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Search of human proteins with 188536036
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|188536036 cytochrome b reductase 1 isoform 1 [Homo sapiens]
(286 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|188536036 cytochrome b reductase 1 isoform 1 [Homo sapiens] 577 e-165
gi|241896889 cytochrome b, ascorbate dependent 3 isoform 2 [Homo... 206 2e-53
gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1 [Homo... 206 2e-53
gi|241896864 cytochrome b, ascorbate dependent 3 isoform 2 [Homo... 206 2e-53
gi|63054832 cytochrome b-561 [Homo sapiens] 175 5e-44
gi|63054830 cytochrome b-561 [Homo sapiens] 175 5e-44
gi|63054828 cytochrome b-561 [Homo sapiens] 175 5e-44
gi|188497708 cytochrome b reductase 1 isoform 2 [Homo sapiens] 138 6e-33
gi|32698982 cytochrome b-561 domain containing 1 isoform 2 [Homo... 59 5e-09
gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens] 47 2e-05
gi|197304729 cytochrome b-561 domain containing 1 isoform 3 [Hom... 44 2e-04
gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Hom... 44 2e-04
gi|42794760 acyl-CoA synthetase long-chain family member 5 isofo... 33 0.22
gi|42794758 acyl-CoA synthetase long-chain family member 5 isofo... 33 0.22
gi|42794756 acyl-CoA synthetase long-chain family member 5 isofo... 33 0.22
gi|8923206 membrane-spanning 4-domains, subfamily A, member 12 [... 33 0.29
gi|93277080 hypothetical protein LOC54916 [Homo sapiens] 31 1.1
gi|221307502 WEE1 tyrosine kinase isoform 2 [Homo sapiens] 30 1.9
gi|4507917 WEE1 tyrosine kinase isoform 1 [Homo sapiens] 30 1.9
gi|238624122 trafficking protein particle complex 9 isoform a [H... 30 3.2
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 30 3.2
gi|89276764 prostaglandin E receptor 3, subtype EP3 isoform 2 [H... 29 4.1
gi|38505180 prostaglandin E receptor 3, subtype EP3 isoform 5 [H... 29 4.1
gi|38505188 prostaglandin E receptor 3, subtype EP3 isoform 4 [H... 29 4.1
gi|38505186 prostaglandin E receptor 3, subtype EP3 isoform 8 [H... 29 4.1
gi|38505184 prostaglandin E receptor 3, subtype EP3 isoform 7 [H... 29 4.1
gi|38505182 prostaglandin E receptor 3, subtype EP3 isoform 6 [H... 29 4.1
gi|38505178 prostaglandin E receptor 3, subtype EP3 isoform 4 [H... 29 4.1
gi|38505176 prostaglandin E receptor 3, subtype EP3 isoform 3 [H... 29 4.1
gi|38505172 prostaglandin E receptor 3, subtype EP3 isoform 1 [H... 29 4.1
>gi|188536036 cytochrome b reductase 1 isoform 1 [Homo sapiens]
Length = 286
Score = 577 bits (1487), Expect = e-165
Identities = 286/286 (100%), Positives = 286/286 (100%)
Query: 1 MAMEGYWRFLALLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
MAMEGYWRFLALLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF
Sbjct: 1 MAMEGYWRFLALLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLH 120
IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLH
Sbjct: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLH 120
Query: 121 SWVGLIAVICYLLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTE 180
SWVGLIAVICYLLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTE
Sbjct: 121 SWVGLIAVICYLLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTE 180
Query: 181 KLIFSLRDPAYSTFPPEGVFVNTLGLLILVFGALIFWIVTRPQWKRPKEPNSTILHPNGG 240
KLIFSLRDPAYSTFPPEGVFVNTLGLLILVFGALIFWIVTRPQWKRPKEPNSTILHPNGG
Sbjct: 181 KLIFSLRDPAYSTFPPEGVFVNTLGLLILVFGALIFWIVTRPQWKRPKEPNSTILHPNGG 240
Query: 241 TEQGARGSMPAYSGNNMDKSDSELNSEVAARKRNLALDEAGQRSTM 286
TEQGARGSMPAYSGNNMDKSDSELNSEVAARKRNLALDEAGQRSTM
Sbjct: 241 TEQGARGSMPAYSGNNMDKSDSELNSEVAARKRNLALDEAGQRSTM 286
>gi|241896889 cytochrome b, ascorbate dependent 3 isoform 2 [Homo
