Search of human proteins with 196123588

Search of human proteins with 196123588

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens
neanderthalensis]
         (459 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens neandert...   906   0.0  
gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]              906   0.0  
gi|196123589 NADH dehydrogenase subunit 5 [Homo sapiens neandert...    73   6e-13
gi|251831117 NADH dehydrogenase subunit 5 [Homo sapiens]               72   1e-12
gi|196123580 NADH dehydrogenase subunit 2 [Homo sapiens neandert...    58   2e-08
gi|251831108 NADH dehydrogenase subunit 2 [Homo sapiens]               58   2e-08
gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo...    37   0.037
gi|52317213 olfactory receptor, family 2, subfamily T, member 12...    35   0.19 
gi|34577052 coagulation factor II (thrombin) receptor-like 1 pre...    33   0.71 
gi|10092643 Yip1 domain family, member 1 [Homo sapiens]                32   1.2  
gi|31317272 WD repeat and FYVE domain containing 3 isoform 1 [Ho...    32   1.6  
gi|148839335 dpy-19-like 1 [Homo sapiens]                              32   1.6  
gi|50053006 olfactory receptor, family 2, subfamily D, member 2 ...    32   1.6  
gi|52218872 olfactory receptor, family 2, subfamily AG, member 1...    31   2.1  
gi|4505557 purinergic receptor P2Y1 [Homo sapiens]                     31   2.7  
gi|239756685 PREDICTED: TLC domain containing 2 [Homo sapiens]         30   3.5  
gi|239751182 PREDICTED: hypothetical protein [Homo sapiens]            30   3.5  
gi|239745670 PREDICTED: TLC domain containing 2 [Homo sapiens]         30   3.5  
gi|4502607 cholecystokinin A receptor [Homo sapiens]                   30   4.6  
gi|4502649 CD1D antigen precursor [Homo sapiens]                       30   4.6  
gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]            30   6.0  
gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]            30   6.0  
gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]            30   6.0  
gi|57164951 non imprinted in Prader-Willi/Angelman syndrome 2 is...    30   6.0  
gi|57013272 non imprinted in Prader-Willi/Angelman syndrome 2 is...    30   6.0  
gi|57164953 non imprinted in Prader-Willi/Angelman syndrome 2 is...    30   6.0  
gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2 is...    30   6.0  
gi|53850670 olfactory receptor, family 2, subfamily T, member 8 ...    29   7.8  

>gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens
           neanderthalensis]
          Length = 459

 Score =  906 bits (2342), Expect = 0.0
 Identities = 459/459 (100%), Positives = 459/459 (100%)

Query: 1   MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDP 60
           MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDP
Sbjct: 1   MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDP 60

Query: 61  LTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYI 120
           LTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYI
Sbjct: 61  LTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYI 120

Query: 121 FFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLT 180
           FFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLT
Sbjct: 121 FFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLT 180

Query: 181 LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
           LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG
Sbjct: 181 LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240

Query: 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTA 300
           YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTA
Sbjct: 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTA 300

Query: 301 ILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWL 360
           ILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWL
Sbjct: 301 ILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWL 360

Query: 361 LASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLT 420
           LASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLT
Sbjct: 361 LASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLT 420

Query: 421 HHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS 459
           HHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS
Sbjct: 421 HHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS 459


>gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]
          Length = 459

 Score =  906 bits (2342), Expect = 0.0
 Identities = 459/459 (100%), Positives = 459/459 (100%)

Query: 1   MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDP 60
           MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDP
Sbjct: 1   MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDP 60

Query: 61  LTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYI 120
           LTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYI
Sbjct: 61  LTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYI 120

Query: 121 FFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLT 180
           FFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLT
Sbjct: 121 FFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLT 180

Query: 181 LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
           LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG
Sbjct: 181 LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240

Query: 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTA 300
           YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTA
Sbjct: 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTA 300

Query: 301 ILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWL 360
           ILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWL
Sbjct: 301 ILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWL 360

Query: 361 LASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLT 420
           LASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLT
Sbjct: 361 LASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLT 420

Query: 421 HHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS 459
           HHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS
Sbjct: 421 HHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS 459


