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Search of human proteins with 190358548
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190358548 bovine seminal plasma protein-like 1 [Homo
sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190358548 bovine seminal plasma protein-like 1 [Homo sapiens] 297 1e-81
gi|12408682 epididymal sperm binding protein 1 [Homo sapiens] 100 3e-22
gi|16933542 fibronectin 1 isoform 3 preproprotein [Homo sapiens] 66 9e-12
gi|47132557 fibronectin 1 isoform 1 preproprotein [Homo sapiens] 66 9e-12
gi|47132555 fibronectin 1 isoform 4 preproprotein [Homo sapiens] 66 9e-12
gi|47132553 fibronectin 1 isoform 5 preproprotein [Homo sapiens] 66 9e-12
gi|47132551 fibronectin 1 isoform 2 preproprotein [Homo sapiens] 66 9e-12
gi|47132549 fibronectin 1 isoform 6 preproprotein [Homo sapiens] 66 9e-12
gi|47132547 fibronectin 1 isoform 7 preproprotein [Homo sapiens] 66 9e-12
gi|189217853 matrix metalloproteinase 2 isoform b [Homo sapiens] 64 3e-11
gi|11342666 matrix metalloproteinase 2 isoform a preproprotein [... 64 3e-11
gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens] 61 2e-10
gi|145275213 coagulation factor XII precursor [Homo sapiens] 51 3e-07
gi|4504383 HGF activator preproprotein [Homo sapiens] 49 9e-07
gi|4505245 mannose receptor C type 1 precursor [Homo sapiens] 47 6e-06
gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens] 47 6e-06
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens] 46 7e-06
gi|55953106 phospholipase A2 receptor 1 isoform 2 precursor [Hom... 43 8e-05
gi|55953104 phospholipase A2 receptor 1 isoform 1 precursor [Hom... 43 8e-05
gi|119964726 insulin-like growth factor 2 receptor precursor [Ho... 42 1e-04
gi|110624774 mannose receptor, C type 2 [Homo sapiens] 41 2e-04
gi|144446030 lymphocyte antigen 75 [Homo sapiens] 32 0.15
gi|39930511 collagen and calcium binding EGF domains 1 [Homo sap... 29 0.94
gi|195972873 phospholipase C eta 1 isoform c [Homo sapiens] 27 3.6
gi|195972871 phospholipase C eta 1 isoform a [Homo sapiens] 27 3.6
gi|57863298 phospholipase C eta 1 isoform b [Homo sapiens] 27 3.6
gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens] 27 6.1
gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens] 27 6.1
gi|122937472 bicaudal C homolog 1 [Homo sapiens] 27 6.1
gi|187937176 NACHT, leucine rich repeat and PYD containing 7 iso... 27 6.1
>gi|190358548 bovine seminal plasma protein-like 1 [Homo sapiens]
Length = 132
Score = 297 bits (761), Expect = 1e-81
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MGSLMLLFVETTRNSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCI 60
MGSLMLLFVETTRNSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCI
Sbjct: 1 MGSLMLLFVETTRNSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCI 60
Query: 61 KSKARHKWCSLNKTYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTK 120
KSKARHKWCSLNKTYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTK
Sbjct: 61 KSKARHKWCSLNKTYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTK 120
Query: 121 NFNKDRIWKYCE 132
NFNKDRIWKYCE
Sbjct: 121 NFNKDRIWKYCE 132
>gi|12408682 epididymal sperm binding protein 1 [Homo sapiens]
Length = 223
Score = 100 bits (249), Expect = 3e-22
Identities = 38/89 (42%), Positives = 50/89 (56%)
Query: 44 ECVFPFHYKNGTYYDCIKSKARHKWCSLNKTYEGYWKFCSAEDFANCVFPFWYRRLIYWE 103
ECVFPF YK Y+ C + WC+ Y G WK+C +ED+ C+FPF YR Y
Sbjct: 28 ECVFPFTYKGSVYFTCTHIHSLSPWCATRAVYNGQWKYCQSEDYPRCIFPFIYRGKAYNS 87
Query: 104 CTDDGEAFGKKWCSLTKNFNKDRIWKYCE 132
C G G WCS+T F++ + WK+CE
Sbjct: 88 CISQGSFLGSLWCSVTSVFDEKQQWKFCE 116
Score = 70.1 bits (170), Expect = 5e-13
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 45 CVFPFHYKNGTYYDCIKSKARHKWCSL--NKTYEGYWKFCSAEDFAN------CVFPFWY 96
