BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens] (321 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens] 632 0.0 gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens] 615 e-176 gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo sa... 572 e-163 gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo sa... 572 e-163 gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo sa... 298 4e-81 gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo sa... 297 1e-80 gi|156627565 Rh-associated glycoprotein [Homo sapiens] 204 9e-53 gi|7706683 Rh family, C glycoprotein [Homo sapiens] 193 2e-49 gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens] 179 2e-45 gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo... 32 0.58 gi|153791761 RMI1, RecQ mediated genome instability 1, homolog [... 30 2.2 gi|5174593 melatonin receptor 1A [Homo sapiens] 30 3.7 gi|197304729 cytochrome b-561 domain containing 1 isoform 3 [Hom... 30 3.7 gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Hom... 30 3.7 gi|32698982 cytochrome b-561 domain containing 1 isoform 2 [Homo... 30 3.7 gi|38569457 solute carrier family 12, member 8 [Homo sapiens] 29 4.9 gi|153791662 coiled-coil domain containing 71 [Homo sapiens] 29 4.9 gi|7705505 transmembrane protein 138 [Homo sapiens] 28 8.4 >gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens] Length = 321 Score = 632 bits (1631), Expect = 0.0 Identities = 321/321 (100%), Positives = 321/321 (100%) Query: 1 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI 60 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI Sbjct: 1 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI 60 Query: 61 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA 120 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA Sbjct: 61 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA 120 Query: 121 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG 180 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG Sbjct: 121 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG 180 Query: 181 LSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFN 240 LSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFN Sbjct: 181 LSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFN 240 Query: 241 TYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 TYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV Sbjct: 241 TYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 Query: 301 AGLISVGGAKYLPFPHLAVGF 321 AGLISVGGAKYLPFPHLAVGF Sbjct: 301 AGLISVGGAKYLPFPHLAVGF 321 >gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens] Length = 417 Score = 615 bits (1586), Expect = e-176 Identities = 313/313 (100%), Positives = 313/313 (100%) Query: 1 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI 60 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI Sbjct: 1 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI 60 Query: 61 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA 120 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA Sbjct: 61 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA 120 Query: 121 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG 180 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG Sbjct: 121 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG 180 Query: 181 LSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFN 240 LSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFN Sbjct: 181 LSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFN 240 Query: 241 TYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 TYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV Sbjct: 241 TYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 Query: 301 AGLISVGGAKYLP 313 AGLISVGGAKYLP Sbjct: 301 AGLISVGGAKYLP 313 >gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo sapiens] Length = 354 Score = 572 bits (1473), Expect = e-163 Identities = 290/313 (92%), Positives = 300/313 (95%) Query: 1 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI 60 MSSKYPRSVRRCLPL ALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAA+ Sbjct: 1 MSSKYPRSVRRCLPLCALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAL 60 Query: 61 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA 120 GLGFLTS+FRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFP GKVVITLFSIRLATMSA Sbjct: 61 GLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSA 120 