sapiens]
Length = 242
Score = 206 bits (523), Expect = 2e-53
Identities = 99/219 (45%), Positives = 139/219 (63%), Gaps = 5/219 (2%)
Query: 12 LLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRL 71
LLGS +G + ++F + W+ ++R G W+GS FNWHPVLMV G V G A +VYRL
Sbjct: 12 LLGS---LGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRL 68
Query: 72 PWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICY 131
P +W KL K +HA L+ +A +L ++ +VAVF HN AN+YSLHSW+G+ V +
Sbjct: 69 PQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLF 128
Query: 132 LLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPA- 190
Q GF+VFLLPWA + LR+ L PIHV+ G I IA+ + G+ EKL FSL++
Sbjct: 129 ACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTR 188
Query: 191 -YSTFPPEGVFVNTLGLLILVFGALIFWIVTRPQWKRPK 228
Y + P E VF N+ G+L++ FG L+ +I+ WKRP+
Sbjct: 189 PYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPE 227
>gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1 [Homo
sapiens]
Length = 259
Score = 206 bits (523), Expect = 2e-53
Identities = 99/219 (45%), Positives = 139/219 (63%), Gaps = 5/219 (2%)
Query: 12 LLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRL 71
LLGS +G + ++F + W+ ++R G W+GS FNWHPVLMV G V G A +VYRL
Sbjct: 29 LLGS---LGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRL 85
Query: 72 PWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICY 131
P +W KL K +HA L+ +A +L ++ +VAVF HN AN+YSLHSW+G+ V +
Sbjct: 86 PQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLF 145
Query: 132 LLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPA- 190
Q GF+VFLLPWA + LR+ L PIHV+ G I IA+ + G+ EKL FSL++
Sbjct: 146 ACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTR 205
Query: 191 -YSTFPPEGVFVNTLGLLILVFGALIFWIVTRPQWKRPK 228
Y + P E VF N+ G+L++ FG L+ +I+ WKRP+
Sbjct: 206 PYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPE 244
>gi|241896864 cytochrome b, ascorbate dependent 3 isoform 2 [Homo
sapiens]
Length = 242
Score = 206 bits (523), Expect = 2e-53
Identities = 99/219 (45%), Positives = 139/219 (63%), Gaps = 5/219 (2%)
Query: 12 LLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRL 71
LLGS +G + ++F + W+ ++R G W+GS FNWHPVLMV G V G A +VYRL
Sbjct: 12 LLGS---LGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRL 68
Query: 72 PWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICY 131
P +W KL K +HA L+ +A +L ++ +VAVF HN AN+YSLHSW+G+ V +
Sbjct: 69 PQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLF 128
Query: 132 LLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPA- 190
Q GF+VFLLPWA + LR+ L PIHV+ G I IA+ + G+ EKL FSL++
Sbjct: 129 ACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTR 188
Query: 191 -YSTFPPEGVFVNTLGLLILVFGALIFWIVTRPQWKRPK 228
Y + P E VF N+ G+L++ FG L+ +I+ WKRP+
Sbjct: 189 PYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPE 227
>gi|63054832 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 175 bits (443), Expect = 5e-44
Identities = 92/218 (42%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Query: 18 LVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRLPWTWKC 77
L+G V W+ YR G+ W+ S L+FN HP+ MV G +F+QG A++VYR+
Sbjct: 22 LLGLTLVAMTGAWLGLYRGGIAWE-SDLQFNAHPLCMVIGLIFLQGNALLVYRV--FRNE 78
Query: 78 SKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLS 137
+K K +H L+ A ++A++ +VAVF+ H A++YSLHSW G++ + Y +Q L
Sbjct: 79 AKRTTKVLHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLV 138
Query: 138 GFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPAYSTFPPE 197
GFS FL P A SLR+ P H++ G IF + TAL+GL E L+F+L YS F PE
Sbjct: 139 GFSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFNL-GGKYSAFEPE 197