C+FP Y+N DC++ ++ WC N +G W FC+ + C FPF Y
Sbjct: 129 CIFPSIYRNNVVSDCMEDESNKLWCPTTENMDKDGKWSFCADTRISALVPGFPCHFPFNY 188
Query: 97 RRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
+ Y+ CT+ G WC+ + N+++D W YC
Sbjct: 189 KNKNYFNCTNKGSKENLVWCATSYNYDQDHTWVYC 223
>gi|16933542 fibronectin 1 isoform 3 preproprotein [Homo sapiens]
Length = 2355
Score = 65.9 bits (159), Expect = 9e-12
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 41 TDGE-CVFPFHYKNGTYYDCIKSKAR--HKWCSLNKTYEGYWKFCSAEDF---------- 87
++GE CV PF Y T+Y C + H WCS YE K+ D
Sbjct: 355 SNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGN 414
Query: 88 ---ANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
A C FPF Y Y +CT +G KWC T+N++ D+ + +C
Sbjct: 415 SNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFC 461
>gi|47132557 fibronectin 1 isoform 1 preproprotein [Homo sapiens]
Length = 2477
Score = 65.9 bits (159), Expect = 9e-12
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 41 TDGE-CVFPFHYKNGTYYDCIKSKAR--HKWCSLNKTYEGYWKFCSAEDF---------- 87
++GE CV PF Y T+Y C + H WCS YE K+ D
Sbjct: 355 SNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGN 414
Query: 88 ---ANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
A C FPF Y Y +CT +G KWC T+N++ D+ + +C
Sbjct: 415 SNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFC 461
>gi|47132555 fibronectin 1 isoform 4 preproprotein [Homo sapiens]
Length = 2330
Score = 65.9 bits (159), Expect = 9e-12
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 41 TDGE-CVFPFHYKNGTYYDCIKSKAR--HKWCSLNKTYEGYWKFCSAEDF---------- 87
++GE CV PF Y T+Y C + H WCS YE K+ D
Sbjct: 355 SNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGN 414
Query: 88 ---ANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
A C FPF Y Y +CT +G KWC T+N++ D+ + +C
Sbjct: 415 SNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFC 461
>gi|47132553 fibronectin 1 isoform 5 preproprotein [Homo sapiens]
Length = 2296
Score = 65.9 bits (159), Expect = 9e-12
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 41 TDGE-CVFPFHYKNGTYYDCIKSKAR--HKWCSLNKTYEGYWKFCSAEDF---------- 87
++GE CV PF Y T+Y C + H WCS YE K+ D
Sbjct: 355 SNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGN 414
Query: 88 ---ANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
A C FPF Y Y +CT +G KWC T+N++ D+ + +C
Sbjct: 415 SNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFC 461
>gi|47132551 fibronectin 1 isoform 2 preproprotein [Homo sapiens]
Length = 2421
Score = 65.9 bits (159), Expect = 9e-12
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 41 TDGE-CVFPFHYKNGTYYDCIKSKAR--HKWCSLNKTYEGYWKFCSAEDF---------- 87
++GE CV PF Y T+Y C + H WCS YE K+ D
Sbjct: 355 SNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGN 414
Query: 88 ---ANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
A C FPF Y Y +CT +G KWC T+N++ D+ + +C
Sbjct: 415 SNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFC 461
>gi|47132549 fibronectin 1 isoform 6 preproprotein [Homo sapiens]
Length = 2176
Score = 65.9 bits (159), Expect = 9e-12
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 41 TDGE-CVFPFHYKNGTYYDCIKSKAR--HKWCSLNKTYEGYWKFCSAEDF---------- 87
++GE CV PF Y T+Y C + H WCS YE K+ D
Sbjct: 355 SNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGN 414
Query: 88 ---ANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
A C FPF Y Y +CT +G KWC T+N++ D+ + +C
Sbjct: 415 SNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFC 461
>gi|47132547 fibronectin 1 isoform 7 preproprotein [Homo sapiens]
Length = 657
Score = 65.9 bits (159), Expect = 9e-12
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 41 TDGE-CVFPFHYKNGTYYDCIKSKAR--HKWCSLNKTYEGYWKFCSAEDF---------- 87
