Guide to the Human Genome
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Search of human proteins with 113412994

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113412994 PREDICTED: hypothetical protein [Homo sapiens]
         (224 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169164040 PREDICTED: hypothetical protein [Homo sapiens]           462   e-131
gi|113413839 PREDICTED: hypothetical protein [Homo sapiens]           462   e-131
gi|113412994 PREDICTED: hypothetical protein [Homo sapiens]           462   e-131
gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo ...    36   0.030
gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo ...    36   0.030
gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo ...    36   0.030
gi|205360905 testis-specific serine protease 1 [Homo sapiens]          36   0.030
gi|54607124 RNA binding motif protein 15B [Homo sapiens]               35   0.040
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]            35   0.052
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]            35   0.052
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]            35   0.052
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]            35   0.052
gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo sap...    34   0.12 
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]            34   0.12 
gi|239755024 PREDICTED: hypothetical protein [Homo sapiens]            34   0.12 
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]            34   0.12 
gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo sap...    34   0.12 
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ...    34   0.12 
gi|239749542 PREDICTED: hypothetical protein [Homo sapiens]            34   0.12 
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ...    34   0.12 
gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo sap...    34   0.12 
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ...    34   0.12 
gi|239743694 PREDICTED: hypothetical protein XP_002342927 [Homo ...    34   0.12 
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ...    34   0.12 
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|13775236 scratch [Homo sapiens]                                     33   0.20 

>gi|169164040 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  462 bits (1190), Expect = e-131
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG 60
           MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG
Sbjct: 1   MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG 60

Query: 61  AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI 120
           AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI
Sbjct: 61  AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI 120

Query: 121 NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG 180
           NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG
Sbjct: 121 NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG 180

Query: 181 GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI 224
           GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI
Sbjct: 181 GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI 224


>gi|113413839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  462 bits (1190), Expect = e-131
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG 60
           MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG
Sbjct: 1   MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG 60

Query: 61  AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI 120
           AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI
Sbjct: 61  AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI 120

Query: 121 NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG 180
           NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG
Sbjct: 121 NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG 180

Query: 181 GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI 224
           GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI
Sbjct: 181 GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI 224


>gi|113412994 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  462 bits (1190), Expect = e-131
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG 60
           MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG
Sbjct: 1   MCPQRLFTNTKLFMIVGKRNPARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRG 60

Query: 61  AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI 120
           AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI
Sbjct: 61  AARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKI 120

Query: 121 NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG 180
           NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG
Sbjct: 121 NYQIIDQQGASICGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGLNPHPQG 180

Query: 181 GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI 224
           GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI
Sbjct: 181 GVASGVLRQRGNGAWIYHNSAATFSNLEKMRKEGSGDLCEKGPI 224


>gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo
           sapiens]
          Length = 323

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 46/162 (28%), Positives = 64/162 (39%), Gaps = 32/162 (19%)

Query: 22  ARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCL 81
           A+AR++  + G  GA          +P+R   A R  R   RR  AG             
Sbjct: 115 AQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGA----------GW 164

Query: 82  RGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGK---------INYQIIDQQGASI 132
           RG  GL P   PG   WR+ R  RR   PGR  L+ GK         ++  +   + A +
Sbjct: 165 RGGPGLGPVRPPG---WRAGRRTRRTAGPGR--LSFGKTLAVPPLVSVDPAVAFSRAADL 219

Query: 133 CGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGL 174
           C     P   PA+   K    S+   R   AP+ +  AS G+
Sbjct: 220 C-----PPVAPAVLEQKGPPSSRTEPR---APSPMEQASAGV 253


>gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo
           sapiens]
          Length = 323

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 46/162 (28%), Positives = 64/162 (39%), Gaps = 32/162 (19%)

Query: 22  ARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCL 81
           A+AR++  + G  GA          +P+R   A R  R   RR  AG             
Sbjct: 115 AQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGA----------GW 164

Query: 82  RGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGK---------INYQIIDQQGASI 132
           RG  GL P   PG   WR+ R  RR   PGR  L+ GK         ++  +   + A +
Sbjct: 165 RGGPGLGPVRPPG---WRAGRRTRRTAGPGR--LSFGKTLAVPPLVSVDPAVAFSRAADL 219

Query: 133 CGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGL 174
           C     P   PA+   K    S+   R   AP+ +  AS G+
Sbjct: 220 C-----PPVAPAVLEQKGPPSSRTEPR---APSPMEQASAGV 253


>gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo
           sapiens]
          Length = 323

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 46/162 (28%), Positives = 64/162 (39%), Gaps = 32/162 (19%)

Query: 22  ARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCL 81
           A+AR++  + G  GA          +P+R   A R  R   RR  AG             
Sbjct: 115 AQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGA----------GW 164

