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Search of human proteins with 194018535
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194018535 Gen homolog 1, endonuclease [Homo sapiens]
(908 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194018535 Gen homolog 1, endonuclease [Homo sapiens] 1855 0.0
gi|194018531 Gen homolog 1, endonuclease [Homo sapiens] 1855 0.0
gi|4758356 flap structure-specific endonuclease 1 [Homo sapiens] 103 6e-22
gi|51988900 XPG-complementing protein [Homo sapiens] 93 1e-18
gi|39995071 exonuclease 1 isoform b [Homo sapiens] 59 3e-08
gi|39995069 exonuclease 1 isoform a [Homo sapiens] 59 3e-08
gi|18491016 exonuclease 1 isoform b [Homo sapiens] 59 3e-08
gi|83367077 mucin 16 [Homo sapiens] 44 7e-04
gi|149944526 additional sex combs like 3 [Homo sapiens] 40 0.008
gi|75677612 leucine rich repeat containing 37, member A3 [Homo s... 36 0.14
gi|119395736 insulin receptor isoform Long precursor [Homo sapiens] 35 0.24
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 35 0.32
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 35 0.41
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro... 34 0.54
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro... 34 0.54
gi|110665701 leucine rich repeat containing 37A [Homo sapiens] 34 0.54
gi|239745855 PREDICTED: hypothetical protein XP_002343606 [Homo ... 34 0.71
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens] 34 0.71
gi|54633315 deoxynucleotidyltransferase, terminal, interacting p... 33 0.92
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens] 33 0.92
gi|58533172 zinc finger, matrin type 1 isoform 3 [Homo sapiens] 33 0.92
gi|201862060 tripartite motif-containing 48 [Homo sapiens] 33 0.92
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 33 1.2
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 33 1.2
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 33 1.2
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 33 1.2
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 33 1.2
gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo ... 33 1.6
gi|27886520 nuclear factor of activated T-cells 5 isoform a [Hom... 33 1.6
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo... 33 1.6
>gi|194018535 Gen homolog 1, endonuclease [Homo sapiens]
Length = 908
Score = 1855 bits (4804), Expect = 0.0
Identities = 908/908 (100%), Positives = 908/908 (100%)
Query: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
Query: 61 SYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHM 120
SYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHM
Sbjct: 61 SYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHM 120
Query: 121 LECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVD 180
LECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVD
Sbjct: 121 LECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVD 180
Query: 181 CYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSLLQRFNR 240
CYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSLLQRFNR
Sbjct: 181 CYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSLLQRFNR 240
Query: 241 WNETSCNSSPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLCKSDKYCEPHDYEYCCPCEW 300
WNETSCNSSPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLCKSDKYCEPHDYEYCCPCEW
Sbjct: 241 WNETSCNSSPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLCKSDKYCEPHDYEYCCPCEW 300
Query: 301 HRTEHDRQLSEVENNIKKKACCCEGFPFHEVIQEFLLNKDKLVKVIRYQRPDLLLFQRFT 360
HRTEHDRQLSEVENNIKKKACCCEGFPFHEVIQEFLLNKDKLVKVIRYQRPDLLLFQRFT
Sbjct: 301 HRTEHDRQLSEVENNIKKKACCCEGFPFHEVIQEFLLNKDKLVKVIRYQRPDLLLFQRFT 360
Query: 361 LEKMEWPNHYACEKLLVLLTHYDMIERKLGSRNSNQLQPIRIVKTRIRNGVHCFEIEWEK 420
LEKMEWPNHYACEKLLVLLTHYDMIERKLGSRNSNQLQPIRIVKTRIRNGVHCFEIEWEK
Sbjct: 361 LEKMEWPNHYACEKLLVLLTHYDMIERKLGSRNSNQLQPIRIVKTRIRNGVHCFEIEWEK 420
Query: 421 PEHYAMEDKQHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNLPE 480
PEHYAMEDKQHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNLPE
Sbjct: 421 PEHYAMEDKQHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNLPE 480
Query: 481 PDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCLNA 540
PDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCLNA
Sbjct: 481 PDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCLNA 540
