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Search of human proteins with 189217863
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|189217863 histidine triad nucleotide binding protein 3 [Homo
sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189217863 histidine triad nucleotide binding protein 3 [Homo ... 379 e-106
gi|28329436 aprataxin isoform a [Homo sapiens] 59 3e-09
gi|28329433 aprataxin isoform c [Homo sapiens] 59 3e-09
gi|28329427 aprataxin isoform d [Homo sapiens] 59 3e-09
gi|28329430 aprataxin isoform b [Homo sapiens] 59 3e-09
gi|8923156 aprataxin isoform d [Homo sapiens] 59 3e-09
gi|4885413 histidine triad nucleotide binding protein 1 [Homo sa... 49 3e-06
gi|14211923 PKCI-1-related HIT protein [Homo sapiens] 47 7e-06
gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precurs... 30 0.88
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs... 30 0.88
gi|4503719 fragile histidine triad gene [Homo sapiens] 30 1.1
gi|52353324 olfactory receptor, family 52, subfamily A, member 5... 30 1.5
gi|103472031 family with sequence similarity 62 (C2 domain conta... 28 3.3
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens] 28 3.3
gi|157694526 Fc receptor-like 5 [Homo sapiens] 28 4.4
gi|55743118 RAB3 GTPase-activating protein [Homo sapiens] 28 4.4
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 28 5.7
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa... 27 7.4
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa... 27 7.4
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa... 27 7.4
gi|121949771 cancer/testis antigen family 47, member A4 [Homo sa... 27 7.4
gi|121949796 cancer/testis antigen family 47, member A5 [Homo sa... 27 7.4
gi|121949794 cancer/testis antigen family 47, member A6 [Homo sa... 27 7.4
gi|121949792 cancer/testis antigen family 47, member A7 [Homo sa... 27 7.4
gi|121949790 cancer/testis antigen family 47, member A8 [Homo sa... 27 7.4
gi|121949788 cancer/testis antigen family 47, member A9 [Homo sa... 27 7.4
gi|121949786 cancer/testis antigen family 47, member A10 [Homo s... 27 7.4
gi|122114660 cancer/testis antigen family 47, member A11 [Homo s... 27 7.4
gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens] 27 9.7
gi|4506787 IQ motif containing GTPase activating protein 1 [Homo... 27 9.7
>gi|189217863 histidine triad nucleotide binding protein 3 [Homo
sapiens]
Length = 182
Score = 379 bits (974), Expect = e-106
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MAEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYDSTCVFCRIAGRQDPG 60
MAEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYDSTCVFCRIAGRQDPG
Sbjct: 1 MAEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYDSTCVFCRIAGRQDPG 60
Query: 61 TELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILER 120
TELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILER
Sbjct: 61 TELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILER 120
Query: 121 NNFTDFTNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLSKLVYRVNSYWFITADHLIEKL 180
NNFTDFTNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLSKLVYRVNSYWFITADHLIEKL
Sbjct: 121 NNFTDFTNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLSKLVYRVNSYWFITADHLIEKL 180
Query: 181 RT 182
RT
Sbjct: 181 RT 182
>gi|28329436 aprataxin isoform a [Homo sapiens]
Length = 342
Score = 58.5 bits (140), Expect = 3e-09
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 57 QDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKT 116
QDP ++ ++E ++ KD P A +H+LV+P I + + + ++ +EL+++M TVG+
Sbjct: 176 QDPKMQVY--KDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEK 233
Query: 117 ILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA 150
++ + R+G+H P S+SH+HLHV++
Sbjct: 234 VIVDFAGSSKLRFRLGYHAIP--SMSHVHLHVIS 265
>gi|28329433 aprataxin isoform c [Homo sapiens]
Length = 254
Score = 58.5 bits (140), Expect = 3e-09
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 57 QDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKT 116
QDP ++ ++E ++ KD P A +H+LV+P I + + + ++ +EL+++M TVG+
Sbjct: 88 QDPKMQVY--KDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEK 145
Query: 117 ILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA 150
