BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo sapiens] (161 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho... 340 2e-94 gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho... 340 2e-94 gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho... 299 8e-82 gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 58 3e-09 gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] 58 3e-09 gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 47 5e-06 gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 47 5e-06 gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 47 5e-06 gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 47 9e-06 gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 44 8e-05 gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 43 1e-04 gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 40 7e-04 gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 36 0.013 gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 36 0.013 gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 36 0.013 gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 36 0.016 gi|9966907 ARS component B precursor [Homo sapiens] 34 0.048 gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 31 0.53 gi|24041035 notch 2 preproprotein [Homo sapiens] 30 0.69 gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 30 0.69 gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 30 0.69 gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 30 0.69 gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 30 0.69 gi|54873613 agrin [Homo sapiens] 30 0.90 gi|239740999 PREDICTED: hypothetical protein [Homo sapiens] 30 0.90 gi|31563503 activity-dependent neuroprotector [Homo sapiens] 30 0.90 gi|12229217 activity-dependent neuroprotector [Homo sapiens] 30 0.90 gi|5032115 sprouty 2 [Homo sapiens] 30 1.2 gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] 30 1.2 gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] 30 1.2 >gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo sapiens] Length = 161 Score = 340 bits (873), Expect = 2e-94 Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 1 MLAPQRTRAPSPRAAPRPTRSMLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSH 60 MLAPQRTRAPSPRAAPRPTRSMLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSH Sbjct: 1 MLAPQRTRAPSPRAAPRPTRSMLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSH 60 Query: 61 CTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK 120 CTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK Sbjct: 61 CTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK 120 Query: 121 VDVDCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWAGP 161 VDVDCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWAGP Sbjct: 121 VDVDCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWAGP 161 >gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo sapiens] Length = 161 Score = 340 bits (873), Expect = 2e-94 Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 1 MLAPQRTRAPSPRAAPRPTRSMLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSH 60 MLAPQRTRAPSPRAAPRPTRSMLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSH Sbjct: 1 MLAPQRTRAPSPRAAPRPTRSMLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSH 60 Query: 61 CTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK 120 CTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK Sbjct: 61 CTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK 120 Query: 121 VDVDCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWAGP 161 VDVDCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWAGP Sbjct: 121 VDVDCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWAGP 161 >gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo sapiens] Length = 140 Score = 299 bits (765), Expect = 8e-82 Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 22 MLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDP 