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Search of human proteins with 198041662
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|198041662 pyrroline-5-carboxylate reductase-like [Homo
sapiens]
(286 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|198041662 pyrroline-5-carboxylate reductase-like [Homo sapiens] 562 e-160
gi|24797097 pyrroline-5-carboxylate reductase 1 isoform 1 [Homo ... 227 8e-60
gi|24797095 pyrroline-5-carboxylate reductase 1 isoform 2 [Homo ... 227 8e-60
gi|21361454 pyrroline-5-carboxylate reductase family, member 2 [... 224 7e-59
gi|164698426 hypothetical protein LOC122945 isoform 1 [Homo sapi... 48 9e-06
gi|20302040 hypothetical protein LOC122945 isoform 2 [Homo sapiens] 48 9e-06
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] 32 0.84
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 31 1.4
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 30 2.4
gi|156231067 TBC1 domain family, member 8 [Homo sapiens] 30 3.2
gi|239750748 PREDICTED: hypothetical protein XP_002347523 [Homo ... 29 4.1
gi|21237783 component of oligomeric golgi complex 1 [Homo sapiens] 29 4.1
gi|4507035 solute carrier family 5 (sodium iodide symporter), me... 29 5.4
gi|239755830 PREDICTED: hypothetical protein [Homo sapiens] 28 7.1
gi|239750331 PREDICTED: hypothetical protein [Homo sapiens] 28 7.1
gi|239744637 PREDICTED: hypothetical protein XP_002343209 [Homo ... 28 7.1
gi|115511046 zinc finger protein 258 [Homo sapiens] 28 7.1
gi|52317184 olfactory receptor, family 10, subfamily X, member 1... 28 7.1
gi|190343023 ATP-binding cassette, sub-family C, member 6 isofor... 28 9.2
gi|72534762 transmembrane protein 150A isoform 1 [Homo sapiens] 28 9.2
gi|239756495 PREDICTED: hypothetical protein [Homo sapiens] 28 9.2
gi|239752588 PREDICTED: hypothetical protein XP_002348309, parti... 28 9.2
gi|21071060 SWI/SNF-related matrix-associated actin-dependent re... 28 9.2
gi|187761314 SWI/SNF-related matrix-associated actin-dependent r... 28 9.2
>gi|198041662 pyrroline-5-carboxylate reductase-like [Homo sapiens]
Length = 286
Score = 562 bits (1449), Expect = e-160
Identities = 286/286 (100%), Positives = 286/286 (100%)
Query: 1 MGGERSGVRGNKMAAAEPSPRRVGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNL 60
MGGERSGVRGNKMAAAEPSPRRVGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNL
Sbjct: 1 MGGERSGVRGNKMAAAEPSPRRVGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNL 60
Query: 61 CHFQALGCRTTHSNQEVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLS 120
CHFQALGCRTTHSNQEVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLS
Sbjct: 61 CHFQALGCRTTHSNQEVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLS 120
Query: 121 TLEELLPPNTRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEA 180
TLEELLPPNTRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEA
Sbjct: 121 TLEELLPPNTRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEA 180
Query: 181 YVDIHTGLSGSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPA 240
YVDIHTGLSGSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPA
Sbjct: 181 YVDIHTGLSGSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPA 240
Query: 241 QLRSDVCTPGGTTIYGLHALEQGGLRAATMSAVEAATCRAKELSRK 286
QLRSDVCTPGGTTIYGLHALEQGGLRAATMSAVEAATCRAKELSRK
Sbjct: 241 QLRSDVCTPGGTTIYGLHALEQGGLRAATMSAVEAATCRAKELSRK 286
>gi|24797097 pyrroline-5-carboxylate reductase 1 isoform 1 [Homo
sapiens]
Length = 319
Score = 227 bits (579), Expect = 8e-60
Identities = 124/267 (46%), Positives = 172/267 (64%), Gaps = 7/267 (2%)
