Guide to the Human Genome
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Name: TMEM194A Sequence: fasta or formatted (444aa) NCBI GI: 195972881
Description:

transmembrane protein 194A isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {371aa} transmembrane protein 194A isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         17           1
 C cysteine            3.2         14           1
 D aspartate           2.3         10           1
 E glutamate           7.7         34           3
 F phenylalanine       5.0         22           2
 G glycine             6.3         28           4
 H histidine           1.1          5           1
 I isoleucine          8.1         36           4
 K lysine              5.4         24           2
 L leucine            11.3         50           3
 M methionine          2.0          9           1
 N asparagine          3.4         15           2
 P proline             3.8         17           2
 Q glutamine           4.3         19           2
 R arginine            4.3         19           2
 S serine              8.1         36           2
 T threonine           5.2         23           1
 V valine              8.1         36           2
 W tryptophan          2.3         10           1
 Y tyrosine            4.5         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 194A isoform a 
TMEM194A              0.697   transmembrane protein 194A isoform b 
TMEM194B              0.271   transmembrane protein 194B 
SLC2A14               0.008   glucose transporter 14 
STRN4                 0.006   zinedin isoform 2 
STRN4                 0.006   zinedin isoform 1 
ATP11A                0.006   ATPase, class VI, type 11A isoform b 
ATP11A                0.006   ATPase, class VI, type 11A isoform a 
CECR6                 0.005   cat eye syndrome chromosome region, candidate 6 iso...
CECR6                 0.005   cat eye syndrome chromosome region, candidate 6 isof...
DLGAP3                0.005   discs, large (Drosophila) homolog-associated protei...
CATSPER2              0.005   sperm-associated cation channel 2 isoform 4 
CATSPER2              0.005   sperm-associated cation channel 2 isoform 2 
GPR155                0.005   G protein-coupled receptor 155 isoform 9 
GPR155                0.005   G protein-coupled receptor 155 isoform 10 
CATSPER2              0.005   sperm-associated cation channel 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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