Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 194578909
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194578909 eukaryotic translation initiation factor 4E
isoform 2 [Homo sapiens]
(248 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194578909 eukaryotic translation initiation factor 4E isoform... 523 e-149
gi|4503535 eukaryotic translation initiation factor 4E isoform 1... 443 e-125
gi|169211405 PREDICTED: similar to hCG1777996 [Homo sapiens] 438 e-123
gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens] 438 e-123
gi|169210992 PREDICTED: hypothetical protein LOC100131693 [Homo ... 438 e-123
gi|194578907 eukaryotic translation initiation factor 4E isoform... 431 e-121
gi|150378456 eukaryotic translation initiation factor 4E family ... 286 9e-78
gi|4757702 eukaryotic translation initiation factor 4E member 2 ... 117 9e-27
gi|197382708 eukaryotic translation initiation factor 4E family ... 70 1e-12
gi|153792103 tetratricopeptide repeat domain 22 isoform 2 [Homo ... 46 3e-05
gi|34147532 myosin, light chain 10, regulatory [Homo sapiens] 44 2e-04
gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens] 42 5e-04
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 42 6e-04
gi|197382664 eukaryotic translation initiation factor 4E family ... 40 0.002
gi|197382649 eukaryotic translation initiation factor 4E family ... 40 0.002
gi|27659734 eukaryotic translation initiation factor 4E family m... 40 0.002
gi|211971008 acyl-Coenzyme A dehydrogenase family, member 10 iso... 40 0.002
gi|170172518 microtubule associated monoxygenase, calponin and L... 37 0.016
gi|109255236 centrosomal protein 63 isoform d [Homo sapiens] 35 0.061
gi|239756812 PREDICTED: similar to RAD52 motif 1 [Homo sapiens] 34 0.14
gi|239755282 PREDICTED: similar to Tripartite motif-containing p... 34 0.14
gi|239752570 PREDICTED: hypothetical protein XP_002348292 [Homo ... 34 0.14
gi|214830753 meckelin isoform 2 [Homo sapiens] 30 1.5
gi|239751290 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 29 4.3
gi|189095248 adiponectin receptor 1 [Homo sapiens] 28 5.7
gi|21361519 adiponectin receptor 1 [Homo sapiens] 28 5.7
gi|8922785 hypothetical protein LOC55267 [Homo sapiens] 28 5.7
gi|31442761 amiloride-sensitive cation channel 5, intestinal [Ho... 28 7.4
gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1... 28 7.4
>gi|194578909 eukaryotic translation initiation factor 4E isoform 2
[Homo sapiens]
Length = 248
Score = 523 bits (1348), Expect = e-149
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
Query: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
Query: 121 QRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDV 180
QRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDV
Sbjct: 121 QRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDV 180
Query: 181 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 240
CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS
Sbjct: 181 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 240
Query: 241 TTKNRFVV 248
TTKNRFVV
Sbjct: 241 TTKNRFVV 248
>gi|4503535 eukaryotic translation initiation factor 4E isoform 1
[Homo sapiens]
Length = 217
Score = 443 bits (1139), Expect = e-125
Identities = 217/248 (87%), Positives = 217/248 (87%), Gaps = 31/248 (12%)
Query: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
Query: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
Query: 121 QRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDV 180
QRRSDLDRFWLET LLCLIGESFDDYSDDV
Sbjct: 121 QRRSDLDRFWLET-------------------------------LLCLIGESFDDYSDDV 149
Query: 181 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 240
CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS
Sbjct: 150 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 209
Query: 241 TTKNRFVV 248
TTKNRFVV
Sbjct: 210 TTKNRFVV 217