Query: 82  RGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGK---------INYQIIDQQGASI 132
           RG  GL P   PG   WR+ R  RR   PGR  L+ GK         ++  +   + A +
Sbjct: 165 RGGPGLGPVRPPG---WRAGRRTRRTAGPGR--LSFGKTLAVPPLVSVDPAVAFSRAADL 219

Query: 133 CGECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASCGL 174
           C     P   PA+   K    S+   R   AP+ +  AS G+
Sbjct: 220 C-----PPVAPAVLEQKGPPSSRTEPR---APSPMEQASAGV 253


>gi|205360905 testis-specific serine protease 1 [Homo sapiens]
          Length = 318

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 12/87 (13%)

Query: 30  LAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCLRGAEGLQP 89
           L   AG G+P  G L         A++ G GAARR   G     C HR +    A G++ 
Sbjct: 12  LLARAGLGKP--GEL--------GALQAGPGAARRPGGGGREEACGHREIHALVAGGVE- 60

Query: 90  RPLPGLQPWRSARPIRRRPRPGRRALA 116
               G  PW+++  +RRR R G   L+
Sbjct: 61  -SARGRWPWQASLRLRRRHRCGGSLLS 86


>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
          Length = 890

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 21  PARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLC 80
           PARAR  P  +G  G G         R  RG         + R   +G  G G   +   
Sbjct: 50  PARARDKPRGSGSGGGGH--------RDGRGTGDANHRASSGRSSGSGAGGGGRGGKASG 101

Query: 81  LRGAEGLQPR--PLPGLQPWRSARP 103
             GA G+ PR  PLP   P   A P
Sbjct: 102 DPGASGMSPRASPLPPPPPPPGAEP 126


>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1128

 Score = 35.0 bits (79), Expect = 0.052
 Identities = 27/62 (43%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 31  AGGAGAGEPLGGRLFLRPARGEAAV--RPGRGAARRDAAGVLGSGCSHRCLCLRGAEGLQ 88
           AGG G GE  GG    R   G AAV    G GAA R A  V G G   R     GA+   
Sbjct: 436 AGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERR--VAEGAQQFG 493

Query: 89  PR 90
           PR
Sbjct: 494 PR 495


>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 35.0 bits (79), Expect = 0.052
 Identities = 27/62 (43%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 31  AGGAGAGEPLGGRLFLRPARGEAAV--RPGRGAARRDAAGVLGSGCSHRCLCLRGAEGLQ 88
           AGG G GE  GG    R   G AAV    G GAA R A  V G G   R     GA+   
Sbjct: 109 AGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERR--VAEGAQQFG 166

Query: 89  PR 90
           PR
Sbjct: 167 PR 168


>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 35.0 bits (79), Expect = 0.052
 Identities = 27/62 (43%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 31  AGGAGAGEPLGGRLFLRPARGEAAV--RPGRGAARRDAAGVLGSGCSHRCLCLRGAEGLQ 88
           AGG G GE  GG    R   G AAV    G GAA R A  V G G   R     GA+   
Sbjct: 109 AGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERR--VAEGAQQFG 166

Query: 89  PR 90
           PR
Sbjct: 167 PR 168


>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 35.0 bits (79), Expect = 0.052
 Identities = 27/62 (43%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 31  AGGAGAGEPLGGRLFLRPARGEAAV--RPGRGAARRDAAGVLGSGCSHRCLCLRGAEGLQ 88
           AGG G GE  GG    R   G AAV    G GAA R A  V G G   R     GA+   
Sbjct: 109 AGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERR--VAEGAQQFG 166

Query: 89  PR 90
           PR
Sbjct: 167 PR 168


>gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo
           sapiens]
          Length = 338

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 19/158 (12%)

Query: 21  PARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLC 80
           P  A++SPD   G+G+   +   + +R   G         AA +    V  S        
Sbjct: 33  PQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARRTVPPS-------- 84

Query: 81  LRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKINYQI------IDQQGASICG 134
           L G+  L P P      WR+   +R+    G  A  AG + + +      +DQ G +   
Sbjct: 85  LAGSFSLPPTPDSRFADWRTTGGVRK--AAGLGASVAGYLEHNLRAHQLEMDQLGTT--P 140

Query: 135 ECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASC 172
            C      P L++   L P   PA AS  P  V    C
Sbjct: 141 PCNHAAGTPPLRLIHSL-PHAPPASASAQPQSVRRQLC 177


>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 316

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 11/70 (15%)

Query: 18  KRNPARAR----SSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSG 73
           +R P RA+    SSP L GG  AG  +  R   R  RG      G GAA   AAG  G+G
Sbjct: 45  RRAPLRAKRTVLSSPSLGGGPAAGSAI-LRAGSRSPRG-----AGPGAAGPRAAGRGGAG 98

