Guide to the Human Genome
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Name: PYCR2 Sequence: fasta or formatted (320aa) NCBI GI: 21361454
Description:

pyrroline-5-carboxylate reductase family, member 2

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.9         38           2
 C cysteine            1.9          6           1
 D aspartate           4.1         13           1
 E glutamate           5.0         16           2
 F phenylalanine       2.8          9           1
 G glycine             8.4         27           2
 H histidine           2.5          8           1
 I isoleucine          5.3         17           2
 K lysine              5.6         18           2
 L leucine            12.5         40           2
 M methionine          3.1         10           1
 N asparagine          1.9          6           1
 P proline             4.7         15           1
 Q glutamine           3.8         12           1
 R arginine            3.8         12           2
 S serine              8.1         26           2
 T threonine           5.9         19           1
 V valine              7.8         25           3
 W tryptophan          0.0          0           0
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pyrroline-5-carboxylate reductase family, member 2 [... 
PYCR1                 0.848   pyrroline-5-carboxylate reductase 1 isoform 1 
PYCR1                 0.801   pyrroline-5-carboxylate reductase 1 isoform 2 
PYCRL                 0.336   pyrroline-5-carboxylate reductase-like 
C14orf148             0.032   hypothetical protein LOC122945 isoform 1 
C14orf148             0.032   hypothetical protein LOC122945 isoform 2 
FAM98B                0.010   family with sequence similarity 98, member B isofor...
FAM98B                0.010   family with sequence similarity 98, member B isofor...
NOVA1                 0.008   neuro-oncological ventral antigen 1 isoform 1 
NOVA1                 0.008   neuro-oncological ventral antigen 1 isoform 3 
GPD1L                 0.005   glycerol-3-phosphate dehydrogenase 1-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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