Guide to the Human Genome
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Search of human proteins with 188595672

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]
         (630 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens]      1269   0.0  
gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens]      1269   0.0  
gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens]      1269   0.0  
gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens]      1269   0.0  
gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens]      1269   0.0  
gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]      1269   0.0  
gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens]      1269   0.0  
gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]      476   e-134
gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [H...   262   8e-70
gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform ...   261   1e-69
gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [H...   251   2e-66
gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform...   246   4e-65
gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo s...   246   5e-65
gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo sa...   246   5e-65
gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo s...   246   5e-65
gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo sap...   246   5e-65
gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo sa...   246   5e-65
gi|4503023 carnitine O-palmitoyltransferase precursor [Homo sapi...   243   5e-64
gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo s...   229   8e-60
gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo s...   224   2e-58
gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo sa...   223   3e-58
gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo s...   150   3e-36
gi|153791514 tripartite motif-containing 32 [Homo sapiens]             36   0.094
gi|153792582 tripartite motif-containing 32 [Homo sapiens]             36   0.094
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         33   0.61 
gi|170932518 paxillin isoform 3 [Homo sapiens]                         32   1.8  
gi|170932516 paxillin isoform 2 [Homo sapiens]                         32   1.8  
gi|170932514 paxillin isoform 1 [Homo sapiens]                         32   1.8  
gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s...    30   6.7  
gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo s...    30   6.7  

>gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 630/630 (100%), Positives = 630/630 (100%)

Query: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
           MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60

Query: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
           LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120

Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
           ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180

Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
           PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240

Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
           SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300

Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
           NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360

Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
           APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420

Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
           LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480

Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
           LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540

Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
           QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600

Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
           RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630


>gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 630/630 (100%), Positives = 630/630 (100%)

Query: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
           MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60

Query: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
           LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120

Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
           ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180

Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
           PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240

Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
           SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300

Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
           NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360

Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
           APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420

Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
           LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480

Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
           LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540

Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
           QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600

Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
           RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630


>gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens]
          Length = 666

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 630/630 (100%), Positives = 630/630 (100%)

Query: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
           MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 37  MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 96

Query: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
           LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 97  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 156

Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
           ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 157 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 216

Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
           PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 217 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 276

Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
           SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 277 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 336

Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
           NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 337 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 396

Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
           APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 397 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 456

Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
           LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 457 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 516

Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
           LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 517 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 576

Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
           QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 577 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 636

Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
           RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 637 RDLCSLLPPTESKPLATKEKATRPSQGHQP 666


>gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 630/630 (100%), Positives = 630/630 (100%)

Query: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
           MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60

Query: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
           LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120

Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
           ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180

Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
           PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240

Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
           SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300

Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
           NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360

Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
           APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420

Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
           LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480

Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
           LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540

Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
           QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600

Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
           RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630


>gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 630/630 (100%), Positives = 630/630 (100%)

Query: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
           MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60

Query: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
           LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120

Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
           ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180

Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
           PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240

Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
           SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300

Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
           NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360

Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
           APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420

Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
           LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480

Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
           LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540

Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
           QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600

Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
           RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630


>gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 630/630 (100%), Positives = 630/630 (100%)

Query: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
           MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60

Query: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
           LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120

Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
           ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180

Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
           PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240

Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
           SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300

Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
           NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360

Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
           APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420

Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
           LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480

Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
           LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540

Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
           QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600

Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
           RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630


>gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens]
          Length = 748

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 630/630 (100%), Positives = 630/630 (100%)

Query: 1   MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
           MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 119 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 178

Query: 61  LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
           LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 179 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 238

Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
           ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 239 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 298

Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
           PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 299 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 358

Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
           SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 359 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 418

Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
           NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 419 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 478

Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
           APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 479 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 538

Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
           LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 539 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 598

Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
           LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 599 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 658

Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
           QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 659 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 718

Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
           RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 719 RDLCSLLPPTESKPLATKEKATRPSQGHQP 748


>gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]
          Length = 626

 Score =  476 bits (1224), Expect = e-134
 Identities = 258/605 (42%), Positives = 382/605 (63%), Gaps = 16/605 (2%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           + +  LP+LPVPPLQQ+L  YL+ ++ +VSEE++  ++ +V +F A GG+GE LQ+ L  
Sbjct: 30  AHQDALPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLER 89