++ + R+G+H P S+SH+HLHV++
Sbjct: 146 VIVDFAGSSKLRFRLGYHAIP--SMSHVHLHVIS 177
>gi|28329427 aprataxin isoform d [Homo sapiens]
Length = 168
Score = 58.5 bits (140), Expect = 3e-09
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 57 QDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKT 116
QDP ++ ++E ++ KD P A +H+LV+P I + + + ++ +EL+++M TVG+
Sbjct: 2 QDPKMQVY--KDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEK 59
Query: 117 ILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA 150
++ + R+G+H P S+SH+HLHV++
Sbjct: 60 VIVDFAGSSKLRFRLGYHAIP--SMSHVHLHVIS 91
>gi|28329430 aprataxin isoform b [Homo sapiens]
Length = 306
Score = 58.5 bits (140), Expect = 3e-09
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 57 QDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKT 116
QDP ++ ++E ++ KD P A +H+LV+P I + + + ++ +EL+++M TVG+
Sbjct: 190 QDPKMQVY--KDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEK 247
Query: 117 ILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA 150
++ + R+G+H P S+SH+HLHV++
Sbjct: 248 VIVDFAGSSKLRFRLGYHAIP--SMSHVHLHVIS 279
>gi|8923156 aprataxin isoform d [Homo sapiens]
Length = 168
Score = 58.5 bits (140), Expect = 3e-09
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 57 QDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKT 116
QDP ++ ++E ++ KD P A +H+LV+P I + + + ++ +EL+++M TVG+
Sbjct: 2 QDPKMQVY--KDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEK 59
Query: 117 ILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA 150
++ + R+G+H P S+SH+HLHV++
Sbjct: 60 VIVDFAGSSKLRFRLGYHAIP--SMSHVHLHVIS 91
>gi|4885413 histidine triad nucleotide binding protein 1 [Homo
sapiens]
Length = 126
Score = 48.5 bits (114), Expect = 3e-06
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 49 VFCRIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVE 108
+F +I ++ P + E++ + F DI P A H+LV+PKKHI D L+
Sbjct: 18 IFGKIIRKEIPAKIIF--EDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLG 75
Query: 109 NMVTVGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVL 149
+++ VGK + + S+ H+HLHVL
Sbjct: 76 HLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL 116
>gi|14211923 PKCI-1-related HIT protein [Homo sapiens]
Length = 163
Score = 47.4 bits (111), Expect = 7e-06
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 49 VFCRIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVE 108
+F RI + P L E++ + F+D+ P A H+LV+PKK I ++ +L+
Sbjct: 55 IFSRILDKSLPADILY--EDQQCLVFRDVAPQAPVHFLVIPKKPIPRISQAEEEDQQLLG 112
Query: 109 NMVTVGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVL 149
+++ V K + D + + S+ HLH+HVL
Sbjct: 113 HLLLVAKQTAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVL 153
>gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precursor
[Homo sapiens]
Length = 803
Score = 30.4 bits (67), Expect = 0.88
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 52 RIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMV 111
+I+ PGT + D DI +Y + P H + D + E ++
Sbjct: 141 QISESAQPGTRFILGSAHDA----DIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEMVL 196
Query: 112 TVGKTILERNNFTDF--TNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLSKLVYRVN 166
KT L+R + T + F PP S + +H+ V D S+ VYRV+
Sbjct: 197 ---KTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVS 250
>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 30.4 bits (67), Expect = 0.88
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 52 RIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMV 111
+I+ PGT + D DI +Y + P H + D + E ++
Sbjct: 141 QISESAQPGTRFILGSAHDA----DIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEMVL 196
Query: 112 TVGKTILERNNFTDF--TNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLSKLVYRVN 166
KT L+R + T + F PP S + +H+ V D S+ VYRV+
Sbjct: 197 ---KTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVS 250
>gi|4503719 fragile histidine triad gene [Homo sapiens]
Length = 147
Score = 30.0 bits (66), Expect = 1.1
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 78 KPAATHHYLVVPKKHIGNCRTLRKDQV-ELVENMVTVGKTILERNNFTDFTNVRMGFHMP 136
KP H LV P + + LR D+V +L + VG T++E++ M