++GE CV PF Y T+Y C + H WCS YE K+ D
Sbjct: 355 SNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGN 414
Query: 88 ---ANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
A C FPF Y Y +CT +G KWC T+N++ D+ + +C
Sbjct: 415 SNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFC 461
>gi|189217853 matrix metalloproteinase 2 isoform b [Homo sapiens]
Length = 610
Score = 64.3 bits (155), Expect = 3e-11
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 45 CVFPFHYKNGTYYDCIKSKAR---HKWCSLNKTYEGYWK--FCSA---------EDFANC 90
C FPF ++ GT YD ++ R ++WC + Y+ K FC + A C
Sbjct: 241 CKFPFRFQ-GTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPC 299
Query: 91 VFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
VFPF + Y CT G + GK WC+ T N++ DR W +C
Sbjct: 300 VFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFC 340
Score = 44.3 bits (103), Expect = 3e-05
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 90 CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
C FPF + Y CTD G + G WCS T NF KD + +C
Sbjct: 183 CKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFC 224
>gi|11342666 matrix metalloproteinase 2 isoform a preproprotein
[Homo sapiens]
Length = 660
Score = 64.3 bits (155), Expect = 3e-11
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 45 CVFPFHYKNGTYYDCIKSKAR---HKWCSLNKTYEGYWK--FCSA---------EDFANC 90
C FPF ++ GT YD ++ R ++WC + Y+ K FC + A C
Sbjct: 291 CKFPFRFQ-GTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPC 349
Query: 91 VFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
VFPF + Y CT G + GK WC+ T N++ DR W +C
Sbjct: 350 VFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFC 390
Score = 44.3 bits (103), Expect = 3e-05
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 90 CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
C FPF + Y CTD G + G WCS T NF KD + +C
Sbjct: 233 CKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFC 274
>gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens]
Length = 707
Score = 61.2 bits (147), Expect = 2e-10
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 27 LSSTVETITHFPEVTDGECVFPFHYKNGTYYDCIKSKARH--KWCSLNKTY--EGYWKFC 82
L V T F C FPF ++ +Y C WCS Y + + FC
Sbjct: 212 LGKGVVVPTRFGNADGAACHFPFIFEGRSYSACTTDGRSDGLPWCSTTANYDTDDRFGFC 271
Query: 83 SAE---------DFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
+E D C FPF ++ Y CT DG + G +WC+ T N+++D+++ +C
Sbjct: 272 PSERLYTQDGNADGKPCQFPFIFQGQSYSACTTDGRSDGYRWCATTANYDRDKLFGFC 329
Score = 58.5 bits (140), Expect = 1e-09
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 42 DGE-CVFPFHYKNGTYYDCIKSKAR--HKWCSLNKTYEG--YWKFCSAEDFAN------- 89
DG+ C FPF ++ +Y C ++WC+ Y+ + FC +
Sbjct: 284 DGKPCQFPFIFQGQSYSACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMGGNSA 343
Query: 90 ---CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
CVFPF + Y CT +G G+ WC+ T NF+ D+ W +C
Sbjct: 344 GELCVFPFTFLGKEYSTCTSEGRGDGRLWCATTSNFDSDKKWGFC 388
>gi|145275213 coagulation factor XII precursor [Homo sapiens]
Length = 615
Score = 50.8 bits (120), Expect = 3e-07
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 90 CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
C FPF Y R +Y +CT G + WC+ T NF++D+ W YC
Sbjct: 47 CHFPFQYHRQLYHKCTHKGRPGPQPWCATTPNFDQDQRWGYC 88
>gi|4504383 HGF activator preproprotein [Homo sapiens]
Length = 655
Score = 49.3 bits (116), Expect = 9e-07
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 85 EDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
ED C FPF Y + CT +G A +KWC+ T N+++DR W YC
Sbjct: 103 EDGRPCRFPFRYGGRMLHACTSEGSAH-RKWCATTHNYDRDRAWGYC 148
Score = 29.6 bits (65), Expect = 0.72
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 45 CVFPFHYKNGTYYDCIKSKARH-KWCSLNKTY--EGYWKFC 82