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           R  KT NW+SE+WL   YL  R  + + SSP V+  +Q F     QLRFAA LI GVL +
Sbjct: 90  RARKTENWLSEWWLKTAYLQYRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDF 149

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           K ++D+ ++P +     L G+PLCM QYY + SS R+PG  QDT V+  S     P H+ 
Sbjct: 150 KVMIDNETLPVE----YLGGKPLCMNQYYQILSSCRVPGPKQDT-VSNFSKTKKPPTHIT 204

Query: 188 VACCNQFFVLDVV-INFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEA 246
           V    QFF LDV   +   L+   +F QL KI   +   ++   P+G+LTS+ R+ WA+A
Sbjct: 205 VVHNYQFFELDVYHSDGTPLTADQIFVQLEKIWNSSLQTNKE--PVGILTSNHRNSWAKA 262

Query: 247 RTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHR---ALQLLHGGGYSKNGANRW 303
              L+KD  NRDS+  I++ I  VCLDA       D +R   A Q+LHGGG   N  NRW
Sbjct: 263 YNTLIKDKVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRW 322

Query: 304 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAPR 363
           +DK+LQF+V  DG+CG+V EH+  +G  +V   ++++++  +   +L+R+  V  LP P+
Sbjct: 323 FDKTLQFIVAEDGSCGLVYEHAAAEGPPIVTLLDYVIEYTKKP--ELVRSPMV-PLPMPK 379

Query: 364 RLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQL 423
           +LR+  +PEI+  +  + + L  ++++LD  V  F ++GK F K +K SPDAFIQ+ALQL
Sbjct: 380 KLRFNITPEIKSDIEKAKQNLSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQMALQL 439

Query: 424 AFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLLK 483
           A+YR++ +   TYESAS+R F  GR D IRSA+ ++L FV+A+ D  ++V   +K+ LL+
Sbjct: 440 AYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMDD--SSVTEHQKVELLR 497

Query: 484 DAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQVP 543
            A++A   YT  AI G A D HLL L+  A      +P++FMD +Y ++  F LSTSQVP
Sbjct: 498 KAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFHLSTSQVP 557

Query: 544 TTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
             T+    +GPVVP+GYG CYNP    I F +S+++SC ET++++ A  +E++L+DMR L
Sbjct: 558 AKTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRAL 617

Query: 604 CSLLP 608
               P
Sbjct: 618 LQSHP 622


>gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [Homo
           sapiens]
          Length = 773

 Score =  262 bits (669), Expect = 8e-70
 Identities = 197/623 (31%), Positives = 304/623 (48%), Gaps = 45/623 (7%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S ++ LP+LPVP ++ T+  YLQ +R L+ EE F++  A+ Q F    GLG  LQ  L  
Sbjct: 166 SFQTSLPRLPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAV--GLGPRLQWYLKL 223

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +     N+VS++W   +YL  R  L VNS+   +      P T  Q   A + I  +L Y
Sbjct: 224 KSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYILP-THIQAARAGNAIHAILLY 282

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  LD   I      G  S  PLC  Q+  +F++ R+PG   DT+       M + +H++
Sbjct: 283 RRKLDREEIKPIRLLG--STIPLCSAQWERMFNTSRIPGEETDTI-----QHMRDSKHIV 335

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    ++F + +  + R L   ++  Q+++I+   S        +  LT+  R  WA  R
Sbjct: 336 VYHRGRYFKVWLYHDGRLLKPREMEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCR 395

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLD-APGGVELSDTHRALQ-----LLHGGGYSKNGAN 301
                   N+ SLD +E+    V LD    G    D   ++      LLHG  Y     +
Sbjct: 396 QAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSLLHGRCY-----D 450

Query: 302 RWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVS 357
           RW+DKS  FVV ++G  G+  EHS  D  ++    E+++      +  +     + D   
Sbjct: 451 RWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINP 510

Query: 358 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFI 417
            +P P RL+W    E Q  + +S      +  ++DF  + F  +GK  IKK + SPDAF+
Sbjct: 511 NIPYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFV 570

Query: 418 QVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASE 477
           Q+ALQLA Y+   +   TYE++  R F+EGR + +RS T E+  FVRA+ D   A    +
Sbjct: 571 QLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVD--PAQTVEQ 628