>gi|196123589 NADH dehydrogenase subunit 5 [Homo sapiens
           neanderthalensis]
          Length = 603

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 37/367 (10%)

Query: 64  PLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFE 123
           P+ +  TW +   +  S  +++S+P   +  +   L+   I++++  TA  L   +I +E
Sbjct: 91  PVALFVTWSI---MEFSLWYMNSDPNINQ--FFKYLLIFLITMLILVTANNLFQLFIGWE 145

Query: 124 TTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIAL---IYTHNTLGSLNILLLT 180
              I +  +I+ W  + +   A    + Y  +G +  ++AL   I   N+     + LL 
Sbjct: 146 GVGIMSFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALL- 204

Query: 181 LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
                  N+  +    L   +A   K    GLH WLP A +E P   S +L +  + + G
Sbjct: 205 -------NANPSLTPLLGLLLAAAGKSAQLGLHPWLPSA-MEGPTPVSALLHSSTMVVAG 256

Query: 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMT--SSIC-LRQTDLKSLIAYSSISHMALV 297
              + L +  +PL ++      +    G I T  +++C L Q D+K ++A+S+ S + L+
Sbjct: 257 ---VFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLGLM 313

Query: 298 VTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQ-GLQTLLPLMA 356
           V  I I  P     A + +  H    ++LF  + S     ++   I    GL   +PL +
Sbjct: 314 VVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTS 370

Query: 357 FWWLLASLANLALPPTINLLGELSVLVT-----TFSWS-NITLLLTGLNMLVTALYSLYM 410
               + SLA   +P       +  ++ T     T +W+ +ITL+ T L    T+ YS  M
Sbjct: 371 TSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSL----TSAYSTRM 426

Query: 411 FTTTQWG 417
              T  G
Sbjct: 427 ILLTLTG 433


>gi|251831117 NADH dehydrogenase subunit 5 [Homo sapiens]
          Length = 603

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 37/367 (10%)

Query: 64  PLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFE 123
           P+ +  TW +   +  S  +++S+P   +  +   L+   I++++  TA  L   +I +E
Sbjct: 91  PVALFVTWSI---MEFSLWYMNSDPNINQ--FFKYLLIFLITMLILVTANNLFQLFIGWE 145

Query: 124 TTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIAL---IYTHNTLGSLNILLLT 180
              I +  +I+ W  + +   A    + Y  +G +  ++AL   I   N+     + LL 
Sbjct: 146 GVGIMSFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALL- 204

Query: 181 LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
                  N+  +    L   +A   K    GLH WLP A +E P   S +L +  + + G
Sbjct: 205 -------NANPSLTPLLGLLLAAAGKSAQLGLHPWLPSA-MEGPTPVSALLHSSTMVVAG 256

Query: 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMT--SSIC-LRQTDLKSLIAYSSISHMALV 297
              + L +  +PL ++      +    G I T  +++C L Q D+K ++A+S+ S + L+
Sbjct: 257 ---IFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLGLM 313

Query: 298 VTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQ-GLQTLLPLMA 356
           +  I I  P     A + +  H    ++LF  + S     ++   I    GL   +PL +
Sbjct: 314 MVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTS 370

Query: 357 FWWLLASLANLALPPTINLLGELSVLVT-----TFSWS-NITLLLTGLNMLVTALYSLYM 410
               + SLA   +P       +  ++ T     T +W+ +ITL+ T L    T+ YS  M
Sbjct: 371 TSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSL----TSAYSTRM 426

Query: 411 FTTTQWG 417
              T  G
Sbjct: 427 ILLTLTG 433


>gi|196123580 NADH dehydrogenase subunit 2 [Homo sapiens
           neanderthalensis]
          Length = 347

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 77/365 (21%), Positives = 154/365 (42%), Gaps = 38/365 (10%)

Query: 88  PLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGT 147
           PL++  +Y ++        ++T  ++     ++  E  ++  + ++T+  N P    A  
Sbjct: 3   PLAQPVIYSTIFAGT----LITALSSHWFFTWVGLEMNMLAFIPVLTKKMN-PRSTEAAI 57

Query: 148 YFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKM 207
            +       S+ LL+A+++ +            L+ Q    +  N    L   MA  +K+
Sbjct: 58  KYFLTQATASMILLMAILFNN-----------MLSGQWTMTNTTNQYSSLMIMMAMAMKL 106

