Search of human proteins with 197313781

Search of human proteins with 197313781

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|197313781 transmembrane protein 130 isoform c [Homo sapiens]
         (321 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|197313781 transmembrane protein 130 isoform c [Homo sapiens]       665   0.0  
gi|23097274 transmembrane protein 130 isoform b [Homo sapiens]        607   e-174
gi|197313779 transmembrane protein 130 isoform a [Homo sapiens]       598   e-171
gi|4505405 glycoprotein (transmembrane) nmb isoform b precursor ...    50   4e-06
gi|52694752 glycoprotein (transmembrane) nmb isoform a precursor...    46   4e-05
gi|5902084 silver homolog [Homo sapiens]                               39   0.008
gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]           38   0.014
gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]           38   0.014
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...    32   0.76 
gi|45594312 TNF receptor-associated factor 7 [Homo sapiens]            30   2.2  
gi|6005810 mitogen-activated protein kinase kinase kinase kinase...    30   2.2  
gi|116006953 polycystin 1-like 2 isoform c [Homo sapiens]              30   2.2  
gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens]              30   2.2  
gi|253970427 immunoglobulin superfamily, member 22 [Homo sapiens]      29   4.9  
gi|27894376 cell adhesion molecule with homology to L1CAM precur...    29   4.9  
gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo sa...    29   4.9  
gi|19923084 polycystin-1L1 [Homo sapiens]                              29   6.4  
gi|8923870 solute carrier family 22 member 11 [Homo sapiens]           28   8.4  
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi...    28   8.4  
gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo sap...    28   8.4  

>gi|197313781 transmembrane protein 130 isoform c [Homo sapiens]
          Length = 321

 Score =  665 bits (1716), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MAQAVWSRLGRILWLACLLPWAPAGVAAEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFL 60
           MAQAVWSRLGRILWLACLLPWAPAGVAAEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFL
Sbjct: 1   MAQAVWSRLGRILWLACLLPWAPAGVAAEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFL 60

Query: 61  LHDPSNFLKTALFLYSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDAT 120
           LHDPSNFLKTALFLYSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDAT
Sbjct: 61  LHDPSNFLKTALFLYSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDAT 120

Query: 121 RAVKQKTGDFSASLKLQETLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECL 180
           RAVKQKTGDFSASLKLQETLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECL
Sbjct: 121 RAVKQKTGDFSASLKLQETLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECL 180

Query: 181 PLEEGECHPVSVASTAYNLTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVF 240
           PLEEGECHPVSVASTAYNLTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVF
Sbjct: 181 PLEEGECHPVSVASTAYNLTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVF 240

Query: 241 AFPCATLITVMLAFIMYMTLRNATQQKDMVENPEPPSGVRCCCQMCCGPFLLETPSEYLE 300
           AFPCATLITVMLAFIMYMTLRNATQQKDMVENPEPPSGVRCCCQMCCGPFLLETPSEYLE
Sbjct: 241 AFPCATLITVMLAFIMYMTLRNATQQKDMVENPEPPSGVRCCCQMCCGPFLLETPSEYLE 300

Query: 301 IVRENHGLLPPLYKSVKTYTV 321
           IVRENHGLLPPLYKSVKTYTV
Sbjct: 301 IVRENHGLLPPLYKSVKTYTV 321


>gi|23097274 transmembrane protein 130 isoform b [Homo sapiens]
          Length = 423

 Score =  607 bits (1564), Expect = e-174
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 29  EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE 88
           EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE
Sbjct: 131 EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE 190

Query: 89  DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP 148
           DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP
Sbjct: 191 DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP 250

Query: 149 TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD 208
           TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD
Sbjct: 251 TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD 310

Query: 209 YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD 268
           YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD
Sbjct: 311 YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD 370

Query: 269 MVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKTYTV 321
           MVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKTYTV
Sbjct: 371 MVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKTYTV 423



 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)

Query: 1  MAQAVWSRLGRILWLACLLPWAPAGVAA 28
          MAQAVWSRLGRILWLACLLPWAPAGVAA
Sbjct: 1  MAQAVWSRLGRILWLACLLPWAPAGVAA 28