Query: 23 VGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNLCHFQAL---GCRTTHSNQEVLQ 79
VGF+GAG++A A+A+G AG + A I+AS+P D +L AL G + T N+E +Q
Sbjct: 3 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP-DMDLATVSALRKMGVKLTPHNKETVQ 61
Query: 80 SCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLP---PNTRVLRVL 136
++ A KPH++P +L E+ + HI+VS AAGV++S++E+ L P RV+R +
Sbjct: 62 HSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCM 121
Query: 137 PNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLSGSGVAFV 196
N P VV+EGA V A G H + +L++ LL + G C EV E +D TGLSGSG A+
Sbjct: 122 TNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYA 181
Query: 197 CAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPAQLRSDVCTPGGTTIYG 256
+ALA+G VKMG+P LA R+ AQ LLG AKMLLH QHP QL+ +V +PGG TI+
Sbjct: 182 FTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHA 241
Query: 257 LHALEQGGLRAATMSAVEAATCRAKEL 283
LH LE GG R+ ++AVEA+ R +EL
Sbjct: 242 LHVLESGGFRSLLINAVEASCIRTREL 268
>gi|24797095 pyrroline-5-carboxylate reductase 1 isoform 2 [Homo
sapiens]
Length = 316
Score = 227 bits (579), Expect = 8e-60
Identities = 124/267 (46%), Positives = 172/267 (64%), Gaps = 7/267 (2%)
Query: 23 VGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNLCHFQAL---GCRTTHSNQEVLQ 79
VGF+GAG++A A+A+G AG + A I+AS+P D +L AL G + T N+E +Q
Sbjct: 3 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP-DMDLATVSALRKMGVKLTPHNKETVQ 61
Query: 80 SCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLP---PNTRVLRVL 136
++ A KPH++P +L E+ + HI+VS AAGV++S++E+ L P RV+R +
Sbjct: 62 HSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCM 121
Query: 137 PNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLSGSGVAFV 196
N P VV+EGA V A G H + +L++ LL + G C EV E +D TGLSGSG A+
Sbjct: 122 TNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYA 181
Query: 197 CAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPAQLRSDVCTPGGTTIYG 256
+ALA+G VKMG+P LA R+ AQ LLG AKMLLH QHP QL+ +V +PGG TI+
Sbjct: 182 FTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHA 241
Query: 257 LHALEQGGLRAATMSAVEAATCRAKEL 283
LH LE GG R+ ++AVEA+ R +EL
Sbjct: 242 LHVLESGGFRSLLINAVEASCIRTREL 268
>gi|21361454 pyrroline-5-carboxylate reductase family, member 2
[Homo sapiens]
Length = 320
Score = 224 bits (571), Expect = 7e-59
Identities = 124/267 (46%), Positives = 172/267 (64%), Gaps = 7/267 (2%)
Query: 23 VGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNLCHFQAL---GCRTTHSNQEVLQ 79
VGF+GAG++A A+A+G AG + A I+AS+P + NL AL G T SN+E ++
Sbjct: 3 VGFIGAGQLAYALARGFTAAGILSAHKIIASSP-EMNLPTVSALRKMGVNLTRSNKETVK 61
Query: 80 SCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELL---PPNTRVLRVL 136
++ A KPH++P +L E+ V HI+VS AAGV++S++E+ L P +V+R +
Sbjct: 62 HSDVLFLAVKPHIIPFILDEIGADVQARHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCM 121
Query: 137 PNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLSGSGVAFV 196
N P VVQEGA V A G H + +LL+ L+ + G C EV E +D TGLSGSG A+
Sbjct: 122 TNTPVVVQEGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYA 181
Query: 197 CAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPAQLRSDVCTPGGTTIYG 256
+ALA+G VKMG+P LA ++ AQ LLG AKMLL QHP QL+ +VC+PGG TI+
Sbjct: 182 FMALDALADGGVKMGLPRRLAIQLGAQALLGAAKMLLDSEQHPCQLKDNVCSPGGATIHA 241
Query: 257 LHALEQGGLRAATMSAVEAATCRAKEL 283
LH LE GG R+ ++AVEA+ R +EL
Sbjct: 242 LHFLESGGFRSLLINAVEASCIRTREL 268
>gi|164698426 hypothetical protein LOC122945 isoform 1 [Homo
sapiens]
Length = 359
Score = 48.1 bits (113), Expect = 9e-06
