Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 188219563
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|188219563 hypothetical protein LOC126731 [Homo sapiens]
(270 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|188219563 hypothetical protein LOC126731 [Homo sapiens] 559 e-160
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 46 3e-05
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 46 3e-05
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 45 7e-05
gi|23503317 coiled-coil domain containing 96 [Homo sapiens] 45 9e-05
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 44 1e-04
gi|83921602 solute carrier family 38, member 10 isoform a [Homo ... 44 1e-04
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 43 3e-04
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 43 3e-04
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 43 3e-04
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 43 3e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 43 3e-04
gi|190684675 X-ray repair cross complementing protein 1 [Homo sa... 42 4e-04
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 42 4e-04
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 42 6e-04
gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo sa... 42 7e-04
gi|150378549 tangerin [Homo sapiens] 41 0.001
gi|30795231 brain abundant, membrane attached signal protein 1 [... 40 0.002
gi|153070260 myristoylated alanine-rich protein kinase C substra... 40 0.002
gi|157649073 adenylyl cyclase-associated protein [Homo sapiens] 40 0.002
gi|5453595 adenylyl cyclase-associated protein [Homo sapiens] 40 0.002
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 40 0.002
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 40 0.002
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 40 0.003
gi|147902746 MEX3A protein [Homo sapiens] 40 0.003
gi|199559779 coiled-coil domain containing 8 [Homo sapiens] 39 0.004
gi|130502140 NEZHA isoform 2 [Homo sapiens] 39 0.005
gi|122937255 NEZHA isoform 1 [Homo sapiens] 39 0.005
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 39 0.005
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 39 0.005
>gi|188219563 hypothetical protein LOC126731 [Homo sapiens]
Length = 270
Score = 559 bits (1441), Expect = e-160
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MSPGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSED 60
MSPGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSED
Sbjct: 1 MSPGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSED 60
Query: 61 SASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAA 120
SASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAA
Sbjct: 61 SASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAA 120
Query: 121 LPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKEN 180
LPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKEN
Sbjct: 121 LPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKEN 180
Query: 181 KHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHS 240
KHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHS
Sbjct: 181 KHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHS 240
Query: 241 VDVEKNRKMKASSSENPWMTEYMRCYSARA 270
VDVEKNRKMKASSSENPWMTEYMRCYSARA
Sbjct: 241 VDVEKNRKMKASSSENPWMTEYMRCYSARA 270
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 46.2 bits (108), Expect = 3e-05
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 58 SEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAE 117
+E + +SE++GA P P PS PPPV P ++E E A EE + + A E A
Sbjct: 777 TEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAV 836
Query: 118 DAALPALPVKD--VEDKPEQQTRTRETDKSPTSTE 150
D PVK E+ E + ++ + + + E
Sbjct: 837 DTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAE 871
Score = 34.7 bits (78), Expect = 0.090
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 28/189 (14%)
Query: 58 SEDSASSESSGAGGPAPRC---------APPSPPPPVEPA-TQEEAERRARGAPEEQDAE 107
S + +++ +G GP P PP+PPP PA T+ A GAP A
Sbjct: 736 SPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAP 795
Query: 108 AGDA--------EAEDAEDAALPALPVKDVEDKPEQQTRTRETDKS--PTSTEPRQQPSA 157
+ E ++ E AA P + + + P + +T K+ P +E ++
Sbjct: 796 PSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEE 855
Query: 158 LFARG-NRKAVKSPQRSSSKIKENKHPFALYGWGEKQT--DTGSQKTHNVCASAPVHEIH 214
A+G + +A ++ + K ++ + G G T +G+ + + A+ E+
Sbjct: 856 GPAKGKDAEAAEATAEGALKAEKKEG-----GSGRATTAKSSGAPQDSDSSATCSADEVD 910
Query: 215 ESALRAKNR 223
E+ KNR
Sbjct: 911 EAEGGDKNR 919
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Query: 44 HAPWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPS---PPPPVEPATQEEAERR 96
HAP W P +S S G GG + R A S P+ P TQ+ ++R
Sbjct: 1814 HAPI----WRPGTEQSSGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQR 1865
Score = 28.9 bits (63), Expect = 4.9
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 90 QEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTST 149
Q++ + R + EE+D + + EAE E+ +VE+ E + + D TS
Sbjct: 506 QQQQQPMPRSSQEEKDEKEKEKEAEKEEEK-------PEVENDKEDLLKEKTDD---TSG 555
Query: 150 EPRQQPSALFARGNRKAVKSPQRSSSKI 177
E + A+ ++G RK S R +I
Sbjct: 556 EDNDEKEAVASKG-RKTANSQGRRKGRI 582
Score = 28.5 bits (62), Expect = 6.5
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 59 EDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAE 107
ED+A ++ + P P+ P P +P + + R+ P +++AE
Sbjct: 970 EDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAE 1018
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 46.2 bits (108), Expect = 3e-05
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 58 SEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAE 117
+E + +SE++GA P P PS PPPV P ++E E A EE + + A E A
Sbjct: 794 TEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAV 853
Query: 118 DAALPALPVKD--VEDKPEQQTRTRETDKSPTSTE 150
D PVK E+ E + ++ + + + E
Sbjct: 854 DTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAE 888
Score = 34.7 bits (78), Expect = 0.090
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 28/189 (14%)
Query: 58 SEDSASSESSGAGGPAPRC---------APPSPPPPVEPA-TQEEAERRARGAPEEQDAE 107
S + +++ +G GP P PP+PPP PA T+ A GAP A