>gi|169211405 PREDICTED: similar to hCG1777996 [Homo sapiens]
Length = 217
Score = 438 bits (1127), Expect = e-123
Identities = 215/248 (86%), Positives = 216/248 (87%), Gaps = 31/248 (12%)
Query: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
MATVEPETTPTPNPPTTE+EKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1 MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
Query: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
LISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61 WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
Query: 121 QRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDV 180
QRRSDLDRFWLET LLCLIGESFDDYSDDV
Sbjct: 121 QRRSDLDRFWLET-------------------------------LLCLIGESFDDYSDDV 149
Query: 181 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 240
CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS
Sbjct: 150 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 209
Query: 241 TTKNRFVV 248
TTKNRFVV
Sbjct: 210 TTKNRFVV 217
>gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens]
Length = 217
Score = 438 bits (1127), Expect = e-123
Identities = 215/248 (86%), Positives = 216/248 (87%), Gaps = 31/248 (12%)
Query: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
MATVEPETTPTPNPPTTE+EKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1 MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
Query: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
LISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61 WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
Query: 121 QRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDV 180
QRRSDLDRFWLET LLCLIGESFDDYSDDV
Sbjct: 121 QRRSDLDRFWLET-------------------------------LLCLIGESFDDYSDDV 149
Query: 181 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 240
CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS
Sbjct: 150 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 209
Query: 241 TTKNRFVV 248
TTKNRFVV
Sbjct: 210 TTKNRFVV 217
>gi|169210992 PREDICTED: hypothetical protein LOC100131693 [Homo
sapiens]
Length = 217
Score = 438 bits (1127), Expect = e-123
Identities = 215/248 (86%), Positives = 216/248 (87%), Gaps = 31/248 (12%)
Query: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
MATVEPETTPTPNPPTTE+EKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1 MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
Query: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
LISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61 WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
Query: 121 QRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDV 180
QRRSDLDRFWLET LLCLIGESFDDYSDDV
Sbjct: 121 QRRSDLDRFWLET-------------------------------LLCLIGESFDDYSDDV 149
Query: 181 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 240
CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS
Sbjct: 150 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 209
Query: 241 TTKNRFVV 248
TTKNRFVV
Sbjct: 210 TTKNRFVV 217
>gi|194578907 eukaryotic translation initiation factor 4E isoform 3
[Homo sapiens]
Length = 237
Score = 431 bits (1109), Expect = e-121
Identities = 211/242 (87%), Positives = 211/242 (87%), Gaps = 31/242 (12%)
Query: 7 ETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKF 66
ETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKF
Sbjct: 27 ETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKF 86
Query: 67 DTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDL 126
DTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDL
Sbjct: 87 DTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDL 146
Query: 127 DRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDVCGAVVN 186
DRFWLET LLCLIGESFDDYSDDVCGAVVN
Sbjct: 147 DRFWLET-------------------------------LLCLIGESFDDYSDDVCGAVVN 175