Query: 208 PLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMM-RLTLILNPLTKHMAYPFLVLSL 266
            +   H W+P+     P+   ++L     KL    +M +++  LN          L LS+
Sbjct: 107 GMAPFHFWVPEVTQGTPLTSGLLLLT-WQKLAPISIMYQISPSLNVSL------LLTLSI 159

Query: 267 WGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLL 326
             ++  S   L QT L+ ++AYSSI+HM  ++  +    P++    ++ +  + + ++  
Sbjct: 160 LSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVL----PYNPNMTILNLTIYIILTTTA 215

Query: 327 FCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTF 386
           F L N N   T   +      L  L PL+     L SL    LPP    L + ++ +  F
Sbjct: 216 FLLLNLNSSTTTLLLSRTWNKLTWLTPLIPS--TLLSLG--GLPPLTGFLPKWAI-IEEF 270

Query: 387 SWSNITLLLTGLNMLVTALYSLYMFTTTQWG---SLTHHINNMKPSFTRENTLMFMHLSP 443
           + +N  ++ T   M    L +LY +    +    +L    NN+K  +  E+T     L  
Sbjct: 271 TKNNSLIIPT--IMATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPT 328

Query: 444 ILLLS 448
           ++ L+
Sbjct: 329 LITLT 333


>gi|251831108 NADH dehydrogenase subunit 2 [Homo sapiens]
          Length = 347

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 77/365 (21%), Positives = 154/365 (42%), Gaps = 38/365 (10%)

Query: 88  PLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGT 147
           PL++  +Y ++        ++T  ++     ++  E  ++  + ++T+  N P    A  
Sbjct: 3   PLAQPVIYSTIFAGT----LITALSSHWFFTWVGLEMNMLAFIPVLTKKMN-PRSTEAAI 57

Query: 148 YFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKM 207
            +       S+ LL+A+++ +            L+ Q    +  N    L   MA  +K+
Sbjct: 58  KYFLTQATASMILLMAILFNN-----------MLSGQWTMTNTTNQYSSLMIMMAMAMKL 106

Query: 208 PLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMM-RLTLILNPLTKHMAYPFLVLSL 266
            +   H W+P+     P+   ++L     KL    +M +++  LN          L LS+
Sbjct: 107 GMAPFHFWVPEVTQGTPLTSGLLLLT-WQKLAPISIMYQISPSLNVSL------LLTLSI 159

Query: 267 WGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLL 326
             ++  S   L QT L+ ++AYSSI+HM  ++  +    P++    ++ +  + + ++  
Sbjct: 160 LSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVL----PYNPNMTILNLTIYIILTTTA 215

Query: 327 FCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTF 386
           F L N N   T   +      L  L PL+     L SL    LPP    L + ++ +  F
Sbjct: 216 FLLLNLNSSTTTLLLSRTWNKLTWLTPLIPS--TLLSLG--GLPPLTGFLPKWAI-IEEF 270

Query: 387 SWSNITLLLTGLNMLVTALYSLYMFTTTQWG---SLTHHINNMKPSFTRENTLMFMHLSP 443
           + +N  ++ T   M    L +LY +    +    +L    NN+K  +  E+T     L  
Sbjct: 271 TKNNSLIIPT--IMATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPT 328

Query: 444 ILLLS 448
           ++ L+
Sbjct: 329 LIALT 333


>gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo
           sapiens]
          Length = 606

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 33/163 (20%)

Query: 23  IWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLL---PLTIMA 79
           +W    T SL    +P      + N++   + +  + P TT LL+LT WLL   PLT++ 
Sbjct: 373 VWNIILTTSLFS--VPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIG 430

Query: 80  S---------------QRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFET 124
                            ++++ E +  +  Y S +I + +   + F+A  + ++YIF   
Sbjct: 431 GIFGKNNASPFDAPCRTKNIARE-IPPQPWYKSTVIHMTVGGFLPFSAISVELYYIF--- 486