Query: 478 KLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVL 537
           +L L K A         +A+TG  ID HL  L  +++ +  E P  F+ E  ++S  + L
Sbjct: 629 RLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVVSKYLAVESP--FLKE--VLSEPWRL 684

Query: 538 STSQVP-TTTEMFCC------------YGPVVPNGYGACYNPQPETIL-FCISSFHSCKE 583
           STSQ P    E+F              +GPV  +GYG  Y    E ++ F ISS  SC E
Sbjct: 685 STSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPE 744

Query: 584 TSSSKFAKAVEESLIDMRDLCSL 606
           T S +F + ++E++ D+  L  L
Sbjct: 745 TDSHRFGRHLKEAMTDIITLFGL 767


>gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform 2
           [Homo sapiens]
          Length = 612

 Score =  261 bits (668), Expect = 1e-69
 Identities = 182/604 (30%), Positives = 299/604 (49%), Gaps = 24/604 (3%)

Query: 10  ESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLERQ 69
           +  LP LPVP L+++L  YL+ ++   ++E+++K++ IVQ+F +  G+GE L QKLLER 
Sbjct: 17  QDSLPSLPVPSLEESLKKYLESVKPFANQEEYKKTEEIVQKFQS--GIGEKLHQKLLERA 74

Query: 70  EKTANWVSEYWLNDMYLNNRLALPVN---SSPAVIFARQHFPGTDDQLRFAASLISGVLS 126
           +   NW+ E+WLN  YL+ R+   +N   + PA  F     P    QL   +  +   L+
Sbjct: 75  KGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLN 134

Query: 127 YKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVA--QNSSIMPEPE 184
           Y  LL    +P      ++   PL M Q+  LFS+ ++PG T+D+++   +  S    P 
Sbjct: 135 YWQLLRKEKVPVH----KVGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPN 190

Query: 185 HVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWA 244
           H++V C  + FV DV+     ++  +L  QL  I K   +E +  P I  LTS+ R+ WA
Sbjct: 191 HIVVLCRGRAFVFDVIHEGCLVTPPELLRQLTYIHKKCHSEPDG-PGIAALTSEERTRWA 249

Query: 245 EARTVLVK-DSTNRDSLDMIERCICLVCL-DAPGGVELSDTHRALQLLHGGGYSKNGANR 302
           +AR  L+  D  N   L+ I+  + +  + D+   V   D    +  +  G    +   R
Sbjct: 250 KAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILIG----DPTVR 305

Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAP 362
           W DKS   +   +G  G  C+H+PFD +++V  + ++ + + Q+  +   ++ V ++P P
Sbjct: 306 WGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLP 365

Query: 363 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 422
             L +    ++   +  +  +  R   +L    Y F ++GK   K +   PD FIQ+ALQ
Sbjct: 366 EELIFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQ 425

Query: 423 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 482
           LA+YRLH      YE+A  R F  GR + +RS T EA+ + +++ D   +V   E+   +
Sbjct: 426 LAYYRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQSMQD--PSVNLRERQQKM 483

Query: 483 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMS---NRFVLST 539
             A             G   D HLL L  +A+     +PE+F D  +  S     FVLST
Sbjct: 484 LQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVPELFTDPLFSKSGGGGNFVLST 543

Query: 540 SQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLID 599
           S V           P+V NGYG  Y+ + +  +   S++ SC ET + K  +    +  D
Sbjct: 544 SLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRFVVACSAWKSCPETDAEKLVQLTFCAFHD 602

Query: 600 MRDL 603
           M  L
Sbjct: 603 MIQL 606


>gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [Homo
           sapiens]
          Length = 756

 Score =  251 bits (640), Expect = 2e-66
 Identities = 191/601 (31%), Positives = 291/601 (48%), Gaps = 45/601 (7%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S ++ LP+LPVP ++ T+  YLQ +R L+ EE F++  A+ Q F    GLG  LQ  L  
Sbjct: 166 SFQTSLPRLPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAV--GLGPRLQWYLKL 223

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +     N+VS++W   +YL  R  L VNS+   +      P T  Q   A + I  +L Y
Sbjct: 224 KSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYILP-THIQAARAGNAIHAILLY 282