Query: 541 QEQFMSSLRPLAIQQIKAVSKSLISESSQPNTSSHNISVIADLHLSTIDWEGTSFSNSPA 600
QEQFMSSLRPLAIQQIKAVSKSLISESSQPNTSSHNISVIADLHLSTIDWEGTSFSNSPA
Sbjct: 541 QEQFMSSLRPLAIQQIKAVSKSLISESSQPNTSSHNISVIADLHLSTIDWEGTSFSNSPA 600
Query: 601 IQRNTFSHDLKSEVESELSAIPDGFENIPEQLSCESERYTANIKKVLDEDSDGISPEEHL 660
IQRNTFSHDLKSEVESELSAIPDGFENIPEQLSCESERYTANIKKVLDEDSDGISPEEHL
Sbjct: 601 IQRNTFSHDLKSEVESELSAIPDGFENIPEQLSCESERYTANIKKVLDEDSDGISPEEHL 660
Query: 661 LSGITDLCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSILSVKESCIANSGSDCTSHLS 720
LSGITDLCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSILSVKESCIANSGSDCTSHLS
Sbjct: 661 LSGITDLCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSILSVKESCIANSGSDCTSHLS 720
Query: 721 KDLPGIPLQNESRDSKILKGDQLLQEDYKVNTSVPYSVSNTVVKTCNVRPPNTALDHSRK 780
KDLPGIPLQNESRDSKILKGDQLLQEDYKVNTSVPYSVSNTVVKTCNVRPPNTALDHSRK
Sbjct: 721 KDLPGIPLQNESRDSKILKGDQLLQEDYKVNTSVPYSVSNTVVKTCNVRPPNTALDHSRK 780
Query: 781 VDMQTTRKILMKKSVCLDRHSSDEQSAPVFGKAKYTTQRMKHSSQKHNSSHFKESGHNKL 840
VDMQTTRKILMKKSVCLDRHSSDEQSAPVFGKAKYTTQRMKHSSQKHNSSHFKESGHNKL
Sbjct: 781 VDMQTTRKILMKKSVCLDRHSSDEQSAPVFGKAKYTTQRMKHSSQKHNSSHFKESGHNKL 840
Query: 841 SSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLSSLQCHKKENNSGTCLDSPLPLRQR 900
SSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLSSLQCHKKENNSGTCLDSPLPLRQR
Sbjct: 841 SSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLSSLQCHKKENNSGTCLDSPLPLRQR 900
Query: 901 LKLRFQST 908
LKLRFQST
Sbjct: 901 LKLRFQST 908
>gi|194018531 Gen homolog 1, endonuclease [Homo sapiens]
Length = 908
Score = 1855 bits (4804), Expect = 0.0
Identities = 908/908 (100%), Positives = 908/908 (100%)
Query: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
Query: 61 SYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHM 120
SYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHM
Sbjct: 61 SYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHM 120
Query: 121 LECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVD 180
LECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVD
Sbjct: 121 LECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVD 180
Query: 181 CYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSLLQRFNR 240
CYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSLLQRFNR
Sbjct: 181 CYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSLLQRFNR 240
Query: 241 WNETSCNSSPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLCKSDKYCEPHDYEYCCPCEW 300
WNETSCNSSPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLCKSDKYCEPHDYEYCCPCEW
Sbjct: 241 WNETSCNSSPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLCKSDKYCEPHDYEYCCPCEW 300
Query: 301 HRTEHDRQLSEVENNIKKKACCCEGFPFHEVIQEFLLNKDKLVKVIRYQRPDLLLFQRFT 360
HRTEHDRQLSEVENNIKKKACCCEGFPFHEVIQEFLLNKDKLVKVIRYQRPDLLLFQRFT
Sbjct: 301 HRTEHDRQLSEVENNIKKKACCCEGFPFHEVIQEFLLNKDKLVKVIRYQRPDLLLFQRFT 360
Query: 361 LEKMEWPNHYACEKLLVLLTHYDMIERKLGSRNSNQLQPIRIVKTRIRNGVHCFEIEWEK 420
LEKMEWPNHYACEKLLVLLTHYDMIERKLGSRNSNQLQPIRIVKTRIRNGVHCFEIEWEK
Sbjct: 361 LEKMEWPNHYACEKLLVLLTHYDMIERKLGSRNSNQLQPIRIVKTRIRNGVHCFEIEWEK 420
Query: 421 PEHYAMEDKQHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNLPE 480
PEHYAMEDKQHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNLPE
Sbjct: 421 PEHYAMEDKQHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNLPE 480
Query: 481 PDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCLNA 540
PDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCLNA
Sbjct: 481 PDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCLNA 540
Query: 541 QEQFMSSLRPLAIQQIKAVSKSLISESSQPNTSSHNISVIADLHLSTIDWEGTSFSNSPA 600
QEQFMSSLRPLAIQQIKAVSKSLISESSQPNTSSHNISVIADLHLSTIDWEGTSFSNSPA
Sbjct: 541 QEQFMSSLRPLAIQQIKAVSKSLISESSQPNTSSHNISVIADLHLSTIDWEGTSFSNSPA 600
Query: 601 IQRNTFSHDLKSEVESELSAIPDGFENIPEQLSCESERYTANIKKVLDEDSDGISPEEHL 660
IQRNTFSHDLKSEVESELSAIPDGFENIPEQLSCESERYTANIKKVLDEDSDGISPEEHL
Sbjct: 601 IQRNTFSHDLKSEVESELSAIPDGFENIPEQLSCESERYTANIKKVLDEDSDGISPEEHL 660
Query: 661 LSGITDLCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSILSVKESCIANSGSDCTSHLS 720
LSGITDLCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSILSVKESCIANSGSDCTSHLS
Sbjct: 661 LSGITDLCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSILSVKESCIANSGSDCTSHLS 720