Query: 125 TLIPTLAIITRWGNQPERLNAGTYFLFYTLVG-SLPLLIALIY 166
                    T WG +   L    +F+F  L+     + IAL Y
Sbjct: 487 --------ATVWGREQYTLYGILFFVFAILLSVGACISIALTY 521


>gi|52317213 olfactory receptor, family 2, subfamily T, member 12
           [Homo sapiens]
          Length = 320

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 24/202 (11%)

Query: 108 MTFTATELIMFYIFFETTLIPTLAIITRWGNQP-ERLNAGTYFLFYTLVGSLP--LLIAL 164
           M F  ++L +  +   +T +P +A     GN+   R   G    F   +G     LL A+
Sbjct: 57  MYFLLSQLSLMDMMLVSTTVPKMAADYLTGNKAISRAGCGVQIFFLPTLGGGECFLLAAM 116

Query: 165 IYTHNTLGSLNILLLTLTAQELS-----NSW----ANNLMWLAYTMAFMVKMPLYGLHLW 215
            Y         +   TL + +L      +SW    A+ L+    T++F    P  G H  
Sbjct: 117 AYDRYAAVCHPLRYPTLMSWQLCLRMTMSSWLLGAADGLLQAVATLSF----PYCGAHE- 171

Query: 216 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSI 275
           +     EAP+   +  A   +      +  + ++L P +       L+LS +G+I+ + +
Sbjct: 172 IDHFFCEAPVLVRLACADTSVFENAMYICCVLMLLVPFS-------LILSSYGLILAAVL 224

Query: 276 CLRQTDLKSLIAYSSISHMALV 297
            +R T+ +     +  SH+A+V
Sbjct: 225 LMRSTEARKKAFATCSSHVAVV 246


>gi|34577052 coagulation factor II (thrombin) receptor-like 1
           precursor [Homo sapiens]
          Length = 397

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 72  LLPLTIMASQRH-LSSEPL--SRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIP 128
           +L +T ++ QR+ +   P+  SRKK  +++ ISL I L++      L   Y+  +T  IP
Sbjct: 163 ILFMTCLSVQRYWVIVNPMGHSRKKANIAIGISLAIWLLILLVTIPL---YVVKQTIFIP 219

Query: 129 TLAIITRWGNQPERLNAGTYFLFY 152
            L I T     PE+L  G  F ++
Sbjct: 220 ALNITTCHDVLPEQLLVGDMFNYF 243


>gi|10092643 Yip1 domain family, member 1 [Homo sapiens]
          Length = 306

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 14/78 (17%)

Query: 258 AYPFLV-LSLWGMIMTSSICLRQTDLKSLIAYSSISHMAL--------VVTAILIQTPWS 308
           AY +LV L+LWG +M      R + + ++++YS +  + +        + TAIL   P  
Sbjct: 170 AYAWLVPLALWGFLMW-----RNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQK 224

Query: 309 FTGAVILMIAHGLTSSLL 326
               +++MIA G++ SLL
Sbjct: 225 AVRWILVMIALGISGSLL 242


>gi|31317272 WD repeat and FYVE domain containing 3 isoform 1 [Homo
            sapiens]
          Length = 3526

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 20/121 (16%)

Query: 89   LSRKKLYLSMLISLQISLIMTF------TATELIMFYIFFETTLIPTLAIITRWG----N 138
            L+ + + LS      IS +++F      ++ +L+ F  F  +TL PT A+  ++     N
Sbjct: 1551 LTLRDMSLSQPTIAAISNVLSFLLQGFPSSNDLLRFGQFISSTL-PTFAVCEKFVVMEIN 1609

Query: 139  QPERLNAGTYFLFYTLVGS---------LPLLIALIYTHNTLGSLNILLLTLTAQELSNS 189
              E+L+ GT   F  LV +         L +L+ LIYT     S+N+       + L   
Sbjct: 1610 NEEKLDTGTEEEFGGLVSANLILLRNRLLDILLKLIYTSKEKTSINLQACEELVKTLGFD 1669

Query: 190  W 190
            W
Sbjct: 1670 W 1670


>gi|148839335 dpy-19-like 1 [Homo sapiens]
          Length = 675

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 192 NNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILN 251
           ++L  L   MAF  +M LY  +    K  VEAP   + V   +  KL  Y      L++N
Sbjct: 49  SHLSTLEREMAFRTEMGLYYSYF---KTIVEAPSFLNGVWMIMNDKLTEY-----PLVIN 100