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  LD   I      G  S  PLC  Q+  +F++ R+PG   DT+       M + +H++
Sbjct: 283 RRKLDREEIKPIRLLG--STIPLCSAQWERMFNTSRIPGEETDTI-----QHMRDSKHIV 335

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    ++F + +  + R L   ++  Q+++I+   S        +  LT+  R  WA  R
Sbjct: 336 VYHRGRYFKVWLYHDGRLLKPREMEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCR 395

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLD-APGGVELSDTHRALQ-----LLHGGGYSKNGAN 301
                   N+ SLD +E+    V LD    G    D   ++      LLHG  Y     +
Sbjct: 396 QAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSLLHGRCY-----D 450

Query: 302 RWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVS 357
           RW+DKS  FVV ++G  G+  EHS  D  ++    E+++      +  +     + D   
Sbjct: 451 RWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINP 510

Query: 358 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFI 417
            +P P RL+W    E Q  + +S      +  ++DF  + F  +GK  IKK + SPDAF+
Sbjct: 511 NIPYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFV 570

Query: 418 QVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASE 477
           Q+ALQLA Y+   +   TYE++  R F+EGR + +RS T E+  FVRA+ D   A    +
Sbjct: 571 QLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVD--PAQTVEQ 628

Query: 478 KLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVL 537
           +L L K A         +A+TG  ID HL  L  +++ +  E P  F+ E  ++S  + L
Sbjct: 629 RLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVVSKYLAVESP--FLKE--VLSEPWRL 684

Query: 538 STSQVP-TTTEMFCC------------YGPVVPNGYGACYNPQPETIL-FCISSFHSCKE 583
           STSQ P    E+F              +GPV  +GYG  Y    E ++ F ISS  SC E
Sbjct: 685 STSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPE 744

Query: 584 T 584
           T
Sbjct: 745 T 745


>gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform 1
           [Homo sapiens]
          Length = 640

 Score =  246 bits (629), Expect = 4e-65
 Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)

Query: 10  ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 41
           +  LP LPVP L+++L  YL+ +                            +   ++E++
Sbjct: 17  QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76

Query: 42  RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 98
           +K++ IVQ+F +  G+GE L QKLLER +   NW+ E+WLN  YL+ R+   +N   + P
Sbjct: 77  KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134

Query: 99  AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 158
           A  F     P    QL   +  +   L+Y  LL    +P      ++   PL M Q+  L
Sbjct: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190

Query: 159 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 216
           FS+ ++PG T+D+++   +  S    P H++V C  + FV DV+     ++  +L  QL 
Sbjct: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250

Query: 217 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 274
            I K   +E +  P I  LTS+ R+ WA+AR  L+  D  N   L+ I+  + +  + D+
Sbjct: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309

Query: 275 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 334
              V   D    +  +  G    +   RW DKS   +   +G  G  C+H+PFD +++V 
Sbjct: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365

Query: 335 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 394
            + ++ + + Q+  +   ++ V ++P P  L +    ++   +  +  +  R   +L   
Sbjct: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425

Query: 395 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 454
            Y F ++GK   K +   PD FIQ+ALQLA+YRLH      YE+A  R F  GR + +RS
Sbjct: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485

Query: 455 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 514
            T EA+ + +++ D   +V   E+   +  A             G   D HLL L  +A+
Sbjct: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543

Query: 515 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 571
                +PE+F D  +  S     FVLSTS V           P+V NGYG  Y+ + +  
Sbjct: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602

Query: 572 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
           +   S++ SC ET + K  +    +  DM  L
Sbjct: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634


>gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score =  246 bits (628), Expect = 5e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451

Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511

Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571

Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630

Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685

Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745

Query: 585 SSSKFAKAVEESLIDMRDL 603
           ++ +F   + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764


>gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score =  246 bits (628), Expect = 5e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451

Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511

Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571

Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630

Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685

Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745

Query: 585 SSSKFAKAVEESLIDMRDL 603
           ++ +F   + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764


>gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score =  246 bits (628), Expect = 5e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451

Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511

Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571

Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630

Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685

Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745

Query: 585 SSSKFAKAVEESLIDMRDL 603
           ++ +F   + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764


>gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score =  246 bits (628), Expect = 5e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451

Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511

Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571

Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630

Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685

Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745

Query: 585 SSSKFAKAVEESLIDMRDL 603
           ++ +F   + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764


>gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score =  246 bits (628), Expect = 5e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451

Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511

Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571

Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630

Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685

Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745

Query: 585 SSSKFAKAVEESLIDMRDL 603
           ++ +F   + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764


>gi|4503023 carnitine O-palmitoyltransferase precursor [Homo
           sapiens]
          Length = 658

 Score =  243 bits (619), Expect = 5e-64
 Identities = 184/629 (29%), Positives = 305/629 (48%), Gaps = 61/629 (9%)

Query: 10  ESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKL--LE 67
           +  LP+LP+P L+ T+  YL   + L+++ QFRK++   + F    G+G+ L ++L  L+
Sbjct: 46  QDSLPRLPIPKLEDTIRRYLSAQKPLLNDGQFRKTEQFCKSF--ENGIGKELHEQLVALD 103

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +Q K  +++S  W  DMYL+ R ++ +N +P + F        +DQL  A ++    + +
Sbjct: 104 KQNKHTSYISGPWF-DMYLSARDSVVLNFNPFMAFNPDPKSEYNDQLTRATNMTVSAIRF 162

Query: 128 -----KALLDSHSIPTDCAKGQ----------------------LSGQPLCMKQYYGLFS 160
                  LL+      + AK                        ++  PL M QY+ LF+
Sbjct: 163 LKTLRAGLLEPEVFHLNPAKSDTITFKRLIRFVPSSLSWYGAYLVNAYPLDMSQYFRLFN 222

Query: 161 SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRL-SEGDLFTQLRKIV 219
           S RLP  ++D L   + +      H++V     F++ DV+     + S  ++   L+ I+
Sbjct: 223 STRLPKPSRDELFTDDKA-----RHLLVLRKGNFYIFDVLDQDGNIVSPSEIQAHLKYIL 277

Query: 220 KMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVE 279
             +S   E   P+  LTS+ R  WAE R  L+  S N +SL  ++  +  +CLD     +
Sbjct: 278 SDSSPAPEF--PLAYLTSENRDIWAELRQKLMS-SGNEESLRKVDSAVFCLCLDDFPIKD 334

Query: 280 LSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHL 339
           L   H +  +LHG     +G NRW+DKS   ++ +DG+  V  EHS  DG+ +++    +
Sbjct: 335 L--VHLSHNMLHG-----DGTNRWFDKSFNLIIAKDGSTAVHFEHSWGDGVAVLRFFNEV 387

Query: 340 LKHMTQSSRKLIRAD--SVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYK 397
            K  TQ+     ++   +       ++L ++ +  ++  + ++ EK    +K L     +
Sbjct: 388 FKDSTQTPAVTPQSQPATTDSTVTVQKLNFELTDALKTGITAAKEKFDATMKTLTIDCVQ 447

Query: 398 FDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATP 457
           F   GK F+KKQK SPDA  Q+A Q+AF R + + V TYES S   F+ GR + IR A+ 
Sbjct: 448 FQRGGKEFLKKQKLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASV 507

Query: 458 E----ALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELA 513
                + AFVR  + H     A E   ++ +  +     T  A  G   D HL ALR LA
Sbjct: 508 YTKRCSEAFVREPSRHS----AGELQQMMVECSKYHGQLTKEAAMGQGFDRHLFALRHLA 563

Query: 514 RAMCKELPEMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILF 573
            A    LPE+++D  Y   N  VLSTS + +       + PVV +G+G  Y      I  
Sbjct: 564 AAKGIILPELYLDPAYGQINHNVLSTSTLSSPAVNLGGFAPVVSDGFGVGYAVHDNWIGC 623

Query: 574 CISSFHSCKETSSSKFAKAVEESLIDMRD 602
            +SS+      ++ +F + VE++L DM D
Sbjct: 624 NVSSYPG---RNAREFLQCVEKALEDMFD 649


>gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo
           sapiens]
          Length = 738

 Score =  229 bits (583), Expect = 8e-60
 Identities = 183/599 (30%), Positives = 293/599 (48%), Gaps = 45/599 (7%)