Query: 721 KDLPGIPLQNESRDSKILKGDQLLQEDYKVNTSVPYSVSNTVVKTCNVRPPNTALDHSRK 780
KDLPGIPLQNESRDSKILKGDQLLQEDYKVNTSVPYSVSNTVVKTCNVRPPNTALDHSRK
Sbjct: 721 KDLPGIPLQNESRDSKILKGDQLLQEDYKVNTSVPYSVSNTVVKTCNVRPPNTALDHSRK 780
Query: 781 VDMQTTRKILMKKSVCLDRHSSDEQSAPVFGKAKYTTQRMKHSSQKHNSSHFKESGHNKL 840
VDMQTTRKILMKKSVCLDRHSSDEQSAPVFGKAKYTTQRMKHSSQKHNSSHFKESGHNKL
Sbjct: 781 VDMQTTRKILMKKSVCLDRHSSDEQSAPVFGKAKYTTQRMKHSSQKHNSSHFKESGHNKL 840
Query: 841 SSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLSSLQCHKKENNSGTCLDSPLPLRQR 900
SSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLSSLQCHKKENNSGTCLDSPLPLRQR
Sbjct: 841 SSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLSSLQCHKKENNSGTCLDSPLPLRQR 900
Query: 901 LKLRFQST 908
LKLRFQST
Sbjct: 901 LKLRFQST 908
>gi|4758356 flap structure-specific endonuclease 1 [Homo sapiens]
Length = 380
Score = 103 bits (258), Expect = 6e-22
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 28/253 (11%)
Query: 1 MGVNDLWQILEPVK----QHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMK------ 50
MG+ L +++ V + +++ G+ +A+D S+ + + + G V++
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 51 -PHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSH 109
HL +F+R + + +K V+V +G+PP+LK+ ++KR++ R + K Q
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERR-AEAEKQLQQAQAAGA 119
Query: 110 FKSVLR--------------ECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTND 155
+ V + EC H+L +GIP++ A EAEA CA L G V T D
Sbjct: 120 EQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATED 179
Query: 156 GDTFLYGAQTVYRNFTMN-TKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGV 214
D +G+ + R+ T + K + + +S I +LGL+++ V L ILLG DY + +
Sbjct: 180 MDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC-ESI 238
Query: 215 PGVGKEQALKLIQ 227
G+G ++A+ LIQ
Sbjct: 239 RGIGPKRAVDLIQ 251
>gi|51988900 XPG-complementing protein [Homo sapiens]
Length = 1186
Score = 93.2 bits (230), Expect = 1e-18
Identities = 55/163 (33%), Positives = 92/163 (56%), Gaps = 8/163 (4%)
Query: 81 LKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCA 140
L++++++++N + + K ++ + + E +L GIP++QA EAEA CA
Sbjct: 739 LESNLLAQQNSLK---AQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCA 795
Query: 141 YLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVG 200
L+ G +T+D D +L+GA+ VYRNF K+ V+ Y ++LGLDR+ L+
Sbjct: 796 ILDLTDQTSGTITDDSDIWLFGARHVYRNFF--NKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 201 LAILLGCDYLPKGVPGVGKEQALKLIQILKGQSL--LQRFNRW 241
LA LLG DY +G+P VG A++++ G L L +F+ W
Sbjct: 854 LAYLLGSDY-TEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEW 895
Score = 65.5 bits (158), Expect = 2e-10
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEA-QTVKKMMG-SVMKPHLRNLFF 58
MGV LW++LE + + L GK +AVD+S+W+ +A + V+ G S+ PHL LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 59 RISYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLR 115
R+ L ++ +FV +G+ P LK + KR Q + S S+KT K+ L+
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRK--DLASSDSRKTTEKLLKTFLK 115
>gi|39995071 exonuclease 1 isoform b [Homo sapiens]
Length = 846
Score = 58.5 bits (140), Expect = 3e-08
Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
MG+ L Q ++ + I +R G+ +AVD W+ + + +P R + F +
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 SYLTQM---DVKLVFVMEGEPPKLKADVISKRNQSRYGS--SGKSWSQKTGRSHFKSVLR 115
++ + +K + V +G K +V R + R + GK ++ S +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 116 ECLHMLECL-----------GIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQ 164
+++ + G+ + A EA+A AYLN G V +T D D +G +
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 165 TVYRNFTMNTKDPHVDCYTMSSIKSKLG--LDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
V +D + + +LG + + IL GCDYL + G+G +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCR-QLGDVFTEEKFRYMCILSGCDYL-SSLRGIGLAKA 238
Query: 223 LKLIQILKGQSLLQ 236
K++++ +++
Sbjct: 239 CKVLRLANNPDIVK 252
>gi|39995069 exonuclease 1 isoform a [Homo sapiens]
Length = 803
Score = 58.5 bits (140), Expect = 3e-08
Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
MG+ L Q ++ + I +R G+ +AVD W+ + + +P R + F +
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 SYLTQM---DVKLVFVMEGEPPKLKADVISKRNQSRYGS--SGKSWSQKTGRSHFKSVLR 115
