Guide to the Human Genome
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Name: KIAA1609 Sequence: fasta or formatted (456aa) NCBI GI: 205360930
Description:

hypothetical protein LOC57707

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         24           2
 C cysteine            2.4         11           1
 D aspartate           5.9         27           2
 E glutamate           6.6         30           2
 F phenylalanine       4.6         21           1
 G glycine             7.9         36           2
 H histidine           4.2         19           1
 I isoleucine          3.1         14           1
 K lysine              4.6         21           1
 L leucine             9.9         45           2
 M methionine          2.9         13           1
 N asparagine          3.5         16           1
 P proline             4.8         22           2
 Q glutamine           5.9         27           2
 R arginine            5.0         23           2
 S serine              9.2         42           2
 T threonine           3.3         15           2
 V valine              7.5         34           2
 W tryptophan          1.5          7           1
 Y tyrosine            2.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57707 
C20orf118             0.062   hypothetical protein LOC140711 
NCOA7                 0.059   nuclear receptor coactivator 7 isoform 2 
NCOA7                 0.059   nuclear receptor coactivator 7 isoform 1 
OXR1                  0.058   oxidation resistance 1 isoform 2 
OXR1                  0.058   oxidation resistance 1 isoform 1 
TBC1D24               0.021   TBC1 domain family, member 24 
LOC100291673          0.005   PREDICTED: hypothetical protein XP_002344645 
LOC100289289          0.005   PREDICTED: hypothetical protein XP_002343409 
MTMR8                 0.005   myotubularin related protein 8 
ERAP1                 0.005   type 1 tumor necrosis factor receptor shedding amino...
ERAP1                 0.005   type 1 tumor necrosis factor receptor shedding amino...
LOC100289881          0.005   PREDICTED: hypothetical protein XP_002347282 
LOC100288668          0.005   PREDICTED: hypothetical protein XP_002343144 
DOCK8                 0.004   dedicator of cytokinesis 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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