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 15 AAEPSPRRVGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNLCHFQALGCRTTHSN 74
+A P +VG +G G + +A L++ G + A+ + S L Q LG + + N
Sbjct: 71 SATPEEFKVGIIGGGHLGKQLAGTLLQLGPIPAESLRISTRRPETLGELQKLGIKCFYHN 130
Query: 75 QEVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPNTRVLR 134
+++ ++ P LP + E+ + I+ S A + L L +LL +T +LR
Sbjct: 131 ADLVSWADVIFLCCLPSQLPNICVEIYTSLEKASIVYSFVAAIPLPRL-KLLLNHTNILR 189
>gi|20302040 hypothetical protein LOC122945 isoform 2 [Homo sapiens]
Length = 250
Score = 48.1 bits (113), Expect = 9e-06
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 15 AAEPSPRRVGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNLCHFQALGCRTTHSN 74
+A P +VG +G G + +A L++ G + A+ + S L Q LG + + N
Sbjct: 71 SATPEEFKVGIIGGGHLGKQLAGTLLQLGPIPAESLRISTRRPETLGELQKLGIKCFYHN 130
Query: 75 QEVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPNTRVLR 134
+++ ++ P LP + E+ + I+ S A + L L +LL +T +LR
Sbjct: 131 ADLVSWADVIFLCCLPSQLPNICVEIYTSLEKASIVYSFVAAIPLPRL-KLLLNHTNILR 189
>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 31.6 bits (70), Expect = 0.84
Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 132 VLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLSGS 191
VL+ LP P A ++ R +++ H+L C + PE +D+H GL
Sbjct: 234 VLQGLPRGPGTQVHLAYGLSSERQAAVPDSQHQVHIL-----CRDRPEHELDLHVGLWEG 288
Query: 192 GVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKML-LHEGQHPAQLRSDVCTPG 250
VA + L+ G + P L+ AQ + ML +H Q +L +
Sbjct: 289 KVAEGASQGSGLSTGPPSVQQPPHLSGSRRAQQVPVLQNMLQIHGAQWQTELTQGLMPRE 348
Query: 251 GTTIYGLHALEQGG 264
+ LH QGG
Sbjct: 349 ALEVEKLHL--QGG 360
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 30.8 bits (68), Expect = 1.4
Identities = 63/247 (25%), Positives = 93/247 (37%), Gaps = 49/247 (19%)
Query: 16 AEPSPRRVGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNLCHFQALGCRTTHSNQ 75
+ P PR F+GAG + GA+ +G G E + A L ALGCR T S
Sbjct: 298 SSPPPRP--FLGAGTLPGALLRG---QGSKELGVLWAP-----GLPKVTALGCRHTLS-- 345
Query: 76 EVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPNTRVLRV 135
+ S + +F + H+L + VA ++ T H PP + +
Sbjct: 346 -YITSLKMALFKSVRHILRSEQGHVA-LLRTGH------------------PPPSPFTTL 385
Query: 136 LPNLPCVVQEGAIVMA-----RGRHVGSSETKL-LQHLLEACGRCEEVPEAYVDIHTGLS 189
+ A++ A G+H+ L LQ +LEA G + A + L
Sbjct: 386 FDFCDFKTEPPALIQAPWGVHPGQHLPLQLIDLALQQILEAVGLAGGIEAAVL-----LR 440
Query: 190 GSGVAFVCAFSEA-----LAEGAVKMGMPSSLAHRIA-AQTLLGTAKMLLHEGQHPAQLR 243
G+ EA A GAV G R+A A G ++ G+ PA+LR
Sbjct: 441 GARAGETTPLGEARGPCWKARGAVPSGRLRGRPGRVAGASGRRGASQARGGTGRAPARLR 500
Query: 244 SDVCTPG 250
PG
Sbjct: 501 RGRGMPG 507
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 30.0 bits (66), Expect = 2.4
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 3 GERSGVRGNKMAAAEPSPRRVGFVGAGRMAGAIAQGLIRAGKVEAQHIL 51
G G G +A P PR G A G A GL+ GK ++ L
Sbjct: 29 GGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESL 77
>gi|156231067 TBC1 domain family, member 8 [Homo sapiens]
Length = 1140
Score = 29.6 bits (65), Expect = 3.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 10 GNKMAAAEPSPRRVGFVGAGRM---AGAIAQGLIRAGKVEAQHILASAPTDRNLCHF 63
G ++ A+ PSP F G+ + A + R V +HILAS T+++L +F
Sbjct: 1045 GEELRASAPSPEDSVFADTGKTPQDSQAFPEAAERDWTVSLEHILASLLTEQSLVNF 1101
>gi|239750748 PREDICTED: hypothetical protein XP_002347523 [Homo
sapiens]
Length = 260
Score = 29.3 bits (64), Expect = 4.1
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 67 GCRTTHSNQEVLQSCLLVIFATKPHVLPAV---LAEVAP----------VVTTEHILVSV 113
G S +++L + L +F TK HVLPA+ L E +P V+ TEH +++
Sbjct: 55 GAAAEESEEKILPAPELHLFQTKMHVLPALTLQLWEWSPSLGIPKCLYSVIRTEHTGLTM 114