Query: 187 VRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRF 246
VRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRF
Sbjct: 176 VRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRF 235
Query: 247 VV 248
VV
Sbjct: 236 VV 237
>gi|150378456 eukaryotic translation initiation factor 4E family
member 1B [Homo sapiens]
Length = 242
Score = 286 bits (733), Expect = 9e-78
Identities = 145/251 (57%), Positives = 170/251 (67%), Gaps = 44/251 (17%)
Query: 7 ETTPT----PNPPTT-----EEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQ 57
E TPT PN P T + +T EV HPLQNRWALWFFKND+S+ WQ
Sbjct: 27 ERTPTGEKSPNSPRTLLSLRGKARTGGPMEVKLE----LHPLQNRWALWFFKNDRSRAWQ 82
Query: 58 ANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITL 117
NL L++K DTVEDFWALY+HIQL+S L GCDY+LFKDGI+PMWED +NKRGGRWL++L
Sbjct: 83 DNLHLVTKVDTVEDFWALYSHIQLASKLSSGCDYALFKDGIQPMWEDSRNKRGGRWLVSL 142
Query: 118 NKQQRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYS 177
KQQR +LDR WLET LLCLIGESF+++S
Sbjct: 143 AKQQRHIELDRLWLET-------------------------------LLCLIGESFEEHS 171
Query: 178 DDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATK 237
+VCGAVVN+R KGDKIA+WT E EN+ V H+GRVYKERLGL PK +IGYQ+HADTATK
Sbjct: 172 REVCGAVVNIRTKGDKIAVWTREAENQAGVLHVGRVYKERLGLSPKTIIGYQAHADTATK 231
Query: 238 SGSTTKNRFVV 248
S S KN+FVV
Sbjct: 232 SNSLAKNKFVV 242
>gi|4757702 eukaryotic translation initiation factor 4E member 2
[Homo sapiens]
Length = 245
Score = 117 bits (293), Expect = 9e-27
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 47/241 (19%)
Query: 18 EEEKTESNQEVANPEHYI------KHPLQNRWALWFFKN-----DKSKTWQANLRLISKF 66
E+EKTE ++ ++ + +HPLQ + W+ + S++++ N++ I F
Sbjct: 29 EKEKTERDKNQSSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTF 88
Query: 67 DTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDL 126
+VE FW Y+H+ +L D+ LFK+GI+PMWED+ NK GG+W+I L K
Sbjct: 89 ASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRK------- 141
Query: 127 DRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDVCGAVVN 186
L S W +I L ++GE F +++CGAVV+
Sbjct: 142 ---------------GLASRCWENLI-------------LAMLGEQF-MVGEEICGAVVS 172
Query: 187 VRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRF 246
VR + D I+IW ++ I + L LPP ++ Y++H D+ G R
Sbjct: 173 VRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIKMPGRLGPQRL 232
Query: 247 V 247
+
Sbjct: 233 L 233
>gi|197382708 eukaryotic translation initiation factor 4E family
member 3 isoform a [Homo sapiens]
Length = 224
Score = 70.5 bits (171), Expect = 1e-12
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 42/213 (19%)
Query: 38 PLQNRWALWFFKNDKSKT---WQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94
PL + W W ++ T +NL+ I TV+ FW++YN+I ++L C Y L
Sbjct: 48 PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107
Query: 95 KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILP 154
+ P+WE+E N +GG W + + K S W ++
Sbjct: 108 RGERRPLWEEESNAKGGVWKMKVPKDS----------------------TSTVWKEL--- 142
Query: 155 LQPPKVLELQLLCLIGESFDDYS---DDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 211
LL IGE F D + D+V G V+VR + D + +W T +
Sbjct: 143 ----------LLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNASLVGEATVLE 192
Query: 212 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 244
++Y+ + K V Y+ H + G K+
Sbjct: 193 KIYELLPHITFKAVF-YKPHEEHHAFEGGRGKH 224
>gi|153792103 tetratricopeptide repeat domain 22 isoform 2 [Homo
sapiens]
Length = 372
Score = 45.8 bits (107), Expect = 3e-05
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 134 RWDLAMLPRLVSNFWPQVILPLQPPKVLELQL 165
R L MLPRLVSN W Q +LP +PPKVLE Q+
Sbjct: 341 RRGLTMLPRLVSNSWAQAVLPPRPPKVLEFQV 372
>gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]
Length = 226
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Query: 139 MLPRLVSNFWPQVILPLQPPKVLELQ 164
ML RLVSN WPQVILP +PPKVL LQ
Sbjct: 1 MLLRLVSNSWPQVILPPRPPKVLGLQ 26
>gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens]
Length = 614
Score = 42.0 bits (97), Expect = 5e-04
Identities = 20/30 (66%), Positives = 21/30 (70%)
Query: 134 RWDLAMLPRLVSNFWPQVILPLQPPKVLEL 163
RW AMLPRLVSN W Q I +PPKVL L
Sbjct: 585 RWGFAMLPRLVSNSWVQAIHLPRPPKVLRL 614
>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
sapiens]
Length = 1570
Score = 41.6 bits (96), Expect = 6e-04
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 132 ETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQ 164
E R L +L RL+S+FW Q +LP PPKVL LQ
Sbjct: 456 EKRQSLTVLTRLISSFWAQAVLPPWPPKVLGLQ 488
>gi|197382664 eukaryotic translation initiation factor 4E family
member 3 isoform b [Homo sapiens]
Length = 118
Score = 40.0 bits (92), Expect = 0.002
Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 39/148 (26%)
Query: 100 PMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPK 159
P+WE+E N +GG W + + K S W ++
Sbjct: 7 PLWEEESNAKGGVWKMKVPKDS----------------------TSTVWKEL-------- 36
Query: 160 VLELQLLCLIGESFDDYS---DDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKE 216
LL IGE F D + D+V G V+VR + D + +W T + ++Y+
Sbjct: 37 -----LLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNASLVGEATVLEKIYEL 91
Query: 217 RLGLPPKIVIGYQSHADTATKSGSTTKN 244
+ K V Y+ H + G K+
Sbjct: 92 LPHITFKAVF-YKPHEEHHAFEGGRGKH 118
>gi|197382649 eukaryotic translation initiation factor 4E family
member 3 isoform b [Homo sapiens]
Length = 118
Score = 40.0 bits (92), Expect = 0.002
Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 39/148 (26%)
Query: 100 PMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPK 159
P+WE+E N +GG W + + K S W ++
Sbjct: 7 PLWEEESNAKGGVWKMKVPKDS----------------------TSTVWKEL-------- 36
Query: 160 VLELQLLCLIGESFDDYS---DDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKE 216
LL IGE F D + D+V G V+VR + D + +W T + ++Y+
Sbjct: 37 -----LLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNASLVGEATVLEKIYEL 91
Query: 217 RLGLPPKIVIGYQSHADTATKSGSTTKN 244
+ K V Y+ H + G K+
Sbjct: 92 LPHITFKAVF-YKPHEEHHAFEGGRGKH 118
>gi|27659734 eukaryotic translation initiation factor 4E family
member 3 isoform b [Homo sapiens]
Length = 118
Score = 40.0 bits (92), Expect = 0.002
Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 39/148 (26%)
Query: 100 PMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPK 159
P+WE+E N +GG W + + K S W ++
Sbjct: 7 PLWEEESNAKGGVWKMKVPKDS----------------------TSTVWKEL-------- 36
Query: 160 VLELQLLCLIGESFDDYS---DDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKE 216
LL IGE F D + D+V G V+VR + D + +W T + ++Y+
Sbjct: 37 -----LLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNASLVGEATVLEKIYEL 91
Query: 217 RLGLPPKIVIGYQSHADTATKSGSTTKN 244
+ K V Y+ H + G K+
Sbjct: 92 LPHITFKAVF-YKPHEEHHAFEGGRGKH 118
>gi|211971008 acyl-Coenzyme A dehydrogenase family, member 10
isoform a [Homo sapiens]
Length = 1090
Score = 39.7 bits (91), Expect = 0.002
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 134 RWDLAMLPRLVSNFWPQVILPLQPPKVLELQL 165
R A+LP+LVSN W Q I P PPKV+ LQ+
Sbjct: 231 RQGFAVLPKLVSNSWAQAIYPPYPPKVVRLQV 262
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 37.0 bits (84), Expect = 0.016
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 135 WDLAMLPRLVSNFWPQVILPLQPPKVLELQL 165
W LPR+VSN W Q+I P QPP VL Q+
Sbjct: 936 WVSPWLPRMVSNSWAQMIHPPQPPTVLGSQM 966
>gi|109255236 centrosomal protein 63 isoform d [Homo sapiens]
Length = 475
Score = 35.0 bits (79), Expect = 0.061
Identities = 19/35 (54%), Positives = 20/35 (57%)
Query: 131 LETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQL 165
L RW ML LV NF Q I Q PKVLELQ+
Sbjct: 441 LHERWGFTMLSSLVLNFGIQAIRQPQRPKVLELQV 475
>gi|239756812 PREDICTED: similar to RAD52 motif 1 [Homo sapiens]
Length = 236
Score = 33.9 bits (76), Expect = 0.14