Sbjct: 753 SPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAP 812
Query: 108 AGDA--------EAEDAEDAALPALPVKDVEDKPEQQTRTRETDKS--PTSTEPRQQPSA 157
+ E ++ E AA P + + + P + +T K+ P +E ++
Sbjct: 813 PSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEE 872
Query: 158 LFARG-NRKAVKSPQRSSSKIKENKHPFALYGWGEKQT--DTGSQKTHNVCASAPVHEIH 214
A+G + +A ++ + K ++ + G G T +G+ + + A+ E+
Sbjct: 873 GPAKGKDAEAAEATAEGALKAEKKEG-----GSGRATTAKSSGAPQDSDSSATCSADEVD 927
Query: 215 ESALRAKNR 223
E+ KNR
Sbjct: 928 EAEGGDKNR 936
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Query: 44 HAPWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPS---PPPPVEPATQEEAERR 96
HAP W P +S S G GG + R A S P+ P TQ+ ++R
Sbjct: 1830 HAPI----WRPGTEQSSGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQR 1881
Score = 28.9 bits (63), Expect = 4.9
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 90 QEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTST 149
Q++ + R + EE+D + + EAE E+ +VE+ E + + D TS
Sbjct: 506 QQQQQPMPRSSQEEKDEKEKEKEAEKEEEK-------PEVENDKEDLLKEKTDD---TSG 555
Query: 150 EPRQQPSALFARGNRKAVKSPQRSSSKI 177
E + A+ ++G RK S R +I
Sbjct: 556 EDNDEKEAVASKG-RKTANSQGRRKGRI 582
Score = 28.5 bits (62), Expect = 6.5
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 59 EDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAE 107
ED+A ++ + P P+ P P +P + + R+ P +++AE
Sbjct: 986 EDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAE 1034
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 45.1 bits (105), Expect = 7e-05
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 56 GSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAED 115
G E++ S + A P P +EEA+ A E++ AE +
Sbjct: 496 GGEEETKSPPAEEAASPEKEAKSP---------VKEEAKSPAEAKSPEKEEAKSPAEVKS 546
Query: 116 AEDAALPALPVKDVEDKPEQQTRTRETDKSPT---STEPRQQPSALFARGNRKAVKSPQR 172
E A PA ++ + PE ++ +E KSP S E + P+ A+ +A KSP++
Sbjct: 547 PEKAKSPA--KEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA-KSPEK 603
Query: 173 SSSKIKEN-KHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKL 231
+ S +KE K P +++ + ++ A +P E +S +AK+ EK +
Sbjct: 604 AKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKS---PEKEEA 660
Query: 232 VAQRQRAHSVDVEKNRKMKASS 253
+ + V E KA S
Sbjct: 661 KSPEKAKSPVKAEAKSPEKAKS 682
Score = 39.7 bits (91), Expect = 0.003
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 55 AGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAE----RRARGAPEEQDAEAGD 110
A S ++ S E A PA +P P + + AE +A+ +E+ +
Sbjct: 558 AKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAE 617
Query: 111 AEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSP---TSTEPRQQPSALFARGNRKA- 166
A++ E+A PA +V+ + ++ T+E KSP S E + S A+ KA
Sbjct: 618 AKSPVKEEAKSPA----EVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAE 673
Query: 167 VKSPQRSSSKIK-ENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKN--- 222
KSP+++ S +K E K P + ++ + A +PV E +S +AK+
Sbjct: 674 AKSPEKAKSPVKAEAKSP------EKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVK 727
Query: 223 --RRQVEKRKLVAQR-----QRAHSVDVEKNRKMKASSSENP 257
+ EK K + ++A S + K +K+ ++ P
Sbjct: 728 EEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTP 769
Score = 37.7 bits (86), Expect = 0.011
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 19/187 (10%)
Query: 86 EPATQEEAERRARGAPEEQDAEAGDAEAED-------AEDAALP----ALPVKDVEDKP- 133
E +EE E + EE+ E +AE + AE+AA P PVK+ P
Sbjct: 469 EVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPA 528
Query: 134 EQQTRTRETDKSPT---STEPRQQPSALFARGNRKAVKSPQRSSSKI-KENKHPFALYGW 189
E ++ +E KSP S E + P+ A+ +A KSP++ +K E K P
Sbjct: 529 EAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEA-KSPEKEEAKSPAEVKSPEKAKSP 587
Query: 190 GEKQTDTGSQKTHNVCASAPVHEIHESALRAKN--RRQVEKRKLVAQRQRAHSVDVEKNR 247
+++ + ++ A +PV E +S AK+ + + + V ++A S E+ +
Sbjct: 588 AKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAK 647
Query: 248 KMKASSS 254
+ + S
Sbjct: 648 SPEKAKS 654
Score = 35.8 bits (81), Expect = 0.040
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 11/169 (6%)
Query: 89 TQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPA-LPVKDVEDKPEQQTRT--RETDKS 145
T+E E + A EE+ E E E+AE P + PE++ ++ +E KS
Sbjct: 467 TEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKS 526
Query: 146 PTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKEN-KHPFALYGWGEKQTDTGSQKTHNV 204
P + ++ A + VKSP+++ S KE K P +++ + ++
Sbjct: 527 PAEAKSPEKEEA----KSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPE 582
Query: 205 CASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASS 253
A +P E +S AK+ EK K + + + + K +A S
Sbjct: 583 KAKSPAKEEAKSPAEAKS---PEKAKSPVKEEAKSPAEAKSPVKEEAKS 628
Score = 35.4 bits (80), Expect = 0.053
Identities = 39/175 (22%), Positives = 62/175 (35%), Gaps = 23/175 (13%)
Query: 87 PATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSP 146
P + A+ AR ++ +A E+ + P+K+ PE++ +E KSP
Sbjct: 764 PEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSP 823
Query: 147 TSTEPRQQPSALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCA 206
E + Q VK P + K +E K P T +K +
Sbjct: 824 VKEEEKPQ---------EVKVKEPPK---KAEEEKAP---------ATPKTEEKKDSKKE 862
Query: 207 SAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSSENPWMTE 261
AP E + + K VEK K + A + E +K+ E P E
Sbjct: 863 EAPKKEAPKPKVEEKKEPAVEKPK--ESKVEAKKEEAEDKKKVPTPEKEAPAKVE 915
Score = 34.3 bits (77), Expect = 0.12
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 18/139 (12%)
Query: 55 AGSSEDSASSESSGAGGPAPRCAPP---SP-------PPPVEPATQEEAERRARGAPEEQ 104
A S ++ S E A PA +P SP PP + +EEA+ A E+
Sbjct: 524 AKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEK 583
Query: 105 DAEAGDAEAEDAEDAALPAL---PVKDVEDKP-EQQTRTRETDKSPTSTEPRQQPSALFA 160
EA+ +A P PVK+ P E ++ +E KSP + ++ +
Sbjct: 584 AKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS--- 640
Query: 161 RGNRKAVKSPQRSSSKIKE 179
++ KSP+++ S KE
Sbjct: 641 -PTKEEAKSPEKAKSPEKE 658
Score = 33.5 bits (75), Expect = 0.20
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 14/165 (8%)
Query: 82 PPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRE 141
P + +E+A+ + P++++ ++ E E ++ + P K E+K +T E
Sbjct: 796 PEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEE 855