Query: 114 AAGVSLSTLEELL 126
G+S L +L
Sbjct: 115 ELGLSWVFLVAIL 127
>gi|21237783 component of oligomeric golgi complex 1 [Homo sapiens]
Length = 980
Score = 29.3 bits (64), Expect = 4.1
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 89 KPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPNTRVLRVLPNLPCVVQEGAI 148
+PH + A++ +V + A + + E LLP P LPC + +
Sbjct: 244 QPHHGAGIKAQICSLVELLATTLKQAHALFYTLPEGLLPD--------PALPCGLLFSTL 295
Query: 149 VMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGL 188
G+H T +LQ ++ C + +P + V+ L
Sbjct: 296 ETITGQHPAGKGTGVLQEEMKLCSWFKHLPASIVEFQPTL 335
>gi|4507035 solute carrier family 5 (sodium iodide symporter),
member 5 [Homo sapiens]
Length = 643
Score = 28.9 bits (63), Expect = 5.4
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 77 VLQSCLLVIFATKPHVLPA-VLAEVAPVVTTEHILVSVAAGVSLSTL----EELLPPNTR 131
VLQ V+ +L A +L P T +L + AG++LS L PP+ +
Sbjct: 412 VLQGSFTVMGVISGPLLGAFILGMFLPACNTPGVLAGLGAGLALSLWVALGATLYPPSEQ 471
Query: 132 VLRVLPN 138
+RVLP+
Sbjct: 472 TMRVLPS 478
>gi|239755830 PREDICTED: hypothetical protein [Homo sapiens]
Length = 232
Score = 28.5 bits (62), Expect = 7.1
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 19 SPRRVGFVGAGRMAGAIAQGLIRAGKV--EAQHILASAP 55
SPR VG G G+ A+G+ AGKV E +++L + P
Sbjct: 113 SPRAVGLARTGPEEGSKAKGVSAAGKVQREVENMLETRP 151
>gi|239750331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 232
Score = 28.5 bits (62), Expect = 7.1
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 19 SPRRVGFVGAGRMAGAIAQGLIRAGKV--EAQHILASAP 55
SPR VG G G+ A+G+ AGKV E +++L + P
Sbjct: 113 SPRAVGLARTGPEEGSKAKGVSAAGKVQREVENMLETRP 151
>gi|239744637 PREDICTED: hypothetical protein XP_002343209 [Homo
sapiens]
Length = 232
Score = 28.5 bits (62), Expect = 7.1
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 19 SPRRVGFVGAGRMAGAIAQGLIRAGKV--EAQHILASAP 55
SPR VG G G+ A+G+ AGKV E +++L + P
Sbjct: 113 SPRAVGLARTGPEEGSKAKGVSAAGKVQREVENMLETRP 151
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 28.5 bits (62), Expect = 7.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 59 NLCHFQALGCRTTHSNQEVLQSCL----LVIFATKPHV--LPAVLAEVAPVVTTEHILVS 112
N+ HF L C +Q+++ CL + I K V LP+ + PV+T+ L
Sbjct: 577 NIKHFCNLFCVLEFCHQQIMNDCLPQNKVNISKAKTAVTELPSARTDTTPVITSVMSLAK 636
Query: 113 VAAGVSLSTLEELL 126
+ A +S +L
Sbjct: 637 IPATLSTGNTNSVL 650
>gi|52317184 olfactory receptor, family 10, subfamily X, member 1
[Homo sapiens]
Length = 326
Score = 28.5 bits (62), Expect = 7.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 61 CHFQALGCRTTHSNQEVLQSCLLVIFATKPHV 92
C FQ +T NQ +L+ +LV F+ PHV
Sbjct: 8 CFFQISDIQTMKINQTILKEFILVGFSVYPHV 39
>gi|190343023 ATP-binding cassette, sub-family C, member 6 isoform 1
[Homo sapiens]
Length = 1503
Score = 28.1 bits (61), Expect = 9.2
Identities = 54/198 (27%), Positives = 77/198 (38%), Gaps = 44/198 (22%)
Query: 74 NQEVLQSCLLVIF----ATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPN 129
N V Q CLL + A K +L A+L E++ V VS+ V+ +E N
Sbjct: 650 NLTVPQGCLLAVVGPVGAGKSSLLSALLGELSKVEG----FVSIEGAVAYVP-QEAWVQN 704
Query: 130 TRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLS 189
T V+ + C QE + L+ +LEAC +V IHT +
Sbjct: 705 TSVVENV----CFGQE-------------LDPPWLERVLEACALQPDVDSFPEGIHTSIG 747
Query: 190 GSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLG--TAKMLLHEGQHPAQLRSDVC 247
G+ L+ G + + +R AA LL A + H GQH + + V
Sbjct: 748 EQGM--------NLSGGQKQRLSLARAVYRKAAVYLLDDPLAALDAHVGQH---VFNQVI 796
Query: 248 TPGG-----TTIYGLHAL 260
PGG T I HAL
Sbjct: 797 GPGGLLQGTTRILVTHAL 814
