36/143 (25%)
Query: 511 NLCREAEGK------PLCSGRGDCSCNQCSCFESE--FGKIYG-PFCECDNFSCARNKGV 561
N C+E+ P CSG G+ S C C +E FGK P+C
Sbjct: 158 NCCQESAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSEPYCPLG---------- 207
Query: 562 LCSGHGECHCGECKCHAGYIGDNCN---CSTDISTCRGRDGQICSERGHCLCGQCQCTEP 618
CS G C G+C C + Y GD+C+ C TD CS RG C+ G+C C EP
Sbjct: 208 -CSSRGVCVDGQCICDSEYSGDDCSELRCPTD-----------CSSRGLCVDGECVCEEP 255
Query: 619 GAFGEMCEKCPTCPDACSTKRDC 641
GE C + CP CS K C
Sbjct: 256 YT-GEDCREL-RCPGDCSGKGRC 276
Score = 68.2 bits (165), Expect = 3e-11
Identities = 47/161 (29%), Positives = 63/161 (39%), Gaps = 38/161 (23%)
Query: 476 CNGSGTYV---CGLCECSPGYLGTRCE-------------CQDGE---NQSVYQNLCREA 516
C+G G + CG C C+ G+ G C C DG+ + + C E
Sbjct: 175 CSGHGNFSFESCG-CICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSEL 233
Query: 517 EGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKC 576
CS RG C +C C E G+ +C C + CSG G C G C C
Sbjct: 234 RCPTDCSSRGLCVDGECVCEEPYTGE------DCRELRCPGD----CSGKGRCANGTCLC 283
Query: 577 HAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTE 617
GY+G++C ++ C G RG C G C C E
Sbjct: 284 EEGYVGEDCGQRQCLNACSG--------RGQCEEGLCVCEE 316
Score = 60.8 bits (146), Expect = 5e-09
Identities = 43/150 (28%), Positives = 55/150 (36%), Gaps = 33/150 (22%)
Query: 460 NCTCGCSVGLEPNSAR-------CNGSGTYVCGLCECSPGYLGTRCE------------- 499
+C C C+ G + C+ G V G C C Y G C
Sbjct: 185 SCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCSSRGL 244
Query: 500 CQDGE---NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCA 556
C DGE + CRE CSG+G C+ C C E G+ +C C
Sbjct: 245 CVDGECVCEEPYTGEDCRELRCPGDCSGKGRCANGTCLCEEGYVGE------DCGQRQCL 298
Query: 557 RNKGVLCSGHGECHCGECKCHAGYIGDNCN 586
CSG G+C G C C GY G +C+
Sbjct: 299 N----ACSGRGQCEEGLCVCEEGYQGPDCS 324
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 584 NCNCSTDISTCRGRDGQI--CSERGHCLCGQCQCT-EPGAFGEMCEKCPTCPDACSTKRD 640
N NC + S G+ I CS G+ C C G FG+ C + P CP CS++
Sbjct: 156 NANCCQE-SAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSE-PYCPLGCSSRGV 213
Query: 641 CVECLLLHSGKPDNQTCHSL 660
CV+ + + C L
Sbjct: 214 CVDGQCICDSEYSGDDCSEL 233
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 69.3 bits (168), Expect = 1e-11
Identities = 63/224 (28%), Positives = 84/224 (37%), Gaps = 53/224 (23%)
Query: 468 GLEPNSARCNGSGTY----VC---GLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKP 520
G E A C G+ T VC G C C GY G C+ + + + C+E
Sbjct: 72 GDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCP--RQFWGPDCKELCS-- 127
Query: 521 LCSGRGDCS--CNQCSCFESEFGKIYGPFCECDNFSCARNKGVL---------------- 562
C G C QC+C +G C+C + +C G
Sbjct: 128 -CHPHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACY 186
Query: 563 CSGHGEC--HCGECKCHAGYIGDNCN--CSTDISTCRGRDGQI-CSER-------GHCLC 610
CS C G C CHAG+ G +CN C+ + S C + G+ C ER +C C
Sbjct: 187 CSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCRERTFGARCDRYCQC 246
Query: 611 ---------GQCQCTEPGAFGEMC-EKCPTCPDACSTKRDCVEC 644
G C C EPG G+ C E CP +R C +C
Sbjct: 247 FRGRCHPVDGTCAC-EPGYRGKYCREPCPAGFYGLGCRRRCGQC 289
Score = 45.4 bits (106), Expect = 2e-04
Identities = 49/183 (26%), Positives = 65/183 (35%), Gaps = 42/183 (22%)
Query: 462 TCGCSVGL------EPNSARCNGSGTYV-CGLCE--------------CSPGYLGTRCE- 499
TC C G EP A G G CG C+ C PG+ GT+C+
Sbjct: 257 TCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKCDQ 316
Query: 500 -CQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCE--CDNFSCA 556
C G + C P C C+ C G I G CE C N +
Sbjct: 317 PCATGFYGEGCSHRC------PPCRDGHACNHVTGKCTRCNAGWI-GDRCETKCSNGTYG 369
Query: 557 RNKGVLCSGHGECHC----GECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQ 612
+ +C+ G HC G C C G G +CN ++ G G C++ C C +
Sbjct: 370 EDCAFVCADCGSGHCDFQSGRCLCSPGVHGPHCN----VTCPPGLHGADCAQA--CSCHE 423
Query: 613 CQC 615
C
Sbjct: 424 DTC 426
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,139,487
Number of Sequences: 37866
Number of extensions: 1742290
Number of successful extensions: 6715
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 273
Number of HSP's that attempted gapping in prelim test: 4232
Number of HSP's gapped (non-prelim): 1284
length of query: 799
length of database: 18,247,518
effective HSP length: 110
effective length of query: 689
effective length of database: 14,082,258
effective search space: 9702675762
effective search space used: 9702675762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.