Query: 74  CSHRCLCLRG 83
              RC C RG
Sbjct: 99  GGGRC-CTRG 107


>gi|239755024 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 136

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 16 VGKRNPARARSSPDLAGGAGAGEPLGGR----LFLRP--ARGEAAVRPGRGAARR 64
          VG+R P  AR S   AG  G GEP GGR    L L+P   R    + P R AA R
Sbjct: 44 VGRRLPIHARDSA--AGARGLGEPTGGRASAWLQLQPPSLRSSPLMHPARRAAGR 96


>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 370

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 14  MIVGKRNPARARSSPDLAG----GAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGV 69
           +IVG+R     R    L G    GAGA +P   RL  +P    A ++ G GA RR  A +
Sbjct: 69  VIVGRRRACPGRGRGGLPGAAALGAGAQQPRRRRL-AQPPGSRAPLQVG-GAPRR-RAHL 125

Query: 70  LGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRR 107
            G     R   L  A GL     PGL+P  +   +R R
Sbjct: 126 TGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLR 163


>gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo
           sapiens]
          Length = 338

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 19/158 (12%)

Query: 21  PARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLC 80
           P  A++SPD   G+G+   +   + +R   G         AA +    V  S        
Sbjct: 33  PQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARRTVPPS-------- 84

Query: 81  LRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKINYQI------IDQQGASICG 134
           L G+  L P P      WR+   +R+    G  A  AG + + +      +DQ G +   
Sbjct: 85  LAGSFSLPPTPDSRFADWRTTGGVRK--AAGLGASVAGYLEHNLRAHQLEMDQLGTT--P 140

Query: 135 ECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASC 172
            C      P L++   L P   PA AS  P  V    C
Sbjct: 141 PCNHAAGTPPLRLIHSL-PHAPPASASAQPQSVRRQLC 177


>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
           sapiens]
          Length = 304

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 11/70 (15%)

Query: 18  KRNPARAR----SSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSG 73
           +R P RA+    SSP L GG  AG  +  R   R  RG      G GAA   AAG  G+G
Sbjct: 45  RRAPLRAKRTVLSSPSLGGGPAAGSAI-LRAGSRSPRG-----AGPGAAGPRAAGRGGAG 98

Query: 74  CSHRCLCLRG 83
              RC C RG
Sbjct: 99  GGGRC-CTRG 107


>gi|239749542 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 136

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 16 VGKRNPARARSSPDLAGGAGAGEPLGGR----LFLRP--ARGEAAVRPGRGAARR 64
          VG+R P  AR S   AG  G GEP GGR    L L+P   R    + P R AA R
Sbjct: 44 VGRRLPIHARDSA--AGARGPGEPTGGRASAWLQLQPPSLRSSPLMHPARRAAGR 96


>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
           sapiens]
          Length = 470

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 14  MIVGKRNPARARSSPDLAG----GAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGV 69
           +IVG+R     R    L G    GAGA +P   RL  +P    A ++ G GA RR  A +
Sbjct: 69  VIVGRRRACPGRGRGGLPGAAALGAGAQQPRRRRL-AQPPGSRAPLQVG-GAPRR-RAHL 125

Query: 70  LGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRR 107
            G     R   L  A GL     PGL+P  +   +R R
Sbjct: 126 TGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLR 163


>gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo
           sapiens]
          Length = 338

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 19/158 (12%)

Query: 21  PARARSSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLC 80
           P  A++SPD   G+G+   +   + +R   G         AA +    V  S        
Sbjct: 33  PQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARRTVPPS-------- 84

Query: 81  LRGAEGLQPRPLPGLQPWRSARPIRRRPRPGRRALAAGKINYQI------IDQQGASICG 134
           L G+  L P P      WR+   +R+    G  A  AG + + +      +DQ G +   
Sbjct: 85  LAGSFSLPPTPDSRFADWRTTGGVRK--AAGLGASVAGYLEHNLRAHQLEMDQLGTT--P 140

Query: 135 ECELPVPIPALKVAKRLTPSKQPARASIAPTHVPLASC 172
            C      P L++   L P   PA AS  P  V    C
Sbjct: 141 PCNHAAGTPPLRLIHSL-PHAPPASASAQPQSVRRQLC 177


>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
           sapiens]
          Length = 304

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 11/70 (15%)

Query: 18  KRNPARAR----SSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSG 73
           +R P RA+    SSP L GG  AG  +  R   R  RG      G GAA   AAG  G+G
Sbjct: 45  RRAPLRAKRTVLSSPSLGGGPAAGSAI-LRAGSRSPRG-----AGPGAAGPRAAGRGGAG 98