Query: 142 TDKSPTSTEPRQQ-PSALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQK 200
S P+++ P AV+ P+ S + K+ E+ D
Sbjct: 856 KKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKK-----------EEAEDKKKVP 904
Query: 201 THNVCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHSVDVEK 245
T A A V E+ E A + K + +V K++ + + S EK
Sbjct: 905 TPEKEAPAKV-EVKEDA-KPKEKTEVAKKEPDDAKAKEPSKPAEK 947
Score = 32.7 bits (73), Expect = 0.34
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 72 PAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVED 131
P P P+ E A +E A+ P++ A+ AE E A ++
Sbjct: 904 PTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAK 963
Query: 132 KPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKENKHP 183
KPE++ +T K T + +PS KA K+ + SS+ K++K P
Sbjct: 964 KPEEKPKTEAKAKEDDKTLSK-EPS------KPKAEKAEKSSSTDQKDSKPP 1008
>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
Length = 555
Score = 44.7 bits (104), Expect = 9e-05
Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 14/180 (7%)
Query: 54 PAGSSEDSASSESSGAGGPAPRCAP-PSPPPPVEPATQEEAERRARGAPEEQDAEAGDAE 112
P G + A+ E G G P P P P P E +E A+ PEE +AEAG E
Sbjct: 70 PKGLTAAEAAGEE-GPGEPGRPAEPQPEPEEPAEVGAEEPAQPEPGAGPEELEAEAGAEE 128
Query: 113 AEDAED-------AALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRK 165
E A + A+LP + + E + T + E Q+ A + +
Sbjct: 129 LEQAAEGKEVRFQASLPLTRIDEEEAAAAPEAETERVEGEEEDKEETQRDGAESKERDGE 188
Query: 166 AVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQ 225
+ + K + F W E+ QK + + + + S L +NR Q
Sbjct: 189 GRPAKSQEEGKRLYGRDEFEDLEWSEE-----VQKLQEQQLRSDLLDQYRSLLVERNRSQ 243
Score = 39.3 bits (90), Expect = 0.004
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 4/122 (3%)
Query: 50 DDWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARG---APEEQDA 106
D G G E A+ S P +P EP +EE + ++G A E+ +A
Sbjct: 10 DPGGEGGDGESLAARPSKIKASSGPPTSPEPGELESEPEEEEEEQAASQGGTAADEQAEA 69
Query: 107 EAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKA 166
G AE A + P P + E +PE + + P EP P L A +
Sbjct: 70 PKGLTAAEAAGEEG-PGEPGRPAEPQPEPEEPAEVGAEEPAQPEPGAGPEELEAEAGAEE 128
Query: 167 VK 168
++
Sbjct: 129 LE 130
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 44.3 bits (103), Expect = 1e-04
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 34/187 (18%)
Query: 74 PRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKP 133
PR P PPPPV+P AE+R EQ+ + AE ++ E +
Sbjct: 1114 PRPLHPPPPPPVQPPQHPRAEQR------EQERAVREQWAE------------REREMER 1155
Query: 134 EQQTRT-RETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEK 192
++TR+ RE D+ PR + + R +A ++S K K + P A K
Sbjct: 1156 RERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPA------K 1209
Query: 193 QTDTGSQKTH--------NVCASAPVHEIHESALRAKNRRQVEK-RKLVAQRQRAHSVDV 243
D +KT + S V + E A RAK R + K ++ Q++R +
Sbjct: 1210 LLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAER 1269
Query: 244 EKNRKMK 250
E+NR+++
Sbjct: 1270 ERNRQLE 1276
Score = 29.3 bits (64), Expect = 3.8
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 81 PPPPVEPATQE-------EAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDV---E 130
PP +P T E E+ER E+++ +E D P +P+ D +
Sbjct: 740 PPAATQPQTSETQTSHLPESERIHHTVEEKEEVTMDTSENRPENDVPEPPMPIADQVSND 799
Query: 131 DKPEQQTRTRETDKS 145
D+PE E +S
Sbjct: 800 DRPEGSVEDEEKKES 814
>gi|83921602 solute carrier family 38, member 10 isoform a [Homo
sapiens]
Length = 1119
Score = 43.9 bits (102), Expect = 1e-04
Identities = 40/150 (26%), Positives = 52/150 (34%), Gaps = 22/150 (14%)
Query: 55 AGSSEDSASSESSGAGGPAPRCAP-PSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEA 113
AG + A G P P P P P P EP Q + ER Q EAG AE
Sbjct: 636 AGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEEAGRAEM 695
Query: 114 EDAE-----------------DAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPS 156
D D L V + + K Q R + + P E Q+P
Sbjct: 696 LDHAVLLQVIKEQQVQQKRLLDQQEKLLAVIEEQHKEIHQQRQEDEEDKPRQVEVHQEPG 755
Query: 157 ALFARGNRKAVKSPQRSSSKIKENKHPFAL 186
A RG ++P+ + + EN P L
Sbjct: 756 AAVPRGQ----EAPEGKARETVENLPPLPL 781
Score = 28.5 bits (62), Expect = 6.5
Identities = 31/115 (26%), Positives = 41/115 (35%), Gaps = 18/115 (15%)
Query: 66 SSGAGGPAP----RCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAAL 121
S AGG AP + APP P E E+ E R + EAGD ED +
Sbjct: 524 SRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDL-PEDPQ---- 578
Query: 122 PALPVKDVEDKPEQQTRTRETDKSPTSTEPR------QQPSALFARGNRKAVKSP 170
V + + +P Q + PR +Q + L G KA P
Sbjct: 579 ---KVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGP 630
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 43.1 bits (100), Expect = 3e-04
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 56 GSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAER----RARGAPEEQDAEAGDA 111
G ED+ASSE A PA P EP +EE E+ + EE+ E +
Sbjct: 1239 GEEEDAASSEVPAAS-PADSSNSPETETK-EPEVEEEEEKPRVSEEQRQSEEEQQELEEP 1296
Query: 112 EAEDAEDAALPALP-----VKDVEDKPEQQTRTRETDKSPTSTEPRQQPSA--LFARGNR 164
E E+ EDAA D +D + T+ +E ++ PT + +++P F N
Sbjct: 1297 EPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANM 1356
Query: 165 KAVKSPQRSSSKIKENK 181
Q+S KIK+ +
Sbjct: 1357 ------QKSREKIKDKE 1367
Score = 35.0 bits (79), Expect = 0.069
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 79 PSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTR 138
P P+ +EE E +A E ++AE G E EDA + +PA D + PE +T+
Sbjct: 1213 PKEDMPLPEERKEEEEMQA----EAEEAEEG--EEEDAASSEVPAASPADSSNSPETETK 1266
Query: 139 ----TRETDKSPTSTEPRQ 153
E +K S E RQ
Sbjct: 1267 EPEVEEEEEKPRVSEEQRQ 1285
Score = 28.5 bits (62), Expect = 6.5
Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 13/164 (7%)
Query: 102 EEQDAEAGDAEAEDAEDAALPALPVKDV-EDKPEQQTRTRETDKSPTSTEP---RQQPSA 157
EE++AE G+ E ++ L K V + EQ + + E++K P P +
Sbjct: 790 EEEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESEKKPEVMAPVSSTRLSKQ 849
Query: 158 LFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESA 217
+ + A P R ++N+ +G D S+ +SAP + E
Sbjct: 850 VLPHDSLPANSQPSRRGRWGRKNRKTQERFG------DKDSKLLLEETSSAPQEQYGECG 903
Query: 218 LRAKNRRQ---VEKRKLVAQRQRAHSVDVEKNRKMKASSSENPW 258
+++ ++ + +LVA ++ K + S PW
Sbjct: 904 EKSEATQEQYTESEEQLVASEEQPSQDGKPDLPKRRLSEGVEPW 947
