Guide to the Human Genome
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Name: LVRN Sequence: fasta or formatted (990aa) NCBI GI: 194239713
Description:

laeverin

Referenced in:

Aminopeptidases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         60           2
 C cysteine            1.0         10           1
 D aspartate           5.1         50           2
 E glutamate           6.7         66           2
 F phenylalanine       4.2         42           2
 G glycine             3.8         38           1
 H histidine           2.1         21           2
 I isoleucine          6.3         62           2
 K lysine              4.8         48           2
 L leucine            12.6        125           3
 M methionine          1.9         19           1
 N asparagine          6.0         59           2
 P proline             5.4         53           2
 Q glutamine           3.2         32           2
 R arginine            4.3         43           2
 S serine              7.2         71           3
 T threonine           6.4         63           3
 V valine              6.5         64           2
 W tryptophan          2.7         27           2
 Y tyrosine            3.7         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   laeverin 
ANPEP                 0.280   membrane alanine aminopeptidase precursor 
TRHDE                 0.226   thyrotropin-releasing hormone degrading enzyme 
ENPEP                 0.205   glutamyl aminopeptidase 
ERAP1                 0.188   type 1 tumor necrosis factor receptor shedding amino...
ERAP1                 0.188   type 1 tumor necrosis factor receptor shedding amino...
ERAP2                 0.177   endoplasmic reticulum aminopeptidase 2 
ERAP2                 0.177   endoplasmic reticulum aminopeptidase 2 
LNPEP                 0.175   leucyl/cystinyl aminopeptidase isoform 1 
LNPEP                 0.175   leucyl/cystinyl aminopeptidase isoform 2 
NPEPPS                0.139   aminopeptidase puromycin sensitive 
LTA4H                 0.038   leukotriene A4 hydrolase 
RNPEP                 0.029   arginyl aminopeptidase 
RNPEPL1               0.023   arginyl aminopeptidase (aminopeptidase B)-like 1 [Ho...
CNTNAP1               0.008   contactin associated protein 1 precursor 
PVRL1                 0.007   poliovirus receptor-related 1 isoform 2 
TEX11                 0.006   testis expressed sequence 11 isoform 2 
TEX11                 0.006   testis expressed sequence 11 isoform 1 
LOC729580             0.005   PREDICTED: hypothetical protein 
LOC729580             0.005   PREDICTED: hypothetical protein 
LOC729580             0.005   PREDICTED: hypothetical protein 
RGS3                  0.005   regulator of G-protein signalling 3 isoform 6 [Homo...
RGS3                  0.005   regulator of G-protein signalling 3 isoform 2 
RGS3                  0.005   regulator of G-protein signalling 3 isoform 1 
TNFRSF25              0.005   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.005   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.005   tumor necrosis factor receptor superfamily, member 25...
MLNR                  0.005   motilin receptor 
GLT8D4                0.005   glycosyltransferase 8 domain containing 4 
CHERP                 0.004   calcium homeostasis endoplasmic reticulum protein [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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