Guide to the Human Genome
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Name: OR2T12 Sequence: fasta or formatted (320aa) NCBI GI: 52317213
Description:

olfactory receptor, family 2, subfamily T, member 12

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         31           2
 C cysteine            3.4         11           2
 D aspartate           2.8          9           1
 E glutamate           2.8          9           1
 F phenylalanine       5.6         18           2
 G glycine             4.7         15           3
 H histidine           4.1         13           1
 I isoleucine          3.4         11           1
 K lysine              2.8          9           2
 L leucine            15.3         49           2
 M methionine          5.9         19           2
 N asparagine          3.1         10           1
 P proline             3.8         12           1
 Q glutamine           2.2          7           2
 R arginine            5.3         17           1
 S serine              7.2         23           2
 T threonine           6.2         20           2
 V valine              6.6         21           2
 W tryptophan          1.2          4           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily T, member 12... 
OR2T33                0.958   olfactory receptor, family 2, subfamily T, member 33...
OR2T8                 0.868   olfactory receptor, family 2, subfamily T, member 8 ...
OR2M3                 0.549   olfactory receptor, family 2, subfamily M, member 3 ...
OR2M5                 0.544   olfactory receptor, family 2, subfamily M, member 5 ...
OR2M2                 0.543   olfactory receptor, family 2, subfamily M, member 2 ...
OR2M7                 0.541   olfactory receptor, family 2, subfamily M, member 7 ...
OR2M4                 0.522   olfactory receptor, family 2, subfamily M, member 4 ...
OR2V2                 0.518   olfactory receptor, family 2, subfamily V, member 2 ...
OR2T1                 0.512   olfactory receptor, family 2, subfamily T, member 1 ...
OR2T27                0.507   olfactory receptor, family 2, subfamily T, member 27...
OR2T2                 0.498   olfactory receptor, family 2, subfamily T, member 2 ...
OR2T5                 0.498   olfactory receptor, family 2, subfamily T, member 5 ...
OR2T29                0.498   olfactory receptor, family 2, subfamily T, member 29...
OR2T35                0.498   olfactory receptor, family 2, subfamily T, member 35...
OR2T4                 0.494   olfactory receptor, family 2, subfamily T, member 4 ...
OR2T11                0.493   olfactory receptor, family 2, subfamily T, member 11...
OR2T6                 0.483   olfactory receptor, family 2, subfamily T, member 6 ...
OR2T3                 0.470   olfactory receptor, family 2, subfamily T, member 3 ...
OR2T10                0.469   olfactory receptor, family 2, subfamily T, member 10...
OR2T34                0.462   olfactory receptor, family 2, subfamily T, member 34...
OR2Z1                 0.462   olfactory receptor, family 2, subfamily Z, member 1 ...
OR2L3                 0.462   olfactory receptor, family 2, subfamily L, member 3 ...
OR2L8                 0.451   olfactory receptor, family 2, subfamily L, member 8 ...
OR2L2                 0.437   olfactory receptor, family 2, subfamily L, member 2 ...
OR2L13                0.433   olfactory receptor, family 2, subfamily L, member 13...
OR2AE1                0.433   olfactory receptor, family 2, subfamily AE, member 1...
OR2AG2                0.432   olfactory receptor, family 2, subfamily AG, member 2...
OR2AG1                0.427   olfactory receptor, family 2, subfamily AG, member 1...
OR2AK2                0.414   olfactory receptor, family 2, subfamily AK, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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