Query: 198 GVFVNTLGLLILVFGALIFWIVTRPQWKRPKEPNSTIL 235
GV N LGLL+ FG + +I+TR WKRP + L
Sbjct: 198 GVLANVLGLLLACFGGAVLYILTRADWKRPSQAEEQAL 235
>gi|63054830 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 175 bits (443), Expect = 5e-44
Identities = 92/218 (42%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Query: 18 LVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRLPWTWKC 77
L+G V W+ YR G+ W+ S L+FN HP+ MV G +F+QG A++VYR+
Sbjct: 22 LLGLTLVAMTGAWLGLYRGGIAWE-SDLQFNAHPLCMVIGLIFLQGNALLVYRV--FRNE 78
Query: 78 SKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLS 137
+K K +H L+ A ++A++ +VAVF+ H A++YSLHSW G++ + Y +Q L
Sbjct: 79 AKRTTKVLHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLV 138
Query: 138 GFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPAYSTFPPE 197
GFS FL P A SLR+ P H++ G IF + TAL+GL E L+F+L YS F PE
Sbjct: 139 GFSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFNL-GGKYSAFEPE 197
Query: 198 GVFVNTLGLLILVFGALIFWIVTRPQWKRPKEPNSTIL 235
GV N LGLL+ FG + +I+TR WKRP + L
Sbjct: 198 GVLANVLGLLLACFGGAVLYILTRADWKRPSQAEEQAL 235
>gi|63054828 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 175 bits (443), Expect = 5e-44
Identities = 92/218 (42%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Query: 18 LVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRLPWTWKC 77
L+G V W+ YR G+ W+ S L+FN HP+ MV G +F+QG A++VYR+
Sbjct: 22 LLGLTLVAMTGAWLGLYRGGIAWE-SDLQFNAHPLCMVIGLIFLQGNALLVYRV--FRNE 78
Query: 78 SKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLS 137
+K K +H L+ A ++A++ +VAVF+ H A++YSLHSW G++ + Y +Q L
Sbjct: 79 AKRTTKVLHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLV 138
Query: 138 GFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPAYSTFPPE 197
GFS FL P A SLR+ P H++ G IF + TAL+GL E L+F+L YS F PE
Sbjct: 139 GFSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFNL-GGKYSAFEPE 197
Query: 198 GVFVNTLGLLILVFGALIFWIVTRPQWKRPKEPNSTIL 235
GV N LGLL+ FG + +I+TR WKRP + L
Sbjct: 198 GVLANVLGLLLACFGGAVLYILTRADWKRPSQAEEQAL 235
>gi|188497708 cytochrome b reductase 1 isoform 2 [Homo sapiens]
Length = 157
Score = 138 bits (347), Expect = 6e-33
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 1 MAMEGYWRFLALLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
MAMEGYWRFLALLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF
Sbjct: 1 MAMEGYWRFLALLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
Query: 61 IQGIA 65
IQGIA
Sbjct: 61 IQGIA 65
>gi|32698982 cytochrome b-561 domain containing 1 isoform 2 [Homo
sapiens]
Length = 229
Score = 58.9 bits (141), Expect = 5e-09
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 20 GFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRLPWT--WKC 77
G L+ + AL + + + L G++L F+WHPV M F AI+++ + + C
Sbjct: 27 GILAHLVALGFTI-FLTALSRPGTSL-FSWHPVFMALAFCLCMAEAILLFSPEHSLFFFC 84
Query: 78 SKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLS 137
S+ +H +A + A + + + + + + ++ S HSWVG + ++ +Q L
Sbjct: 85 SRKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALC 144
Query: 138 GFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGL 178
G + A +S A L H+ G+V++ T L+G+
Sbjct: 145 GLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 185
>gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens]
Length = 222
Score = 47.0 bits (110), Expect = 2e-05
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 42 GSALEFNWHPVLMVTGFVFIQGIAIIVYRLPWTWKCSKLLMKS---IHAGLNAVAAILAI 98
GS+L F+WHPVLM F F+ A++V+ P + L K H L +A + A+
Sbjct: 41 GSSL-FSWHPVLMSLAFSFLMTEALLVFS-PESSLLHSLSRKGRARCHWVLQLLALLCAL 98
