Guide to the Human Genome
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Name: MB Sequence: fasta or formatted (154aa) NCBI GI: 44955888
Description:

myoglobin

Referenced in:

Oxygen Sensing and Hemoglobin

Other entries for this name:
alt mRNA [154aa] myoglobin
alt mRNA [154aa] myoglobin
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         12           1
 C cysteine            0.6          1           1
 D aspartate           5.2          8           1
 E glutamate           9.1         14           1
 F phenylalanine       4.5          7           1
 G glycine             9.7         15           2
 H histidine           5.8          9           2
 I isoleucine          5.2          8           2
 K lysine             13.0         20           3
 L leucine            11.0         17           1
 M methionine          2.6          4           1
 N asparagine          1.9          3           1
 P proline             3.2          5           1
 Q glutamine           4.5          7           1
 R arginine            1.3          2           1
 S serine              4.5          7           1
 T threonine           2.6          4           1
 V valine              4.5          7           1
 W tryptophan          1.3          2           1
 Y tyrosine            1.3          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myoglobin 
MB                    1.000   myoglobin 
MB                    1.000   myoglobin 
CYGB                  0.186   cytoglobin 
HBZ                   0.155   hemoglobin, zeta 
HBG1                  0.107   A-gamma globin 
HBG2                  0.107   G-gamma globin 
HBE1                  0.093   epsilon globin 
HBA1                  0.093   alpha 1 globin 
HBA2                  0.093   alpha 2 globin 
HBQ1                  0.093   theta 1 globin 
HBM                   0.082   hemoglobin mu chain 
DLC1                  0.014   deleted in liver cancer 1 isoform 1 
DLC1                  0.014   deleted in liver cancer 1 isoform 2 
LOC100291758          0.010   PREDICTED: similar to UDP-glucuronosyltransferase 2...
LOC100289734          0.010   PREDICTED: hypothetical protein XP_002346669 
MYO9B                 0.010   myosin IXB isoform 2 
MYO9B                 0.010   myosin IXB isoform 1 
RGL2                  0.010   ral guanine nucleotide dissociation stimulator-like 2...
DST                   0.010   dystonin isoform 1e precursor 
DDX23                 0.010   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
GOLGA1                0.010   golgin 97 
TMCO1                 0.010   transmembrane and coiled-coil domains 1 
RBM26                 0.010   RNA binding motif protein 26 
KCNQ1                 0.007   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ1                 0.007   potassium voltage-gated channel, KQT-like subfamily,...
DOCK1                 0.007   dedicator of cytokinesis 1 
ATAD3C                0.007   ATPase family, AAA domain containing 3C 
APOB                  0.007   apolipoprotein B precursor 
FADS3                 0.007   fatty acid desaturase 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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