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 134 RWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCL 168
R LA+L LV N WPQ ILP PP+ + +L L
Sbjct: 33 RQGLAVLLMLVLNSWPQAILPSWPPREQDYRLFLL 67
>gi|239755282 PREDICTED: similar to Tripartite motif-containing
protein 43-like protein 1 [Homo sapiens]
Length = 185
Score = 33.9 bits (76), Expect = 0.14
Identities = 18/33 (54%), Positives = 20/33 (60%)
Query: 130 WLETRWDLAMLPRLVSNFWPQVILPLQPPKVLE 162
WL R L MLPRLV + Q IL QPPK L+
Sbjct: 5 WLTKRQGLIMLPRLVLDSLDQAILLPQPPKELD 37
>gi|239752570 PREDICTED: hypothetical protein XP_002348292 [Homo
sapiens]
Length = 185
Score = 33.9 bits (76), Expect = 0.14
Identities = 18/33 (54%), Positives = 20/33 (60%)
Query: 130 WLETRWDLAMLPRLVSNFWPQVILPLQPPKVLE 162
WL R L MLPRLV + Q IL QPPK L+
Sbjct: 5 WLTKRQGLIMLPRLVLDSLDQAILLPQPPKELD 37
>gi|214830753 meckelin isoform 2 [Homo sapiens]
Length = 914
Score = 30.4 bits (67), Expect = 1.5
Identities = 16/24 (66%), Positives = 17/24 (70%)
Query: 142 RLVSNFWPQVILPLQPPKVLELQL 165
RLV NF PQVI QPPKVL +L
Sbjct: 10 RLVLNFRPQVICLPQPPKVLGYRL 33
>gi|239751290 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 29.6 bits (65), Expect = 2.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 143 LVSNFWPQVILPLQPPKVLELQLLCL 168
LV N WPQ ILP PP+ + +L L
Sbjct: 2 LVLNSWPQAILPSWPPREQDYRLFLL 27
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 28.9 bits (63), Expect = 4.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 5 EPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQN-RWALWFFKN 50
EPET PP + +K+ES++E N ++ L+ W L+ + N
Sbjct: 939 EPETERVERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN 985
>gi|189095248 adiponectin receptor 1 [Homo sapiens]
Length = 375
Score = 28.5 bits (62), Expect = 5.7
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 13 NPPTTEEEKT-ESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVED 71
NPP EEE+T QE + PLQ A+ + K W+ R+I +D + D
Sbjct: 44 NPPKAEEEQTCPVPQEEEEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVI-PYDVLPD 102
Query: 72 FWALYNHIQLSSNLMP-----GCDYSLFK 95
W N L + P C S+F+
Sbjct: 103 -WLKDNDYLLHGHRPPMPSFRACFKSIFR 130
>gi|21361519 adiponectin receptor 1 [Homo sapiens]
Length = 375
Score = 28.5 bits (62), Expect = 5.7
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 13 NPPTTEEEKT-ESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVED 71
NPP EEE+T QE + PLQ A+ + K W+ R+I +D + D
Sbjct: 44 NPPKAEEEQTCPVPQEEEEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVI-PYDVLPD 102
Query: 72 FWALYNHIQLSSNLMP-----GCDYSLFK 95
W N L + P C S+F+
Sbjct: 103 -WLKDNDYLLHGHRPPMPSFRACFKSIFR 130
>gi|8922785 hypothetical protein LOC55267 [Homo sapiens]
Length = 138
Score = 28.5 bits (62), Expect = 5.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 143 LVSNFWPQVILPLQPPKVLELQL 165
LVSN W I +PP VLELQ+
Sbjct: 116 LVSNSWAHAIFLPRPPNVLELQV 138
>gi|31442761 amiloride-sensitive cation channel 5, intestinal
[Homo sapiens]
Length = 505
Score = 28.1 bits (61), Expect = 7.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 12 PNPPTTEEEKTESNQEVANPEHYIKHPLQNR-------WALWFFKNDKSKTWQANLRLIS 64
P P TE +K + + ++ H I + +QNR W + + TWQ +RL++
Sbjct: 27 PLPSPTERKKFDHDFAISTSFHGIHNIVQNRSKIRRVLWLVVVLGSVSLVTWQIYIRLLN 86
Query: 65 KF 66
F
Sbjct: 87 YF 88
>gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1
[Homo sapiens]
Length = 335
Score = 28.1 bits (61), Expect = 7.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 134 RWDLAMLPRLVSNFW-----PQVILPLQPPKVLE 162
+W +L L+ NFW QV++ QPPKV E
Sbjct: 14 KWKGLLLTALLLNFWNLPTTAQVMIEAQPPKVSE 47
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,961,380
Number of Sequences: 37866
Number of extensions: 483062
Number of successful extensions: 1915
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1869
Number of HSP's gapped (non-prelim): 53
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.