81 MLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDP Sbjct: 1 MLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDP 60 Query: 82 SSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSP 141 SSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSP Sbjct: 61 SSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSP 120 Query: 142 WALAGGLLLSLGPALLWAGP 161 WALAGGLLLSLGPALLWAGP Sbjct: 121 WALAGGLLLSLGPALLWAGP 140 >gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] Length = 131 Score = 58.2 bits (139), Expect = 3e-09 Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 16/134 (11%) Query: 34 LLAVLLCSAPAHGLWCQDCTLTTNSSHCT-PKQCQPSDTVCASVRITDPSSSRKD--HSV 90 LLA LL A L C C ++ +C P C D C +V + + HS+ Sbjct: 8 LLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNLVTFGHSL 67 Query: 91 NKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAG---HSPWALAGG 147 +K C+ +C + +N G+ + + CC+ LCN +A G S L G Sbjct: 68 SKTCSPACPIPEG----------VNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAG 117 Query: 148 LLLSLGPALLWAGP 161 LLLSL PALL GP Sbjct: 118 LLLSLLPALLRFGP 131 >gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] Length = 131 Score = 58.2 bits (139), Expect = 3e-09 Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 16/134 (11%) Query: 34 LLAVLLCSAPAHGLWCQDCTLTTNSSHCT-PKQCQPSDTVCASVRITDPSSSRKD--HSV 90 LLA LL A L C C ++ +C P C D C +V + + HS+ Sbjct: 8 LLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNLVTFGHSL 67 Query: 91 NKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAG---HSPWALAGG 147 +K C+ +C + +N G+ + + CC+ LCN +A G S L G Sbjct: 68 SKTCSPACPIPEG----------VNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAG 117 Query: 148 LLLSLGPALLWAGP 161 LLLSL PALL GP Sbjct: 118 LLLSLLPALLRFGP 131 >gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo sapiens] Length = 190 Score = 47.4 bits (111), Expect = 5e-06 Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 25/136 (18%) Query: 27 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPK-QCQPSDTVCASVRITDPSSSR 85 M+ L + LL +C+A A L C C HC +C P+D C R T P Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC---GHEHCESLVECAPTDKYCVITRATSPGGIL 57 Query: 86 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAG--HSPWA 143 V K C+ +C ++S + V CC+ CN +A AG SP Sbjct: 58 ----VMKSCSPTCP-----------NSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSP-- 100 Query: 144 LAGGLLLSLGPALLWA 159 G L S+ + LWA Sbjct: 101 --GTLWASIAASQLWA 114 >gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo sapiens] Length = 190 Score = 47.4 bits (111), Expect = 5e-06 Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 25/136 (18%) Query: 27 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPK-QCQPSDTVCASVRITDPSSSR 85 M+ L + LL +C+A A L C C HC +C P+D C R T P Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC---GHEHCESLVECAPTDKYCVITRATSPGGIL 57 Query: 86 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAG--HSPWA 143 V K C+ +C ++S + V CC+ CN +A AG SP Sbjct: 58 ----VMKSCSPTCP-----------NSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSP-- 100 Query: 144 LAGGLLLSLGPALLWA 159 G L S+ + LWA Sbjct: 101 --GTLWASIAASQLWA 114 >gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo sapiens] Length = 190 Score = 47.4 bits (111), Expect = 5e-06 Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 25/136 (18%) Query: 27 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPK-QCQPSDTVCASVRITDPSSSR 85 M+ L + LL +C+A A L C C HC +C P+D C R T P Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC---GHEHCESLVECAPTDKYCVITRATSPGGIL 57 Query: 86 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAG--HSPWA 143 V K C+ +C ++S + V CC+ CN +A AG SP Sbjct: 58 ----VMKSCSPTCP-----------NSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSP-- 100 Query: 144 LAGGLLLSLGPALLWA 159 G L S+ + LWA Sbjct: 101 --GTLWASIAASQLWA 114 >gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] Length = 128 Score = 46.6 bits (109), Expect = 9e-06 Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 15/126 (11%) Query: 32 LALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVN 91 L L A+ + + PA L C CT ++N H C S C + +P + + V Sbjct: 6 LLLAALAVATGPALTLRCHVCTSSSNCKHSV--VCPASSRFCKTTNTVEP---LRGNLVK 60 Query: 92 KMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAA-GAGHSPWALAGGLLL 150 K CA SC S L G ++SG CC++DLCN A + ALA L Sbjct: 61 KDCAESCT------PSYTLQGQVSSG--TSSTQCCQEDLCNEKLHNAAPTRTALAHS-AL 111 Query: 151 SLGPAL 156 SLG AL Sbjct: 112 SLGLAL 117 >gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] Length = 123 Score = 43.5 bits (101), Expect = 8e-05 Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 17/136 (12%) Query: 27 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTP-KQCQPSDTVCASVRITDPSSSR 85 MK + LALL L P L C C ++ C + C C + RI Sbjct: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60 Query: 86 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALA 145 ++K C+ +C + DY +G K ++ CC+ DLCN + P A Sbjct: 61 V---ISKGCSLNCVDDSQ----DYYVG-------KKNITCCDTDLCNASGAHALQPAAAI 106 Query: 146 GGLLLSLGPALLWAGP 161 LL +LG LLW GP Sbjct: 107 LALLPALG-LLLW-GP 120 >gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo sapiens] Length = 97 Score = 42.7 bits (99), Expect = 1e-04 Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 14/105 (13%) Query: 29 GLGLALLAVL-LCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKD 87 G GL L AVL L A A +WC CT SH +C T C + S++ Sbjct: 4 GTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSH--GSRCLRDSTHCVTTATRVLSNTEDL 61 Query: 88 HSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCN 132 V KMC C + Y V + CC+ LCN Sbjct: 62 PLVTKMCHIGCPDIPSLGLGPY-----------VSIACCQTSLCN 95 >gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] Length = 125 Score = 40.4 bits (93), Expect = 7e-04 Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 22/114 (19%) Query: 27 MKGLGLALLAVLL--CSAPAHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASV----RIT 79 M+G LALLA++L C A L C C T S C T C ++T+C + I Sbjct: 1 MRGTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIV 60 Query: 80 DPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK-VDVDCCEKDLCN 132 P D +V K CAS C SD GI + + V CC +LCN Sbjct: 61 YPFQG--DSTVTKSCASKCKP------SDV------DGIGQTLPVSCCNTELCN 100 >gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] Length = 116 Score = 36.2 bits (82), Expect = 0.013 Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%) Query: 32 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 89 L L+ V+L P A L C C N +C P +C C + R + K Sbjct: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59 Query: 90 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 149 V+K C C F G+ CC+ DLCNG A + ALA LL Sbjct: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109 Query: 150 LSL 152 +L Sbjct: 110 ATL 112 >gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] Length = 116 Score = 36.2 bits (82), Expect = 0.013 Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%) Query: 32 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 89 L L+ V+L P A L C C N +C P +C C + R + K Sbjct: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59 Query: 90 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 149 V+K C C F G+ CC+ DLCNG A + ALA LL Sbjct: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109 Query: 150 LSL 152 +L Sbjct: 110 ATL 112 >gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] Length = 116 Score = 36.2 bits (82), Expect = 0.013 Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%) Query: 32 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 89 L L+ V+L P A L C C N +C P +C C + R + K Sbjct: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59 Query: 90 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 149 