>gi|72534762 transmembrane protein 150A isoform 1 [Homo sapiens]
Length = 271
Score = 28.1 bits (61), Expect = 9.2
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 25/169 (14%)
Query: 127 PPNTRVLRVLPN-------LPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPE 179
PP + + ++ N L C+++ G + + + RH + T L+ A G V
Sbjct: 73 PPESCLFSLIGNMGAFMVALICLLRYGQL-LEQSRHSWVNTTALITGCTNAAGLLV-VGN 130
Query: 180 AYVDIHTGLS--GSGVAF------VCAFSEALAEGA-----VKMGMPSSLAHRIAAQTLL 226
VD L G+GVAF VC +GA + + S+ IA TL+
Sbjct: 131 FQVDHARSLHYVGAGVAFPAGLLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIAFITLV 190
Query: 227 GTAKMLLHEG---QHPAQLRSDVCTPGGTTIYGLHALEQGGLRAATMSA 272
+ +HE QH A L VC YG + E G + + T+ A
Sbjct: 191 LSGVFFVHESSQLQHGAALCEWVCVIDILIFYGTFSYEFGAVSSDTLVA 239
>gi|239756495 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1312
Score = 28.1 bits (61), Expect = 9.2
Identities = 54/198 (27%), Positives = 77/198 (38%), Gaps = 44/198 (22%)
Query: 74 NQEVLQSCLLVIF----ATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPN 129
N V Q CLL + A K +L A+L E++ V VS+ V+ +E N
Sbjct: 459 NLTVPQGCLLAVVGPVGAGKSSLLSALLGELSKVEG----FVSIEGAVAYVP-QEAWVQN 513
Query: 130 TRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLS 189
T V+ + C QE + L+ +LEAC +V IHT +
Sbjct: 514 TSVVENV----CFGQE-------------LDPPWLERVLEACALQPDVDSFPEGIHTSIG 556
Query: 190 GSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLG--TAKMLLHEGQHPAQLRSDVC 247
G+ L+ G + + +R AA LL A + H GQH + + V
Sbjct: 557 EQGM--------NLSGGQKQRLSLARAVYRKAAVYLLDDPLAALDAHVGQH---VFNQVI 605
Query: 248 TPGG-----TTIYGLHAL 260
PGG T I HAL
Sbjct: 606 GPGGLLQGTTRILVTHAL 623
>gi|239752588 PREDICTED: hypothetical protein XP_002348309, partial
[Homo sapiens]
Length = 327
Score = 28.1 bits (61), Expect = 9.2
Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 11/96 (11%)
Query: 170 ACGRCEEVPEAYVDIHTGLSGSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTA 229
A G C P HTG G+G+ A G++ G S R
Sbjct: 72 AHGGCHPAPSCIAFAHTGAWGTGLP---APHVPCTPGSLPQGAFVSQGAR--------AV 120
Query: 230 KMLLHEGQHPAQLRSDVCTPGGTTIYGLHALEQGGL 265
+L G PA+ S T GG Y AL +G L
Sbjct: 121 PVLQPSGATPAEGISQPATAGGDFAYATPALPEGAL 156
>gi|21071060 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a-like 1 [Homo sapiens]
Length = 954
Score = 28.1 bits (61), Expect = 9.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 226 LGTAKMLLHEGQHPAQLRSDVCTPGGTTIYGLHALEQGGLRAATMSAVEAATCRAKELSR 285
LG K+LL E +L+SDV + + + G + A T +A++AA AKE++
Sbjct: 630 LGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAA---AKEMTT 686
Query: 286 K 286
K
Sbjct: 687 K 687
>gi|187761314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a-like 1 [Homo sapiens]
Length = 954
Score = 28.1 bits (61), Expect = 9.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 226 LGTAKMLLHEGQHPAQLRSDVCTPGGTTIYGLHALEQGGLRAATMSAVEAATCRAKELSR 285
LG K+LL E +L+SDV + + + G + A T +A++AA AKE++
Sbjct: 630 LGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAA---AKEMTT 686
Query: 286 K 286
K
Sbjct: 687 K 687
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,700,018
Number of Sequences: 37866
Number of extensions: 462026
Number of successful extensions: 1225
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1208
Number of HSP's gapped (non-prelim): 25
length of query: 286
length of database: 18,247,518
effective HSP length: 101
effective length of query: 185
effective length of database: 14,423,052
effective search space: 2668264620
effective search space used: 2668264620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.