Query: 252 PLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTG 311
            L +   YP ++L+ W  I T  + L     K     +    ++ + +   +  P  F  
Sbjct: 101 TLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPACFYV 160

Query: 312 AVILMIAHGLTSSLLF 327
           AVI  I +GL  +L F
Sbjct: 161 AVI-FILNGLMMALFF 175



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 231 LAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSS 290
           L  VL     +G     +   PL +  +YPFLVL    M++ + I LR T L     Y  
Sbjct: 189 LVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQ---MLLVTHI-LRATKL-----YRG 239

Query: 291 ISHMALVVTAILIQTPWSFTGAVIL 315
            S +AL ++ +    PW F   V+L
Sbjct: 240 -SLIALCISNVFFMLPWQFAQFVLL 263


>gi|50053006 olfactory receptor, family 2, subfamily D, member 2
           [Homo sapiens]
          Length = 308

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 29/218 (13%)

Query: 98  MLISL-----QISLIMTFTATELIMFYIFFETTLIPTLAI--ITRWGNQPERLNAGTYFL 150
           +LISL     Q+   M F    L +  + F T ++P   +  ++R       L A    L
Sbjct: 44  LLISLVHVDSQLHTPMYFFLCNLSLADLCFSTNIVPQALVHLLSRKKVIAFTLCAAR-LL 102

Query: 151 FYTLVGSLPLLIALIYTH-------NTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAF 203
           F+ + G     +  + ++       N L   NI+   +  Q  + SW + ++       F
Sbjct: 103 FFLIFGCTQCALLAVMSYDRYVAICNPLRYPNIMTWKVCVQLATGSWTSGILVSVVDTTF 162

Query: 204 MVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYG--MMRLTLILNPLTKHMAYPF 261
           ++++P  G +     AH        ++LA+           +M + ++L P+       F
Sbjct: 163 ILRLPYRGSN---SIAHFFCEAPALLILASTDTHASEMAIFLMGVVILLIPV-------F 212

Query: 262 LVLSLWGMIMTSSICLRQTDLKSLIAYSSI-SHMALVV 298
           L+L  +G I+ + + ++ T + SL A+S+  SH+ +V+
Sbjct: 213 LILVSYGRIIVTVVKMKST-VGSLKAFSTCGSHLMVVI 249


>gi|52218872 olfactory receptor, family 2, subfamily AG, member 1
           [Homo sapiens]
          Length = 316

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 52/234 (22%), Positives = 91/234 (38%), Gaps = 37/234 (15%)

Query: 155 VGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGL-- 212
           +GS  +L+ ++   N  GS  +L  T+T   L    +N L+ LA TM   + MP+Y L  
Sbjct: 8   LGSGFILVGIL---NDSGSPELLCATITILYLLALISNGLLLLAITMEARLHMPMYLLLG 64

Query: 213 ----------HLWLPKAHVE-------APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTK 255
                      +  PKA  +           G  +   + L +GG   + L  +      
Sbjct: 65  QLSLMDLLFTSVVTPKALADFLRRENTISFGGCALQMFLALTMGGAEDLLLAFMAYDRYV 124

Query: 256 HMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVIL 315
            + +P   ++L    M+S  C        ++A    S  AL+ T   +  P+     +  
Sbjct: 125 AICHPLTYMTL----MSSRACWLMVATSWILA----SLSALIYTVYTMHYPFCRAQEIRH 176

Query: 316 MIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLAL 369
           ++        + C   S YE     +M+   G+  L+P +A   +LAS   + L
Sbjct: 177 LLCEIPHLLKVACADTSRYE-----LMVYVMGVTFLIPSLAA--ILASYTQILL 223


>gi|4505557 purinergic receptor P2Y1 [Homo sapiens]
          Length = 373

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 26/123 (21%)

Query: 17  LSKKHMIWINTTTHSLII-SIIPLLFFNQIN---NNLFSCSPTFSSDPLTTPLL--MLTT 70
           L KK+ I I+     +++ +I P+LF++      N   +C  T S + L +  +  M TT
Sbjct: 163 LKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTT 222

