HBB 28824

Name: HBB	Sequence: fasta or formatted (147aa)		NCBI GI: 4504349
Description: beta globin		Referenced in: Major Disease Loci Oxygen Sensing and Hemoglobin Polymorphism
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 15 2 C cysteine 1.4 2 1 D aspartate 4.8 7 1 E glutamate 5.4 8 2 F phenylalanine 5.4 8 2 G glycine 8.8 13 2 H histidine 6.1 9 2 I isoleucine 0.0 0 0 K lysine 7.5 11 2 L leucine 12.2 18 2 M methionine 1.4 2 1 N asparagine 4.1 6 1 P proline 4.8 7 2 Q glutamine 2.0 3 1 R arginine 2.0 3 1 S serine 3.4 5 1 T threonine 4.8 7 1 V valine 12.2 18 2 W tryptophan 1.4 2 1 Y tyrosine 2.0 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 beta globin HBD 0.925 delta globin HBE1 0.761 epsilon globin HBG2 0.743 G-gamma globin HBG1 0.729 A-gamma globin HBA1 0.318 alpha 1 globin HBA2 0.318 alpha 2 globin HBZ 0.261 hemoglobin, zeta HBQ1 0.246 theta 1 globin HBM 0.214 hemoglobin mu chain CYGB 0.164 cytoglobin KIAA0802 0.014 hypothetical protein LOC23255 ARHGAP8 0.011 Rho GTPase activating protein 8 isoform 1 LRRC18 0.007 leucine rich repeat containing 18 BDP1 0.007 transcription factor-like nuclear regulator Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.