Query: 74  CSHRCLCLRG 83
              RC C RG
Sbjct: 99  GGGRC-CTRG 107


>gi|239743694 PREDICTED: hypothetical protein XP_002342927 [Homo
          sapiens]
          Length = 136

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 16 VGKRNPARARSSPDLAGGAGAGEPLGGR----LFLRP--ARGEAAVRPGRGAARR 64
          VG+R P  AR S   AG  G GEP GGR    L L+P   R    + P R AA R
Sbjct: 44 VGRRLPIHARDSA--AGARGPGEPTGGRASAWLQLQPPSLRSSPLMHPARRAAGR 96


>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
           sapiens]
          Length = 470

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 14  MIVGKRNPARARSSPDLAG----GAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGV 69
           +IVG+R     R    L G    GAGA +P   RL  +P    A ++ G GA RR  A +
Sbjct: 69  VIVGRRRACPGRGRGGLPGAAALGAGAQQPRRRRL-AQPPGSRAPLQVG-GAPRR-RAHL 125

Query: 70  LGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSARPIRRR 107
            G     R   L  A GL     PGL+P  +   +R R
Sbjct: 126 TGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLR 163


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 18/108 (16%)

Query: 28  PDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCL-RGAEG 86
           P +A GA  G  L   + L         R GRGA R +AA     G  H+ + + RG  G
Sbjct: 670 PQVAAGAPVGADLDVSVVLWVGVVGHLGR-GRGAGRAEAARAAREGGPHQGVFIQRGRGG 728

Query: 87  LQPRPLPGLQPWRS------ARP-------IRRRPRPGRRALAAGKIN 121
           L  RPLPG   WR       A+P       + R P  G   +A G ++
Sbjct: 729 LGHRPLPG---WRGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVH 773


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 18/108 (16%)

Query: 28  PDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCL-RGAEG 86
           P +A GA  G  L   + L         R GRGA R +AA     G  H+ + + RG  G
Sbjct: 670 PQVAAGAPVGADLDVSVVLWVGVVGHLGR-GRGAGRAEAARAAREGGPHQGVFIQRGRGG 728

Query: 87  LQPRPLPGLQPWRS------ARP-------IRRRPRPGRRALAAGKIN 121
           L  RPLPG   WR       A+P       + R P  G   +A G ++
Sbjct: 729 LGHRPLPG---WRGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVH 773


>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 221

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 30/87 (34%), Positives = 34/87 (39%), Gaps = 12/87 (13%)

Query: 30  LAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCLRGAEGLQP 89
           LA G G   P  GR+    AR     R G GA  R A G  G   +      RG  G + 
Sbjct: 38  LATGKGQRPPGPGRVRAAQARA----RRGGGARERPAEGARGPRAA------RG--GARA 85

Query: 90  RPLPGLQPWRSARPIRRRPRPGRRALA 116
            P+P   P     P  RRP    R LA
Sbjct: 86  APMPSSAPRGPTEPALRRPSSAERPLA 112


>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 49  ARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSAR-PIRRR 107
           ARG    + G G+  R A  + G       L    A   +  P PGL   R+ R  I+  
Sbjct: 735 ARGSFLPKSGGGSPPRPARSLAGPSRDDEPL----AGAPEEWPPPGLSSRRAPRFLIKSS 790

Query: 108 PRPGRRALAAGKINY 122
           P PGRRALAA   N+
Sbjct: 791 PAPGRRALAARAANH 805


>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 49  ARGEAAVRPGRGAARRDAAGVLGSGCSHRCLCLRGAEGLQPRPLPGLQPWRSAR-PIRRR 107
           ARG    + G G+  R A  + G       L    A   +  P PGL   R+ R  I+  
Sbjct: 735 ARGSFLPKSGGGSPPRPARSLAGPSRDDEPL----AGAPEEWPPPGLSSRRAPRFLIKSS 790

Query: 108 PRPGRRALAAGKINY 122
           P PGRRALAA   N+
Sbjct: 791 PAPGRRALAARAANH 805


>gi|13775236 scratch [Homo sapiens]
          Length = 348

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 26  SSPDLAGGAGAGEPLGGRLFLRPARGEAAVRPGRGAARRDAAGVLGSGCSHRC 78
           ++PD  G AG G   GGR       G    R G G   R   G  G+G  H C
Sbjct: 143 AAPD--GDAGGGGGAGGRSLGSGPGGRGGTRAGAGTEARAGPGAAGAGGRHAC 193


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,644,159
Number of Sequences: 37866
Number of extensions: 615756
Number of successful extensions: 2609
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 2502
Number of HSP's gapped (non-prelim): 207
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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