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 43.1 bits (100), Expect = 3e-04
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 56 GSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAER----RARGAPEEQDAEAGDA 111
G ED+ASSE A PA P EP +EE E+ + EE+ E +
Sbjct: 1239 GEEEDAASSEVPAAS-PADSSNSPETETK-EPEVEEEEEKPRVSEEQRQSEEEQQELEEP 1296
Query: 112 EAEDAEDAALPALP-----VKDVEDKPEQQTRTRETDKSPTSTEPRQQPSA--LFARGNR 164
E E+ EDAA D +D + T+ +E ++ PT + +++P F N
Sbjct: 1297 EPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANM 1356
Query: 165 KAVKSPQRSSSKIKENK 181
Q+S KIK+ +
Sbjct: 1357 ------QKSREKIKDKE 1367
Score = 35.0 bits (79), Expect = 0.069
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 79 PSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTR 138
P P+ +EE E +A E ++AE G E EDA + +PA D + PE +T+
Sbjct: 1213 PKEDMPLPEERKEEEEMQA----EAEEAEEG--EEEDAASSEVPAASPADSSNSPETETK 1266
Query: 139 ----TRETDKSPTSTEPRQ 153
E +K S E RQ
Sbjct: 1267 EPEVEEEEEKPRVSEEQRQ 1285
Score = 28.5 bits (62), Expect = 6.5
Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 13/164 (7%)
Query: 102 EEQDAEAGDAEAEDAEDAALPALPVKDV-EDKPEQQTRTRETDKSPTSTEP---RQQPSA 157
EE++AE G+ E ++ L K V + EQ + + E++K P P +
Sbjct: 790 EEEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESEKKPEVMAPVSSTRLSKQ 849
Query: 158 LFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESA 217
+ + A P R ++N+ +G D S+ +SAP + E
Sbjct: 850 VLPHDSLPANSQPSRRGRWGRKNRKTQERFG------DKDSKLLLEETSSAPQEQYGECG 903
Query: 218 LRAKNRRQ---VEKRKLVAQRQRAHSVDVEKNRKMKASSSENPW 258
+++ ++ + +LVA ++ K + S PW
Sbjct: 904 EKSEATQEQYTESEEQLVASEEQPSQDGKPDLPKRRLSEGVEPW 947
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 43.1 bits (100), Expect = 3e-04
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 56 GSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAER----RARGAPEEQDAEAGDA 111
G ED+ASSE A PA P EP +EE E+ + EE+ E +
Sbjct: 1239 GEEEDAASSEVPAAS-PADSSNSPETETK-EPEVEEEEEKPRVSEEQRQSEEEQQELEEP 1296
Query: 112 EAEDAEDAALPALP-----VKDVEDKPEQQTRTRETDKSPTSTEPRQQPSA--LFARGNR 164
E E+ EDAA D +D + T+ +E ++ PT + +++P F N
Sbjct: 1297 EPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANM 1356
Query: 165 KAVKSPQRSSSKIKENK 181
Q+S KIK+ +
Sbjct: 1357 ------QKSREKIKDKE 1367
Score = 35.0 bits (79), Expect = 0.069
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 79 PSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTR 138
P P+ +EE E +A E ++AE G E EDA + +PA D + PE +T+
Sbjct: 1213 PKEDMPLPEERKEEEEMQA----EAEEAEEG--EEEDAASSEVPAASPADSSNSPETETK 1266
Query: 139 ----TRETDKSPTSTEPRQ 153
E +K S E RQ
Sbjct: 1267 EPEVEEEEEKPRVSEEQRQ 1285
Score = 28.5 bits (62), Expect = 6.5
Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 13/164 (7%)
Query: 102 EEQDAEAGDAEAEDAEDAALPALPVKDV-EDKPEQQTRTRETDKSPTSTEP---RQQPSA 157
EE++AE G+ E ++ L K V + EQ + + E++K P P +
Sbjct: 790 EEEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESEKKPEVMAPVSSTRLSKQ 849
Query: 158 LFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESA 217
+ + A P R ++N+ +G D S+ +SAP + E
Sbjct: 850 VLPHDSLPANSQPSRRGRWGRKNRKTQERFG------DKDSKLLLEETSSAPQEQYGECG 903
Query: 218 LRAKNRRQ---VEKRKLVAQRQRAHSVDVEKNRKMKASSSENPW 258
+++ ++ + +LVA ++ K + S PW
Sbjct: 904 EKSEATQEQYTESEEQLVASEEQPSQDGKPDLPKRRLSEGVEPW 947
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 42.7 bits (99), Expect = 3e-04
Identities = 40/207 (19%), Positives = 85/207 (41%), Gaps = 23/207 (11%)
Query: 55 AGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAE 114
+ SEDS+ E G PA + A P+ + P + A + + + E+ ++ D E +
Sbjct: 84 SSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPG--KAAAKASESSSSEESSDDDDEEDQ 141
Query: 115 DAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTE--PRQQP---SALFARGNRKAVKS 169
+ P P ++ ++ ++D +S + P+ Q + + + KA
Sbjct: 142 KKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPK 201
Query: 170 PQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKR 229
P R++ KI K + + + +S+ + E A ++ V K+
Sbjct: 202 PARAAPKIANGK---------------AASSSSSSSSSSSSDDSEEEKAAATPKKTVPKK 246
Query: 230 KLVAQRQ-RAHSVDVEKNRKMKASSSE 255
++VA+ +A + K+ + SSS+
Sbjct: 247 QVVAKAPVKAATTPTRKSSSSEDSSSD 273
Score = 39.7 bits (91), Expect = 0.003
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 25/218 (11%)
Query: 55 AGSSEDSASSESS-------GAGGPAPRCAPPSPPPPVEP-ATQEEAERRARGAPEEQDA 106
+ SSEDS+S E GP PPS PPP + TQ + + P E
Sbjct: 264 SSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSE 323
Query: 107 EAGDAEAEDAEDAALPALPVKDVEDK------PEQQTRTRETDKSPT-STEPRQQPSALF 159
++ D +E+ P P K V K P ++ +D S + S+E + PS
Sbjct: 324 DSSDESDSSSEEEKKP--PTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPS--- 378
Query: 160 ARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCA-SAPVHEIHESAL 218
+ A + S+ K P KQ G QK A S+ E S+
Sbjct: 379 ----KPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSE 434
Query: 219 RAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSSEN 256
K ++ V K A + A S+ ++ + SS +
Sbjct: 435 EEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSD 472
Score = 34.3 bits (77), Expect = 0.12
Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 18/214 (8%)
Query: 54 PAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEA 113
P SSEDS+ S + PP+ + T+ ++A E +++ D+++
Sbjct: 318 PVESSEDSSDESDSSS---EEEKKPPTKAVVSKATTKPPPAKKAA----ESSSDSSDSDS 370
Query: 114 -EDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQR 172
ED E + PA K+ +KP T++ + +P L R + +
Sbjct: 371 SEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEES 430
Query: 173 SSSKIKENKHPF----------ALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKN 222
SSS+ ++ K A KQ GS+ + + S+ E E ++
Sbjct: 431 SSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAV 490
Query: 223 RRQVEKRKLVAQRQRAHSVDVEKNRKMKASSSEN 256
+++ +K A + S K +SSS++
Sbjct: 491 KKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDD 524
Score = 31.2 bits (69), Expect = 1.00
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 24/138 (17%)
Query: 54 PAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEA 113
P ++ S S S + P+ P P A + + AR AP+ + +A + +
Sbjct: 160 PPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSS 219
Query: 114 --------EDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRK 165
