Search of human proteins with 187830909

Search of human proteins with 187830909

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|187830909 tumor protein p53 isoform f [Homo sapiens]
         (214 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|187830909 tumor protein p53 isoform f [Homo sapiens]               456   e-129
gi|187830823 tumor protein p53 isoform c [Homo sapiens]               456   e-129
gi|187830894 tumor protein p53 isoform d [Homo sapiens]               425   e-119
gi|187830777 tumor protein p53 isoform a [Homo sapiens]               425   e-119
gi|120407068 tumor protein p53 isoform a [Homo sapiens]               425   e-119
gi|187830901 tumor protein p53 isoform e [Homo sapiens]               424   e-119
gi|187830855 tumor protein p53 isoform b [Homo sapiens]               424   e-119
gi|169234665 tumor protein p63 isoform 6 [Homo sapiens]               216   9e-57
gi|169234663 tumor protein p63 isoform 5 [Homo sapiens]               216   9e-57
gi|169234661 tumor protein p63 isoform 4 [Homo sapiens]               216   9e-57
gi|169234659 tumor protein p63 isoform 3 [Homo sapiens]               216   9e-57
gi|169234657 tumor protein p63 isoform 2 [Homo sapiens]               216   9e-57
gi|31543818 tumor protein p63 isoform 1 [Homo sapiens]                216   9e-57
gi|187829052 tumor protein p73 isoform d [Homo sapiens]               214   4e-56
gi|187829017 tumor protein p73 isoform c [Homo sapiens]               214   4e-56
gi|187828902 tumor protein p73 isoform b [Homo sapiens]               214   4e-56
gi|4885645 tumor protein p73 isoform a [Homo sapiens]                 214   4e-56
gi|19923198 runt-related transcription factor 1 isoform AML1c [H...    31   0.69 
gi|49574546 runt-related transcription factor 1 isoform AML1b [H...    31   0.69 
gi|145309324 FH2 domain containing 1 [Homo sapiens]                    31   0.69 
gi|22094125 zinc finger protein 28 [Homo sapiens]                      30   1.2  
gi|27262667 colony stimulating factor 1 isoform a precursor [Hom...    30   1.5  
gi|27262663 colony stimulating factor 1 isoform b precursor [Hom...    30   1.5  
gi|27262661 colony stimulating factor 1 isoform a precursor [Hom...    30   1.5  
gi|169790837 runt-related transcription factor 1 isoform AML1a [...    30   1.5  
gi|224494026 tumor necrosis factor receptor superfamily, member ...    29   3.4  
gi|224494019 tumor necrosis factor receptor superfamily, member ...    29   3.4  
gi|55770840 chloride channel 3 isoform e [Homo sapiens]                29   3.4  
gi|55770838 chloride channel 3 isoform b [Homo sapiens]                29   3.4  
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ...    29   3.4  

>gi|187830909 tumor protein p53 isoform f [Homo sapiens]
          Length = 214

 Score =  456 bits (1174), Expect = e-129
 Identities = 214/214 (100%), Positives = 214/214 (100%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60
           MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ
Sbjct: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60

Query: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120
           HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL
Sbjct: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120

Query: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180
           TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT
Sbjct: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180

Query: 181 SSSPQPKKKPLDGEYFTLQMLLDLRWCYFLINSS 214
           SSSPQPKKKPLDGEYFTLQMLLDLRWCYFLINSS
Sbjct: 181 SSSPQPKKKPLDGEYFTLQMLLDLRWCYFLINSS 214


>gi|187830823 tumor protein p53 isoform c [Homo sapiens]
          Length = 346

 Score =  456 bits (1174), Expect = e-129
 Identities = 214/214 (100%), Positives = 214/214 (100%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60
           MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ
Sbjct: 133 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 192

Query: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120
           HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL
Sbjct: 193 HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 252

Query: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180
           TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT
Sbjct: 253 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 312

Query: 181 SSSPQPKKKPLDGEYFTLQMLLDLRWCYFLINSS 214
           SSSPQPKKKPLDGEYFTLQMLLDLRWCYFLINSS
Sbjct: 313 SSSPQPKKKPLDGEYFTLQMLLDLRWCYFLINSS 346


>gi|187830894 tumor protein p53 isoform d [Homo sapiens]
          Length = 261

 Score =  425 bits (1092), Expect = e-119
 Identities = 199/200 (99%), Positives = 200/200 (100%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60
           MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ
Sbjct: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60