++ + +K + V +G K +V R + R + GK ++ S +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 116 ECLHMLECL-----------GIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQ 164
+++ + G+ + A EA+A AYLN G V +T D D +G +
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 165 TVYRNFTMNTKDPHVDCYTMSSIKSKLG--LDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
V +D + + +LG + + IL GCDYL + G+G +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCR-QLGDVFTEEKFRYMCILSGCDYL-SSLRGIGLAKA 238
Query: 223 LKLIQILKGQSLLQ 236
K++++ +++
Sbjct: 239 CKVLRLANNPDIVK 252
>gi|18491016 exonuclease 1 isoform b [Homo sapiens]
Length = 846
Score = 58.5 bits (140), Expect = 3e-08
Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
MG+ L Q ++ + I +R G+ +AVD W+ + + +P R + F +
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 SYLTQM---DVKLVFVMEGEPPKLKADVISKRNQSRYGS--SGKSWSQKTGRSHFKSVLR 115
++ + +K + V +G K +V R + R + GK ++ S +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 116 ECLHMLECL-----------GIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQ 164
+++ + G+ + A EA+A AYLN G V +T D D +G +
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 165 TVYRNFTMNTKDPHVDCYTMSSIKSKLG--LDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
V +D + + +LG + + IL GCDYL + G+G +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCR-QLGDVFTEEKFRYMCILSGCDYL-SSLRGIGLAKA 238
Query: 223 LKLIQILKGQSLLQ 236
K++++ +++
Sbjct: 239 CKVLRLANNPDIVK 252
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 43.9 bits (102), Expect = 7e-04
Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 45/406 (11%)
Query: 486 SFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCLNAQEQFM 545
+F+SH T+ + + SK+ S T+ +IS S+ PK++ + +
Sbjct: 4841 AFESHSTVSA-----YPEPSKVTSPNVTTSTMEDTTISRSI-----PKSSKTTRTETETT 4890
Query: 546 SSLRPLAIQQIKAVSKSL-ISESSQPNTSSHNISVIADLHLSTIDWEGTSFSNSPAIQRN 604
SSL P +++ S S I+ S++ +T + A +S D +S ++ P ++
Sbjct: 4891 SSLTP----KLRETSISQEITSSTETSTVPYKELTGATTEVSRTDVTSSSSTSFPGPDQS 4946
Query: 605 TFSHDLKSEVESELSAIPDGFENIPEQLSCESERYTANIKKVLDEDSDGISPEEHLLSGI 664
T S D+ +E + LS P E+ ++ ++ + A + D +P+ + S +
Sbjct: 4947 TVSLDISTETNTRLSTSPIMTESAEITITTQTGPHGATSQDTFTMDPSNTTPQAGIHSAM 5006
Query: 665 TD--LCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSILSVKESCIANSGSDCTSHLSKD 722
T L L RI +S+ P V+ KT S S S + S +S L +D
Sbjct: 5007 THGFSQLDVTTLMSRIPQDVSWTSP---PSVD-KTSSPSSFLSSPAMTTPSLISSTLPED 5062
Query: 723 LPGIPLQNESRDSKILKGDQLLQEDYKVNTSVPY--SVSNTVVKTCNVRPPNTALDHSRK 780
P+ + + D L V +S+P S S+ ++ T
Sbjct: 5063 KLSSPMTSLLTSGLVKITDILRTRLEPVTSSLPNFSSTSDKILATSK------------- 5109
Query: 781 VDMQTTRKIL----MKKSVCLDRHSSDEQSAPVFGKA---KYTTQRMKHSSQKHNSSHFK 833
D + T++I +++ +S E +P + K TTQ + ++ +
Sbjct: 5110 -DSKDTKEIFPSINTEETNVKANNSGHESHSPALADSETPKATTQMVITTTVGDPAPSTS 5168
Query: 834 ESGHNKLSSPKIHIKETEQCV-RSYETAENEESCFPDSTKSSLSSL 878
H + I + T R ET+ ++ES FP T LS +
Sbjct: 5169 MPVHGSSETTNIKREPTYFLTPRLRETSTSQESSFPTDTSFLLSKV 5214
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 40.4 bits (93), Expect = 0.008
Identities = 75/306 (24%), Positives = 124/306 (40%), Gaps = 52/306 (16%)
Query: 479 PEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCL 538
PE E S S++ L T E N L S SP LP S ++S++S+LL T
Sbjct: 687 PEISEA-SLMSNLPL--TSEASPVSNLPLTSETSPMSDLPLTSETSSVSSMLLTSETT-- 741
Query: 539 NAQEQFMSSLRPLAIQQIKAVSKSLISES------SQPNTSSHNISVIADLHLSTIDWEG 592
F+SSL PL + +S S I+E P+ S +S D +T G
Sbjct: 742 -----FVSSL-PLP-SETSPISNSSINERMAHQQRKSPSVSEEPLSPQKDESSATAKPLG 794
Query: 593 TSFSNSPAIQRNTFSHDLKSEVESELSAIPDGFENIP------EQLSCES-----ERYTA 641
+ ++ Q+ S+ + + S S P+ F + Q +C+S + Y A
Sbjct: 795 ENLTS----QQKNLSNTPEPIIMSSSSIAPEAFPSEDLHNKTLSQQTCKSHVDTEKPYPA 850
Query: 642 NIKKVLDEDSDGISPEEHLLSGITDLCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSIL 701
+I ++ + I + H + T+ + PL+ +F++ + + N P L+ +
Sbjct: 851 SIPELASTEM--IKVKNHSVLQRTEKKVLPSPLELSVFSEGTDNKGNELPSAKLQDKQYI 908
Query: 702 SVKESCIANSGSDC-------------TSHLSKDLPGIP----LQNESRDSKILKGDQLL 744
S + + GS TSH SK ++NESRDS+I K
Sbjct: 909 SSVDKAPFSEGSRNKTHKQGSTQSRLETSHTSKSSEPSKSPDGIRNESRDSEISKRKTAE 968
Query: 745 QEDYKV 750
Q + +
Sbjct: 969 QHSFGI 974
>gi|75677612 leucine rich repeat containing 37, member A3 [Homo
sapiens]
Length = 1634
Score = 36.2 bits (82), Expect = 0.14