>gi|197313779 transmembrane protein 130 isoform a [Homo sapiens]
          Length = 435

 Score =  598 bits (1541), Expect = e-171
 Identities = 293/305 (96%), Positives = 293/305 (96%), Gaps = 12/305 (3%)

Query: 29  EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE 88
           EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE
Sbjct: 131 EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE 190

Query: 89  DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP 148
           DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP
Sbjct: 191 DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP 250

Query: 149 TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD 208
           TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD
Sbjct: 251 TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD 310

Query: 209 YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD 268
           YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD
Sbjct: 311 YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD 370

Query: 269 MVE------------NPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSV 316
           MVE            NPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSV
Sbjct: 371 MVEVADFDFSPMSDKNPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSV 430

Query: 317 KTYTV 321
           KTYTV
Sbjct: 431 KTYTV 435



 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)

Query: 1  MAQAVWSRLGRILWLACLLPWAPAGVAA 28
          MAQAVWSRLGRILWLACLLPWAPAGVAA
Sbjct: 1  MAQAVWSRLGRILWLACLLPWAPAGVAA 28


>gi|4505405 glycoprotein (transmembrane) nmb isoform b precursor
           [Homo sapiens]
          Length = 560

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 41/205 (20%)

Query: 48  SYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQM-VTEDSVVYYNYSIIGTFTVKL 106
           ++L    +    L+HDPS+FL  +   Y W FGD T + V+ +  V + Y + GTF++ L
Sbjct: 254 TFLKDLPIMFDVLIHDPSHFLNYSTINYKWSFGDNTGLFVSTNHTVNHTYVLNGTFSLNL 313

Query: 107 KVVA------------------------------EWEEVEPDATRAVKQKTGDFSASLKL 136
            V A                              E   + PD    +  + G F A++ +
Sbjct: 314 TVKAAAPGPCPPPPPPPRPSKPTPSLGPAGDNPLELSRI-PDENCQI-NRYGHFQATITI 371

Query: 137 QETLRGIQVLGPT--LIQTFQKMTVTLNFL----GSPPLTVCWRLK-PECLPLEEGECHP 189
            E +  + ++  T  L+      +  ++F+    GS P  VC  +  P C   +   C P
Sbjct: 372 VEGILEVNIIQMTDVLMPVPWPESSLIDFVVTCQGSIPTEVCTIISDPTCEITQNTVCSP 431

Query: 190 VSVASTA-YNLTHTFRDPGDYCFSI 213
           V V       +  TF   G YC ++
Sbjct: 432 VDVDEMCLLTVRRTFNGSGTYCVNL 456


>gi|52694752 glycoprotein (transmembrane) nmb isoform a precursor
           [Homo sapiens]
          Length = 572

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 48  SYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQM-VTEDSVVYYNYSIIGTFTVKL 106
           ++L    +    L+HDPS+FL  +   Y W FGD T + V+ +  V + Y + GTF++ L
Sbjct: 254 TFLKDLPIMFDVLIHDPSHFLNYSTINYKWSFGDNTGLFVSTNHTVNHTYVLNGTFSLNL 313

Query: 107 KVVA 110
            V A
Sbjct: 314 TVKA 317


>gi|5902084 silver homolog [Homo sapiens]
          Length = 661

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 49  YLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGT-QMVTEDSVVYYNYSIIGTFTVKLK 107
           +L    L  +  LHDPS +L  A   Y+WDFGD +  +++   VV + Y   G  T ++ 
Sbjct: 232 FLRNQPLTFALQLHDPSGYLAEADLSYTWDFGDSSGTLISRALVVTHTYLEPGPVTAQVV 291

Query: 108 VVA 110
           + A
Sbjct: 292 LQA 294


>gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]
          Length = 4302

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 74   LYSWDFGDGTQMVTEDS-VVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSA 132
            LY+WDFGDG+ ++T+      + Y+  GT+ V+L+V          A   V ++    S 
Sbjct: 1158 LYTWDFGDGSPVLTQSQPAANHTYASRGTYHVRLEVNNTVSGAAAQADVRVFEELRGLSV 1217

