Search of human proteins with 19549331

Search of human proteins with 19549331

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19549331 cytoglobin [Homo sapiens]
         (190 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19549331 cytoglobin [Homo sapiens]                                 383   e-107
gi|4885397 hemoglobin, zeta [Homo sapiens]                             83   1e-16
gi|44955888 myoglobin [Homo sapiens]                                   79   2e-15
gi|44955885 myoglobin [Homo sapiens]                                   79   2e-15
gi|4885477 myoglobin [Homo sapiens]                                    79   2e-15
gi|4885393 epsilon globin [Homo sapiens]                               76   2e-14
gi|28302131 A-gamma globin [Homo sapiens]                              74   1e-13
gi|6715607 G-gamma globin [Homo sapiens]                               74   1e-13
gi|4504349 beta globin [Homo sapiens]                                  71   5e-13
gi|4504347 alpha 1 globin [Homo sapiens]                               70   8e-13
gi|4504345 alpha 2 globin [Homo sapiens]                               70   8e-13
gi|4504351 delta globin [Homo sapiens]                                 69   2e-12
gi|4885395 theta 1 globin [Homo sapiens]                               67   7e-12
gi|51510893 hemoglobin mu chain [Homo sapiens]                         60   1e-09
gi|10864065 neuroglobin [Homo sapiens]                                 44   8e-05
gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sap...    30   0.96 
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    29   2.1  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    29   2.1  
gi|195972881 transmembrane protein 194A isoform a [Homo sapiens]       28   3.6  
gi|195972879 transmembrane protein 194A isoform b [Homo sapiens]       28   3.6  
gi|155030220 PDS5, regulator of cohesion maintenance, homolog A ...    28   3.6  
gi|155030218 PDS5, regulator of cohesion maintenance, homolog A ...    28   3.6  
gi|155030216 PDS5, regulator of cohesion maintenance, homolog A ...    28   3.6  
gi|187960079 MAD2 homolog [Homo sapiens]                               28   3.6  
gi|187960073 MAD2 homolog [Homo sapiens]                               28   3.6  
gi|24308277 SPARC related modular calcium binding 2 [Homo sapiens]     28   4.8  
gi|21359945 chromosome condensation protein G [Homo sapiens]           27   8.1  
gi|122891870 melanoma inhibitory activity family, member 3 [Homo...    27   8.1  

>gi|19549331 cytoglobin [Homo sapiens]
          Length = 190

 Score =  383 bits (983), Expect = e-107
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MEKVPGEMEIERRERSEELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYF 60
           MEKVPGEMEIERRERSEELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYF
Sbjct: 1   MEKVPGEMEIERRERSEELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYF 60

Query: 61  SQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVE 120
           SQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVE
Sbjct: 61  SQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVE 120

Query: 121 PVYFKILSGVILEVVAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQQVPNATT 180
           PVYFKILSGVILEVVAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQQVPNATT
Sbjct: 121 PVYFKILSGVILEVVAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQQVPNATT 180

Query: 181 PPATLPSSGP 190
           PPATLPSSGP
Sbjct: 181 PPATLPSSGP 190


>gi|4885397 hemoglobin, zeta [Homo sapiens]
          Length = 142

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 9/149 (6%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           L++ ER  + +MWA++    + +G   L R F++ P  K YF  F           S QL
Sbjct: 3   LTKTERTIIVSMWAKISTQADTIGTETLERLFLSHPQTKTYFPHFDLHPG------SAQL 56

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           R H  +V+ A+   V+++ D   +   L+ + + HA   +V+PV FK+LS  +L  +A  
Sbjct: 57  RAHGSKVVAAVGDAVKSIDD---IGGALSKLSELHAYILRVDPVNFKLLSHCLLVTLAAR 113

Query: 139 FASDFPPETQRAWAKLRGLIYSHVTAAYK 167
           F +DF  E   AW K   ++ S +T  Y+
Sbjct: 114 FPADFTAEAHAAWDKFLSVVSSVLTEKYR 142


>gi|44955888 myoglobin [Homo sapiens]
          Length = 154

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 3/153 (1%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           LS+ E + V  +W ++ A+    G  +L+R F   P   + F +FKH++   EM+ S  L
Sbjct: 3   LSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDL 62

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           +KH   V+ AL  +++     +     LA   ++HA KHK+   Y + +S  I++V+  +
Sbjct: 63  KKHGATVLTALGGILKKKGHHEAEIKPLA---QSHATKHKIPVKYLEFISECIIQVLQSK 119

