Guide to the Human Genome
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Name: PYCRL Sequence: fasta or formatted (286aa) NCBI GI: 198041662
Description:

pyrroline-5-carboxylate reductase-like

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.6         39           3
 C cysteine            3.1          9           1
 D aspartate           1.0          3           1
 E glutamate           7.0         20           2
 F phenylalanine       1.7          5           1
 G glycine             9.8         28           2
 H histidine           4.2         12           1
 I isoleucine          3.1          9           1
 K lysine              2.8          8           1
 L leucine            11.5         33           2
 M methionine          2.8          8           1
 N asparagine          1.7          5           1
 P proline             4.9         14           2
 Q glutamine           3.8         11           1
 R arginine            6.3         18           2
 S serine              6.3         18           2
 T threonine           5.9         17           2
 V valine              9.4         27           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pyrroline-5-carboxylate reductase-like 
PYCR1                 0.376   pyrroline-5-carboxylate reductase 1 isoform 1 
PYCR1                 0.376   pyrroline-5-carboxylate reductase 1 isoform 2 
PYCR2                 0.371   pyrroline-5-carboxylate reductase family, member 2 [...
C14orf148             0.043   hypothetical protein LOC122945 isoform 1 
C14orf148             0.043   hypothetical protein LOC122945 isoform 2 
LOC100294438          0.013   PREDICTED: hypothetical protein 
LOC100291076          0.011   PREDICTED: hypothetical protein XP_002347846 
ZSWIM6                0.009   zinc finger, SWIM-type containing 6 
TBC1D8                0.009   TBC1 domain family, member 8 
LOC100290115          0.007   PREDICTED: hypothetical protein XP_002347523 
COG1                  0.007   component of oligomeric golgi complex 1 
SLC5A5                0.007   solute carrier family 5 (sodium iodide symporter), me...
LOC100292658          0.006   PREDICTED: hypothetical protein 
LOC100288977          0.006   PREDICTED: hypothetical protein 
LOC100288977          0.006   PREDICTED: hypothetical protein XP_002343209 
ZMYM6                 0.006   zinc finger protein 258 
OR10X1                0.006   olfactory receptor, family 10, subfamily X, member 1...
ABCC6                 0.006   ATP-binding cassette, sub-family C, member 6 isofor...
TMEM150A              0.006   transmembrane protein 150A isoform 1 
LOC100292715          0.006   PREDICTED: hypothetical protein 
LOC100290397          0.006   PREDICTED: hypothetical protein XP_002348309, parti...
SMARCAL1              0.006   SWI/SNF-related matrix-associated actin-dependent re...
SMARCAL1              0.006   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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