Query: 133  SLKLQETLRGIQVLGPTLIQTFQKMTVTLNF-----LGSPPLTV 171
             + L    +G  V+    +QT   +T T +      L  P  TV
Sbjct: 1218 DMSL-AVEQGAPVVVSAAVQTGDNITWTFDMGDGTVLSGPEATV 1260



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 27/144 (18%)

Query: 75   YSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASL 134
            Y WD GDG  +  E   V + Y+  G FTV+   VA W EV             +   ++
Sbjct: 1498 YLWDLGDGGWL--EGPEVTHAYNSTGDFTVR---VAGWNEV----------SRSEAWLNV 1542

Query: 135  KLQETLRGIQV-LGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVA 193
             ++  +RG+ V    T++     ++ + +      +   W L   C P+  G        
Sbjct: 1543 TVKRRVRGLVVNASRTVVPLNGSVSFSTSLEAGSDVRYSWVLCDRCTPIPGGP------- 1595

Query: 194  STAYNLTHTFRDPGDYCFSIRAEN 217
                 +++TFR  G +   + AEN
Sbjct: 1596 ----TISYTFRSVGTFNIIVTAEN 1615



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 24/179 (13%)

Query: 74   LYSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSAS 133
            ++ W   D   +  ++ V    Y     F + L            A+  V   T +++ +
Sbjct: 964  VFRWTINDKQSLTFQNVVFNVIYQSAAVFKLSLT-----------ASNHVSNVTVNYNVT 1012

Query: 134  LKLQETLRGIQVLG-PTLIQTFQKMTVTLNFLGSPPLTVC--WRLKPECLPLEE-----G 185
            ++    ++G+QV   P ++     + +T   L    + V   W        L +      
Sbjct: 1013 VERMNRMQGLQVSTVPAVLSPNATLALTAGVLVDSAVEVAFLWTFGDGEQALHQFQPPYN 1072

Query: 186  ECHPVSVASTA-----YNLTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAV 239
            E  PV   S A     +N+ HT+  PG+Y  ++ A N      Q   + V  S    AV
Sbjct: 1073 ESFPVPDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENLTQQVPVSVRASLPSVAV 1131


>gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]
          Length = 4303

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 74   LYSWDFGDGTQMVTEDS-VVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSA 132
            LY+WDFGDG+ ++T+      + Y+  GT+ V+L+V          A   V ++    S 
Sbjct: 1158 LYTWDFGDGSPVLTQSQPAANHTYASRGTYHVRLEVNNTVSGAAAQADVRVFEELRGLSV 1217

Query: 133  SLKLQETLRGIQVLGPTLIQTFQKMTVTLNF-----LGSPPLTV 171
             + L    +G  V+    +QT   +T T +      L  P  TV
Sbjct: 1218 DMSL-AVEQGAPVVVSAAVQTGDNITWTFDMGDGTVLSGPEATV 1260



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 27/144 (18%)

Query: 75   YSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASL 134
            Y WD GDG  +  E   V + Y+  G FTV+   VA W EV             +   ++
Sbjct: 1498 YLWDLGDGGWL--EGPEVTHAYNSTGDFTVR---VAGWNEV----------SRSEAWLNV 1542

Query: 135  KLQETLRGIQV-LGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVA 193
             ++  +RG+ V    T++     ++ + +      +   W L   C P+  G        
Sbjct: 1543 TVKRRVRGLVVNASRTVVPLNGSVSFSTSLEAGSDVRYSWVLCDRCTPIPGGP------- 1595

Query: 194  STAYNLTHTFRDPGDYCFSIRAEN 217
                 +++TFR  G +   + AEN
Sbjct: 1596 ----TISYTFRSVGTFNIIVTAEN 1615



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 24/179 (13%)

Query: 74   LYSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSAS 133
            ++ W   D   +  ++ V    Y     F + L            A+  V   T +++ +
Sbjct: 964  VFRWTINDKQSLTFQNVVFNVIYQSAAVFKLSLT-----------ASNHVSNVTVNYNVT 1012