Query: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120
           HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL
Sbjct: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120

Query: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180
           TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT
Sbjct: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180

Query: 181 SSSPQPKKKPLDGEYFTLQM 200
           SSSPQPKKKPLDGEYFTLQ+
Sbjct: 181 SSSPQPKKKPLDGEYFTLQI 200


>gi|187830777 tumor protein p53 isoform a [Homo sapiens]
          Length = 393

 Score =  425 bits (1092), Expect = e-119
 Identities = 199/200 (99%), Positives = 200/200 (100%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60
           MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ
Sbjct: 133 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 192

Query: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120
           HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL
Sbjct: 193 HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 252

Query: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180
           TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT
Sbjct: 253 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 312

Query: 181 SSSPQPKKKPLDGEYFTLQM 200
           SSSPQPKKKPLDGEYFTLQ+
Sbjct: 313 SSSPQPKKKPLDGEYFTLQI 332


>gi|120407068 tumor protein p53 isoform a [Homo sapiens]
          Length = 393

 Score =  425 bits (1092), Expect = e-119
 Identities = 199/200 (99%), Positives = 200/200 (100%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60
           MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ
Sbjct: 133 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 192

Query: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120
           HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL
Sbjct: 193 HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 252

Query: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180
           TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT
Sbjct: 253 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 312

Query: 181 SSSPQPKKKPLDGEYFTLQM 200
           SSSPQPKKKPLDGEYFTLQ+
Sbjct: 313 SSSPQPKKKPLDGEYFTLQI 332


>gi|187830901 tumor protein p53 isoform e [Homo sapiens]
          Length = 209

 Score =  424 bits (1091), Expect = e-119
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60
           MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ
Sbjct: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60

Query: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120
           HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL
Sbjct: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120

Query: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180
           TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT
Sbjct: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180

Query: 181 SSSPQPKKKPLDGEYFTLQ 199
           SSSPQPKKKPLDGEYFTLQ
Sbjct: 181 SSSPQPKKKPLDGEYFTLQ 199


>gi|187830855 tumor protein p53 isoform b [Homo sapiens]
          Length = 341

 Score =  424 bits (1091), Expect = e-119
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 60
           MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ
Sbjct: 133 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 192

Query: 61  HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 120
           HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL
Sbjct: 193 HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 252

Query: 121 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 180
           TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT
Sbjct: 253 TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 312

Query: 181 SSSPQPKKKPLDGEYFTLQ 199
           SSSPQPKKKPLDGEYFTLQ
Sbjct: 313 SSSPQPKKKPLDGEYFTLQ 331


>gi|169234665 tumor protein p63 isoform 6 [Homo sapiens]
          Length = 393

 Score =  216 bits (551), Expect = 9e-57
 Identities = 99/182 (54%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE--RCSDSDGLAP 58
           ++CQ+AKTCP+Q+ V + PP G  +RAM +YK+++H+TEVV+RCP+HE  R  +   +AP
Sbjct: 107 LYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQIAP 166

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
           P HLIRVEGN   +Y++D  T R SV+VPYEPP+VG++ TT+ YN+MCNSSC+GGMNRRP
Sbjct: 167 PSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQVGTEFTTVLYNFMCNSSCVGGMNRRP 226

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL I+TLE   G +LGR  FE R+CACPGRDR+ +E+++RK+           TKR    
Sbjct: 227 ILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSIRKQQVSDSTKNGDGTKRPFRQ 286

Query: 179 NT 180
           NT
Sbjct: 287 NT 288


>gi|169234663 tumor protein p63 isoform 5 [Homo sapiens]
          Length = 461

 Score =  216 bits (551), Expect = 9e-57
 Identities = 99/182 (54%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE--RCSDSDGLAP 58
           ++CQ+AKTCP+Q+ V + PP G  +RAM +YK+++H+TEVV+RCP+HE  R  +   +AP
Sbjct: 107 LYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQIAP 166

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
           P HLIRVEGN   +Y++D  T R SV+VPYEPP+VG++ TT+ YN+MCNSSC+GGMNRRP
Sbjct: 167 PSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQVGTEFTTVLYNFMCNSSCVGGMNRRP 226

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL I+TLE   G +LGR  FE R+CACPGRDR+ +E+++RK+           TKR    
Sbjct: 227 ILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSIRKQQVSDSTKNGDGTKRPFRQ 286