Query: 71  ---WLLPLTIMAS----------QRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIM 117
              + +PL ++             + L + PL RK +YL       + +++T  A   I 
Sbjct: 223 VAMFCVPLVLILGCYGLIVRALIYKDLDNSPLRRKSIYL-------VIIVLTVFAVSYIP 275

Query: 118 FYI 120
           F++
Sbjct: 276 FHV 278


>gi|239756685 PREDICTED: TLC domain containing 2 [Homo sapiens]
          Length = 264

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 16/77 (20%)

Query: 176 ILLLTLTAQELS---NSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLA 232
           +LLL+  A  L+    SWA+       T+A    +PL  + LWL + H + P+A      
Sbjct: 150 LLLLSRQAPSLAFSVTSWAS-----LATLALFRLVPLGWMSLWLFRQHHQVPLA------ 198

Query: 233 AVLLKLGGYGMMRLTLI 249
             L+ LGG G++ + ++
Sbjct: 199 --LVTLGGIGLVTVGIM 213


>gi|239751182 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 264

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 16/77 (20%)

Query: 176 ILLLTLTAQELS---NSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLA 232
           +LLL+  A  L+    SWA+       T+A    +PL  + LWL + H + P+A      
Sbjct: 150 LLLLSRQAPSLAFSVTSWAS-----LATLALFRLVPLGWMSLWLFRQHHQVPLA------ 198

Query: 233 AVLLKLGGYGMMRLTLI 249
             L+ LGG G++ + ++
Sbjct: 199 --LVTLGGIGLVTVGIM 213


>gi|239745670 PREDICTED: TLC domain containing 2 [Homo sapiens]
          Length = 264

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 16/77 (20%)

Query: 176 ILLLTLTAQELS---NSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLA 232
           +LLL+  A  L+    SWA+       T+A    +PL  + LWL + H + P+A      
Sbjct: 150 LLLLSRQAPSLAFSVTSWAS-----LATLALFRLVPLGWMSLWLFRQHHQVPLA------ 198

Query: 233 AVLLKLGGYGMMRLTLI 249
             L+ LGG G++ + ++
Sbjct: 199 --LVTLGGIGLVTVGIM 213


>gi|4502607 cholecystokinin A receptor [Homo sapiens]
          Length = 428

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 145 AGTYFLFYTLVGSLPLLIALI-YTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAF 203
           A T+ L +T++   P+   L+ +T N   + N+    L    +  SW   L+ + + +  
Sbjct: 163 AATWCLSFTIMTPYPIYSNLVPFTKNNNQTANMCRFLLPNDVMQQSWHTFLLLILFLIPG 222

Query: 204 MVKMPLYGL 212
           +V M  YGL
Sbjct: 223 IVMMVAYGL 231


>gi|4502649 CD1D antigen precursor [Homo sapiens]
          Length = 335

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 13/87 (14%)

Query: 349 QTLLPLMAFWWLLASLANLALPPTINL--LGELSVLVTTFSWSNITLLLTGLNMLVTALY 406
           Q L PL      ++S AN +   T  L  LGEL     T SWSN +  +  L       +
Sbjct: 23  QRLFPLRCLQ--ISSFANSSWTRTDGLAWLGELQ----THSWSNDSDTVRSLKP-----W 71

Query: 407 SLYMFTTTQWGSLTHHINNMKPSFTRE 433
           S   F+  QW +L H     + SFTR+
Sbjct: 72  SQGTFSDQQWETLQHIFRVYRSSFTRD 98


>gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 430

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 8/46 (17%)

Query: 359 WLLASLANLALPPTINLL--GELSVLVTTFSWSNITLLLTGLNMLV 402
           WL +S  +LALPP + LL  G  S+L T   W       TG ++LV
Sbjct: 27  WLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWD------TGRSLLV 66


>gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 430

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 8/46 (17%)

Query: 359 WLLASLANLALPPTINLL--GELSVLVTTFSWSNITLLLTGLNMLV 402
           WL +S  +LALPP + LL  G  S+L T   W       TG ++LV
Sbjct: 27  WLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWD------TGRSLLV 66


>gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 430

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 8/46 (17%)

