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Search of human proteins with 187761379
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187761379 maestro isoform c [Homo sapiens]
(210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187761379 maestro isoform c [Homo sapiens] 424 e-119
gi|187761381 maestro isoform d [Homo sapiens] 400 e-112
gi|187761377 maestro isoform b [Homo sapiens] 330 7e-91
gi|187761375 maestro isoform a [Homo sapiens] 305 1e-83
gi|154240671 HEAT repeat family member 7B2 [Homo sapiens] 79 3e-15
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 55 6e-08
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 55 6e-08
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 55 6e-08
gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5... 40 0.002
gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens] 40 0.002
gi|148727311 hypothetical protein LOC389690 [Homo sapiens] 32 0.51
gi|209969838 transportin 2 (importin 3, karyopherin beta 2b) iso... 31 0.87
gi|209969836 transportin 2 (importin 3, karyopherin beta 2b) iso... 31 0.87
gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isof... 31 0.87
gi|118498337 HECT domain containing 1 [Homo sapiens] 30 1.1
gi|157743280 parahox cluster neighbor [Homo sapiens] 30 1.1
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] 30 1.9
gi|13376768 elongation factor RNA polymerase II-like 3 [Homo sap... 30 1.9
gi|4826730 FK506 binding protein 12-rapamycin associated protein... 29 2.5
gi|23510381 transportin 1 isoform 2 [Homo sapiens] 29 2.5
gi|133925811 transportin 1 isoform 1 [Homo sapiens] 29 2.5
gi|48762926 PWP2 periodic tryptophan protein homolog [Homo sapiens] 29 3.3
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 28 4.3
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 28 4.3
gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens] 28 4.3
gi|122937347 pleckstrin homology domain containing, family M, me... 28 4.3
gi|109134351 zinc finger and BTB domain containing 44 [Homo sapi... 28 4.3
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 28 5.6
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 28 5.6
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 28 5.6
>gi|187761379 maestro isoform c [Homo sapiens]
Length = 210
Score = 424 bits (1091), Expect = e-119
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL 60
MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL
Sbjct: 1 MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL 60
Query: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV 120
KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV
Sbjct: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV 120
Query: 121 IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQS 180
IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQS
Sbjct: 121 IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQS 180
Query: 181 EEDQRNTKLYQQLSHYHPEILQFFYANKIL 210
EEDQRNTKLYQQLSHYHPEILQFFYANKIL
Sbjct: 181 EEDQRNTKLYQQLSHYHPEILQFFYANKIL 210
>gi|187761381 maestro isoform d [Homo sapiens]
Length = 262
Score = 400 bits (1028), Expect = e-112
Identities = 210/262 (80%), Positives = 210/262 (80%), Gaps = 52/262 (19%)
Query: 1 MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL 60
MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL
Sbjct: 1 MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL 60
Query: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV 120
KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV
Sbjct: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV 120
Query: 121 IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD----------------------- 157
IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD
Sbjct: 121 IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRK 180
Query: 158 -----------------------------ACKTTFQACSPYLKLKEEYSFQSEEDQRNTK 188
ACKTTFQACSPYLKLKEEYSFQSEEDQRNTK
Sbjct: 181 WKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTK 240
Query: 189 LYQQLSHYHPEILQFFYANKIL 210
LYQQLSHYHPEILQFFYANKIL
Sbjct: 241 LYQQLSHYHPEILQFFYANKIL 262
>gi|187761377 maestro isoform b [Homo sapiens]
Length = 196
Score = 330 bits (845), Expect = 7e-91
Identities = 163/164 (99%), Positives = 164/164 (100%)
Query: 47 QVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 106
+VSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD
Sbjct: 33 KVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 92
Query: 107 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQAC 166
LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQAC
Sbjct: 93 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQAC 152
Query: 167 SPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 210
SPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL
Sbjct: 153 SPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 196
>gi|187761375 maestro isoform a [Homo sapiens]
Length = 248
Score = 305 bits (782), Expect = 1e-83
Identities = 163/216 (75%), Positives = 164/216 (75%), Gaps = 52/216 (24%)
Query: 47 QVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 106
+VSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD
Sbjct: 33 KVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 92
Query: 107 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD--------- 157
LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD
Sbjct: 93 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA 152
Query: 158 -------------------------------------------ACKTTFQACSPYLKLKE 174
ACKTTFQACSPYLKLKE
Sbjct: 153 FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE 212
Query: 175 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 210
EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL
Sbjct: 213 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 248
>gi|154240671 HEAT repeat family member 7B2 [Homo sapiens]
Length = 1585
Score = 79.0 bits (193), Expect = 3e-15
Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 26 SSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRN 85
+S E+ +G++ S L + + WK L+NV ++ + A D +A R MA+R
Sbjct: 1272 TSSSENYRITGAAFFSELMKEPILWK-----HGNLRNVLILMDQSAWDSNATLRQMAIRG 1326
Query: 86 LGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFI 145
LG A AP KV+K+K+++L+ ++ GLY EV+ ES+K L +L + + + +F
Sbjct: 1327 LGNTASGAPHKVKKHKQLMLESIIRGLYHLARTEVVCESLKALKKILELLTDRDVSFYFK 1386
Query: 146 DITLQTRTLLDD 157
+I LQTRT +D
Sbjct: 1387 EIVLQTRTFFED 1398
>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1723
Score = 54.7 bits (130), Expect = 6e-08
