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Search of human proteins with 197100230
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197100230 acid phosphatase 2, lysosomal isoform 2 [Homo
sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197100230 acid phosphatase 2, lysosomal isoform 2 [Homo sapiens] 336 6e-93
gi|4557010 acid phosphatase 2, lysosomal isoform 1 precursor [Ho... 316 6e-87
gi|197116348 acid phosphatase, prostate long isoform precursor [... 175 2e-44
gi|6382064 acid phosphatase, prostate short isoform precursor [H... 175 2e-44
gi|14861860 testicular acid phosphatase precursor [Homo sapiens] 149 1e-36
gi|151301213 acid phosphatase 6, lysophosphatidic [Homo sapiens] 55 3e-08
gi|81295410 acid phosphatase-like 2 [Homo sapiens] 43 1e-04
gi|22748649 acid phosphatase-like 2 [Homo sapiens] 43 1e-04
gi|156104886 CC chemokine receptor 10 [Homo sapiens] 30 0.88
gi|4503057 crystallin, alpha B [Homo sapiens] 29 2.0
gi|41281583 Histidine acid phosphatase domain containing 1 [Homo... 28 3.4
gi|154124881 kinesin family member 25 isoform 2 [Homo sapiens] 28 4.4
gi|154124879 kinesin family member 25 isoform 1 [Homo sapiens] 28 4.4
gi|148612863 transient receptor potential cation channel, subfam... 27 5.7
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 27 5.7
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 27 5.7
gi|84798622 mannosidase, beta A, lysosomal [Homo sapiens] 27 5.7
gi|126723547 hypothetical protein LOC57523 [Homo sapiens] 27 5.7
gi|238624132 large conductance calcium-activated potassium chann... 27 7.5
gi|238624130 large conductance calcium-activated potassium chann... 27 7.5
gi|62388890 large conductance calcium-activated potassium channe... 27 7.5
gi|26638650 large conductance calcium-activated potassium channe... 27 7.5
gi|195947361 histidine acid phosphatase domain containing 2A iso... 27 7.5
gi|195947359 histidine acid phosphatase domain containing 2A iso... 27 7.5
gi|66932994 histidine acid phosphatase domain containing 2A isof... 27 7.5
gi|66932992 histidine acid phosphatase domain containing 2A isof... 27 7.5
gi|209364523 alsin isoform 2 [Homo sapiens] 27 9.8
gi|40316935 alsin isoform 1 [Homo sapiens] 27 9.8
>gi|197100230 acid phosphatase 2, lysosomal isoform 2 [Homo sapiens]
Length = 160
Score = 336 bits (861), Expect = 6e-93
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MAGKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQEEE 60
MAGKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQEEE
Sbjct: 1 MAGKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQEEE 60
Query: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRVRVASPSLGW 160
LFPPNGMQRFNPNISWQPIPVHTVPITEDRVRVASPSLGW
Sbjct: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRVRVASPSLGW 160
>gi|4557010 acid phosphatase 2, lysosomal isoform 1 precursor [Homo
sapiens]
Length = 423
Score = 316 bits (809), Expect = 6e-87
Identities = 150/151 (99%), Positives = 151/151 (100%)
Query: 1 MAGKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQEEE 60
MAGKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQEEE
Sbjct: 1 MAGKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQEEE 60
Query: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRV 151
LFPPNGMQRFNPNISWQPIPVHTVPITEDR+
Sbjct: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRL 151
>gi|197116348 acid phosphatase, prostate long isoform precursor
[Homo sapiens]
Length = 418
Score = 175 bits (443), Expect = 2e-44
Identities = 77/122 (63%), Positives = 99/122 (81%)
Query: 30 ARSLRFVTLLYRHGDRSPVKTYPKDPYQEEEWPQGFGQLTKEGMLQHWELGQALRQRYHG 89
A+ L+FVTL++RHGDRSP+ T+P DP +E WPQGFGQLT+ GM QH+ELG+ +R+RY
Sbjct: 32 AKELKFVTLVFRHGDRSPIDTFPTDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRYRK 91
Query: 90 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPITED 149