Sbjct: 29 KPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVG-TVVEKHFHGTSLTFSMQDGPE 87
Query: 137 PFCSISHLHLHVL 149
++ H+H+HVL
Sbjct: 88 AGQTVKHVHVHVL 100
>gi|52353324 olfactory receptor, family 52, subfamily A, member 5
[Homo sapiens]
Length = 316
Score = 29.6 bits (65), Expect = 1.5
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 123 FTDFTNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLSKLVYRVNSYWFITADHLIE 178
F F R G H+PP+ I +L++L P FL+ +VY V + DH+++
Sbjct: 259 FFSFFTHRFGSHIPPYIHILLSNLYLLVP----PFLNPIVYGVKTKQI--RDHIVK 308
>gi|103472031 family with sequence similarity 62 (C2 domain
containing), member C [Homo sapiens]
Length = 886
Score = 28.5 bits (62), Expect = 3.3
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 19 SATAETTVSSVGTCEAAGKSPEPKDYDSTCVFCR-IAGRQDPGTELL 64
+ T+ TTV++ T + G PEPK DS FC I ++ P T L
Sbjct: 646 TTTSATTVATEPTSQETG--PEPKGKDSAKRFCEPIGEKKSPATIFL 690
>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
Length = 1159
Score = 28.5 bits (62), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 29 VGTCEAAGKSPEPKDYDSTCVFCRI-----AGRQDPG 60
+G C AAG+SPEP R+ AGR +PG
Sbjct: 43 LGACGAAGRSPEPGRLGPHAQLTRVPRSPPAGRAEPG 79
>gi|157694526 Fc receptor-like 5 [Homo sapiens]
Length = 977
Score = 28.1 bits (61), Expect = 4.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 111 VTVGKTILERNNFTDFTNVRMGFHMPPFC 139
VT+ TI + +N F N R FH+P C
Sbjct: 129 VTLNNTIYKNDNVLAFLNKRTDFHIPHAC 157
>gi|55743118 RAB3 GTPase-activating protein [Homo sapiens]
Length = 981
Score = 28.1 bits (61), Expect = 4.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Query: 67 ENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMV 111
E D I F D K + THHYLV T ++ + EL+E++V
Sbjct: 60 EKSDEISFADFKFSVTHHYLVQES-------TDKEGKDELLEDVV 97
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 27.7 bits (60), Expect = 5.7
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 32 CEAAGKSPEPKDYDSTCV----FCRIAGRQDPGTE-LLHCE 67
C + P P+ +D+ C FC + GR+ G++ LL CE
Sbjct: 1229 CLEEAERPLPQHHDTWCCRRCKFCHVCGRKGRGSKHLLECE 1269
>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949771 cancer/testis antigen family 47, member A4 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949796 cancer/testis antigen family 47, member A5 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949794 cancer/testis antigen family 47, member A6 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949792 cancer/testis antigen family 47, member A7 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949790 cancer/testis antigen family 47, member A8 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949788 cancer/testis antigen family 47, member A9 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|121949786 cancer/testis antigen family 47, member A10 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|122114660 cancer/testis antigen family 47, member A11 [Homo
sapiens]
Length = 288
Score = 27.3 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 AEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYD 45
AEE+++ A PD E AT E T E KS +P+ +D
Sbjct: 216 AEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKS-QPEKWD 258
>gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens]
Length = 1162
Score = 26.9 bits (58), Expect = 9.7
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 11 GLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYDSTCVFCRIAGRQDPGTELLHCENED 70
GL C + + + T++ + + + S + +D C A R+D L H E E
Sbjct: 406 GLGKTCRSLPSLKKTLAGDSSSDCSRGSHNGQVWDPQC-----APRKDRQVHLTHFELEG 460
Query: 71 LICFKDIKPAATHHYLVVP 89
L C D + H VP
Sbjct: 461 LRCLVDKLESLPLHKKCVP 479
>gi|4506787 IQ motif containing GTPase activating protein 1 [Homo
sapiens]
Length = 1657
Score = 26.9 bits (58), Expect = 9.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 65 HCENEDLICFKDIKPAATHHYLVVPKKH 92
H EN + I + DI+ H LVV ++H
Sbjct: 509 HAENNEFITWNDIQACVDHVNLVVQEEH 536
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,373,215
Number of Sequences: 37866
Number of extensions: 327470
Number of successful extensions: 742
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 719
Number of HSP's gapped (non-prelim): 30
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.