Query: 99 ISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLSGFSVF---LLPWAPLSLRAFL 155
+ + V + A++ + H GL+AV+ LQ G + LLP PL A L
Sbjct: 99 LGLGLVILHKEQLGKAHLVTRHGQAGLLAVLWAGLQCSGGVGLLYPKLLPRWPL---AKL 155
Query: 156 MPIHVYSGIVIFGTVIATALMGL 178
H SG+V + A+ L+G+
Sbjct: 156 KLYHATSGLVGYLLGSASLLLGM 178
>gi|197304729 cytochrome b-561 domain containing 1 isoform 3 [Homo
sapiens]
Length = 172
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/102 (23%), Positives = 48/102 (47%)
Query: 77 CSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLL 136
CS+ +H +A + A + + + + + + ++ S HSWVG + ++ +Q L
Sbjct: 27 CSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQAL 86
Query: 137 SGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGL 178
G + A +S A L H+ G+V++ T L+G+
Sbjct: 87 CGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 128
>gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Homo
sapiens]
Length = 251
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/102 (23%), Positives = 48/102 (47%)
Query: 77 CSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLL 136
CS+ +H +A + A + + + + + + ++ S HSWVG + ++ +Q L
Sbjct: 106 CSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQAL 165
Query: 137 SGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGL 178
G + A +S A L H+ G+V++ T L+G+
Sbjct: 166 CGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 207
>gi|42794760 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 33.5 bits (75), Expect = 0.22
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 206 LLILVFGALIF-WIVTRPQWKRPKEPNSTILHPNGGTEQGARGSMPAYSGNNMDKSDSEL 264
+ IL FGA IF W++TRPQ P P + + + G E GAR + + + S+
Sbjct: 18 ICILTFGAAIFLWLITRPQ---PVLPLLDLNNQSVGIEGGARKGVSQKNNDLTSCCFSDA 74
Query: 265 NSEVAARKRNLALDEAG 281
+ +R LA+ + G
Sbjct: 75 KTMYEVFQRGLAVSDNG 91
>gi|42794758 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 33.5 bits (75), Expect = 0.22
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 206 LLILVFGALIF-WIVTRPQWKRPKEPNSTILHPNGGTEQGARGSMPAYSGNNMDKSDSEL 264
+ IL FGA IF W++TRPQ P P + + + G E GAR + + + S+
Sbjct: 18 ICILTFGAAIFLWLITRPQ---PVLPLLDLNNQSVGIEGGARKGVSQKNNDLTSCCFSDA 74
Query: 265 NSEVAARKRNLALDEAG 281
+ +R LA+ + G
Sbjct: 75 KTMYEVFQRGLAVSDNG 91
>gi|42794756 acyl-CoA synthetase long-chain family member 5 isoform
a [Homo sapiens]
Length = 739
Score = 33.5 bits (75), Expect = 0.22
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 206 LLILVFGALIF-WIVTRPQWKRPKEPNSTILHPNGGTEQGARGSMPAYSGNNMDKSDSEL 264
+ IL FGA IF W++TRPQ P P + + + G E GAR + + + S+
Sbjct: 74 ICILTFGAAIFLWLITRPQ---PVLPLLDLNNQSVGIEGGARKGVSQKNNDLTSCCFSDA 130
Query: 265 NSEVAARKRNLALDEAG 281
+ +R LA+ + G
Sbjct: 131 KTMYEVFQRGLAVSDNG 147
>gi|8923206 membrane-spanning 4-domains, subfamily A, member 12
[Homo sapiens]
Length = 267
Score = 33.1 bits (74), Expect = 0.29
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 17 LLVGFLSVIFALVWVL---HYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIV---YR 70
++VG + + F +V L +RE LG+ +A+ + G+ F G++ I+
Sbjct: 96 IMVGLMHIGFGIVLCLISFSFREVLGFASTAV---------IGGYPFWGGLSFIISGSLS 146
Query: 71 LPWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIA 114
+ + + S+ L+K G+N V++ILA I V+ + + +N +A
Sbjct: 147 VSASKELSRCLVKG-SLGMNIVSSILAFIGVILLLVDMCINGVA 189
>gi|93277080 hypothetical protein LOC54916 [Homo sapiens]
Length = 707
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 68 VYRLPWTWKCSKLLMKSIHAGL--------NAVAAILAIISVVAVFENHNVNNIANMYSL 119
+Y L + W+ + + K + G+ NAV A+LA I + AV N + N L
Sbjct: 331 IYSLFFAWRANLDISKPLFMGVVERFWMQSNAVVAVLAGIGLAAVVS--ETNRVLNSNGL 388
Query: 120 HSWVGLIAVICYLLQLLSGFSV 141
L A + + Q+ S +SV