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 32/217 (14%)
Query: 467 KQKRIKPK--ENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISA 524
K+ + PK E LP PD+V + SH+T Q L I+P E +A
Sbjct: 632 KRTIVSPKHPEVTLPHPDQVQTQHSHLTRATV------QPLDLGFTITPKSMTEVEPSTA 685
Query: 525 SLNSLLLPKN-----TPCLNAQEQF----MSSLRPLAIQQIKAVSKSLISESSQPNTSSH 575
+ + P + P Q Q ++++PL ++ ++ +E T+
Sbjct: 686 LMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLE--LTITTKPTTEVKPSPTTEE 743
Query: 576 NISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEV----ESELSAIPDGFENIPEQ 631
+ + DL L+ I T +S A+++ T + + +E++ P E +
Sbjct: 744 TSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDS 803
Query: 632 LSCESERYTANIKKVLDEDSDGISPEEHLLSGITDLC 668
L +SE YT N K L +PEEH S T++C
Sbjct: 804 L-VQSESYTQN--KAL------TAPEEHKASTSTNIC 831
>gi|119395736 insulin receptor isoform Long precursor [Homo sapiens]
Length = 1382
Score = 35.4 bits (80), Expect = 0.24
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 824 SQKHNSSHFKESGHNKLSSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLSSLQCHKK 883
SQKHN S +++S S PK S E EES F + + L ++ +
Sbjct: 694 SQKHNQSEYEDSAGECCSCPKTD---------SQILKELEESSFRKTFEDYLHNVVFVPR 744
Query: 884 ENNSGTCLDSPLPLRQRLKL 903
+ +SGT + P P R+R L
Sbjct: 745 KTSSGTGAEDPRPSRKRRSL 764
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 35.0 bits (79), Expect = 0.32
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 817 TQRMKHSSQKHNSSHFKESGHNKLSSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLS 876
T+++K+ S+ H + +E+ H+++ K H++ + V S ET+ NE + + +K +S
Sbjct: 581 TEKLKNQSESHKQA--QENLHDQVQEQKAHLRAAQDRVLSLETSVNELNSQLNESKEKVS 638
Query: 877 SLQCHKK 883
L K
Sbjct: 639 QLDIQIK 645
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 34.7 bits (78), Expect = 0.41
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 818 QRMKHSSQKHNSSHFKESGHNK--LSSPKIHIKETEQCVRSYETAENEESCFPDSTKSSL 875
+R++ S +K++ SH K S ++ L S + ++ CVR Y + + DS +SS+
Sbjct: 757 RRLRSSGKKNSVSHKKHSSSSEKTLHSKYVKGRDRSSCVRKYSESRSSLDYSSDSEQSSV 816
Query: 876 SSLQCHKKENNSG 888
+ Q +++ G
Sbjct: 817 QATQSAQEKEKQG 829
>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 1 [Homo sapiens]
Length = 1635
Score = 34.3 bits (77), Expect = 0.54
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 32/217 (14%)
Query: 467 KQKRIKPK--ENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISA 524
K+ + PK E LP PD+V + SH+T Q L I+P E +A
Sbjct: 632 KRTIVSPKHPEVTLPHPDQVQTQHSHLTRATV------QPLDLGFTITPKSMTEVEPSTA 685
Query: 525 SLNSLLLPKN-----TPCLNAQEQF----MSSLRPLAIQQIKAVSKSLISESSQPNTSSH 575
+ + P + P Q Q ++++PL ++ ++ +E T+
Sbjct: 686 LMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLE--LTITTKPTTEVKPSPTTEE 743
Query: 576 NISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEV----ESELSAIPDGFENIPEQ 631
+ DL L+ I T +S A+++ T + + +E++ P E +
Sbjct: 744 TSTQPPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDS 803
Query: 632 LSCESERYTANIKKVLDEDSDGISPEEHLLSGITDLC 668
L +SE YT N K L +PEEH S T++C
Sbjct: 804 L-VQSESYTQN--KAL------TAPEEHKASTSTNIC 831
>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 2 [Homo sapiens]
Length = 1700
Score = 34.3 bits (77), Expect = 0.54
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 32/217 (14%)
Query: 467 KQKRIKPK--ENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISA 524
K+ + PK E LP PD+V + SH+T Q L I+P E +A
Sbjct: 632 KRTIVSPKHPEVTLPHPDQVQTQHSHLTRATV------QPLDLGFTITPKSMTEVEPSTA 685
Query: 525 SLNSLLLPKN-----TPCLNAQEQF----MSSLRPLAIQQIKAVSKSLISESSQPNTSSH 575
+ + P + P Q Q ++++PL ++ ++ +E T+
Sbjct: 686 LMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLE--LTITTKPTTEVKPSPTTEE 743
Query: 576 NISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEV----ESELSAIPDGFENIPEQ 631
+ DL L+ I T +S A+++ T + + +E++ P E +
Sbjct: 744 TSTQPPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDS 803
Query: 632 LSCESERYTANIKKVLDEDSDGISPEEHLLSGITDLC 668
L +SE YT N K L +PEEH S T++C
Sbjct: 804 L-VQSESYTQN--KAL------TAPEEHKASTSTNIC 831
>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
Length = 1700
Score = 34.3 bits (77), Expect = 0.54
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 32/217 (14%)
Query: 467 KQKRIKPK--ENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISA 524
K+ + PK E LP PD+V + SH+T Q L I+P E +A