Query: 139 FASDFPPETQRAWAKLRGLIYSHVTAAYKEVGW 171
              DF  + Q A  K   L    + + YKE+G+
Sbjct: 120 HPGDFGADAQGAMNKALELFRKDMASNYKELGF 152


>gi|44955885 myoglobin [Homo sapiens]
          Length = 154

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 3/153 (1%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           LS+ E + V  +W ++ A+    G  +L+R F   P   + F +FKH++   EM+ S  L
Sbjct: 3   LSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDL 62

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           +KH   V+ AL  +++     +     LA   ++HA KHK+   Y + +S  I++V+  +
Sbjct: 63  KKHGATVLTALGGILKKKGHHEAEIKPLA---QSHATKHKIPVKYLEFISECIIQVLQSK 119

Query: 139 FASDFPPETQRAWAKLRGLIYSHVTAAYKEVGW 171
              DF  + Q A  K   L    + + YKE+G+
Sbjct: 120 HPGDFGADAQGAMNKALELFRKDMASNYKELGF 152


>gi|4885477 myoglobin [Homo sapiens]
          Length = 154

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 3/153 (1%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           LS+ E + V  +W ++ A+    G  +L+R F   P   + F +FKH++   EM+ S  L
Sbjct: 3   LSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDL 62

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           +KH   V+ AL  +++     +     LA   ++HA KHK+   Y + +S  I++V+  +
Sbjct: 63  KKHGATVLTALGGILKKKGHHEAEIKPLA---QSHATKHKIPVKYLEFISECIIQVLQSK 119

Query: 139 FASDFPPETQRAWAKLRGLIYSHVTAAYKEVGW 171
              DF  + Q A  K   L    + + YKE+G+
Sbjct: 120 HPGDFGADAQGAMNKALELFRKDMASNYKELGF 152


>gi|4885393 epsilon globin [Homo sapiens]
          Length = 147

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 5/132 (3%)

Query: 23  ERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLRKHA 82
           E+ AV ++W+++  N E+ G   L R  V +P  +++F  F ++  P  +  +P+++ H 
Sbjct: 8   EKAAVTSLWSKM--NVEEAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHG 65

Query: 83  CRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEFASD 142
            +V+ +    ++N+   D +    A + + H  K  V+P  FK+L  V++ ++A  F  +
Sbjct: 66  KKVLTSFGDAIKNM---DNLKPAFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKE 122

Query: 143 FPPETQRAWAKL 154
           F PE Q AW KL
Sbjct: 123 FTPEVQAAWQKL 134


>gi|28302131 A-gamma globin [Homo sapiens]
          Length = 147

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 38/147 (25%), Positives = 77/147 (52%), Gaps = 5/147 (3%)

Query: 20  SEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLR 79
           +E ++  + ++W ++  N ED G   L R  V +P  +++F  F ++     +  +P+++
Sbjct: 5   TEEDKATITSLWGKV--NVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVK 62

Query: 80  KHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEF 139
            H  +V+ +L    ++L D   +    A + + H  K  V+P  FK+L  V++ V+A  F
Sbjct: 63  AHGKKVLTSLGDATKHLDD---LKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHF 119

Query: 140 ASDFPPETQRAWAKLRGLIYSHVTAAY 166
             +F PE Q +W K+   + S +++ Y
Sbjct: 120 GKEFTPEVQASWQKMVTAVASALSSRY 146


>gi|6715607 G-gamma globin [Homo sapiens]
          Length = 147

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 38/147 (25%), Positives = 78/147 (53%), Gaps = 5/147 (3%)

Query: 20  SEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLR 79
           +E ++  + ++W ++  N ED G   L R  V +P  +++F  F ++     +  +P+++
Sbjct: 5   TEEDKATITSLWGKV--NVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVK 62

Query: 80  KHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEF 139
            H  +V+ +L   +++L D   +    A + + H  K  V+P  FK+L  V++ V+A  F
Sbjct: 63  AHGKKVLTSLGDAIKHLDD---LKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHF 119

Query: 140 ASDFPPETQRAWAKLRGLIYSHVTAAY 166
             +F PE Q +W K+   + S +++ Y
Sbjct: 120 GKEFTPEVQASWQKMVTGVASALSSRY 146