Query: 28  YLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLN 87
           YL+ +R L+ +E++ + + + ++F         LQ+ L+ +    +N+VS++W   +YL 
Sbjct: 154 YLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLR 211

Query: 88  NRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSG 147
            R  L VNS+  V+        TD Q     ++I  ++ Y+  LD   I    A G +  
Sbjct: 212 GRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIV-- 268

Query: 148 QPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRLS 207
            P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV V    +FF L +    R L 
Sbjct: 269 -PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVAVYHKGRFFKLWLYEGARLLK 322

Query: 208 EGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCI 267
             DL  Q ++I+   S        +  LT+ GR EWA+AR        N+ +L+ IER  
Sbjct: 323 PQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAA 382

Query: 268 CLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVC 322
             V LD        +   +L L     LHG  Y     NRW+DKS   +  ++G  G+  
Sbjct: 383 FFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NRWFDKSFTLISFKNGQLGLNA 437

Query: 323 EHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLA 378
           EH+  D  ++    E +L     H+  +            L  P RL+W    + Q  + 
Sbjct: 438 EHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIE 497

Query: 379 SSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYES 438
           SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q+ALQLA +R   +   TYE+
Sbjct: 498 SSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEA 557

Query: 439 ASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAIT 498
           +  R F+EGR + +RS T E+ AFV+A+ +  +   A  + L  K A + Q  Y  +A+T
Sbjct: 558 SMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLRDLFQKAAKKHQNMYR-LAMT 615

Query: 499 GMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQVP-TTTEMF-------- 549
           G  ID HL  L  +++ +    P  F+ E  ++S  + LSTSQ+P +   MF        
Sbjct: 616 GAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLSTSQIPQSQIRMFDPEQHPNH 671

Query: 550 ----CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
                 +GPV  +GYG  Y    E TI F ISS  S  ET++ +F   + ++L+D+ DL
Sbjct: 672 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADL 730


>gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo
           sapiens]
          Length = 792

 Score =  224 bits (571), Expect = 2e-58
 Identities = 182/615 (29%), Positives = 292/615 (47%), Gaps = 49/615 (7%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S +  LP+ PVP +Q T+  YL+ +R ++S+E F  +  + Q+F         LQ  L  
Sbjct: 166 SYQRSLPRQPVPSVQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQA--SLLQWYLRL 223

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +    +N+VS++W   +YL +R  L VNS+  ++ AR            A + +  +L Y
Sbjct: 224 KSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYMMAAR------------AGNAVHALLLY 271

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  L+   IP     G    +PLC  QY  +F++ R+PG  +D +   + S     +HV 
Sbjct: 272 RHRLNRQEIPPTLLMGM---RPLCSAQYEKIFNTTRIPGVQKDYIRHLHDS-----QHVA 323

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    +FF +        LS   L  Q ++I+   S        +  LT+  R  WA+ R
Sbjct: 324 VFHRGRFFRMGTHSRNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVR 383

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDA-PGGVELSDTHRALQLLHGGGYSKNGANRWYDK 306
           T L   +   ++L+ +E     V LDA P G+   D   +L        +  G +RW+DK
Sbjct: 384 TSLKTQAA--EALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDK 441

Query: 307 SLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAP 362
           S   +V  +G  G+  EHS  D  +     E  L      +  S+    +      LP P
Sbjct: 442 SFTLIVFSNGKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQP 501

Query: 363 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 422
           +RL+W    +I   ++ +    + + +N+D  V  F  +GK+FI++   S D+FIQ+ALQ
Sbjct: 502 QRLQWDLPDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQ 561

Query: 423 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 482
           LA +R   +   TYESA  R F EGR + +RS T EA  FVRA+ D +   P  + L L 
Sbjct: 562 LAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDP--QCLALF 619

Query: 483 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV 542
           + A+    A    A++G  +D HL AL  ++R +  + P +    T + S ++ LSTSQ+
Sbjct: 620 RVAVDKHQALLKAAMSGQGVDRHLFALYIVSRFLHLQSPFL----TQVHSEQWQLSTSQI 675

Query: 543 PT-TTEMFCC------------YGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSK 588
           P     +F              +GP   +GYG  Y    +  I F ISS  S  +T S +
Sbjct: 676 PVQQMHLFDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHR 735