Sbjct: 632 KRTIVSPKHPEVTLPHPDQVQTQHSHLTRATV------QPLDLGFTITPKSMTEVEPSTA 685
Query: 525 SLNSLLLPKN-----TPCLNAQEQF----MSSLRPLAIQQIKAVSKSLISESSQPNTSSH 575
+ + P + P Q Q ++++PL ++ ++ +E T+
Sbjct: 686 LMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLE--LTITTKPTTEVKPSPTTEE 743
Query: 576 NISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEV----ESELSAIPDGFENIPEQ 631
+ DL L+ I T +S A+++ T + + +E++ P E +
Sbjct: 744 TSTQPPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDS 803
Query: 632 LSCESERYTANIKKVLDEDSDGISPEEHLLSGITDLC 668
L +SE YT N K L +PEEH S T++C
Sbjct: 804 L-VQSESYTQN--KAL------TAPEEHKASTSTNIC 831
>gi|239745855 PREDICTED: hypothetical protein XP_002343606 [Homo
sapiens]
Length = 870
Score = 33.9 bits (76), Expect = 0.71
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 36/219 (16%)
Query: 467 KQKRIKPK--ENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISA 524
K+ + PK E LP PD+V + SH+T Q L I+P E +A
Sbjct: 632 KRTIVSPKHPEVTLPHPDQVQTQHSHLTRATV------QPLDLGFTITPKSMTEVEPSTA 685
Query: 525 SLNSLLLPKN-----TPCLNAQEQF----MSSLRPLAIQQIKAVSKSLISESSQPNTSSH 575
+ + P + P Q Q ++++PL ++ ++ +E T+
Sbjct: 686 LMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLE--LTITTKPTTEVKPSPTTEE 743
Query: 576 NISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEVES------ELSAIPDGFENIP 629
+ DL L+ I T +S A+++ T H V+S E++ P E
Sbjct: 744 TSTQPPDLGLAIIPEPTTETGHSTALEKTTAPH--PDRVQSLHRSLTEVTGPPTELEPAQ 801
Query: 630 EQLSCESERYTANIKKVLDEDSDGISPEEHLLSGITDLC 668
+ L +SE YT N K L +PEE S T++C
Sbjct: 802 DSL-VQSESYTQN--KAL------TAPEEQKASTSTNIC 831
>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
Length = 1700
Score = 33.9 bits (76), Expect = 0.71
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 32/217 (14%)
Query: 467 KQKRIKPK--ENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISA 524
K+ + PK E LP PD+V + SH+T Q L I+P E +A
Sbjct: 632 KRTIVSPKHPEVTLPHPDQVQTQHSHLTRATV------QPLDLGFTITPKSMTEVEPSTA 685
Query: 525 SLNSLLLPKN-----TPCLNAQEQF----MSSLRPLAIQQIKAVSKSLISESSQPNTSSH 575
+ + P + P Q Q ++++PL ++ ++ +E T+
Sbjct: 686 LMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLE--LTITTKPTTEVKPSPTTEE 743
Query: 576 NISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEV----ESELSAIPDGFENIPEQ 631
+ DL L+ I T +S A+++ T + + +E++ P E +
Sbjct: 744 TSTQPPDLGLAIIPEPTTETRHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDS 803
Query: 632 LSCESERYTANIKKVLDEDSDGISPEEHLLSGITDLC 668
L +SE YT N K L +PEEH S T++C
Sbjct: 804 L-VQSESYTQN--KAL------TAPEEHKASTSTNIC 831
>gi|54633315 deoxynucleotidyltransferase, terminal, interacting
protein 2 [Homo sapiens]
Length = 756
Score = 33.5 bits (75), Expect = 0.92
Identities = 58/252 (23%), Positives = 97/252 (38%), Gaps = 28/252 (11%)
Query: 466 KKQKRIKPKENNLPEPDEVMSFQSHMT-----LKPTCEIFHKQNSKLNSGISPDPTLPQE 520
+K+ ++ P + + E + V +SH++ + PT + + SK S P E
Sbjct: 123 RKKPKVTPTKESYTE-EIVSEAESHVSGISRIVLPTEKTTGARRSKAKSLTDPSQESHTE 181
Query: 521 SISASLNSLLLPKNTPCLNAQEQFMSSLRPLAIQQIKAVSKSLISESSQPNTSSHNISVI 580
+IS + S + + + M R L Q K SK + Q + N
Sbjct: 182 AISDAETSSSDISFSGIATRRTRSMQ--RKLKAQTEKKDSKIVPGNEKQIVGTPVNSEDS 239
Query: 581 ADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEVESELSAIPDGFENIPEQLSCESERYT 640
S + S N P N F D + + EQ + ES + T
Sbjct: 240 DTRQTSHLQARSLSEINKPNFYNNDFDDDFSHRSSENILTVH-------EQANVESLKET 292
Query: 641 ANIKKVLDEDSDGISPE----EHLLSGITDLC-LQDLPLKERIFTKLSYPQD-------- 687
K LDED++GI+ E S + +L LQD L++ + + S PQ+
Sbjct: 293 KQNCKDLDEDANGITDEGKEINEKSSQLKNLSELQDTSLQQLVSQRHSTPQNKNAVSVHS 352
Query: 688 NLQPDVNLKTLS 699
NL + +K+L+
Sbjct: 353 NLNSEAVMKSLT 364
>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
Length = 638
Score = 33.5 bits (75), Expect = 0.92
Identities = 33/154 (21%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 753 SVPYSVSNTVVKTCNVRPPNTALDHSRKVDM----QTTRKILMKKSVCLDRHSSDEQSAP 808
S PYS+S V P A D +++D Q TR +K V L + + S
Sbjct: 453 SGPYSISQVVENQLPHCLP--AHDSKQRLDSISYCQLTRDCFPEKPVPLSLNQQENNS-- 508
Query: 809 VFGKAKYTTQRMKHSSQKHNSSHFKESGHNKLSSPKIHIKETEQCVRSYETAENEESCFP 868
G ++ KH S ++N++ + K K H++E ++ ++ + +
Sbjct: 509 --GSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYE 566
Query: 869 DSTKSSLSSLQCHKKENNSGTCLDSPLPLRQRLK 902
D+ S++ K+E + L R++ K
