Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HBG2 Sequence: fasta or formatted (147aa) NCBI GI: 6715607
Description:

G-gamma globin

Referenced in:

Oxygen Sensing and Hemoglobin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         11           1
 C cysteine            0.7          1           1
 D aspartate           5.4          8           2
 E glutamate           5.4          8           2
 F phenylalanine       5.4          8           2
 G glycine             8.8         13           2
 H histidine           4.8          7           1
 I isoleucine          2.7          4           1
 K lysine              8.2         12           2
 L leucine            11.6         17           2
 M methionine          2.0          3           1
 N asparagine          3.4          5           1
 P proline             2.7          4           1
 Q glutamine           2.7          4           1
 R arginine            2.0          3           1
 S serine              7.5         11           2
 T threonine           6.8         10           1
 V valine              8.8         13           2
 W tryptophan          2.0          3           1
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G-gamma globin 
HBG1                  0.985   A-gamma globin 
HBE1                  0.815   epsilon globin 
HBB                   0.756   beta globin 
HBD                   0.738   delta globin 
HBA1                  0.309   alpha 1 globin 
HBA2                  0.309   alpha 2 globin 
HBZ                   0.309   hemoglobin, zeta 
HBM                   0.258   hemoglobin mu chain 
HBQ1                  0.255   theta 1 globin 
CYGB                  0.178   cytoglobin 
MB                    0.113   myoglobin 
MB                    0.113   myoglobin 
MB                    0.113   myoglobin 
NGB                   0.051   neuroglobin 
LRRK2                 0.015   leucine-rich repeat kinase 2 
KIAA0802              0.011   hypothetical protein LOC23255 
ZNF385C               0.011   PREDICTED: zinc finger protein 385C 
ZNF385C               0.011   PREDICTED: zinc finger protein 385C 
ZNF385C               0.011   PREDICTED: zinc finger protein 385C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press