V+K C C F G+ CC+ DLCNG A + ALA LL Sbjct: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109 Query: 150 LSL 152 +L Sbjct: 110 ATL 112 >gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] Length = 131 Score = 35.8 bits (81), Expect = 0.016 Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 13/92 (14%) Query: 41 SAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDF 100 ++ A +WC CT SH +C T C + S++ V KMC C Sbjct: 51 TSAAEAIWCHQCTGFGGCSH--GSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCPD 108 Query: 101 VKRHFFSDYLMGFINSGILKVDVDCCEKDLCN 132 + Y V + CC+ LCN Sbjct: 109 IPSLGLGPY-----------VSIACCQTSLCN 129 >gi|9966907 ARS component B precursor [Homo sapiens] Length = 103 Score = 34.3 bits (77), Expect = 0.048 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 14/89 (15%) Query: 47 LWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS--VNKMCASSCDFVKR 103 L C C S+ C T +C+P DT C + +T + + S V + C+SSC Sbjct: 23 LKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQSPVVTRSCSSSCVATDP 82 Query: 104 HFFSDYLMGFINSGILKVDVDCCEKDLCN 132 + F CC +DLCN Sbjct: 83 DSIGAAHLIF-----------CCFRDLCN 100 >gi|146219843 Snf2-related CBP activator protein [Homo sapiens] Length = 3230 Score = 30.8 bits (68), Expect = 0.53 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 10/81 (12%) Query: 3 APQRTRAPSPRAAPRPTRSMLPAAMKGL-GLALLAVLLCSAPAHGLWCQDCTLTTNSSHC 61 +P R R P P PRPT + PAA+ L + + A + SAP +T H Sbjct: 2430 SPARERVPRPAPRPRPTPASAPAAIPALVPVPVSAPVPISAPN--------PITILPVHI 2481 Query: 62 TPKQCQPSD-TVCASVRITDP 81 P PS C+S T P Sbjct: 2482 LPSPPPPSQIPPCSSPACTPP 2502 >gi|24041035 notch 2 preproprotein [Homo sapiens] Length = 2471 Score = 30.4 bits (67), Expect = 0.69 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Query: 23 LPAAMKGLGLALLAV-LLCSAPAHGLWCQD 51 +PA L ALLA+ L C+APAH L C+D Sbjct: 1 MPALRPALLWALLALWLCCAAPAHALQCRD 30 >gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens] Length = 4544 Score = 30.4 bits (67), Expect = 0.69 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 6/55 (10%) Query: 51 DCTLTTNSSHCTPKQCQPSDTVCASVRI------TDPSSSRKDHSVNKMCASSCD 99 DC ++ CTP+ C S+ CA+ R D D S K C CD Sbjct: 3560 DCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDCTPRCD 3614 Score = 28.1 bits (61), Expect = 3.4 Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 53 TLTTNSSHCTPKQCQPSDTVCASVR 77 T N S+ P QCQP + CA+ R Sbjct: 841 TCLANPSYVPPPQCQPGEFACANSR 865 >gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo sapiens] Length = 2134 Score = 30.4 bits (67), Expect = 0.69 Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 22/89 (24%) Query: 49 CQDCTLTTNSSHCTPKQCQPSDTVC-----ASVRITDPSSSRKDHSVNKMCASSCDFVKR 103 C +CT S CT +CQ T+C VR D K +S + +C S Sbjct: 1296 CNECTCIKGSWSCTQNECQ---TICHIYGEGHVRTFD----GKSYSFDGLCQYS------ 1342 Query: 104 HFFSDYLMGFINS--GILKVDVDCCEKDL 130 F DY G N IL V CCE L Sbjct: 1343 -FLEDY-CGHENGTFRILTESVPCCEDGL 1369 >gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo sapiens] Length = 2134 Score = 30.4 bits (67), Expect = 0.69 Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 22/89 (24%) Query: 49 CQDCTLTTNSSHCTPKQCQPSDTVC-----ASVRITDPSSSRKDHSVNKMCASSCDFVKR 103 C +CT S CT +CQ T+C VR D K +S + +C S Sbjct: 1296 CNECTCIKGSWSCTQNECQ---TICHIYGEGHVRTFD----GKSYSFDGLCQYS------ 1342 Query: 104 HFFSDYLMGFINS--GILKVDVDCCEKDL 130 F DY G N IL V CCE L Sbjct: 1343 -FLEDY-CGHENGTFRILTESVPCCEDGL 1369 >gi|126012573 low density lipoprotein-related protein 2 [Homo sapiens] Length = 4655 Score = 30.4 bits (67), Expect = 0.69 Identities = 13/30 (43%), Positives = 15/30 (50%) Query: 34 LLAVLLCSAPAHGLWCQDCTLTTNSSHCTP 63 LLA++ C APA G C S HC P Sbjct: 13 LLALVACLAPASGQECDSAHFRCGSGHCIP 42 Score = 30.0 bits (66), Expect = 0.90 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 50 QDCTLTTNSSH---CTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCD 99 QDC+ +T SSH C+ QC PS+ C VR + D +CD Sbjct: 