Query: 179 NT 180
           NT
Sbjct: 287 NT 288


>gi|169234661 tumor protein p63 isoform 4 [Homo sapiens]
          Length = 586

 Score =  216 bits (551), Expect = 9e-57
 Identities = 99/182 (54%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE--RCSDSDGLAP 58
           ++CQ+AKTCP+Q+ V + PP G  +RAM +YK+++H+TEVV+RCP+HE  R  +   +AP
Sbjct: 107 LYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQIAP 166

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
           P HLIRVEGN   +Y++D  T R SV+VPYEPP+VG++ TT+ YN+MCNSSC+GGMNRRP
Sbjct: 167 PSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQVGTEFTTVLYNFMCNSSCVGGMNRRP 226

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL I+TLE   G +LGR  FE R+CACPGRDR+ +E+++RK+           TKR    
Sbjct: 227 ILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSIRKQQVSDSTKNGDGTKRPFRQ 286

Query: 179 NT 180
           NT
Sbjct: 287 NT 288


>gi|169234659 tumor protein p63 isoform 3 [Homo sapiens]
          Length = 487

 Score =  216 bits (551), Expect = 9e-57
 Identities = 99/182 (54%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE--RCSDSDGLAP 58
           ++CQ+AKTCP+Q+ V + PP G  +RAM +YK+++H+TEVV+RCP+HE  R  +   +AP
Sbjct: 201 LYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQIAP 260

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
           P HLIRVEGN   +Y++D  T R SV+VPYEPP+VG++ TT+ YN+MCNSSC+GGMNRRP
Sbjct: 261 PSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQVGTEFTTVLYNFMCNSSCVGGMNRRP 320

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL I+TLE   G +LGR  FE R+CACPGRDR+ +E+++RK+           TKR    
Sbjct: 321 ILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSIRKQQVSDSTKNGDGTKRPFRQ 380

Query: 179 NT 180
           NT
Sbjct: 381 NT 382


>gi|169234657 tumor protein p63 isoform 2 [Homo sapiens]
          Length = 555

 Score =  216 bits (551), Expect = 9e-57
 Identities = 99/182 (54%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE--RCSDSDGLAP 58
           ++CQ+AKTCP+Q+ V + PP G  +RAM +YK+++H+TEVV+RCP+HE  R  +   +AP
Sbjct: 201 LYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQIAP 260

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
           P HLIRVEGN   +Y++D  T R SV+VPYEPP+VG++ TT+ YN+MCNSSC+GGMNRRP
Sbjct: 261 PSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQVGTEFTTVLYNFMCNSSCVGGMNRRP 320

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL I+TLE   G +LGR  FE R+CACPGRDR+ +E+++RK+           TKR    
Sbjct: 321 ILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSIRKQQVSDSTKNGDGTKRPFRQ 380

Query: 179 NT 180
           NT
Sbjct: 381 NT 382


>gi|31543818 tumor protein p63 isoform 1 [Homo sapiens]
          Length = 680

 Score =  216 bits (551), Expect = 9e-57
 Identities = 99/182 (54%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE--RCSDSDGLAP 58
           ++CQ+AKTCP+Q+ V + PP G  +RAM +YK+++H+TEVV+RCP+HE  R  +   +AP
Sbjct: 201 LYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQIAP 260

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
           P HLIRVEGN   +Y++D  T R SV+VPYEPP+VG++ TT+ YN+MCNSSC+GGMNRRP
Sbjct: 261 PSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQVGTEFTTVLYNFMCNSSCVGGMNRRP 320

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL I+TLE   G +LGR  FE R+CACPGRDR+ +E+++RK+           TKR    
Sbjct: 321 ILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSIRKQQVSDSTKNGDGTKRPFRQ 380

Query: 179 NT 180
           NT
Sbjct: 381 NT 382


>gi|187829052 tumor protein p73 isoform d [Homo sapiens]
          Length = 426

 Score =  214 bits (545), Expect = 4e-56
 Identities = 105/195 (53%), Positives = 139/195 (71%), Gaps = 6/195 (3%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSD-SDGL-AP 58
           ++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+HE   D ++G  AP
Sbjct: 102 LYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAP 161