Query: 589 FAKAVEESLIDMRDL 603
             + +E++L+D+  L
Sbjct: 736 LGQHIEDALLDVASL 750


>gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo
           sapiens]
          Length = 803

 Score =  223 bits (569), Expect = 3e-58
 Identities = 183/615 (29%), Positives = 293/615 (47%), Gaps = 38/615 (6%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S +  LP+ PVP +Q T+  YL+ +R ++S+E F  +  + Q+F         LQ  L  
Sbjct: 166 SYQRSLPRQPVPSVQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQA--SLLQWYLRL 223

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +    +N+VS++W   +YL +R  L VNS+  ++      P T  Q   A + +  +L Y
Sbjct: 224 KSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYMMDFLYVTP-TPLQAARAGNAVHALLLY 282

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  L+   IP     G    +PLC  QY  +F++ R+PG  +D +   + S     +HV 
Sbjct: 283 RHRLNRQEIPPTLLMGM---RPLCSAQYEKIFNTTRIPGVQKDYIRHLHDS-----QHVA 334

Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
           V    +FF +        LS   L  Q ++I+   S        +  LT+  R  WA+ R
Sbjct: 335 VFHRGRFFRMGTHSRNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVR 394

Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDA-PGGVELSDTHRALQLLHGGGYSKNGANRWYDK 306
           T L   +   ++L+ +E     V LDA P G+   D   +L        +  G +RW+DK
Sbjct: 395 TSLKTQAA--EALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDK 452

Query: 307 SLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAP 362
           S   +V  +G  G+  EHS  D  +     E  L      +  S+    +      LP P
Sbjct: 453 SFTLIVFSNGKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQP 512

Query: 363 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 422
           +RL+W    +I   ++ +    + + +N+D  V  F  +GK+FI++   S D+FIQ+ALQ
Sbjct: 513 QRLQWDLPDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQ 572

Query: 423 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 482
           LA +R   +   TYESA  R F EGR + +RS T EA  FVRA+ D +   P  + L L 
Sbjct: 573 LAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDP--QCLALF 630

Query: 483 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV 542
           + A+    A    A++G  +D HL AL  ++R +  + P +    T + S ++ LSTSQ+
Sbjct: 631 RVAVDKHQALLKAAMSGQGVDRHLFALYIVSRFLHLQSPFL----TQVHSEQWQLSTSQI 686

Query: 543 PT-TTEMFCC------------YGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSK 588
           P     +F              +GP   +GYG  Y    +  I F ISS  S  +T S +
Sbjct: 687 PVQQMHLFDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHR 746

Query: 589 FAKAVEESLIDMRDL 603
             + +E++L+D+  L
Sbjct: 747 LGQHIEDALLDVASL 761


>gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo
           sapiens]
          Length = 691

 Score =  150 bits (379), Expect = 3e-36
 Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 29/333 (8%)

Query: 289 LLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMT 344
           LLHG  Y     NRW+DKS   +  ++G  G+  EH+  D  ++    E +L     H+ 
Sbjct: 362 LLHGNCY-----NRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLG 416

Query: 345 QSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKT 404
            +            L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK 
Sbjct: 417 YTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKG 476

Query: 405 FIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVR 464
            IKK + SPDAF+Q+ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+
Sbjct: 477 LIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQ 536

Query: 465 AVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMF 524
           A+ +  +   A  + L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F
Sbjct: 537 AMME-GSHTKADLRDLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--F 592

Query: 525 MDETYLMSNRFVLSTSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-T 570
           + E  ++S  + LSTSQ+P +   MF              +GPV  +GYG  Y    E T
Sbjct: 593 LAE--VLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENT 650

Query: 571 ILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
           I F ISS  S  ET++ +F   + ++L+D+ DL
Sbjct: 651 IFFHISSKFSSSETNAQRFGNHIRKALLDIADL 683



 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)

Query: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225

Query: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
           +    +N+VS++W   +YL  R  L VNS+   +        TD Q     ++I  ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSN-YYVMDLVLIKNTDVQAARLGNIIHAMIMY 284

Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336

Query: 188 VACCNQFFVLDVVINFRRLS 207
           V    +FF L +    R LS
Sbjct: 337 VYHKGRFFKLWLYEGARLLS 356


>gi|153791514 tripartite motif-containing 32 [Homo sapiens]
          Length = 653