C FPF Y + C + H KWC+ Y + W +C
Sbjct: 108 CRFPFRYGGRMLHACTSEGSAHRKWCATTHNYDRDRAWGYC 148
>gi|4505245 mannose receptor C type 1 precursor [Homo sapiens]
Length = 1456
Score = 46.6 bits (109), Expect = 6e-06
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 72 NKTYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
++ YE + + A C FPF + Y +CT G + G WC T +++ D+++ YC
Sbjct: 150 SRGYEAMYTLLGNANGATCAFPFKFENKWYADCTSAGRSDGWLWCGTTTDYDTDKLFGYC 209
Score = 27.3 bits (59), Expect = 3.6
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 45 CVFPFHYKNGTYYDCIKSKARH--KWCSLNKTYE 76
C FPF ++N Y DC + WC Y+
Sbjct: 168 CAFPFKFENKWYADCTSAGRSDGWLWCGTTTDYD 201
>gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens]
Length = 1456
Score = 46.6 bits (109), Expect = 6e-06
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 72 NKTYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
++ YE + + A C FPF + Y +CT G + G WC T +++ D+++ YC
Sbjct: 150 SRGYEAMYTLLGNANGATCAFPFKFENKWYADCTSAGRSDGWLWCGTTTDYDTDKLFGYC 209
Score = 27.3 bits (59), Expect = 3.6
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 45 CVFPFHYKNGTYYDCIKSKARH--KWCSLNKTYE 76
C FPF ++N Y DC + WC Y+
Sbjct: 168 CAFPFKFENKWYADCTSAGRSDGWLWCGTTTDYD 201
>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
Length = 794
Score = 46.2 bits (108), Expect = 7e-06
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 90 CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYCE 132
C FPF + Y ECT DG G+ WC+ T ++ D W +CE
Sbjct: 127 CHFPFLFLDKEYDECTSDGREDGRLWCATTYDYKADEKWGFCE 169
>gi|55953106 phospholipase A2 receptor 1 isoform 2 precursor [Homo
sapiens]
Length = 1324
Score = 42.7 bits (99), Expect = 8e-05
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 90 CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
C+FPF Y + ECT +G WC+ T + +D W +C
Sbjct: 178 CMFPFQYNHQWHHECTREGREDDLLWCATTSRYERDEKWGFC 219
Score = 31.2 bits (69), Expect = 0.25
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 45 CVFPFHYKNGTYYDCIKSKARHK--WCSLNKTYE--GYWKFC 82
C+FPF Y + +++C + WC+ YE W FC
Sbjct: 178 CMFPFQYNHQWHHECTREGREDDLLWCATTSRYERDEKWGFC 219
>gi|55953104 phospholipase A2 receptor 1 isoform 1 precursor [Homo
sapiens]
Length = 1463
Score = 42.7 bits (99), Expect = 8e-05
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 90 CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
C+FPF Y + ECT +G WC+ T + +D W +C
Sbjct: 178 CMFPFQYNHQWHHECTREGREDDLLWCATTSRYERDEKWGFC 219
Score = 31.2 bits (69), Expect = 0.25
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 45 CVFPFHYKNGTYYDCIKSKARHK--WCSLNKTYE--GYWKFC 82
C+FPF Y + +++C + WC+ YE W FC
Sbjct: 178 CMFPFQYNHQWHHECTREGREDDLLWCATTSRYERDEKWGFC 219
>gi|119964726 insulin-like growth factor 2 receptor precursor [Homo
sapiens]
Length = 2491
Score = 42.0 bits (97), Expect = 1e-04
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 85 EDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
+D CVFPF + Y EC + A K WCS T ++++D W +C
Sbjct: 1898 DDGVPCVFPFIFNGKSYEECIIESRA--KLWCSTTADYDRDHEWGFC 1942
Score = 39.3 bits (90), Expect = 0.001
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 38 PEVTDG-ECVFPFHYKNGTYYDCIKSKARHKWCSLNKTY--EGYWKFC 82
PE DG CVFPF + +Y +CI WCS Y + W FC
Sbjct: 1895 PETDDGVPCVFPFIFNGKSYEECIIESRAKLWCSTTADYDRDHEWGFC 1942
>gi|110624774 mannose receptor, C type 2 [Homo sapiens]
Length = 1479
Score = 41.2 bits (95), Expect = 2e-04
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 90 CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
C PF Y + CT G G WC+ T+++ KD W +C
Sbjct: 187 CTIPFKYDNQWFHGCTSTGREDGHLWCATTQDYGKDERWGFC 228
Score = 31.6 bits (70), Expect = 0.19
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 45 CVFPFHYKNGTYYDCIKS--KARHKWCSLNKTY--EGYWKFCSAEDFANCVFPFW 95
