Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TMEM150A Sequence: fasta or formatted (271aa) NCBI GI: 72534762
Description:

transmembrane protein 150A isoform 1

Referenced in:

Additional Stress Response Functions
p53 Pathway

Other entries for this name:
alt prot [218aa] transmembrane protein 150A isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         29           2
 C cysteine            5.2         14           2
 D aspartate           2.6          7           2
 E glutamate           3.3          9           1
 F phenylalanine       4.4         12           2
 G glycine             7.4         20           2
 H histidine           3.3          9           2
 I isoleucine          5.2         14           1
 K lysine              1.1          3           1
 L leucine            11.8         32           2
 M methionine          2.2          6           1
 N asparagine          3.0          8           1
 P proline             5.2         14           2
 Q glutamine           3.0          8           1
 R arginine            1.8          5           1
 S serine             10.0         27           3
 T threonine           5.9         16           2
 V valine              8.9         24           2
 W tryptophan          1.8          5           1
 Y tyrosine            3.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 150A isoform 1 
TMEM150A              0.633   transmembrane protein 150A isoform 2 
TMEM150B              0.173   transmembrane protein 150B 
FLJ12993              0.150   hypothetical protein LOC441027 
DRAM1                 0.083   DNA-damage regulated autophagy modulator 1 
DRAM2                 0.058   transmembrane protein 77 
SLC7A4                0.009   solute carrier family 7 (cationic amino acid transp...
UNC84B                0.009   unc-84 homolog B 
CR2                   0.008   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.008   complement component (3d/Epstein Barr virus) recepto...
CUBN                  0.008   cubilin 
LOC728931             0.006   PREDICTED: similar to hCG17429 
LOC728931             0.006   PREDICTED: similar to hCG17429 
LOC728931             0.006   PREDICTED: similar to hCG17429 
ARMC5                 0.006   armadillo repeat containing 5 isoform b 
ARMC5                 0.006   armadillo repeat containing 5 isoform a 
SLC2A10               0.006   solute carrier family 2 member 10 
PYCRL                 0.006   pyrroline-5-carboxylate reductase-like 
KCNU1                 0.006   potassium channel, subfamily U, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press