>gi|4504349 beta globin [Homo sapiens]
          Length = 147

 Score = 71.2 bits (173), Expect = 5e-13
 Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 5/136 (3%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           L+  E+ AV A+W ++  N ++VG   L R  V +P  +++F  F  +  P  +  +P++
Sbjct: 4   LTPEEKSAVTALWGKV--NVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKV 61

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           + H  +V+GA +  + +L   D +    A + + H  K  V+P  F++L  V++ V+A  
Sbjct: 62  KAHGKKVLGAFSDGLAHL---DNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHH 118

Query: 139 FASDFPPETQRAWAKL 154
           F  +F P  Q A+ K+
Sbjct: 119 FGKEFTPPVQAAYQKV 134


>gi|4504347 alpha 1 globin [Homo sapiens]
          Length = 142

 Score = 70.5 bits (171), Expect = 8e-13
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           LS A++  V+A W ++ A+  + G   L R F++FP+ K YF  F           S Q+
Sbjct: 3   LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHG------SAQV 56

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           + H  +V  AL   V ++   D + + L+ +   HA K +V+PV FK+LS  +L  +A  
Sbjct: 57  KGHGKKVADALTNAVAHV---DDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAH 113

Query: 139 FASDFPPETQRAWAKLRGLIYSHVTAAYK 167
             ++F P    +  K    + + +T+ Y+
Sbjct: 114 LPAEFTPAVHASLDKFLASVSTVLTSKYR 142


>gi|4504345 alpha 2 globin [Homo sapiens]
          Length = 142

 Score = 70.5 bits (171), Expect = 8e-13
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           LS A++  V+A W ++ A+  + G   L R F++FP+ K YF  F           S Q+
Sbjct: 3   LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHG------SAQV 56

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           + H  +V  AL   V ++   D + + L+ +   HA K +V+PV FK+LS  +L  +A  
Sbjct: 57  KGHGKKVADALTNAVAHV---DDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAH 113

Query: 139 FASDFPPETQRAWAKLRGLIYSHVTAAYK 167
             ++F P    +  K    + + +T+ Y+
Sbjct: 114 LPAEFTPAVHASLDKFLASVSTVLTSKYR 142


>gi|4504351 delta globin [Homo sapiens]
          Length = 147

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 38/136 (27%), Positives = 73/136 (53%), Gaps = 5/136 (3%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           L+  E+ AV A+W ++  N + VG   L R  V +P  +++F  F  +  P  +  +P++
Sbjct: 4   LTPEEKTAVNALWGKV--NVDAVGGEALGRLLVVYPWTQRFFESFGDLSSPDAVMGNPKV 61

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           + H  +V+GA +  + +L   D +    + + + H  K  V+P  F++L  V++ V+A  
Sbjct: 62  KAHGKKVLGAFSDGLAHL---DNLKGTFSQLSELHCDKLHVDPENFRLLGNVLVCVLARN 118

Query: 139 FASDFPPETQRAWAKL 154
           F  +F P+ Q A+ K+
Sbjct: 119 FGKEFTPQMQAAYQKV 134


>gi|4885395 theta 1 globin [Homo sapiens]
          Length = 142

 Score = 67.4 bits (163), Expect = 7e-12
 Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           LS  +R  V+A+W +L +N        L R F+ FP+ K YFS   H++       S Q+
Sbjct: 3   LSAEDRALVRALWKKLGSNVGVYTTEALERTFLAFPATKTYFS---HLD---LSPGSSQV 56

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
           R H  +V  AL+  VE L D   +   L+ +   HA + +V+P  F++L   +L  +A  
Sbjct: 57  RAHGQKVADALSLAVERLDD---LPHALSALSHLHACQLRVDPASFQLLGHCLLVTLARH 113

Query: 139 FASDFPPETQRAWAKLRGLIYSHVTAAYK 167
           +  DF P  Q +  K    + S + + Y+
Sbjct: 114 YPGDFSPALQASLDKFLSHVISALVSEYR 142


>gi|51510893 hemoglobin mu chain [Homo sapiens]
          Length = 141

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQL 78
           LS  ER  +  +W  +  +    G  +L+R F  +PS K YF      +D      + QL
Sbjct: 2   LSAQERAQIAQVWDLIAGHEAQFGAELLLRLFTVYPSTKVYFPHLSACQD------ATQL 55

Query: 79  RKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEE 138
             H  R++ A+   V+++   D + + L+ +   HAL  +V+P  F +L      V+A  
Sbjct: 56  LSHGQRMLAAVGAAVQHV---DNLRAALSPLADLHALVLRVDPANFPLLIQCFHVVLASH 112