+D+E+ A P K V P++Q + K+ T+ RK
Sbjct: 220 SSSSSSSSDDSEEEKAAATPKKTV---PKKQVVAKAPVKAATTP-------------TRK 263
Query: 166 AVKSPQRSSSKIKENKHP 183
+ S SS + +E K P
Sbjct: 264 SSSSEDSSSDEEEEQKKP 281
Score = 31.2 bits (69), Expect = 1.00
Identities = 49/232 (21%), Positives = 87/232 (37%), Gaps = 54/232 (23%)
Query: 54 PAGSSEDSASSESSG--------------------AGGPAPRC--------APPSPPPPV 85
P GS + S+ S+SS AGG AP A S
Sbjct: 463 PQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSS 522
Query: 86 EPATQEEAER-RARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDK 144
+ +++EE E+ + +G+P Q +A A A++ K+ E++ E++ +
Sbjct: 523 DDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGK----AAKNSEEEEEEKKKAAVVVS 578
Query: 145 SPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNV 204
S + R+Q A K ++PQ K+ + + F GEK+
Sbjct: 579 KSGSLKKRKQNEA------AKEAETPQAKKIKL-QTPNTFPKRKKGEKR----------- 620
Query: 205 CASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSSEN 256
AS+P + E + +R V A+R A N+ +K + ++
Sbjct: 621 -ASSPFRRVREEEIEVDSR--VADNSFDAKRGAAGDWGERANQVLKFTKGKS 669
Score = 30.8 bits (68), Expect = 1.3
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 87 PATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPA----LPVKDVEDKPEQQTRTRET 142
P ++ ++ + E+ E + + A+ AA+PA LP K + + + E+
Sbjct: 73 PVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEES 132
Query: 143 DKSPTSTEPRQQPSALFARGNRKAVKSPQRSS 174
+ ++QP + KA K+P + +
Sbjct: 133 SDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKA 164
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 42.7 bits (99), Expect = 3e-04
Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 25/132 (18%)
Query: 55 AGSSEDSASSESSGAGGPAPRCAPPSP---PPPVEPATQEEAERRARGAPEEQDAEAGDA 111
+ SS S+SS SS + +P A P P P P P ERR+R
Sbjct: 2630 SSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRS------------ 2677
Query: 112 EAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQ 171
P P+ + D E + PR Q S+ RG+R+ +
Sbjct: 2678 ----------PRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDS 2727
Query: 172 RSSSKIKENKHP 183
RS S + + P
Sbjct: 2728 RSPSHKRRRETP 2739
Score = 33.9 bits (76), Expect = 0.15
Identities = 39/200 (19%), Positives = 69/200 (34%), Gaps = 22/200 (11%)
Query: 54 PAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEA 113
P S S SS GP+P + + P P A R +R +PE +
Sbjct: 1629 PRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRR 1688
Query: 114 EDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRS 173
+ + P L K + + + +S T R+ PS K+ S +R
Sbjct: 1689 RSSRSS--PELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRR 1746
Query: 174 SSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKLVA 233
S+ +T T S++ + R+++R + EK +
Sbjct: 1747 SA--------------SSPRTKTTSRRGRSPSPKP------RGLQRSRSRSRREKTRTTR 1786
Query: 234 QRQRAHSVDVEKNRKMKASS 253
+R R+ S R+ ++ S
Sbjct: 1787 RRDRSGSSQSTSRRRQRSRS 1806
Score = 31.2 bits (69), Expect = 1.00
Identities = 45/228 (19%), Positives = 82/228 (35%), Gaps = 12/228 (5%)
Query: 53 GPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEA---ERRARGAPE------E 103
G S E S+S+ESS P R A EP T+ R +R +PE
Sbjct: 1644 GRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARL 1703
Query: 104 QDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGN 163
+ + + P PE ++R + + +++ PR + ++ R
Sbjct: 1704 SRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSP 1763
Query: 164 RKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHE--SALRAK 221
+ QRS S+ + K + + S++ + + V S ++
Sbjct: 1764 SPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSR 1823
Query: 222 NRRQVEKRKLVAQRQRAHSVDVEKNRKMKAS-SSENPWMTEYMRCYSA 268
+ + E + ++R+R S +RK S +S PW R A
Sbjct: 1824 SPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPA 1871
Score = 30.0 bits (66), Expect = 2.2
Identities = 47/216 (21%), Positives = 80/216 (37%), Gaps = 37/216 (17%)
Query: 57 SSEDSASSESSGAGGPAPRCAPPS---PPPPVEPATQEEA-------------ERRARGA 100
+SE + S S P+ PP+ P PV A +++ + + GA
Sbjct: 2420 TSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGA 2479
Query: 101 PEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFA 160
+ AGD + A P +P DV + P ++ QQPSAL A
Sbjct: 2480 VATTTSSAGDHNGMLSVPA--PGVPHSDVGEPP--------------ASTGAQQPSALAA 2523
Query: 161 RGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRA 220
K +S SSS + + + +GS + + +S PV E AL+
Sbjct: 2524 LQPAKERRSSSSSSSSSSSSSSSSSS---SSSSSSSGSSSSDSEGSSLPVQP--EVALKR 2578
Query: 221 KNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSSEN 256
++ V + + ++ R+ +SSS +
Sbjct: 2579 VPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSS 2614
Score = 28.1 bits (61), Expect = 8.4
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 160 ARGNRKAVKSPQRSSSKIKEN---KHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHES 216
AR ++ P + S ++E+ + P +K+ D G + +S+P E +S
Sbjct: 157 AREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSE----SSSPRRERKKS 212
Query: 217 ALRAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSSENP 257
+ + K+R + E +K + S K++K K S S P
Sbjct: 213 SKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTP 253
>gi|190684675 X-ray repair cross complementing protein 1 [Homo
sapiens]
Length = 633
Score = 42.4 bits (98), Expect = 4e-04
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 26/139 (18%)
Query: 33 YRLGRRLLEQAHAPWLWDDWGPAGSSEDSASSESSGAGGPAPR------------CAPPS 80
+R+ RRL Q + GP SSE+ +S S G+G AP+
Sbjct: 390 HRMRRRLPSQRYLMA-----GPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAG 444
Query: 81 PPPPVEPATQEEAERRARGAPEEQDAEAGDAEAED--AEDAALPALPVKDVEDKPEQQTR 138
P P +P T EE + + E+ D E +E +D AED+ D ED+ +
Sbjct: 445 PSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSG-------DTEDELRRVAE 497
Query: 139 TRETDKSPTSTEPRQQPSA 157
+E P E + P A
Sbjct: 498 QKEHRLPPGQEENGEDPYA 516
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 42.4 bits (98), Expect = 4e-04
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 22/126 (17%)
Query: 54 PAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEA 113
PA S ASS S A P P P +P PP PA E +A+ P Q A G
Sbjct: 317 PAALSRAWASSWESEAA-PEPAAPPAAPSPPDSPA--EGRLVKAQYIPGAQAATRG---- 369