Query: 134  LKLQETLRGIQVLG-PTLIQTFQKMTVTLNFLGSPPLTVC--WRLKPECLPLEE-----G 185
            ++    ++G+QV   P ++     + +T   L    + V   W        L +      
Sbjct: 1013 VERMNRMQGLQVSTVPAVLSPNATLALTAGVLVDSAVEVAFLWTFGDGEQALHQFQPPYN 1072

Query: 186  ECHPVSVASTA-----YNLTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAV 239
            E  PV   S A     +N+ HT+  PG+Y  ++ A N      Q   + V  S    AV
Sbjct: 1073 ESFPVPDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENLTQQVPVSVRASLPSVAV 1131


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
            sapiens]
          Length = 2997

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 35   LVVTQNTSLP-WPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTEDSVVY 93
            LV+   +++P W   + T T L V  +++  S   +  + LY   F D    V + S  Y
Sbjct: 1020 LVIAPLSTIPNWEREFRTWTELNV--VVYHGSQASRRTIQLYEMYFKDPQGRVIKGS--Y 1075

Query: 94   YNYSIIGTFTVKLKVVAE-----WEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP 148
              ++II TF + L    E     W  V  D    +K +       LK+ +    + + G 
Sbjct: 1076 KFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGT 1135

Query: 149  TLIQTFQKMTVTLNFL 164
             L  T +++   L+FL
Sbjct: 1136 PLQNTVEELFSLLHFL 1151


>gi|45594312 TNF receptor-associated factor 7 [Homo sapiens]
          Length = 670

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 7/39 (17%)

Query: 258 MTLRNATQQKDMVENPEP------PSGVRCCCQMCCGPF 290
           M+LR+     +  E PEP      PS V+ CCQ+CC  F
Sbjct: 101 MSLRSTFSLPEEEEEPEPLVFAEQPS-VKLCCQLCCSVF 138


>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
           isoform 2 [Homo sapiens]
          Length = 833

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 118 DATRAVKQKTGDFSASLKLQETLRGIQV--LGPT-LIQTFQKMTVTLNFLGSPPLTVCWR 174
           +A  AV    G   A  K      G+QV  LG   L+Q  +  T+T   LGSP L     
Sbjct: 751 EAVEAVAMVGGQLQAFWK-----HGVQVWALGSDQLLQELRDPTLTFRLLGSPRLECSGT 805

Query: 175 LKPECLPLEEGECHPVSVASTAYNLT 200
           + P C  L  G  +  + AS    +T
Sbjct: 806 ISPHCNLLLPGSSNSPASASRVAGIT 831


>gi|116006953 polycystin 1-like 2 isoform c [Homo sapiens]
          Length = 991

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 154 FQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECH---PVSVASTAYNLTHTFRDPGDYC 210
           F  +T++L +L SP +         C+ +  G+ H   P +  S + N+TH F  PG+  
Sbjct: 266 FDNVTISLTWLLSPYIG-----NLSCI-ISTGDSHTFDPYNPPSVSSNVTHQFTSPGE-- 317

Query: 211 FSIRAENIISKTHQYHKIQV 230
           F++ AE   S+ H   + QV
Sbjct: 318 FTVFAECTTSEWHVTAQRQV 337


>gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens]
          Length = 2459

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 154 FQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECH---PVSVASTAYNLTHTFRDPGDYC 210
           F  +T++L +L SP +         C+ +  G+ H   P +  S + N+TH F  PG+  
Sbjct: 266 FDNVTISLTWLLSPYIG-----NLSCI-ISTGDSHTFDPYNPPSVSSNVTHQFTSPGE-- 317

Query: 211 FSIRAENIISKTHQYHKIQV 230
           F++ AE   S+ H   + QV
Sbjct: 318 FTVFAECTTSEWHVTAQRQV 337


>gi|253970427 immunoglobulin superfamily, member 22 [Homo sapiens]
          Length = 1326

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 27/114 (23%)

Query: 124  KQKTGDFSASLKLQETL------RGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKP 177
            K +  D SA LK  E        R +  L P  +   Q  T+T  FLG+P  TV      
Sbjct: 1191 KDQIQDLSAKLKPYEKKDWRHAPRFVTPLKPHTVLRGQDCTMTCAFLGNPRPTV------ 1244