Query: 139 FASDFPPETQRAWAKLRGLIYSHVTAAYK 167
              +F  + Q AW K    +   +T  Y+
Sbjct: 113 LQDEFTVQMQAAWDKFLTGVAVVLTEKYR 141


>gi|10864065 neuroglobin [Homo sapiens]
          Length = 151

 Score = 43.9 bits (102), Expect = 8e-05
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 8/144 (5%)

Query: 19  LSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFS----QFKHMEDPLEMER 74
           +   E + ++  W  +  +  + G  +  R F   P     F     QF   ED L    
Sbjct: 1   MERPEPELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQYNCRQFSSPEDCLS--- 57

Query: 75  SPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEV 134
           SP+   H  +VM  ++  V N+ D   +   LA +G+ H     V+   F  +   +L +
Sbjct: 58  SPEFLDHIRKVMLVIDAAVTNVEDLSSLEEYLASLGRKHRAV-GVKLSSFSTVGESLLYM 116

Query: 135 VAEEFASDFPPETQRAWAKLRGLI 158
           + +     F P T+ AW++L G +
Sbjct: 117 LEKCLGPAFTPATRAAWSQLYGAV 140


>gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sapiens]
          Length = 4486

 Score = 30.4 bits (67), Expect = 0.96
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)

Query: 63   FKHMEDPLEMERSPQLRKHACRVMG------------ALNTVVENLHDPDKVSSVLALVG 110
            F  +EDP+E  +SP L  H    +G               T+VE L + ++V++V+ LV 
Sbjct: 2740 FDDIEDPVEQTQSPNLYCHFANGIGEPKYMPVQSWELLTQTLVEALENHNEVNTVMDLVL 2799

Query: 111  KAHALKH 117
               A++H
Sbjct: 2800 FEDAMRH 2806


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 13/151 (8%)

Query: 7    EMEIERRERSEELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHM 66
            E  ++  ERS E  E   +     W R   N E V     VR+     S+ + F  F  +
Sbjct: 1325 ESTLDGLERSRERQERRIQVTLRKWERFETNKETV-----VRYLFQTGSSHERFLSFSSL 1379

Query: 67   ED-PLEMERSPQLRKHACRV-MGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYF 124
            E    E+E++ +  K    + + A N V E    P    +   L  +A ++K +V+ +  
Sbjct: 1380 ESLSSELEQTKEFSKRTESIAVQAENLVKEASEIPLGPQNKQLLQQQAKSIKEQVKKLED 1439

Query: 125  KILSGV-ILEVVA---EEFASDFPPETQRAW 151
             +   +  +E+V    + F S+F  ET   W
Sbjct: 1440 TLEEDIKTMEMVKTKWDHFGSNF--ETLSVW 1468


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 13/151 (8%)

Query: 7    EMEIERRERSEELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHM 66
            E  ++  ERS E  E   +     W R   N E V     VR+     S+ + F  F  +
Sbjct: 1318 ESTLDGLERSRERQERRIQVTLRKWERFETNKETV-----VRYLFQTGSSHERFLSFSSL 1372

Query: 67   ED-PLEMERSPQLRKHACRV-MGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYF 124
            E    E+E++ +  K    + + A N V E    P    +   L  +A ++K +V+ +  
Sbjct: 1373 ESLSSELEQTKEFSKRTESIAVQAENLVKEASEIPLGPQNKQLLQQQAKSIKEQVKKLED 1432

Query: 125  KILSGV-ILEVVA---EEFASDFPPETQRAW 151
             +   +  +E+V    + F S+F  ET   W
Sbjct: 1433 TLEEDIKTMEMVKTKWDHFGSNF--ETLSVW 1461


>gi|195972881 transmembrane protein 194A isoform a [Homo sapiens]
          Length = 444

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 9/113 (7%)

Query: 69  PLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYF---K 125
           PLE ERS  L     ++MG L  +   +  P    +++ +      L+H ++ +Y    K
Sbjct: 270 PLENERSINLLTWTLQLMG-LCFMYSGIQIPHIALAIIIIALCTKNLEHPIQWLYITCRK 328

Query: 126 ILSGVILEV-----VAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQ 173
           +  G    V       EE+      ET++A  +LR    S   +A+K V  +Q
Sbjct: 329 VCKGAEKPVPPRLLTEEEYRIQGEVETRKALEELREFCNSPDCSAWKTVSRIQ 381