Query: 114 EDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRS 173
LP + KP TR R ++SP PR++P A RG R A S +R
Sbjct: 370 ----------LPGRAARRKPPPLTRGRSVEQSP----PRERPRAAGRRG-RMAEASGRRG 414
Query: 174 SSKIKE 179
S + ++
Sbjct: 415 SPRARK 420
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 42.0 bits (97), Expect = 6e-04
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 14/208 (6%)
Query: 53 GPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAE 112
G +GSS++ ++ + G VE +E+ E G EE++ E + E
Sbjct: 186 GSSGSSDEQGNNTENEEEGVEEDVEEDEE---VEEDAEEDEEVDEDGEEEEEEEEEEEEE 242
Query: 113 AEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQR 172
E+ E+ + +D+ +Q+ + D +++ + S F G+ ++
Sbjct: 243 EEEEEE--------EYEQDERDQKEEGNDYDTRSEASDSGSE-SVSFTDGSVRSGSGTDG 293
Query: 173 SSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKLV 232
S K KE K + ++ GS + + S HE S++RA + Q K K V
Sbjct: 294 SDEKKKERKRARGISPIVFDRS--GSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYV 351
Query: 233 AQRQRAHSVDVEKNRKMKASSSENPWMT 260
Q R + + + + ++ W T
Sbjct: 352 LQDARFFLIKSNNHENVSLAKAKGVWST 379
>gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo
sapiens]
Length = 331
Score = 41.6 bits (96), Expect = 7e-04
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 15/140 (10%)
Query: 42 QAHAPWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAP 101
QA P + W P S+ SS AP APP+P E + R A
Sbjct: 155 QARVP---EPWVPPSSAPREPSSPLPKFEAQAPPSAPPAPRAEAEVRPKIPGSREAAEND 211
Query: 102 EEQDAEA-GDAEAEDAEDAALPALPVKDVEDKPEQQTRTRE----TDKSPTSTEPRQQPS 156
EE+ EA G+A ED L + +++P ++ + R+ ++ P PR++
Sbjct: 212 EEEPGEATGEAVREDR-----VTLADRGPKERPRREGKPRKEKPRKEERPKKERPRKEER 266
Query: 157 ALFARGNRKAVKSPQRSSSK 176
AR R+A+ PQR S+
Sbjct: 267 PRAAREPREAL--PQRWESR 284
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 40.8 bits (94), Expect = 0.001
Identities = 25/101 (24%), Positives = 37/101 (36%)
Query: 51 DWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGD 110
D G +S E+ G G P R P P P E T E E +G P++ A +
Sbjct: 181 DVGNLDDFAESDEDEAHGPGAPEARARVPQPDPSRELKTLCEEEEEGQGRPQQAVASPSN 240
Query: 111 AEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEP 151
AE + PA P + + ++ P + P
Sbjct: 241 AEDTSPAPVSAPAPPARTSRGQGSERANEAGGQVGPEAPRP 281
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 54 PAGSSEDSASSESSGAGGPAPRC--APPSPPPPVEPATQEEAERRARGAPEEQDAEAGDA 111
P + E ++ AGG AP+ A +P PA EE + G P++ +A A A
Sbjct: 100 PPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKE-EGEPKKTEAPAAPA 158
Query: 112 EAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQ 171
E D A + + T ++P+ST Q P+A + K V++P
Sbjct: 159 AQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSSTPKAQGPAA--SAEEPKPVEAPA 216
Query: 172 RSSSK 176
+S +
Sbjct: 217 ANSDQ 221
Score = 31.6 bits (70), Expect = 0.76
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 23/152 (15%)
Query: 57 SSEDSASSESSGAGGPAPRCAPPSPP--------PPVEPATQEEAERRARGAPEEQDAEA 108
+ E +++ A AP+ P PP P ++ A A G + AEA
Sbjct: 66 AEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEA 125
Query: 109 GDAEAEDAEDAALPALPVKDVEDK--------PEQQTRT---RETDKSPTSTE----PRQ 153
A AE A AA ++ E K Q+T++ +D P S+E ++
Sbjct: 126 AAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKE 185
Query: 154 QPSALFARGNRKAVKSPQRSSSKIKENKHPFA 185
P+A A + + P S+ + K + P A
Sbjct: 186 TPAATEAPSSTPKAQGPAASAEEPKPVEAPAA 217
Score = 28.5 bits (62), Expect = 6.5
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 58 SEDSASSESSGAGGPAPRCAPPSPPPPVEP-ATQEEAERRARGAPEEQDAEAGDAEAEDA 116
+++ A + A G A P EP A E AE + +QDAE E E
Sbjct: 15 NDEKAKEKDKKAEGAATE--EEGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGE 72
Query: 117 EDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSS 175
+DAA A + + +PE+ E P P Q+ +A +A K+ + +++
Sbjct: 73 KDAA--AAKEEAPKAEPEKTEGAAEAKAEPPKA-PEQEQAAPGPAAGGEAPKAAEAAAA 128
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 40.0 bits (92), Expect = 0.002
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 54 PAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDA-- 111
PA + +AS ++ G PA AP + PVE E E G+P + EA A
Sbjct: 72 PAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAAS 131
Query: 112 --EAEDAEDAALPALPVKDVEDKPEQQTRTRETDK 144
+ AED A P+ P + K +++ +++ K
Sbjct: 132 STSSPKAEDGATPS-PSNETPKKKKKRFSFKKSFK 165
>gi|157649073 adenylyl cyclase-associated protein [Homo sapiens]
Length = 475
Score = 40.0 bits (92), Expect = 0.002
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 6/138 (4%)
Query: 49 WDDWGPAGSSEDSA-SSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAE 107
W GP S S+G+G P P PP PP + E A R A A Q
Sbjct: 207 WSKTGPVAKELSGLPSGPSAGSGPPPPPPGPPPPPVSTSSGSDESASRSALFAQINQGES 266
Query: 108 AGDAEAEDAEDAALPALPVKDVEDKPEQQ-TRTRETDKSPTSTEP----RQQPSALFARG 162
A ++D P + P + + K TS P +++P+ L G
Sbjct: 267 ITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPQTSPSPKRATKKEPAVLELEG 326
Query: 163 NRKAVKSPQRSSSKIKEN 180
+ V++ + S+ + E+
Sbjct: 327 KKWRVENQENVSNLVIED 344
>gi|5453595 adenylyl cyclase-associated protein [Homo sapiens]
Length = 475
Score = 40.0 bits (92), Expect = 0.002
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 6/138 (4%)
Query: 49 WDDWGPAGSSEDSA-SSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAE 107
W GP S S+G+G P P PP PP + E A R A A Q
Sbjct: 207 WSKTGPVAKELSGLPSGPSAGSGPPPPPPGPPPPPVSTSSGSDESASRSALFAQINQGES 266
Query: 108 AGDAEAEDAEDAALPALPVKDVEDKPEQQ-TRTRETDKSPTSTEP----RQQPSALFARG 162
A ++D P + P + + K TS P +++P+ L G
Sbjct: 267 ITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPQTSPSPKRATKKEPAVLELEG 326
Query: 163 NRKAVKSPQRSSSKIKEN 180
+ V++ + S+ + E+
Sbjct: 327 KKWRVENQENVSNLVIED 344
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 40.0 bits (92), Expect = 0.002
Identities = 48/224 (21%), Positives = 80/224 (35%), Gaps = 31/224 (13%)
Query: 42 QAHAPWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAP 101
+A AP + ++ G E E G + + + +E + + G
Sbjct: 514 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGG-------SEKEGSSEKEEGEQ 566
Query: 102 EEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQ-----------QTRTRETDKSPTSTE 150
EE + EA +AE E+AE A K VE+K E+ + E KSP
Sbjct: 567 EEGETEA-EAEGEEAE-----AKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKS 620