Sbjct: 389 QCLEWLSATLFVVYQIYSNYSV 410
>gi|221307502 WEE1 tyrosine kinase isoform 2 [Homo sapiens]
Length = 432
Score = 30.4 bits (67), Expect = 1.9
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 227 PKEPNSTILHPNGGTEQGARGSMPAYSGNNMDKSDSELNSEVAARKRNLALDEAGQRS 284
P P+S +LH +G + R G +M+ SD EL E KR + + E+ +S
Sbjct: 23 PFTPDSLLLHSSGQCRRRKRTYWNDSCGEDMEASDYELEDETRPAKR-ITITESNMKS 79
>gi|4507917 WEE1 tyrosine kinase isoform 1 [Homo sapiens]
Length = 646
Score = 30.4 bits (67), Expect = 1.9
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 227 PKEPNSTILHPNGGTEQGARGSMPAYSGNNMDKSDSELNSEVAARKRNLALDEAGQRS 284
P P+S +LH +G + R G +M+ SD EL E KR + + E+ +S
Sbjct: 237 PFTPDSLLLHSSGQCRRRKRTYWNDSCGEDMEASDYELEDETRPAKR-ITITESNMKS 293
>gi|238624122 trafficking protein particle complex 9 isoform a [Homo
sapiens]
Length = 1246
Score = 29.6 bits (65), Expect = 3.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 224 WKRPKEPNSTILHPNGGTEQGARG 247
W+R + +T+ HP GG ++G+ G
Sbjct: 33 WRRSQAARATVTHPRGGHDRGSHG 56
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 29.6 bits (65), Expect = 3.2
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 131 YLLQLLSGFSVFLLPWAPLSLRA-FLMPIHVYSGIVIFGTVIATALMGLT 179
+L + GFS + P P +L++ +L P++ G+ + ++ ALMGL+
Sbjct: 3307 FLPYFVPGFSPYYAPQIPGALQSGYLQPMYGMEGLFPYSPALSQALMGLS 3356
>gi|89276764 prostaglandin E receptor 3, subtype EP3 isoform 2 [Homo
sapiens]
Length = 402
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
>gi|38505180 prostaglandin E receptor 3, subtype EP3 isoform 5 [Homo
sapiens]
Length = 388
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
>gi|38505188 prostaglandin E receptor 3, subtype EP3 isoform 4 [Homo
sapiens]
Length = 390
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
>gi|38505186 prostaglandin E receptor 3, subtype EP3 isoform 8 [Homo
sapiens]
Length = 418
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
>gi|38505184 prostaglandin E receptor 3, subtype EP3 isoform 7 [Homo
sapiens]
Length = 365
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
>gi|38505182 prostaglandin E receptor 3, subtype EP3 isoform 6 [Homo
sapiens]
Length = 374
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
>gi|38505178 prostaglandin E receptor 3, subtype EP3 isoform 4 [Homo
sapiens]
Length = 390
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
>gi|38505176 prostaglandin E receptor 3, subtype EP3 isoform 3 [Homo
sapiens]
Length = 393
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
>gi|38505172 prostaglandin E receptor 3, subtype EP3 isoform 1 [Homo
sapiens]
Length = 425
Score = 29.3 bits (64), Expect = 4.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 5 GYWRFLALLGSALL----VGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVF 60
G W LA+L ALL VG +V + W G G +G++ NW + + F F
Sbjct: 180 GVW--LAVLAFALLPVLGVGQYTVQWPGTWCF-ISTGRGGNGTSSSHNWGNLFFASAFAF 236
Query: 61 IQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVA 93
+ +A+ V T+ C+ +K++ + A A
Sbjct: 237 LGLLALTV-----TFSCNLATIKALVSRCRAKA 264
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.140 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,870,360
Number of Sequences: 37866
Number of extensions: 407421
Number of successful extensions: 1407
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1369
Number of HSP's gapped (non-prelim): 44
length of query: 286
length of database: 18,247,518
effective HSP length: 101
effective length of query: 185
effective length of database: 14,423,052
effective search space: 2668264620
effective search space used: 2668264620
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.