Query: 178  ECLPLEEGECHPVSVASTAYNLTH----------TFRDPGDYCFSIRAENIISK 221
                L +G+ +  + +   YN T           T +D GDY  S+  EN + K
Sbjct: 1245 ---TLYKGDVNITANSKFWYNSTSGVCTLVIPTCTLKDSGDY--SVLVENELGK 1293


>gi|27894376 cell adhesion molecule with homology to L1CAM precursor
           [Homo sapiens]
          Length = 1224

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 163 FLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGDYCFSIRAENIISKT 222
           F  SP   V W+   E  PLE    H     +   N T T  D G Y  S   EN I KT
Sbjct: 463 FFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRT-TEEDAGSY--SCWVENAIGKT 519


>gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo
           sapiens]
          Length = 271

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 18/56 (32%), Positives = 25/56 (44%)

Query: 86  VTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLR 141
           + E S++       G  TV +K    WE  +   T  V   TG+ S S+KL   LR
Sbjct: 174 IPEGSILATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNKSLSVKLNSGLR 229


>gi|19923084 polycystin-1L1 [Homo sapiens]
          Length = 2849

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 75  YSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKL 106
           Y WDFGDGT  +   S  +  YS  G FTV++
Sbjct: 622 YLWDFGDGTVSLGSSSSSHV-YSREGEFTVEV 652


>gi|8923870 solute carrier family 22 member 11 [Homo sapiens]
          Length = 550

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 138 ETLRGIQVLGPTLI-QTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTA 196
           + + G+ +L   L+ Q  Q + V    LG      C+ +   CL + + E  P  V  TA
Sbjct: 409 QAMAGLAILANMLVPQDLQTLRVVFAVLGKG----CFGISLTCLTIYKAELFPTPVRMTA 464

Query: 197 YNLTHT 202
             + HT
Sbjct: 465 DGILHT 470


>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
           sapiens]
          Length = 848

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 30/192 (15%)

Query: 81  DGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETL 140
           DG Q+  E+    Y +S   +  + +K V + +E E       K    D +  LK+    
Sbjct: 250 DGEQIEQEEDDEKYIFSDDSS-QLTIKKVDKNDEAEYICIAENKAGEQDATIHLKVFAKP 308

Query: 141 RGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEG--------ECHPVSV 192
           +   V   T ++  +++T+T    G P  ++ WR     +  EE           H    
Sbjct: 309 KITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKTLDGHMVVRSHARVS 368

Query: 193 ASTAYNLTHTFRDPGDYCFSIRAENIISKTHQ--YHKIQVWPSRIQPA------------ 238
           + T  ++ +T  D G+Y  +  A N I +  Q  Y ++Q  P    P             
Sbjct: 369 SLTLKSIQYT--DAGEYICT--ASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNI 424

Query: 239 ---VFAFPCATL 247
              VFA+P AT+
Sbjct: 425 TCEVFAYPSATI 436


>gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo
           sapiens]
          Length = 761

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 30/192 (15%)

Query: 81  DGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETL 140
           DG Q+  E+    Y +S   +  + +K V + +E E       K    D +  LK+    
Sbjct: 250 DGEQIEQEEDDEKYIFSDDSS-QLTIKKVDKNDEAEYICIAENKAGEQDATIHLKVFAKP 308

Query: 141 RGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEG--------ECHPVSV 192
           +   V   T ++  +++T+T    G P  ++ WR     +  EE           H    
Sbjct: 309 KITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKTLDGHMVVRSHARVS 368

Query: 193 ASTAYNLTHTFRDPGDYCFSIRAENIISKTHQ--YHKIQVWPSRIQPA------------ 238
           + T  ++ +T  D G+Y  +  A N I +  Q  Y ++Q  P    P             
Sbjct: 369 SLTLKSIQYT--DAGEYICT--ASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNI 424

Query: 239 ---VFAFPCATL 247
              VFA+P AT+
Sbjct: 425 TCEVFAYPSATI 436


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,959,718
Number of Sequences: 37866
Number of extensions: 573164
Number of successful extensions: 1493
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1459
Number of HSP's gapped (non-prelim): 43
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.