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
             HLIRVEGN   +Y+DD  T R SVVVPYEPP+VG++ TTI YN+MCNSSC+GGMNRRP
Sbjct: 162 ASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRP 221

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL IITLE   G +LGR SFE R+CACPGRDR+ +E++ R++      L   S K    +
Sbjct: 222 ILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQ----QALNESSAKNGAAS 277

Query: 179 NTSSSPQPKKKPLDG 193
             +    P   P  G
Sbjct: 278 KRAFKQSPPAVPALG 292


>gi|187829017 tumor protein p73 isoform c [Homo sapiens]
          Length = 450

 Score =  214 bits (545), Expect = 4e-56
 Identities = 105/195 (53%), Positives = 139/195 (71%), Gaps = 6/195 (3%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSD-SDGL-AP 58
           ++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+HE   D ++G  AP
Sbjct: 102 LYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAP 161

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
             HLIRVEGN   +Y+DD  T R SVVVPYEPP+VG++ TTI YN+MCNSSC+GGMNRRP
Sbjct: 162 ASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRP 221

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL IITLE   G +LGR SFE R+CACPGRDR+ +E++ R++      L   S K    +
Sbjct: 222 ILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQ----QALNESSAKNGAAS 277

Query: 179 NTSSSPQPKKKPLDG 193
             +    P   P  G
Sbjct: 278 KRAFKQSPPAVPALG 292


>gi|187828902 tumor protein p73 isoform b [Homo sapiens]
          Length = 587

 Score =  214 bits (545), Expect = 4e-56
 Identities = 105/195 (53%), Positives = 139/195 (71%), Gaps = 6/195 (3%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSD-SDGL-AP 58
           ++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+HE   D ++G  AP
Sbjct: 102 LYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAP 161

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
             HLIRVEGN   +Y+DD  T R SVVVPYEPP+VG++ TTI YN+MCNSSC+GGMNRRP
Sbjct: 162 ASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRP 221

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL IITLE   G +LGR SFE R+CACPGRDR+ +E++ R++      L   S K    +
Sbjct: 222 ILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQ----QALNESSAKNGAAS 277

Query: 179 NTSSSPQPKKKPLDG 193
             +    P   P  G
Sbjct: 278 KRAFKQSPPAVPALG 292


>gi|4885645 tumor protein p73 isoform a [Homo sapiens]
          Length = 636

 Score =  214 bits (545), Expect = 4e-56
 Identities = 105/195 (53%), Positives = 139/195 (71%), Gaps = 6/195 (3%)

Query: 1   MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSD-SDGL-AP 58
           ++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+HE   D ++G  AP
Sbjct: 151 LYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAP 210

Query: 59  PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
             HLIRVEGN   +Y+DD  T R SVVVPYEPP+VG++ TTI YN+MCNSSC+GGMNRRP
Sbjct: 211 ASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRP 270

Query: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
           IL IITLE   G +LGR SFE R+CACPGRDR+ +E++ R++      L   S K    +
Sbjct: 271 ILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQ----QALNESSAKNGAAS 326

Query: 179 NTSSSPQPKKKPLDG 193
             +    P   P  G
Sbjct: 327 KRAFKQSPPAVPALG 341


>gi|19923198 runt-related transcription factor 1 isoform AML1c [Homo
           sapiens]
          Length = 480

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 149 DRRTEEENLRKKG---EPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQMLLDLR 205
           +R +E E LR+      PHH  P  + + +L ++T+ +PQP+ +  D    T Q+     
Sbjct: 223 ERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQD----TRQIQPSPP 278

Query: 206 WCY 208
           W Y
Sbjct: 279 WSY 281


>gi|49574546 runt-related transcription factor 1 isoform AML1b [Homo
           sapiens]
          Length = 453

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 149 DRRTEEENLRKKG---EPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQMLLDLR 205
           +R +E E LR+      PHH  P  + + +L ++T+ +PQP+ +  D    T Q+     
Sbjct: 196 ERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQD----TRQIQPSPP 251

Query: 206 WCY 208
           W Y
Sbjct: 252 WSY 254


>gi|145309324 FH2 domain containing 1 [Homo sapiens]
          Length = 1143

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 142  VCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGE 194
            V   PG  R   +  LR KG+P    P  S+        SS+  PKK+P   E
Sbjct: 1054 VAKAPGITRTVSQRQLRVKGDPEDAAPKDSSTL---RRASSARAPKKRPESAE 1103