Sbjct: 567 DTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKK 600
>gi|58533172 zinc finger, matrin type 1 isoform 3 [Homo sapiens]
Length = 467
Score = 33.5 bits (75), Expect = 0.92
Identities = 33/154 (21%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 753 SVPYSVSNTVVKTCNVRPPNTALDHSRKVDM----QTTRKILMKKSVCLDRHSSDEQSAP 808
S PYS+S V P A D +++D Q TR +K V L + + S
Sbjct: 282 SGPYSISQVVENQLPHCLP--AHDSKQRLDSISYCQLTRDCFPEKPVPLSLNQQENNS-- 337
Query: 809 VFGKAKYTTQRMKHSSQKHNSSHFKESGHNKLSSPKIHIKETEQCVRSYETAENEESCFP 868
G ++ KH S ++N++ + K K H++E ++ ++ + +
Sbjct: 338 --GSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYE 395
Query: 869 DSTKSSLSSLQCHKKENNSGTCLDSPLPLRQRLK 902
D+ S++ K+E + L R++ K
Sbjct: 396 DTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKK 429
>gi|201862060 tripartite motif-containing 48 [Homo sapiens]
Length = 224
Score = 33.5 bits (75), Expect = 0.92
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 278 CRLCKSDKYCEPHDYEYCCPCEWHRTEHDRQLSEVENNIKKKAC 321
C LC S + H Y CP EW EH +L + ++ +KAC
Sbjct: 128 CLLCSSS---QEHRYHRHCPAEWAAEEHWEKLLKKMQSLWEKAC 168
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 33.1 bits (74), Expect = 1.2
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 466 KKQKRIKPKENNLPEPDEVMS---FQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESI 522
KK ++ KE E+ F H+ KP F Q +++SG S P QE
Sbjct: 902 KKPQQCDRKEQEKEANSELTQGFRFSIHLKQKPKYVKF--QMEQISSGSSKAPNKEQEVQ 959
Query: 523 SASLNSLLLPKNTPCLNAQEQFMSSLRPLAIQQIK-----AVSKSLISESSQPNTSSHNI 577
+L++ + +N+PC + P ++++K + + P T N+
Sbjct: 960 PQTLSTQTILENSPC--------PMMDPFQVEKVKQSTDRPTDRESAGDPKNPLTMPENL 1011
Query: 578 SVIADLHLSTIDWEGTSFSNSPAIQRNTFSH--DLKSEVESELSAIPDGFEN 627
V +L + T ++ N +Q+ T SH + K +V+ L A+ G N
Sbjct: 1012 PV-GELLIETTEYSVPFGGN---LQKTTDSHIAEEKEDVKRYLPAVALGSFN 1059
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo
sapiens]
Length = 6929
Score = 33.1 bits (74), Expect = 1.2
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 466 KKQKRIKPKENNLPEPDEVMS---FQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESI 522
KK ++ KE E+ F H+ KP F Q +++SG S P QE
Sbjct: 831 KKPQQCDRKEQEKEANSELTQGFRFSIHLKQKPKYVKF--QMEQISSGSSKAPNKEQEVQ 888
Query: 523 SASLNSLLLPKNTPCLNAQEQFMSSLRPLAIQQIK-----AVSKSLISESSQPNTSSHNI 577
+L++ + +N+PC + P ++++K + + P T N+
Sbjct: 889 PQTLSTQTILENSPC--------PMMDPFQVEKVKQSTDRPTDRESAGDPKNPLTMPENL 940
Query: 578 SVIADLHLSTIDWEGTSFSNSPAIQRNTFSH--DLKSEVESELSAIPDGFEN 627
V +L + T ++ N +Q+ T SH + K +V+ L A+ G N
Sbjct: 941 PV-GELLIETTEYSVPFGGN---LQKTTDSHIAEEKEDVKRYLPAVALGSFN 988
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo
sapiens]
Length = 6929
Score = 33.1 bits (74), Expect = 1.2
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 466 KKQKRIKPKENNLPEPDEVMS---FQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESI 522
KK ++ KE E+ F H+ KP F Q +++SG S P QE
Sbjct: 831 KKPQQCDRKEQEKEANSELTQGFRFSIHLKQKPKYVKF--QMEQISSGSSKAPNKEQEVQ 888
Query: 523 SASLNSLLLPKNTPCLNAQEQFMSSLRPLAIQQIK-----AVSKSLISESSQPNTSSHNI 577
+L++ + +N+PC + P ++++K + + P T N+
Sbjct: 889 PQTLSTQTILENSPC--------PMMDPFQVEKVKQSTDRPTDRESAGDPKNPLTMPENL 940
Query: 578 SVIADLHLSTIDWEGTSFSNSPAIQRNTFSH--DLKSEVESELSAIPDGFEN 627
V +L + T ++ N +Q+ T SH + K +V+ L A+ G N
Sbjct: 941 PV-GELLIETTEYSVPFGGN---LQKTTDSHIAEEKEDVKRYLPAVALGSFN 988
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo
sapiens]
Length = 6929
Score = 33.1 bits (74), Expect = 1.2
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 466 KKQKRIKPKENNLPEPDEVMS---FQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESI 522
KK ++ KE E+ F H+ KP F Q +++SG S P QE
Sbjct: 831 KKPQQCDRKEQEKEANSELTQGFRFSIHLKQKPKYVKF--QMEQISSGSSKAPNKEQEVQ 888
Query: 523 SASLNSLLLPKNTPCLNAQEQFMSSLRPLAIQQIK-----AVSKSLISESSQPNTSSHNI 577
+L++ + +N+PC + P ++++K + + P T N+
Sbjct: 889 PQTLSTQTILENSPC--------PMMDPFQVEKVKQSTDRPTDRESAGDPKNPLTMPENL 940
Query: 578 SVIADLHLSTIDWEGTSFSNSPAIQRNTFSH--DLKSEVESELSAIPDGFEN 627
V +L + T ++ N +Q+ T SH + K +V+ L A+ G N
Sbjct: 941 PV-GELLIETTEYSVPFGGN---LQKTTDSHIAEEKEDVKRYLPAVALGSFN 988
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 33.1 bits (74), Expect = 1.2
Identities = 92/472 (19%), Positives = 185/472 (39%), Gaps = 53/472 (11%)
Query: 304 EHDRQLSEVENNIKKK---ACCCEGFPFHEVIQEFLLNKDKLVKVIRYQRPDLLLFQRFT 360
E D+ ++E++ ++ + + CE ++ +K+KLVK I + +
