Guide to the Human Genome
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Name: HBZ Sequence: fasta or formatted (142aa) NCBI GI: 4885397
Description:

hemoglobin, zeta

Referenced in:

Oxygen Sensing and Hemoglobin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         16           2
 C cysteine            0.7          1           1
 D aspartate           5.6          8           2
 E glutamate           4.2          6           1
 F phenylalanine       4.9          7           1
 G glycine             4.2          6           2
 H histidine           4.9          7           1
 I isoleucine          4.9          7           2
 K lysine              6.3          9           1
 L leucine            12.0         17           2
 M methionine          1.4          2           1
 N asparagine          0.7          1           1
 P proline             3.5          5           1
 Q glutamine           2.1          3           1
 R arginine            4.2          6           1
 S serine              9.2         13           2
 T threonine           8.5         12           1
 V valine              7.7         11           2
 W tryptophan          1.4          2           1
 Y tyrosine            2.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hemoglobin, zeta 
HBA1                  0.572   alpha 1 globin 
HBA2                  0.572   alpha 2 globin 
HBQ1                  0.479   theta 1 globin 
HBM                   0.416   hemoglobin mu chain 
HBG1                  0.331   A-gamma globin 
HBG2                  0.331   G-gamma globin 
HBE1                  0.319   epsilon globin 
HBD                   0.296   delta globin 
HBB                   0.284   beta globin 
CYGB                  0.226   cytoglobin 
MB                    0.175   myoglobin 
MB                    0.175   myoglobin 
MB                    0.175   myoglobin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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