Query: 121 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG 180 +SVLIS AVLGKVNLAQLVVMVLVEVTALG LRMVISNIFNTDYHMN+ H YVFAAYFG Sbjct: 121 MSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTDYHMNLRHFYVFAAYFG 180 Query: 181 LSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFN 240 L+VAWCLPKPLP+GTED DQ ATIPSLSAMLGALFLWMFWPS NSALLRSPI+RKNA+FN Sbjct: 181 LTVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQRKNAMFN 240 Query: 241 TYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 TYYA+AVSVVTAISGSSLAHPQ KIS TYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV Sbjct: 241 TYYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 Query: 301 AGLISVGGAKYLP 313 AGLIS+GGAK LP Sbjct: 301 AGLISIGGAKCLP 313 >gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo sapiens] Length = 417 Score = 572 bits (1473), Expect = e-163 Identities = 290/313 (92%), Positives = 300/313 (95%) Query: 1 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI 60 MSSKYPRSVRRCLPL ALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAA+ Sbjct: 1 MSSKYPRSVRRCLPLCALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAL 60 Query: 61 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA 120 GLGFLTS+FRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFP GKVVITLFSIRLATMSA Sbjct: 61 GLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSA 120 Query: 121 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG 180 +SVLIS AVLGKVNLAQLVVMVLVEVTALG LRMVISNIFNTDYHMN+ H YVFAAYFG Sbjct: 121 MSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTDYHMNLRHFYVFAAYFG 180 Query: 181 LSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFN 240 L+VAWCLPKPLP+GTED DQ ATIPSLSAMLGALFLWMFWPS NSALLRSPI+RKNA+FN Sbjct: 181 LTVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQRKNAMFN 240 Query: 241 TYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 TYYA+AVSVVTAISGSSLAHPQ KIS TYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV Sbjct: 241 TYYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 Query: 301 AGLISVGGAKYLP 313 AGLIS+GGAK LP Sbjct: 301 AGLISIGGAKCLP 313 >gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo sapiens] Length = 267 Score = 298 bits (763), Expect = 4e-81 Identities = 156/166 (93%), Positives = 159/166 (95%) Query: 1 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI 60 MSSKYPRSVRRCLPL ALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAA+ Sbjct: 1 MSSKYPRSVRRCLPLCALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAL 60 Query: 61 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA 120 GLGFLTS+FRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFP GKVVITLFSIRLATMSA Sbjct: 61 GLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSA 120 Query: 121 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYH 166 +SVLIS AVLGKVNLAQLVVMVLVEVTALG LRMVISNIFNT H Sbjct: 121 MSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTYVH 166 Score = 93.2 bits (230), Expect = 3e-19 Identities = 49/74 (66%), Positives = 54/74 (72%) Query: 240 NTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGL 299 N V + +V + +L I TYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGL Sbjct: 135 NLAQLVVMVLVEVTALGTLRMVISNIFNTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGL 194 Query: 300 VAGLISVGGAKYLP 313 VAGLIS+GGAK LP Sbjct: 195 VAGLISIGGAKCLP 208 >gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo sapiens] Length = 266 Score = 297 bits (760), Expect = 1e-80 Identities = 159/183 (86%), Positives = 166/183 (90%), Gaps = 2/183 (1%) Query: 1 MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAI 60 MSSKYPRSVRRCLPL ALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAA+ Sbjct: 1 MSSKYPRSVRRCLPLCALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAL 60 Query: 61 GLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSA 120 GLGFLTS+FRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFP GKVVITLFSIRLATMSA Sbjct: 61 GLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSA 120 Query: 121 LSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNT--DYHMNMMHIYVFAAY 178 +SVLIS AVLGKVNLAQLVVMVLVEVTALG LRMVISNIFN + + + HI V + Sbjct: 121 MSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNVCCNRVLGIHHISVMHSI 180 Query: 179 FGL 181 F L Sbjct: 181 FSL 183 >gi|156627565 Rh-associated glycoprotein [Homo sapiens] Length = 409 Score = 204 bits (519), Expect = 9e-53 Identities = 118/315 (37%), Positives = 184/315 (58%), Gaps = 12/315 (3%) Query: 9 VRRCLPLWALTLEAALILLFYFFTHY--DASLEDQKGLVASYQVG---------QDLTVM 57 +R PL A+ LE A+I+LF F Y D ++ +Q + +G QD+ VM Sbjct: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60 Query: 58 AAIGLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLAT 117 +G GFL + +++ +SSV NL + ALG+QW ++ G L Q K I + ++ A Sbjct: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGIL-QSQGQKFNIGIKNMINAD 119 Query: 118 MSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAA 177 SA +VLIS AVLGK + Q+++M ++E+ + ++S IF M I+ F A Sbjct: 120 FSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGA 179 Query: 178 YFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNA 237 YFGL+VA L + + +++A L AM+G LFLWMFWPSFNSA+ ++ A Sbjct: 180 YFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRA 239 Query: 238 VFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVL 297 + NTY+++A V+TA + SSL +GK++ ++ +A LAGGVAVGT + P+ +M++ Sbjct: 240 IVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMII 299 Query: 298 GLVAGLISVGGAKYL 312 G +AG++SV G K+L Sbjct: 300 GSIAGMVSVLGYKFL 314 >gi|7706683 Rh family, C glycoprotein [Homo sapiens] Length = 479 Score = 193 bits (490), Expect = 2e-49 Identities = 111/322 (34%), Positives = 176/322 (54%), Gaps = 15/322 (4%) Query: 8 SVRRCLPLWALTLEAALILLFYFFTHYD-------------ASLEDQKG-LVASYQVGQD 53 ++R LPL L L+ +++LF F YD +L D + Y QD Sbjct: 6 NLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQD 65 Query: 54 LTVMAAIGLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSI 113 + VM +G GFL + +R+ +S+V FN + A G+QWA+L+ G+ +V+ + ++ Sbjct: 66 VHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENL 125 Query: 114 RLATMSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIY 173 A SV ++ AVLGKV+ QL++M +VT ++ N+ M I+ Sbjct: 126 INADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIH 185 Query: 174 VFAAYFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIE 233 F AYFGL+V L + E ++++ + L AM+G LFLWM+WPSFNSA+ Sbjct: 186 TFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDS 245 Query: 234 RKNAVFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWL 293 + A NTY ++A V+T+++ SS H +GK+ ++ +A LAGGVAVGT+ ++ P+ Sbjct: 246 QHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYG 305 Query: 294 AMVLGLVAGLISVGGAKYL-PF 314 A+++G V G+IS G YL PF Sbjct: 306 ALIIGFVCGIISTLGFVYLTPF 327 >gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens] Length = 458 Score = 179 bits (455), Expect = 2e-45 Identities = 108/310 (34%), Positives = 163/310 (52%), Gaps = 11/310 (3%) Query: 13 LPLWALTLEAALILLFYFFTHY----DASLEDQKG-------LVASYQVGQDLTVMAAIG 61 LPL L L+ A +LF F Y DA+L + Y QD+ M +G Sbjct: 15 LPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQDVHAMVFVG 74 Query: 62 LGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSAL 121 GFL +R+ +SSV F + A +QW+ L+ GFL F G + + + S+ A A Sbjct: 75 FGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINADFCAG 134 Query: 122 SVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFGL 181 +VLIS AVLGK QL++M L+EV G V+ ++ M I+ F AYFGL Sbjct: 135 AVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFGAYFGL 194 Query: 182 SVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNT 241 ++ L +P E ++ + + L AM+G +FLW+FWPSFN+AL + NT Sbjct: 195 VLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHRTALNT 254 Query: 242 YYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLVA 301 YY++A S + + S+L G++ ++ +A LAGGV VGTS ++ +P+ A+ G +A Sbjct: 255 YYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALAAGFLA 314 Query: 302 GLISVGGAKY 311 G +S G K+ Sbjct: 315 GTVSTLGYKF 324 >gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo sapiens] Length = 311 Score = 32.3 bits (72), Expect = 0.58 Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 14/170 (8%) Query: 18 LTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAIGLGFLTSSFRRHSWSSV 77 L + A+I +F F A + VA Y V + V+ + L RR W+ + Sbjct: 110 LLITVAIIAIFTFVEPVSAFVRRN---VAVYYVSYAVFVVTYLILACCQGPRRRFPWNII 166 Query: 78 AFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSALSVLISVDAVLGKVNLA 137 LF A+G + G +S K VI I + + +S+ +++ KV+ Sbjct: 167 LLTLFTFAMG-----FMTGTISSMYQTKAVI----IAMIITAVVSISVTIFCFQTKVDFT 217 Query: 138 QL--VVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFGLSVAW 185 + VL V + + I F Y ++M++ + A F L +A+ Sbjct: 218 SCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYAALGAICFTLFLAY 267 >gi|153791761 RMI1, RecQ mediated genome instability 1, homolog [Homo sapiens] Length = 625 Score = 30.4 bits (67), Expect = 2.2 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 12/91 (13%) Query: 232 IERKNAVFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSP 291 +E N +YA+ ++ + +S + + Q K + V A + P P Sbjct: 74 LEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTA-------EAQVTPKP 126 Query: 292 WLA-----MVLGLVAGLISVGGAKYLPFPHL 317 W A ++L L G++ + G +Y P P L Sbjct: 127 WEAKPSRMLMLQLTDGIVQIQGMEYQPIPIL 157 >gi|5174593 melatonin receptor 1A [Homo sapiens] Length = 350 Score = 29.6 bits (65), Expect = 3.7 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%) Query: 99 SQFPSGKVVITLFSIRLATMSALSVLISVDAVLGKVNLAQLVVMVLVE---VTALGNLRM 155 S S + +F+I + + L V++SV N + V+ L V A+ + Sbjct: 24 SWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPL 83 Query: 156 VISNIFNTDYHMNMMHIYVFAAYFGLSV 183 V+ +IFN +++ +H V GLSV Sbjct: 84 VLMSIFNNGWNLGYLHCQVSGFLMGLSV 111 >gi|197304729 cytochrome b-561 domain containing 1 isoform 3 [Homo sapiens] Length = 172 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Query: 41 QKGLVASYQVGQDLTVM-AAIGLGFLTSSFRRH------SWSSVAFNLFMLALGVQ 89 +K + + GQ L ++ AA+GLGF+ SS R SW S L +LA VQ Sbjct: 29 RKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQ 84 >gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Homo sapiens] Length = 251 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Query: 41 QKGLVASYQVGQDLTVM-AAIGLGFLTSSFRRH------SWSSVAFNLFMLALGVQ 89 +K + + GQ L ++ AA+GLGF+ SS R SW S L +LA VQ Sbjct: 108 RKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQ 163 >gi|32698982 cytochrome b-561 domain containing 1 isoform 2 [Homo sapiens] Length = 229 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Query: 41 QKGLVASYQVGQDLTVM-AAIGLGFLTSSFRRH------SWSSVAFNLFMLALGVQ 89 +K + + GQ L ++ AA+GLGF+ SS R SW S L +LA VQ Sbjct: 86 RKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQ 141 >gi|38569457 solute carrier family 12, member 8 [Homo sapiens] Length = 714 Score = 29.3 bits (64), Expect = 4.9 Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 37/193 (19%) Query: 30 FFTHYDASLEDQKGLVASYQVGQDLTVMAA-IGLGFLTSSFRRHSWSSVAFNLFML-ALG 87 FFT + G++A + +G DL AA I LG L + SW +F+L A+ Sbjct: 233 FFTVFGVFFPAATGVMAGFNMGGDLREPAASIPLGSLAAV--GISWFLYIVFVFLLGAIC 290 Query: 88 VQWAILLDGFLSQ--------FPSGKVVITLFSI--------RLATMSALSVLISVDAVL 131 + A+ D +++ F G + +L S R+ A +I A L Sbjct: 291 TREALRYDFLIAEKVSLMGFLFLLGLYISSLASCMGGLYGAPRILQCIAQEKVIPALACL 350 Query: 132 GK-----------VNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFG 180 G+ + L LV M V V + L +++ F Y + V +YF Sbjct: 351 GQGKGPNKTPVAAICLTSLVTMAFVFVGQVNVLAPIVTINFMLTY------VAVDYSYFS 404 Query: 181 LSVAWCLPKPLPE 193 LS+ C P+PE Sbjct: 405 LSMCSCSLTPVPE 417 >gi|153791662 coiled-coil domain containing 71 [Homo sapiens] Length = 467 Score = 29.3 bits (64), Expect = 4.9 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 15/100 (15%) Query: 201 TATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNTYYAVAVSVVTAISGSSLAH 260 TAT P SA A+ L P+ + LL P+ + A +T A+A T + SSL Sbjct: 94 TATSPPASAPRTAMRL----PAGRATLLPMPLSGRLAKASTP-ALAKHATTNLLLSSLKQ 148 Query: 261 PQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLV 300 SA A G AVG HL P + AM L +V Sbjct: 149 S----------SASHARGAAVGFPTHLYPGVYPAMRLSVV 178 >gi|7705505 transmembrane protein 138 [Homo sapiens] Length = 162 Score = 28.5 bits (62), Expect = 8.4 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 10/85 (11%) Query: 110 LFSIRLATMSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTD----- 164 + S++ +S + S +L K + QLV+ ++ ++ L N+ ++ FNT Sbjct: 10 VLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMFFNTFVFQAG 69 Query: 165 -----YHMNMMHIYVFAAYFGLSVA 184 +H I + A YF LS++ Sbjct: 70 LVNLLFHKFKGTIILTAVYFALSIS 94 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.137 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,489,994 Number of Sequences: 37866 Number of extensions: 414538 Number of successful extensions: 1152 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 1135 Number of HSP's gapped (non-prelim): 22 length of query: 321 length of database: 18,247,518 effective HSP length: 102 effective length of query: 219 effective length of database: 14,385,186 effective search space: 3150355734 effective search space used: 3150355734 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.