Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ERAP1 Sequence: fasta or formatted (948aa) NCBI GI: 94818901
Description:

type 1 tumor necrosis factor receptor shedding aminopeptidase regulator isoform a

Referenced in:

Aminopeptidases

Other entries for this name:
alt prot [941aa] type 1 tumor necrosis factor receptor shedding aminopeptidase reg...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         56           2
 C cysteine            1.1         10           1
 D aspartate           5.0         47           2
 E glutamate           7.0         66           2
 F phenylalanine       5.2         49           2
 G glycine             5.2         49           1
 H histidine           3.0         28           2
 I isoleucine          5.0         47           2
 K lysine              6.3         60           1
 L leucine            10.8        102           4
 M methionine          3.0         28           2
 N asparagine          3.6         34           2
 P proline             4.2         40           1
 Q glutamine           4.1         39           2
 R arginine            3.6         34           2
 S serine              8.6         82           5
 T threonine           6.8         64           2
 V valine              6.3         60           2
 W tryptophan          2.4         23           2
 Y tyrosine            3.2         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   type 1 tumor necrosis factor receptor shedding amino... 
ERAP1                 0.989   type 1 tumor necrosis factor receptor shedding amino...
ERAP2                 0.497   endoplasmic reticulum aminopeptidase 2 
ERAP2                 0.497   endoplasmic reticulum aminopeptidase 2 
LNPEP                 0.414   leucyl/cystinyl aminopeptidase isoform 1 
LNPEP                 0.414   leucyl/cystinyl aminopeptidase isoform 2 
ENPEP                 0.261   glutamyl aminopeptidase 
ANPEP                 0.248   membrane alanine aminopeptidase precursor 
TRHDE                 0.239   thyrotropin-releasing hormone degrading enzyme 
NPEPPS                0.215   aminopeptidase puromycin sensitive 
LVRN                  0.196   laeverin 
RNPEP                 0.037   arginyl aminopeptidase 
LTA4H                 0.034   leukotriene A4 hydrolase 
RNPEPL1               0.030   arginyl aminopeptidase (aminopeptidase B)-like 1 [Ho...
TAF2                  0.009   TBP-associated factor 2 
TARBP1                0.004   TAR RNA binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press