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 19/81 (23%)

Query: 265 RCICLVCLDAPGGVELSDTHRALQLLH---GGGYSKNGANRWYDKSLQFVVGRDG-TCGV 320
           RCI  +C+DA G + ++D+ R  ++LH   GGGYS              V+ R+G TC V
Sbjct: 576 RCIAGMCVDARGDLIVADSSRK-EILHFPKGGGYS--------------VLIREGLTCPV 620

Query: 321 VCEHSPFDGIVLVQCTEHLLK 341
               +P   ++++ C +H +K
Sbjct: 621 GIALTPKGQLLVLDCWDHCIK 641


>gi|153792582 tripartite motif-containing 32 [Homo sapiens]
          Length = 653

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 19/81 (23%)

Query: 265 RCICLVCLDAPGGVELSDTHRALQLLH---GGGYSKNGANRWYDKSLQFVVGRDG-TCGV 320
           RCI  +C+DA G + ++D+ R  ++LH   GGGYS              V+ R+G TC V
Sbjct: 576 RCIAGMCVDARGDLIVADSSRK-EILHFPKGGGYS--------------VLIREGLTCPV 620

Query: 321 VCEHSPFDGIVLVQCTEHLLK 341
               +P   ++++ C +H +K
Sbjct: 621 GIALTPKGQLLVLDCWDHCIK 641


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 537  LSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEES 596
            ++ S+   T EM  C    VP G G C + +P+  +  + S    +E SS +F  ++E+ 
Sbjct: 1282 VAPSESQPTLEMSDCD---VPAGEGQCPSLEPQEAVPVLGSTCFLEEASSDQFLPSLEDP 1338

Query: 597  LIDMRDLCSLLPPTESKPL 615
            L  M  L +     +++PL
Sbjct: 1339 LAGMNALAAAAELPQARPL 1357


>gi|170932518 paxillin isoform 3 [Homo sapiens]
          Length = 424

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 147 GQPLCMKQYYGLFS--SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFF 195
           GQP C K Y+ LFS   Y   G   D +V         PEH   A C  FF
Sbjct: 234 GQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTW-HPEHFFCAQCGAFF 283


>gi|170932516 paxillin isoform 2 [Homo sapiens]
          Length = 557

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 147 GQPLCMKQYYGLFS--SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFF 195
           GQP C K Y+ LFS   Y   G   D +V         PEH   A C  FF
Sbjct: 367 GQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTW-HPEHFFCAQCGAFF 416


>gi|170932514 paxillin isoform 1 [Homo sapiens]
          Length = 591

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 147 GQPLCMKQYYGLFS--SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFF 195
           GQP C K Y+ LFS   Y   G   D +V         PEH   A C  FF
Sbjct: 401 GQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTW-HPEHFFCAQCGAFF 450


>gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo
            sapiens]
          Length = 2971

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 539  TSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSK--FAKAVEES 596
            TS   TTT+      PV           +P TI+   S   +  + + +K   AK V   
Sbjct: 2661 TSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATK 2720

Query: 597  LIDMRDLCSLLPPTESKPLATKEKATRP 624
            +  +R   ++ P T +KP+A K  A RP
Sbjct: 2721 MATVRPPVAVKPATAAKPVAAKPAAVRP 2748


>gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo
            sapiens]
          Length = 3177

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 539  TSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSK--FAKAVEES 596
            TS   TTT+      PV           +P TI+   S   +  + + +K   AK V   
Sbjct: 2867 TSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATK 2926

Query: 597  LIDMRDLCSLLPPTESKPLATKEKATRP 624
            +  +R   ++ P T +KP+A K  A RP
Sbjct: 2927 MATVRPPVAVKPATAAKPVAAKPAAVRP 2954


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,899,163
Number of Sequences: 37866
Number of extensions: 1090546
Number of successful extensions: 2559
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2418
Number of HSP's gapped (non-prelim): 49
length of query: 630
length of database: 18,247,518
effective HSP length: 108
effective length of query: 522
effective length of database: 14,157,990
effective search space: 7390470780
effective search space used: 7390470780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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