FLN SY ++VY+RSTD DRTLMSA NLA LFPP G+ +NP + WQPIPVHTVP++ED
Sbjct: 92 FLNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLSED 151
Query: 150 RV 151
++
Sbjct: 152 QL 153
>gi|6382064 acid phosphatase, prostate short isoform precursor [Homo
sapiens]
Length = 386
Score = 175 bits (443), Expect = 2e-44
Identities = 77/122 (63%), Positives = 99/122 (81%)
Query: 30 ARSLRFVTLLYRHGDRSPVKTYPKDPYQEEEWPQGFGQLTKEGMLQHWELGQALRQRYHG 89
A+ L+FVTL++RHGDRSP+ T+P DP +E WPQGFGQLT+ GM QH+ELG+ +R+RY
Sbjct: 32 AKELKFVTLVFRHGDRSPIDTFPTDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRYRK 91
Query: 90 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPITED 149
FLN SY ++VY+RSTD DRTLMSA NLA LFPP G+ +NP + WQPIPVHTVP++ED
Sbjct: 92 FLNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLSED 151
Query: 150 RV 151
++
Sbjct: 152 QL 153
>gi|14861860 testicular acid phosphatase precursor [Homo sapiens]
Length = 426
Score = 149 bits (376), Expect = 1e-36
Identities = 82/156 (52%), Positives = 103/156 (66%), Gaps = 10/156 (6%)
Query: 1 MAGKRSGWSRAALLQLLLGVNLVVMPPTRARS--LRFVTLLYRHGDRSPVKTYPKDPYQE 58
MAG A L LLL L+V+PP L FV L++RHGDR+P+ +YP DP++E
Sbjct: 1 MAGLGFWGHPAGPLLLLL---LLVLPPRALPEGPLVFVALVFRHGDRAPLASYPMDPHKE 57
Query: 59 EE---WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAE 115
WP+G GQLT EG+ Q ELG+ LR RY FL+ Y R+EVY+RSTDFDRTL SA+
Sbjct: 58 VASTLWPRGLGQLTTEGVRQQLELGRFLRSRYEAFLSPEYRREEVYIRSTDFDRTLESAQ 117
Query: 116 ANLAGLFPPNGMQRFNPNISWQPIPVHTVPITEDRV 151
ANLAGLFP +P W+PIPVHTVP+ ED++
Sbjct: 118 ANLAGLFPEAAPG--SPEARWRPIPVHTVPVAEDKL 151
>gi|151301213 acid phosphatase 6, lysophosphatidic [Homo sapiens]
Length = 428
Score = 54.7 bits (130), Expect = 3e-08
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 46/134 (34%)
Query: 33 LRFVTLLYRHGDRSPVKTYPKDPYQEEEW-----------------------PQGF---- 65
L+ V +++RHG RSP+K P + ++ EW P+ +
Sbjct: 50 LKMVQVVFRHGARSPLKPLPLE--EQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYD 107
Query: 66 --------------GQLTKEGMLQHWELGQALRQRYHG---FLNTSYHRQEVYVRSTDFD 108
GQLTK GM Q + LG+ LR+ Y FL+ +++ QEV++RST+
Sbjct: 108 SQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIF 167
Query: 109 RTLMSAEANLAGLF 122
R L S LAGLF
Sbjct: 168 RNLESTRCLLAGLF 181
>gi|81295410 acid phosphatase-like 2 [Homo sapiens]
Length = 480
Score = 43.1 bits (100), Expect = 1e-04
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 51 YPKDPYQEEEWPQGFGQLTKEGMLQHWELGQALRQRY---HGFLNTSYHRQEVYVRSTDF 107
YP P E G+LT+ G++QH + GQ LR Y H L + ++Y+ +T
Sbjct: 154 YPNHPLCE------MGELTQTGVVQHLQNGQLLRDIYLKKHKLLPNDWSADQLYLETTGK 207
Query: 108 DRTLMSAEANLAGLFP 123
RTL S A L G P
Sbjct: 208 SRTLQSGLALLYGFLP 223
>gi|22748649 acid phosphatase-like 2 [Homo sapiens]
Length = 480
Score = 43.1 bits (100), Expect = 1e-04
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 51 YPKDPYQEEEWPQGFGQLTKEGMLQHWELGQALRQRY---HGFLNTSYHRQEVYVRSTDF 107
YP P E G+LT+ G++QH + GQ LR Y H L + ++Y+ +T
Sbjct: 154 YPNHPLCE------MGELTQTGVVQHLQNGQLLRDIYLKKHKLLPNDWSADQLYLETTGK 207
Query: 108 DRTLMSAEANLAGLFP 123
RTL S A L G P
Sbjct: 208 SRTLQSGLALLYGFLP 223
>gi|156104886 CC chemokine receptor 10 [Homo sapiens]
Length = 362
Score = 30.0 bits (66), Expect = 0.88
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 72 GMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFP 123
G LQ W LG A + G + S+H +++ DR + A A AG P
Sbjct: 101 GALQGWSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRP 152
>gi|4503057 crystallin, alpha B [Homo sapiens]
Length = 175
Score = 28.9 bits (63), Expect = 2.0
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 84 RQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHT 143
RQ HGF++ +HR+ Y D D +++ + G+ NG ++ +S P T
Sbjct: 107 RQDEHGFISREFHRK--YRIPADVDPLTITSSLSSDGVLTVNGPRK---QVSG---PERT 158
Query: 144 VPITED 149