Query: 359 WLLASLANLALPPTINLL--GELSVLVTTFSWSNITLLLTGLNMLV 402
           WL +S  +LALPP + LL  G  S+L T   W       TG ++LV
Sbjct: 27  WLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWD------TGRSLLV 66


>gi|57164951 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform b [Homo sapiens]
          Length = 341

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 94  LYLSMLISLQISLI---MTFTATELI--MFYIFFETTLIPTLAIITR-WGNQPERLNAGT 147
           L L + +S QI+ +   +    T ++  ++Y+FF T+++   AI+ + W + P     GT
Sbjct: 204 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGT 263

Query: 148 YFLFYTLVGSLPLLIALIYTHNTLGSLNI 176
              F+T++  + LL A      +L SL +
Sbjct: 264 LSGFFTIIVGIFLLHAFKDVSFSLASLPV 292


>gi|57013272 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 94  LYLSMLISLQISLI---MTFTATELI--MFYIFFETTLIPTLAIITR-WGNQPERLNAGT 147
           L L + +S QI+ +   +    T ++  ++Y+FF T+++   AI+ + W + P     GT
Sbjct: 223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGT 282

Query: 148 YFLFYTLVGSLPLLIALIYTHNTLGSLNI 176
              F+T++  + LL A      +L SL +
Sbjct: 283 LSGFFTIIVGIFLLHAFKDVSFSLASLPV 311


>gi|57164953 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 94  LYLSMLISLQISLI---MTFTATELI--MFYIFFETTLIPTLAIITR-WGNQPERLNAGT 147
           L L + +S QI+ +   +    T ++  ++Y+FF T+++   AI+ + W + P     GT
Sbjct: 223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGT 282

Query: 148 YFLFYTLVGSLPLLIALIYTHNTLGSLNI 176
              F+T++  + LL A      +L SL +
Sbjct: 283 LSGFFTIIVGIFLLHAFKDVSFSLASLPV 311


>gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 94  LYLSMLISLQISLI---MTFTATELI--MFYIFFETTLIPTLAIITR-WGNQPERLNAGT 147
           L L + +S QI+ +   +    T ++  ++Y+FF T+++   AI+ + W + P     GT
Sbjct: 223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGT 282

Query: 148 YFLFYTLVGSLPLLIALIYTHNTLGSLNI 176
              F+T++  + LL A      +L SL +
Sbjct: 283 LSGFFTIIVGIFLLHAFKDVSFSLASLPV 311


>gi|53850670 olfactory receptor, family 2, subfamily T, member 8
           [Homo sapiens]
          Length = 312

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 24/202 (11%)

Query: 108 MTFTATELIMFYIFFETTLIPTLAIITRWGNQP-ERLNAGTYFLFYTLVGSLP--LLIAL 164
           M F  ++L +  +   +T +P +A     G++   R   G    F   +G     LL A+
Sbjct: 57  MYFLLSQLSLMDVMLVSTTVPKMAADYLTGSKAISRAGCGAQIFFLPTLGGGECFLLAAM 116

Query: 165 IYTHNTLGSLNILLLTLTAQELS-----NSW----ANNLMWLAYTMAFMVKMPLYGLHLW 215
            Y         +   TL + +L      + W    A+ L+    T++F    P  G H  
Sbjct: 117 AYDRYAAVCHPLRYPTLMSWQLCLRMNLSCWLLGAADGLLQAVATLSF----PYCGAHE- 171

Query: 216 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSI 275
           +     E P+   +  A   +      +  + ++L P +       L+LS +G+I+ + +
Sbjct: 172 IDHFFCETPVLVRLACADTSVFENAMYICCVLMLLVPFS-------LILSSYGLILAAVL 224

Query: 276 CLRQTDLKSLIAYSSISHMALV 297
            +R T+ +     +  SH+A+V
Sbjct: 225 HMRSTEARKKAFATCSSHVAVV 246


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,898,119
Number of Sequences: 37866
Number of extensions: 563779
Number of successful extensions: 1754
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1740
Number of HSP's gapped (non-prelim): 37
length of query: 459
length of database: 18,247,518
effective HSP length: 106
effective length of query: 353
effective length of database: 14,233,722
effective search space: 5024503866
effective search space used: 5024503866
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.