C PF Y N ++ C + + H WC+ + Y + W FC + +N FW
Sbjct: 187 CTIPFKYDNQWFHGCTSTGREDGHLWCATTQDYGKDERWGFCPIK--SNDCETFW 239
>gi|144446030 lymphocyte antigen 75 [Homo sapiens]
Length = 1722
Score = 32.0 bits (71), Expect = 0.15
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 90 CVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYC 131
C FPF + +C D + G WC+ T N+ DR W C
Sbjct: 169 CEFPFLIDGTWHHDCILDEDHSGP-WCATTLNYEYDRKWGIC 209
Score = 28.1 bits (61), Expect = 2.1
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 45 CVFPFHYKNGTYYDCIKSKARH-KWC--SLNKTYEGYWKFC 82
C FPF ++DCI + WC +LN Y+ W C
Sbjct: 169 CEFPFLIDGTWHHDCILDEDHSGPWCATTLNYEYDRKWGIC 209
>gi|39930511 collagen and calcium binding EGF domains 1 [Homo
sapiens]
Length = 406
Score = 29.3 bits (64), Expect = 0.94
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 13/76 (17%)
Query: 55 TYYDCIKSKARHKWCSLNKTYEGYWKF----CSAEDFANCVFPFWYRRLIYWECTDDGEA 110
T Y C+KS C K +GY KF C ED+ C +CTD+
Sbjct: 55 TKYPCLKSSGELTTCYRKKCCKGY-KFVLGQCIPEDYDVCA-----EAPCEQQCTDN--- 105
Query: 111 FGKKWCSLTKNFNKDR 126
FG+ C+ + DR
Sbjct: 106 FGRVLCTCYPGYRYDR 121
>gi|195972873 phospholipase C eta 1 isoform c [Homo sapiens]
Length = 1002
Score = 27.3 bits (59), Expect = 3.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 42 DGECVFPFHYKNGTYYDCIKSKARHKWCSLNK 73
+ EC F HY NGT ++S R K SL K
Sbjct: 469 EDECKFKLHYSNGTTEHQVESFIRKKLESLLK 500
>gi|195972871 phospholipase C eta 1 isoform a [Homo sapiens]
Length = 1693
Score = 27.3 bits (59), Expect = 3.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 42 DGECVFPFHYKNGTYYDCIKSKARHKWCSLNK 73
+ EC F HY NGT ++S R K SL K
Sbjct: 469 EDECKFKLHYSNGTTEHQVESFIRKKLESLLK 500
>gi|57863298 phospholipase C eta 1 isoform b [Homo sapiens]
Length = 1655
Score = 27.3 bits (59), Expect = 3.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 42 DGECVFPFHYKNGTYYDCIKSKARHKWCSLNK 73
+ EC F HY NGT ++S R K SL K
Sbjct: 451 EDECKFKLHYSNGTTEHQVESFIRKKLESLLK 482
>gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens]
Length = 860
Score = 26.6 bits (57), Expect = 6.1
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 38 PEVTDGECVFPFHYKN-GTYYDCIKSKARHKWCSLNKTYEGYWKFCSAE 85
P+ GE V HY GT IK +W S+ + G C +E
Sbjct: 468 PKPGTGEPVLSLHYSTEGTTTSTIKLNFTDEWSSIASSSRGIGSHCKSE 516
>gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]
Length = 880
Score = 26.6 bits (57), Expect = 6.1
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 38 PEVTDGECVFPFHYKN-GTYYDCIKSKARHKWCSLNKTYEGYWKFCSAE 85
P+ GE V HY GT IK +W S+ + G C +E
Sbjct: 488 PKPGTGEPVLSLHYSTEGTTTSTIKLNFTDEWSSIASSSRGIGSHCKSE 536
>gi|122937472 bicaudal C homolog 1 [Homo sapiens]
Length = 974
Score = 26.6 bits (57), Expect = 6.1
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 50 HY-KNGTYYDCIKSKARHKWCSLNKTYEG 77
HY + Y DCI S C+LN +++G
Sbjct: 847 HYLSSSNYMDCISSLTGSNGCNLNSSFKG 875
>gi|187937176 NACHT, leucine rich repeat and PYD containing 7
isoform 3 [Homo sapiens]
Length = 1037
Score = 26.6 bits (57), Expect = 6.1
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 70 SLNKTYEGYWKFCSAEDFANCVFP---FWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDR 126
S+N+ G W C A + NC W L+ + C G A T + ++
Sbjct: 911 SINQIARGLWILCQALENPNCNLKHLRLWSCSLMPFYCQHLGSALLSNQKLETLDLGQNH 970
Query: 127 IWK 129
+WK
Sbjct: 971 LWK 973
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.138 0.493
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,396,756
Number of Sequences: 37866
Number of extensions: 228470
Number of successful extensions: 630
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 541
Number of HSP's gapped (non-prelim): 65
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.