+PIT +
Sbjct: 159 IPITRE 164
>gi|41281583 Histidine acid phosphatase domain containing 1 [Homo
sapiens]
Length = 1222
Score = 28.1 bits (61), Expect = 3.4
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Query: 66 GQLTKEGMLQHWELGQALRQRYHGFLNT-------------SYHRQEVYVRSTDFDRTLM 112
G+LT G +Q ELG+A R Y G S +R ++ + ++D R M
Sbjct: 513 GELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQM 572
Query: 113 SAEANLAGLFPPNG 126
+A A GL G
Sbjct: 573 TAAAFAKGLLALEG 586
>gi|154124881 kinesin family member 25 isoform 2 [Homo sapiens]
Length = 332
Score = 27.7 bits (60), Expect = 4.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 13 LLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQE 58
L LL G N+ VM + S + T+L RH D PV P DP +
Sbjct: 50 LTSLLDGYNVCVMAYGQTGSGKSYTMLGRHSDDGPV--LPLDPQSD 93
>gi|154124879 kinesin family member 25 isoform 1 [Homo sapiens]
Length = 384
Score = 27.7 bits (60), Expect = 4.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 13 LLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQE 58
L LL G N+ VM + S + T+L RH D PV P DP +
Sbjct: 50 LTSLLDGYNVCVMAYGQTGSGKSYTMLGRHSDDGPV--LPLDPQSD 93
>gi|148612863 transient receptor potential cation channel, subfamily
M, member 7 [Homo sapiens]
Length = 1865
Score = 27.3 bits (59), Expect = 5.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
Query: 108 DRTLMSAEANLAGLFPP----------------NGMQRFNPNISWQPIPVHTVPITEDRV 151
+R + S E L GL P N + R + +I + P+P P+T R+
Sbjct: 1528 NREMPSEEGTLNGLTSPFKPAMDTNYYYSAVERNNLMRLSQSIPFTPVPPRGEPVTVYRL 1587
Query: 152 RVASPSL 158
+SP++
Sbjct: 1588 EESSPNI 1594
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 27.3 bits (59), Expect = 5.7
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 15/93 (16%)
Query: 58 EEEWPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFD--------- 108
E++ P+GFG +T E + QA+ +H + + R +
Sbjct: 149 EKQRPRGFGFITFE---DEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQ 205
Query: 109 ---RTLMSAEANLAGLFPPNGMQRFNPNISWQP 138
R + +A AG PP Q + P W P
Sbjct: 206 WGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVP 238
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 27.3 bits (59), Expect = 5.7
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 15/93 (16%)
Query: 58 EEEWPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFD--------- 108
E++ P+GFG +T E + QA+ +H + + R +
Sbjct: 149 EKQRPRGFGFITFE---DEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQ 205
Query: 109 ---RTLMSAEANLAGLFPPNGMQRFNPNISWQP 138
R + +A AG PP Q + P W P
Sbjct: 206 WGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVP 238
>gi|84798622 mannosidase, beta A, lysosomal [Homo sapiens]
Length = 879
Score = 27.3 bits (59), Expect = 5.7
Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 9/101 (8%)
Query: 58 EEEWPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEAN 117
E WP G G T M +EL G LN +VY R+ + +
Sbjct: 288 ETWWPHGHGNQTGYNMTVLFELD--------GGLNIE-KSAKVYFRTVELIEEPIKGSPG 338
Query: 118 LAGLFPPNGMQRFNPNISWQPIPVHTVPITEDRVRVASPSL 158
L+ F NG F +W P +T + +R+ S+
Sbjct: 339 LSFYFKINGFPIFLKGSNWIPADSFQDRVTSELLRLLLQSV 379
>gi|126723547 hypothetical protein LOC57523 [Homo sapiens]
Length = 1898
Score = 27.3 bits (59), Expect = 5.7
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 3 GKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPY---QEE 59
GKR+ ALLQ LLG N ++ P A RF +L D S Y +E+
Sbjct: 1266 GKRA--LELALLQGLLGENRLLTPA--ASMPRFFQVLPPFSDLSTFVCIHMSGYCFYRED 1321
Query: 60 EWPQGFG 66
EW GFG
Sbjct: 1322 EWCAGFG 1328
>gi|238624132 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform d [Homo sapiens]
Length = 1219
Score = 26.9 bits (58), Expect = 7.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 102 VRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVH 142
++S FD ++ +AN G PP GM R +P+ S PVH