Sbjct: 1547 ERDKLITEMDRSLLENQSLSSSCESLKL--ALEGLTEDKEKLVKEIESLKSSKIA----- 1599
Query: 361 LEKMEWPN-HYACEKLL-VLLTHYDMIERKLGSRNSNQLQPIRIVKTRIRNGVHCFEIEW 418
E EW H +K +LL Y+ + SN+ + I+ V +R
Sbjct: 1600 -ESTEWQEKHKELQKEYEILLQSYENV--------SNEAERIQHVVEAVRQ--------- 1641
Query: 419 EKPEHYAMEDKQHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNL 478
EK E Y E E + A E+ + +K + K K+QK ++ +E N
Sbjct: 1642 EKQELYGKLRSTEANKK----ETEKQLQEAEQEMEEMKEKMRKFAKSKQQKILELEEEND 1697
Query: 479 PEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCL 538
EV + T K E N+ + + + E++S SL+ K++
Sbjct: 1698 RLRAEV--HPAGDTAKECMETLLSSNASMKEELE-RVKMEYETLSKKFQSLMSEKDSLSE 1754
Query: 539 NAQ------EQFMSSLRPLAIQQIKAVSKSLISESSQ--PNTSSHNISVIADLHLSTIDW 590
Q E +S L + ++ E +Q P + S+ + +
Sbjct: 1755 EVQDLKHQIEGNVSKQANLEATEKHDNQTNVTEEGTQSIPGETEEQDSLSMSTRPTCSES 1814
Query: 591 EGTSFSNSPAIQRNTFSHDLKSEVESELSAIPDGFENIPE--QLSCESERYTANIKK-VL 647
++ S +PA+ ++ SHD + ++ + + + E Q + E + N K +L
Sbjct: 1815 VPSAKSANPAVSKDFSSHDEINNYLQQIDQLKERIAGLEEEKQKNKEFSQTLENEKNTLL 1874
Query: 648 DEDSDGISPEEHLLSGITDLCLQDLPLKERI--FTKLSYPQDNLQPDVNLKTLSILSVKE 705
+ S + L +T + L + ++E + TKL + + D+ + ++ L+
Sbjct: 1875 SQISTKDGELKMLQEEVTKMNLLNQQIQEELSRVTKLKETAEEEKDDLEERLMNQLAELN 1934
Query: 706 SCIANSGSDCT-SHLSKDLPGIPLQNESRDSKILKGD--QLLQEDYKVNTSV 754
I N D T + + +L ++N + L+ + QL++E KV + +
Sbjct: 1935 GSIGNYCQDVTDAQIKNELLESEMKNLKKCVSELEEEKQQLVKEKTKVESEI 1986
>gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo
sapiens]
Length = 1045
Score = 32.7 bits (73), Expect = 1.6
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 17/101 (16%)
Query: 767 NVRPPNTALDHSRKVDMQTTRKILMKKSVCLDRHSSDEQSAPVFGKAKYTTQRMKHSSQK 826
N + + SR D +T K +K+ L E GKA TT+ K +K
Sbjct: 835 NYKNESDTFSDSRSSDRETKHKRRKRKTRSLSVEIVYE------GKATDTTKHHKKKKKK 888
Query: 827 HNSSHFKESGHNKLSSPKI-----------HIKETEQCVRS 856
H H K G N SP + +KE +C S
Sbjct: 889 HKKKHKKHHGDNASRSPVVITIDSDSDKDSEVKEDTECDNS 929
>gi|27886520 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 32.7 bits (73), Expect = 1.6
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 461 LEIKGKKQKRIKPKENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQE 520
L + +KQ++I+PK N P+ + + Q+ +P +S+L + + Q
Sbjct: 579 LPSENEKQQQIQPKAYN---PETLTTIQTQDISQPGTFPAVSASSQLPNSDALLQQATQF 635
Query: 521 SISASLNSLLLPKNTPCLN-------AQEQFMSSLRPLAIQQIKAVSKSLISESSQPNTS 573
+ + +L + +N +Q+Q S L+ A + +S ++ PN+
Sbjct: 636 QTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFPS---PNSV 692
Query: 574 SHNISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEVESELSAIPDGFENIPEQLS 633
S + I L + T+ +S ++ + + ++ S L + PDG EN+ EQLS
Sbjct: 693 SQLQNTIQQLQAGSFTGS-TASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLS 751
Query: 634 CESERYTANIKKVLDEDSDGISP 656
A+I + + + G+SP
Sbjct: 752 -------ADIFQQVSQIQSGVSP 767
>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
sapiens]
Length = 1531
Score = 32.7 bits (73), Expect = 1.6
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 461 LEIKGKKQKRIKPKENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQE 520
L + +KQ++I+PK N P+ + + Q+ +P +S+L + + Q
Sbjct: 655 LPSENEKQQQIQPKAYN---PETLTTIQTQDISQPGTFPAVSASSQLPNSDALLQQATQF 711
Query: 521 SISASLNSLLLPKNTPCLN-------AQEQFMSSLRPLAIQQIKAVSKSLISESSQPNTS 573
+ + +L + +N +Q+Q S L+ A + +S ++ PN+
Sbjct: 712 QTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFPS---PNSV 768
Query: 574 SHNISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEVESELSAIPDGFENIPEQLS 633
S + I L + T+ +S ++ + + ++ S L + PDG EN+ EQLS
Sbjct: 769 SQLQNTIQQLQAGSFTGS-TASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLS 827
Query: 634 CESERYTANIKKVLDEDSDGISP 656
A+I + + + G+SP
Sbjct: 828 -------ADIFQQVSQIQSGVSP 843
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,288,466
Number of Sequences: 37866
Number of extensions: 1708290
Number of successful extensions: 4990
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 4903
Number of HSP's gapped (non-prelim): 139
length of query: 908
length of database: 18,247,518
effective HSP length: 111
effective length of query: 797
effective length of database: 14,044,392
effective search space: 11193380424
effective search space used: 11193380424
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.