Query: 151 PRQQ-------PSALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHN 203
P ++ S + +G KSP K K P G +K +
Sbjct: 621 PVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKS 680
Query: 204 VCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHSVDVEKNR 247
+PV E A K ++ E+ K V + + V+ ++ +
Sbjct: 681 PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEK 724
Score = 29.6 bits (65), Expect = 2.9
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 34/119 (28%)
Query: 79 PSPPPPVEPAT----------QEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKD 128
P P PVE A +EE E+ + AP+E+ E + + +D + PVK+
Sbjct: 681 PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKE 740
Query: 129 ----------------------VEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRK 165
E KP QQ + +E +E ++ S A+G+RK
Sbjct: 741 EAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSE--EEGSDKGAKGSRK 797
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 40.0 bits (92), Expect = 0.002
Identities = 48/224 (21%), Positives = 80/224 (35%), Gaps = 31/224 (13%)
Query: 42 QAHAPWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAP 101
+A AP + ++ G E E G + + + +E + + G
Sbjct: 138 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGG-------SEKEGSSEKEEGEQ 190
Query: 102 EEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQ-----------QTRTRETDKSPTSTE 150
EE + EA +AE E+AE A K VE+K E+ + E KSP
Sbjct: 191 EEGETEA-EAEGEEAE-----AKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKS 244
Query: 151 PRQQ-------PSALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHN 203
P ++ S + +G KSP K K P G +K +
Sbjct: 245 PVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKS 304
Query: 204 VCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHSVDVEKNR 247
+PV E A K ++ E+ K V + + V+ ++ +
Sbjct: 305 PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEK 348
Score = 29.6 bits (65), Expect = 2.9
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 34/119 (28%)
Query: 79 PSPPPPVEPAT----------QEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKD 128
P P PVE A +EE E+ + AP+E+ E + + +D + PVK+
Sbjct: 305 PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKE 364
Query: 129 ----------------------VEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRK 165
E KP QQ + +E +E ++ S A+G+RK
Sbjct: 365 EAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSE--EEGSDKGAKGSRK 421
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 39.7 bits (91), Expect = 0.003
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 22/166 (13%)
Query: 82 PPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRE 141
PPPVEP +E+ E ++ +A A D E E E + + VK+ ++ E++ E
Sbjct: 487 PPPVEPEEEEDTE---DAGLDDWEAMASDEETEKVEGNKV-HIEVKENPEEEEEEEEEEE 542
Query: 142 TDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKT 201
D+ E + S S ++ S K + K + E +D K
Sbjct: 543 EDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTK- 601
Query: 202 HNVCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHSVDVEKNR 247
E K +R++EKR+L + + +V+ EK R
Sbjct: 602 -------------EERAYDKAKRRIEKRRL----EHSKNVNTEKLR 630
Score = 29.6 bits (65), Expect = 2.9
Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 7/132 (5%)
Query: 50 DDWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAG 109
DDW S E++ E G +P E +EE + + EE+ G
Sbjct: 504 DDWEAMASDEETEKVE----GNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEG 559
Query: 110 DAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKS 169
E+ E + K ++ KP ++ +D S + R + + + R+ K
Sbjct: 560 SEGDEEDEKVSDEKDSGKTLDKKPSKE---MSSDSEYDSDDDRTKEERAYDKAKRRIEKR 616
Query: 170 PQRSSSKIKENK 181
S + K
Sbjct: 617 RLEHSKNVNTEK 628
>gi|147902746 MEX3A protein [Homo sapiens]
Length = 520
Score = 39.7 bits (91), Expect = 0.003
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 68 GAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAALPALPVK 127
G G PA APP P PP PA A A A Q A + A DA L AL K
Sbjct: 66 GGGAPAQPAAPPQPAPPPPPAAPPAAPTAAPAAQTPQPPTA----PKGASDAKLCAL-YK 120
Query: 128 DVEDKPEQQTRTRETDKSPTS 148
+ E + + + T E PTS
Sbjct: 121 EAELRLKGSSNTTECVPVPTS 141
>gi|199559779 coiled-coil domain containing 8 [Homo sapiens]
Length = 538
Score = 39.3 bits (90), Expect = 0.004
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 23/192 (11%)
Query: 50 DDWGPAGSS--EDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRAR-GAPEEQDA 106
D G A S E++ + + GA G AP +EEA R GAP E+ A
Sbjct: 294 DQGGEAADSQREEAIADQREGAAGNQRAGAPADQGAEAADNQREEAADNQRAGAPAEEGA 353
Query: 107 EAGDAEAEDAEDAALPALPVKDVEDKPEQQT--RTRETDKSPTSTEPRQQPSALFARGNR 164
EA D + E+A D P D+ Q T E + + P Q S +
Sbjct: 354 EAADNQREEAADNQRAEAPA----DQRSQGTDNHREEAADNQRAEAPADQGSEVTDNQRE 409
Query: 165 KAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAP-VHEIHESALR---- 219
+AV + + ++ + A G++ ++ HN A AP + E SA +
Sbjct: 410 EAVHDQRERAPAVQGADNQRAQARAGQR-----AEAAHNQRAGAPGIQEAEVSAAQGTTG 464
Query: 220 ----AKNRRQVE 227
A+ R+QV+
Sbjct: 465 TAPGARARKQVK 476
>gi|130502140 NEZHA isoform 2 [Homo sapiens]
Length = 1249
Score = 38.9 bits (89), Expect = 0.005
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 31/216 (14%)
Query: 61 SASSESSGAGGPAPRCAPPSPPP-PVEPATQEEAERRARGA-PEEQDAEAGDA------- 111
S SS+S G PAP P PPP P + T EEA + A P A D
Sbjct: 429 SVSSDSLGPPRPAPARTPTQPPPEPGDLPTIEEALQIIHSAEPRLLPDGAADGSFYLHSP 488
Query: 112 EAEDAEDAALPALP---VKDVEDKPEQQTRTRETDKSPTSTEP-----RQQPSALFARGN 163
E A P LP K + D+P + ++P+ P +P A + G+
Sbjct: 489 EGPSKPSLASPYLPEGTSKPLSDRPTKAPVYMPHPETPSKPSPCLVGEASKPPAP-SEGS 547
Query: 164 RKAV-KSPQRSSSKIK-----ENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESA 217
KAV SP ++S++K E K E + GS + A E+ E +
Sbjct: 548 PKAVASSPAATNSEVKMTSFAERKKQLVK---AEAEAGAGSPTSTPAPPEALSSEMSELS 604
Query: 218 LRAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASS 253
R + +R R + AQ++R ++ + +++ S+
Sbjct: 605 ARLEEKR----RAIEAQKRRIEAIFAKHRQRLGKSA 636
>gi|122937255 NEZHA isoform 1 [Homo sapiens]
Length = 1276
Score = 38.9 bits (89), Expect = 0.005
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 31/216 (14%)
Query: 61 SASSESSGAGGPAPRCAPPSPPP-PVEPATQEEAERRARGA-PEEQDAEAGDA------- 111
S SS+S G PAP P PPP P + T EEA + A P A D