Sbjct: 933 IKSMQFDDSIGVLQANSQGFTPP-GMDRSSPDNS----PVH 968
>gi|238624130 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform c [Homo sapiens]
Length = 1236
Score = 26.9 bits (58), Expect = 7.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 102 VRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVH 142
++S FD ++ +AN G PP GM R +P+ S PVH
Sbjct: 950 IKSMQFDDSIGVLQANSQGFTPP-GMDRSSPDNS----PVH 985
>gi|62388890 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform a [Homo sapiens]
Length = 1182
Score = 26.9 bits (58), Expect = 7.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 102 VRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVH 142
++S FD ++ +AN G PP GM R +P+ S PVH
Sbjct: 896 IKSMQFDDSIGVLQANSQGFTPP-GMDRSSPDNS----PVH 931
>gi|26638650 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform b [Homo sapiens]
Length = 1178
Score = 26.9 bits (58), Expect = 7.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 102 VRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVH 142
++S FD ++ +AN G PP GM R +P+ S PVH
Sbjct: 892 IKSMQFDDSIGVLQANSQGFTPP-GMDRSSPDNS----PVH 927
>gi|195947361 histidine acid phosphatase domain containing 2A
isoform 2 [Homo sapiens]
Length = 1408
Score = 26.9 bits (58), Expect = 7.5
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 66 GQLTKEGMLQHWELGQALRQRYHGFLNT-------------SYHRQEVYVRSTDFDRTLM 112
G+LT G +Q ELG+A R Y G S R ++ + ++D R M
Sbjct: 525 GELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQM 584
Query: 113 SAEANLAGLFPPNG 126
+A A GL G
Sbjct: 585 TAAAFAKGLLALEG 598
>gi|195947359 histidine acid phosphatase domain containing 2A
isoform 5 [Homo sapiens]
Length = 1433
Score = 26.9 bits (58), Expect = 7.5
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 66 GQLTKEGMLQHWELGQALRQRYHGFLNT-------------SYHRQEVYVRSTDFDRTLM 112
G+LT G +Q ELG+A R Y G S R ++ + ++D R M
Sbjct: 525 GELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQM 584
Query: 113 SAEANLAGLFPPNG 126
+A A GL G
Sbjct: 585 TAAAFAKGLLALEG 598
>gi|66932994 histidine acid phosphatase domain containing 2A isoform
4 [Homo sapiens]
Length = 1194
Score = 26.9 bits (58), Expect = 7.5
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 66 GQLTKEGMLQHWELGQALRQRYHGFLNT-------------SYHRQEVYVRSTDFDRTLM 112
G+LT G +Q ELG+A R Y G S R ++ + ++D R M
Sbjct: 525 GELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQM 584
Query: 113 SAEANLAGLFPPNG 126
+A A GL G
Sbjct: 585 TAAAFAKGLLALEG 598
>gi|66932992 histidine acid phosphatase domain containing 2A isoform
2 [Homo sapiens]
Length = 1408
Score = 26.9 bits (58), Expect = 7.5
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 66 GQLTKEGMLQHWELGQALRQRYHGFLNT-------------SYHRQEVYVRSTDFDRTLM 112
G+LT G +Q ELG+A R Y G S R ++ + ++D R M
Sbjct: 525 GELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQM 584
Query: 113 SAEANLAGLFPPNG 126
+A A GL G
Sbjct: 585 TAAAFAKGLLALEG 598
>gi|209364523 alsin isoform 2 [Homo sapiens]
Length = 396
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 7 GWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQE 58
GW +LQ LGV V+ F TL +R G PV+ P P E
Sbjct: 37 GWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSG---PVEICPSSPILE 85
>gi|40316935 alsin isoform 1 [Homo sapiens]
Length = 1657
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 7 GWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQE 58
GW +LQ LGV V+ F TL +R G PV+ P P E
Sbjct: 37 GWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSG---PVEICPSSPILE 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,739,023
Number of Sequences: 37866
Number of extensions: 295622
Number of successful extensions: 585
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 564
Number of HSP's gapped (non-prelim): 36
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.