>gi|22094125 zinc finger protein 28 [Homo sapiens]
          Length = 868

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 144 ACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLD 192
           A P R R      L  KG+     P G   RALP+  ++ PQ + K L+
Sbjct: 40  ALPARGRPRSRNGLASKGQ-RGAAPTGPGHRALPSRDTALPQERNKKLE 87


>gi|27262667 colony stimulating factor 1 isoform a precursor [Homo
           sapiens]
          Length = 554

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 152 TEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPL 191
           TE  +L    +P H + PGS K+  P +T  S +P + P+
Sbjct: 229 TEGSSLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPV 268


>gi|27262663 colony stimulating factor 1 isoform b precursor [Homo
           sapiens]
          Length = 438

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 152 TEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPL 191
           TE  +L    +P H + PGS K+  P +T  S +P + P+
Sbjct: 229 TEGSSLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPV 268


>gi|27262661 colony stimulating factor 1 isoform a precursor [Homo
           sapiens]
          Length = 554

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 152 TEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPL 191
           TE  +L    +P H + PGS K+  P +T  S +P + P+
Sbjct: 229 TEGSSLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPV 268


>gi|169790837 runt-related transcription factor 1 isoform AML1a
           [Homo sapiens]
          Length = 250

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 149 DRRTEEENLRKKG---EPHHELPPGSTKRALPNNTSSSPQPKKK 189
           +R +E E LR+      PHH  P  + + +L ++T+ +PQP+ +
Sbjct: 196 ERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQ 239


>gi|224494026 tumor necrosis factor receptor superfamily, member 10b
           isoform 2 precursor [Homo sapiens]
          Length = 411

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 35  QHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGN--LRVEYLDDRNT 79
           Q +    R  P  +R S S+GL PP H I  +G   +  +Y  D +T
Sbjct: 59  QDLAPQQRAAPQQKRSSPSEGLCPPGHHISEDGRDCISCKYGQDYST 105


>gi|224494019 tumor necrosis factor receptor superfamily, member 10b
           isoform 1 precursor [Homo sapiens]
          Length = 440

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 35  QHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGN--LRVEYLDDRNT 79
           Q +    R  P  +R S S+GL PP H I  +G   +  +Y  D +T
Sbjct: 59  QDLAPQQRAAPQQKRSSPSEGLCPPGHHISEDGRDCISCKYGQDYST 105


>gi|55770840 chloride channel 3 isoform e [Homo sapiens]
          Length = 866

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 80  FRHSVVVPYEPPEVGSDCTTIH-YNYMCNSSCMGGMNRRPILTIITLEDSSGNL 132
           + H   +  E  EVG+DC T   Y  +  ++C+GG+ R  +  ++ + + +G L
Sbjct: 551 YHHDWFIFKEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGL 604


>gi|55770838 chloride channel 3 isoform b [Homo sapiens]
          Length = 818

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 80  FRHSVVVPYEPPEVGSDCTTIH-YNYMCNSSCMGGMNRRPILTIITLEDSSGNL 132
           + H   +  E  EVG+DC T   Y  +  ++C+GG+ R  +  ++ + + +G L
Sbjct: 551 YHHDWFIFKEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGL 604


>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
           sapiens]
          Length = 1835

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 21/135 (15%)

Query: 51  SDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEP-PEVGSDCTTIHYNYMCNSS 109
           ++S G APP      E    + +LD+   F HS   P++  P VG     +H  Y    +
Sbjct: 2   ANSTGKAPPD-----ERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYT-RVT 55

Query: 110 CMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRT-------EEENLRKKGE 162
            +GG  +      ++ ++  G ++   +F  R C+      +        + E +   GE
Sbjct: 56  TLGGFAK------VSEKNQWGEIVEEFNFP-RSCSNAAFALKQYYLRYLEKYEKVHHFGE 108

Query: 163 PHHELPPGSTKRALP 177
              E+PPG+ K  LP
Sbjct: 109 DDDEVPPGNPKPQLP 123


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,513,577
Number of Sequences: 37866
Number of extensions: 518443
Number of successful extensions: 1605
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1564
Number of HSP's gapped (non-prelim): 46
length of query: 214
length of database: 18,247,518
effective HSP length: 98
effective length of query: 116
effective length of database: 14,536,650
effective search space: 1686251400
effective search space used: 1686251400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.