Guide to the Human Genome
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Name: ELSPBP1 Sequence: fasta or formatted (223aa) NCBI GI: 12408682
Description:

epididymal sperm binding protein 1

Referenced in:

Fibronectin Family
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7          6           1
 C cysteine            7.2         16           1
 D aspartate           4.0          9           1
 E glutamate           4.9         11           2
 F phenylalanine       6.7         15           1
 G glycine             5.8         13           2
 H histidine           2.2          5           1
 I isoleucine          3.1          7           1
 K lysine              5.8         13           1
 L leucine             4.9         11           2
 M methionine          1.8          4           1
 N asparagine          6.7         15           2
 P proline             4.5         10           1
 Q glutamine           2.7          6           2
 R arginine            3.1          7           1
 S serine             10.3         23           2
 T threonine           6.7         15           2
 V valine              4.5         10           2
 W tryptophan          4.5         10           1
 Y tyrosine            7.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epididymal sperm binding protein 1 
MMP2                  0.218   matrix metalloproteinase 2 isoform b 
MMP2                  0.218   matrix metalloproteinase 2 isoform a preproprotein [...
MMP9                  0.195   matrix metalloproteinase 9 preproprotein 
FN1                   0.160   fibronectin 1 isoform 3 preproprotein 
FN1                   0.160   fibronectin 1 isoform 1 preproprotein 
FN1                   0.160   fibronectin 1 isoform 4 preproprotein 
FN1                   0.160   fibronectin 1 isoform 5 preproprotein 
FN1                   0.160   fibronectin 1 isoform 2 preproprotein 
FN1                   0.160   fibronectin 1 isoform 6 preproprotein 
FN1                   0.160   fibronectin 1 isoform 7 preproprotein 
BSPH1                 0.156   bovine seminal plasma protein-like 1 
SEL1L                 0.079   sel-1 suppressor of lin-12-like 
F12                   0.079   coagulation factor XII precursor 
PLA2R1                0.067   phospholipase A2 receptor 1 isoform 2 precursor [Hom...
PLA2R1                0.067   phospholipase A2 receptor 1 isoform 1 precursor [Hom...
IGF2R                 0.062   insulin-like growth factor 2 receptor precursor [Ho...
HGFAC                 0.062   HGF activator preproprotein 
MRC2                  0.056   mannose receptor, C type 2 
MRC1                  0.056   mannose receptor C type 1 precursor 
MRC1L1                0.056   mannose receptor, C type 1-like 1 
LY75                  0.044   lymphocyte antigen 75 
CFHR4                 0.010   complement factor H-related 4 
CFHR3                 0.008   complement factor H-related 3 
THBS1                 0.006   thrombospondin 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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