Sbjct: 456 SVSSDSLGPPRPAPARTPTQPPPEPGDLPTIEEALQIIHSAEPRLLPDGAADGSFYLHSP 515
Query: 112 EAEDAEDAALPALP---VKDVEDKPEQQTRTRETDKSPTSTEP-----RQQPSALFARGN 163
E A P LP K + D+P + ++P+ P +P A + G+
Sbjct: 516 EGPSKPSLASPYLPEGTSKPLSDRPTKAPVYMPHPETPSKPSPCLVGEASKPPAP-SEGS 574
Query: 164 RKAV-KSPQRSSSKIK-----ENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESA 217
KAV SP ++S++K E K E + GS + A E+ E +
Sbjct: 575 PKAVASSPAATNSEVKMTSFAERKKQLVK---AEAEAGAGSPTSTPAPPEALSSEMSELS 631
Query: 218 LRAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASS 253
R + +R R + AQ++R ++ + +++ S+
Sbjct: 632 ARLEEKR----RAIEAQKRRIEAIFAKHRQRLGKSA 663
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 38.9 bits (89), Expect = 0.005
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 36/157 (22%)
Query: 54 PAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEA 113
P G S + + G G P + A P PP V PAT A+ E+D+E+ E+
Sbjct: 422 PLGKSPQVKPASTMGMG-PLGKGAGPVPPGKVGPATPS-----AQVGKWEEDSESSSEES 475
Query: 114 EDAEDAALP----------------ALPVKDVEDKPEQQT--------------RTRETD 143
D+ D +P A P P Q+ + ++
Sbjct: 476 SDSSDGEVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSE 535
Query: 144 KSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKEN 180
+S S + + P+A+ A + A+K PQ + K N
Sbjct: 536 ESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTN 572
Score = 33.1 bits (74), Expect = 0.26
Identities = 51/207 (24%), Positives = 78/207 (37%), Gaps = 50/207 (24%)
Query: 55 AGSSEDS-ASSESSGAGGPAPRCA-------PP--------SPPPPVEPATQEEAE---R 95
AG +DS +SSE S + G AP PP SP P Q +A R
Sbjct: 849 AGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAASTPR 908
Query: 96 RARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQP 155
+AR + + + ++E ED A P R + + PR P
Sbjct: 909 KARASESTARSSSSESEDEDVIPATQCLTP------------GIRTNVVTMPTAHPRIAP 956
Query: 156 SALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHE 215
A A S + SS+I + G+KQ +Q + AS P + +
Sbjct: 957 KASMAGA------SSSKESSRISD----------GKKQEGPATQVSKKNPASLP---LTQ 997
Query: 216 SALRAKNRRQVEKRKLVAQRQRAHSVD 242
+AL+ ++ E + VA+ Q + VD
Sbjct: 998 AALKVLAQKASEAQPPVARTQPSSGVD 1024
Score = 32.0 bits (71), Expect = 0.58
Identities = 22/116 (18%), Positives = 43/116 (37%)
Query: 61 SASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAA 120
S + GA + +P P P A +A+ E+D+++ E++ E+A
Sbjct: 288 SGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAP 347
Query: 121 LPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSK 176
A P +E+ + + P ++ A+ + RSSS+
Sbjct: 348 AQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSE 403
Score = 28.5 bits (62), Expect = 6.5
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 61 SASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAA 120
+AS+ + G G APP V A+Q +A G PEE D+E+ E+ D+E+
Sbjct: 225 AASAPAKGTPGKGATPAPPGKAGAV--ASQTKA-----GKPEE-DSESSSEESSDSEEET 276
Query: 121 LPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQ 153
A + ++ K +T +P PR+
Sbjct: 277 PAAKAL--LQAKASGKTSQVGAASAPAKESPRK 307
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 38.9 bits (89), Expect = 0.005
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 36/157 (22%)
Query: 54 PAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEA 113
P G S + + G G P + A P PP V PAT A+ E+D+E+ E+
Sbjct: 499 PLGKSPQVKPASTMGMG-PLGKGAGPVPPGKVGPATPS-----AQVGKWEEDSESSSEES 552
Query: 114 EDAEDAALP----------------ALPVKDVEDKPEQQT--------------RTRETD 143
D+ D +P A P P Q+ + ++
Sbjct: 553 SDSSDGEVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSE 612
Query: 144 KSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKEN 180
+S S + + P+A+ A + A+K PQ + K N
Sbjct: 613 ESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTN 649
Score = 32.3 bits (72), Expect = 0.45
Identities = 45/199 (22%), Positives = 67/199 (33%), Gaps = 11/199 (5%)
Query: 53 GPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAE 112
G A SS + SS S P+ +T+E R+A AP + GD
Sbjct: 194 GQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAP----GKVGDVT 249
Query: 113 AEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEP---RQQPSALFARGNRKAVKS 169
+ A PA K KPE+++ + E P R Q A +A +
Sbjct: 250 PQVKGGALPPAKRAK----KPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASA 305
Query: 170 PQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKR 229
P + + P G QT G + + +S + E AK Q +
Sbjct: 306 PAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKAS 365
Query: 230 KLVAQRQRAHSVDVEKNRK 248
+Q A + E RK
Sbjct: 366 GKTSQVGAASAPAKESPRK 384
Score = 32.0 bits (71), Expect = 0.58
Identities = 22/116 (18%), Positives = 43/116 (37%)
Query: 61 SASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAA 120
S + GA + +P P P A +A+ E+D+++ E++ E+A
Sbjct: 365 SGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAP 424
Query: 121 LPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSK 176
A P +E+ + + P ++ A+ + RSSS+
Sbjct: 425 AQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSE 480
Score = 31.6 bits (70), Expect = 0.76
Identities = 49/219 (22%), Positives = 80/219 (36%), Gaps = 48/219 (21%)
Query: 55 AGSSEDS-ASSESSGAGGPAPRCA-------PP--------SPPPPVEPATQEEAE---R 95
AG +DS +SSE S + G AP PP SP P Q +A R
Sbjct: 926 AGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAASTPR 985
Query: 96 RARGAPEEQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQP 155
+AR + + + ++E ED A P R + + PR P
Sbjct: 986 KARASESTARSSSSESEDEDVIPATQCLTP------------GIRTNVVTMPTAHPRIAP 1033
Query: 156 SALFARGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHE 215
A A S + SS+I + G+KQ +Q + + P
Sbjct: 1034 KASMAGA------SSSKESSRISD----------GKKQEGPATQ-VDSAVGTLPATSPQS 1076
Query: 216 SALRAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSS 254
++++AK ++ K KL +Q + + + + + SS
Sbjct: 1077 TSVQAKGTNKLRKPKLPEVQQATKAPESSDDSEDSSDSS 1115
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.124 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,695,264
Number of Sequences: 37866
Number of extensions: 711468
Number of successful extensions: 13318
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 848
Number of HSP's that attempted gapping in prelim test: 8926
Number of HSP's gapped (non-prelim): 4169
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.