101 QDCSQSTCSSHQITCSNGQCIPSEYRCDHVRDCPDGADENDCQYPTCEQLTCD 153 Score = 26.6 bits (57), Expect = 9.9 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 49 CQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDF-VKRHFFS 107 C+D + +SSHC + C+P CA+ R P + + D V+ C D ++ S Sbjct: 3619 CEDNS-DEDSSHCASRTCRPGQFRCANGRCI-PQAWKCD--VDNDCGDHSDEPIEECMSS 3674 Query: 108 DYLMGFINSGILKVDVDCCEK-DLCNG 133 +L K + C K +CNG Sbjct: 3675 AHLCDNFTEFSCKTNYRCIPKWAVCNG 3701 >gi|54873613 agrin [Homo sapiens] Length = 2045 Score = 30.0 bits (66), Expect = 0.90 Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 1/65 (1%) Query: 40 CSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCAS-SC 98 CS G DC T C P P C R P+ D S CA C Sbjct: 847 CSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRALGPAGCEADASAPATCAEMRC 906 Query: 99 DFVKR 103 +F R Sbjct: 907 EFGAR 911 >gi|239740999 PREDICTED: hypothetical protein [Homo sapiens] Length = 249 Score = 30.0 bits (66), Expect = 0.90 Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 12/74 (16%) Query: 10 PSPRAAPRPTRSMLPAAMK--------GLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHC 61 P+P P P R L L ALL +L C A LW C L T + C Sbjct: 171 PAPARDPAPRRGRLARCWARCRDWRRMALVSALLLMLFCVA----LWPVQCALKTGNLRC 226 Query: 62 TPKQCQPSDTVCAS 75 P +P T A+ Sbjct: 227 LPLPPRPPATSTAA 240 >gi|31563503 activity-dependent neuroprotector [Homo sapiens] Length = 1102 Score = 30.0 bits (66), Expect = 0.90 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query: 64 KQCQPSD-----TVCASVRITDPSSSR-KDHSVNKMCASSCDFVKRHFFSDYLMGFIN 115 KQ +P+D T V + DPS ++ +D+ C S+C F + FFS Y F N Sbjct: 39 KQFEPNDFYLKNTTWEDVGLWDPSLTKNQDYRTKPFCCSACPFSSK-FFSAYKSHFRN 95 >gi|12229217 activity-dependent neuroprotector [Homo sapiens] Length = 1102 Score = 30.0 bits (66), Expect = 0.90 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query: 64 KQCQPSD-----TVCASVRITDPSSSR-KDHSVNKMCASSCDFVKRHFFSDYLMGFIN 115 KQ +P+D T V + DPS ++ +D+ C S+C F + FFS Y F N Sbjct: 39 KQFEPNDFYLKNTTWEDVGLWDPSLTKNQDYRTKPFCCSACPFSSK-FFSAYKSHFRN 95 >gi|5032115 sprouty 2 [Homo sapiens] Length = 315 Score = 29.6 bits (65), Expect = 1.2 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 29 GLGLALLAVLLCSAPAHGLW--CQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRK 86 G+ L L C PA G CQ C N C +C+ S+TVC V P + K Sbjct: 257 GVMSLFLPCLWCYLPAKGCLKLCQGCYDRVNRPGC---RCKNSNTVCCKVPTVPPRNFEK 313 >gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] Length = 1184 Score = 29.6 bits (65), Expect = 1.2 Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 10/71 (14%) Query: 1 MLAPQRTRAPSPRAAPRPTRSMLPAAMKGLGLALLAVLLCSAPAH---------GLWCQD 51 ++ P+ R P P AAPR A + L L A L S P G CQ Sbjct: 559 LIVPEVRRPPEPAAAPRRVSEAEMAGREALSLGTEAELPNSLPGDDQDECLLLPGELCQH 618 Query: 52 -CTLTTNSSHC 61 C T S HC Sbjct: 619 LCINTVGSYHC 629 >gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] Length = 1231 Score = 29.6 bits (65), Expect = 1.2 Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 10/71 (14%) Query: 1 MLAPQRTRAPSPRAAPRPTRSMLPAAMKGLGLALLAVLLCSAPAH---------GLWCQD 51 ++ P+ R P P AAPR A + L L A L S P G CQ Sbjct: 559 LIVPEVRRPPEPAAAPRRVSEAEMAGREALSLGTEAELPNSLPGDDQDECLLLPGELCQH 618 Query: 52 -CTLTTNSSHC 61 C T S HC Sbjct: 619 LCINTVGSYHC 629 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.134 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,314,676 Number of Sequences: 37866 Number of extensions: 353699 Number of successful extensions: 1732 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 39 Number of HSP's that attempted gapping in prelim test: 1622 Number of HSP's gapped (non-prelim): 137 length of query: 161 length of database: 18,247,518 effective HSP length: 94 effective length of query: 67 effective length of database: 14,688,114 effective search space: 984103638 effective search space used: 984103638 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.