>gi|195972879 transmembrane protein 194A isoform b [Homo sapiens]
          Length = 371

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 9/113 (7%)

Query: 69  PLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYF---K 125
           PLE ERS  L     ++MG L  +   +  P    +++ +      L+H ++ +Y    K
Sbjct: 197 PLENERSINLLTWTLQLMG-LCFMYSGIQIPHIALAIIIIALCTKNLEHPIQWLYITCRK 255

Query: 126 ILSGVILEV-----VAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQ 173
           +  G    V       EE+      ET++A  +LR    S   +A+K V  +Q
Sbjct: 256 VCKGAEKPVPPRLLTEEEYRIQGEVETRKALEELREFCNSPDCSAWKTVSRIQ 308


>gi|155030220 PDS5, regulator of cohesion maintenance, homolog A
           isoform 3 [Homo sapiens]
          Length = 600

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 65  HMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDK 101
           H+ + L++ + P    +   + G L T+ +NL DP K
Sbjct: 515 HVRELLDLHKQPTSEANCSAMFGKLMTIAKNLPDPGK 551


>gi|155030218 PDS5, regulator of cohesion maintenance, homolog A
           isoform 2 [Homo sapiens]
          Length = 1297

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 65  HMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDK 101
           H+ + L++ + P    +   + G L T+ +NL DP K
Sbjct: 475 HVRELLDLHKQPTSEANCSAMFGKLMTIAKNLPDPGK 511


>gi|155030216 PDS5, regulator of cohesion maintenance, homolog A
           isoform 1 [Homo sapiens]
          Length = 1337

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 65  HMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDK 101
           H+ + L++ + P    +   + G L T+ +NL DP K
Sbjct: 515 HVRELLDLHKQPTSEANCSAMFGKLMTIAKNLPDPGK 551


>gi|187960079 MAD2 homolog [Homo sapiens]
          Length = 211

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 6/104 (5%)

Query: 38  CEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLH 97
           CE + VA+ +  +V        F + K    P++M   P+L ++    +  +  ++E  +
Sbjct: 20  CEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLLEK-N 78

Query: 98  DPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEFAS 141
           D +KV  V+ ++ K H     VE   F+I    +L + ++   S
Sbjct: 79  DVEKV--VVVILDKEH---RPVEKFVFEITQPPLLSISSDSLLS 117


>gi|187960073 MAD2 homolog [Homo sapiens]
          Length = 211

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 6/104 (5%)

Query: 38  CEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLH 97
           CE + VA+ +  +V        F + K    P++M   P+L ++    +  +  ++E  +
Sbjct: 20  CEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLLEK-N 78

Query: 98  DPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEFAS 141
           D +KV  V+ ++ K H     VE   F+I    +L + ++   S
Sbjct: 79  DVEKV--VVVILDKEH---RPVEKFVFEITQPPLLSISSDSLLS 117


>gi|24308277 SPARC related modular calcium binding 2 [Homo sapiens]
          Length = 457

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 71  EMERSPQLRKHA--CRVMGALNT-VVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKIL 127
           +++  P  +KH     V+ AL+T +V    DP   S  L+    +H L+ +V   YFK+L
Sbjct: 311 QLQGCPGAKKHEFLTSVLDALSTDMVHAASDPSSSSGRLSEPDPSHTLEERVVHWYFKLL 370


>gi|21359945 chromosome condensation protein G [Homo sapiens]
          Length = 1015

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 21/102 (20%)

Query: 39  EDVGVAILVRFFVNFPSAK-QYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLH 97
           + +  A+L+R     P+ + Q       ++DP + E         C V+ A  T++EN  
Sbjct: 141 DKINKAMLIRLKDKIPNVRIQAVLALSRLQDPKDDE---------CPVVNAYATLIENDS 191

Query: 98  DPDKVSSVLA-----------LVGKAHALKHKVEPVYFKILS 128
           +P+   +VL+           +VG+   +K  V  + +++L+
Sbjct: 192 NPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLA 233


>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
            sapiens]
          Length = 1907

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 1    MEKVPGEMEIERRERSEELSEAERKAVQA 29
            ++K   + E ER+ER   LS A+ KAV A
Sbjct: 1534 LQKKLSQEEYERQEREHRLSAADEKAVSA 1562


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,489,683
Number of Sequences: 37866
Number of extensions: 300359
Number of successful extensions: 818
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 788
Number of HSP's gapped (non-prelim): 30
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.