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 57 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 114
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1420 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1479
Query: 115 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD 157
PV+ V E M+ LT +L +++ +GS F ++ Q R D+
Sbjct: 1480 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDN 1522
>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1706
Score = 54.7 bits (130), Expect = 6e-08
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 57 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 114
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1412 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1471
Query: 115 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD 157
PV+ V E M+ LT +L +++ +GS F ++ Q R D+
Sbjct: 1472 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDN 1514
>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1710
Score = 54.7 bits (130), Expect = 6e-08
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 57 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 114
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1416 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1475
Query: 115 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD 157
PV+ V E M+ LT +L +++ +GS F ++ Q R D+
Sbjct: 1476 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDN 1518
>gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5
[Homo sapiens]
Length = 1218
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 67 LAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVN--LEVIHES 124
LA R +D A R + +R L +A PDKVR + +L ++ GL D N V E+
Sbjct: 945 LAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEA 1004
Query: 125 MKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACS 167
M L ++ ++ L S + + ++ R D K F+ S
Sbjct: 1005 MLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSE-KMEFRTAS 1046
>gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens]
Length = 1641
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 67 LAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVN--LEVIHES 124
LA R +D A R + +R L +A PDKVR + +L ++ GL D N V E+
Sbjct: 1368 LAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEA 1427
Query: 125 MKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACS 167
M L ++ ++ L S + + ++ R D K F+ S
Sbjct: 1428 MLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSE-KMEFRTAS 1469
>gi|148727311 hypothetical protein LOC389690 [Homo sapiens]
Length = 1318
Score = 31.6 bits (70), Expect = 0.51
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 59 PLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNL 118
P + +LA+ DPS + R ++++ L + + PDK + + LL G + +
Sbjct: 1038 PKQAALTVLAQGLHDPSPEVRVLSLQGLSNILFH-PDKGSLLQGQLRPLLD-GFFQSSD- 1094
Query: 119 EVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD 157
+VI M T++ L ++ +G GS + + + TR+ +D
Sbjct: 1095 QVIVCIMGTVSDTLHRLGAQGTGSQSLGVAISTRSFFND 1133
>gi|209969838 transportin 2 (importin 3, karyopherin beta 2b)
isoform 1 [Homo sapiens]
Length = 897
Score = 30.8 bits (68), Expect = 0.87
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|209969836 transportin 2 (importin 3, karyopherin beta 2b)
isoform 3 [Homo sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 0.87
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isoform
2 [Homo sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 0.87
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|118498337 HECT domain containing 1 [Homo sapiens]
Length = 2610
Score = 30.4 bits (67), Expect = 1.1
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 5 SKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQ 47
S G GW LAT S PE G+ S SR L++ Q
Sbjct: 687 SNGSNGWFRFILDGKLATMYSSGSPEGGSDSSESRSEFLEKLQ 729
>gi|157743280 parahox cluster neighbor [Homo sapiens]
Length = 173
Score = 30.4 bits (67), Expect = 1.1
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 23 TRESSPPESGTGS---GSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDPSAKKR 79
T ES +SG G G+ RL E ++ RF F+LA R D +A R
Sbjct: 81 TAESQREQSGAGLRSLGADERLRLAELNAQYRARF-------GFPFVLAARFSDRTAVPR 133
Query: 80 HMAMRNLGTMAYEAPDKVRKYKKI 103
+A R L A E + + KKI
Sbjct: 134 ELARRLLCPSAQELRTALGEVKKI 157
>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
Length = 587
Score = 29.6 bits (65), Expect = 1.9
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 2 AWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLK 61
A+G G+QG+E L +SS T +E G G G + + K Q +
Sbjct: 123 AFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLAL 182
Query: 62 NVFFILAERARDPSAKKRHMAMRNLGTM 89
VF R + A A R +GT+
Sbjct: 183 KVFVAGRNRLENDGATALAEAFRVIGTL 210
>gi|13376768 elongation factor RNA polymerase II-like 3 [Homo
sapiens]
Length = 397
Score = 29.6 bits (65), Expect = 1.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 169 YLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANK 208
Y K +++Y EE +R L+Q+LSH IL+F N+
Sbjct: 356 YKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKNR 395
>gi|4826730 FK506 binding protein 12-rapamycin associated protein 1
[Homo sapiens]
Length = 2549
Score = 29.3 bits (64), Expect = 2.5
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDP---VN 117
K + IL E + + + R LG + AP +R Y + +L L+ L DP N
Sbjct: 732 KMLIQILTELEHSGIGRIKEQSARMLGHLVSNAPRLIRPYMEPILKALILKLKDPDPDPN 791
Query: 118 LEVIHESMKT---LTVVLGKIQGKGLGSFFIDI--TLQTRTLL 155
VI+ + T L V G K + FI I LQ +LL
Sbjct: 792 PGVINNVLATIGELAQVSGLEMRKWVDELFIIIMDMLQDSSLL 834
>gi|23510381 transportin 1 isoform 2 [Homo sapiens]
Length = 890
Score = 29.3 bits (64), Expect = 2.5
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL--YDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV+ Y N
Sbjct: 478 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN 537
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 538 LLILYDAIGTLADSVG 553
>gi|133925811 transportin 1 isoform 1 [Homo sapiens]
Length = 898
Score = 29.3 bits (64), Expect = 2.5
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL--YDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV+ Y N
Sbjct: 486 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN 545
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 546 LLILYDAIGTLADSVG 561
>gi|48762926 PWP2 periodic tryptophan protein homolog [Homo sapiens]
Length = 919
Score = 28.9 bits (63), Expect = 3.3
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 74 PSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 114
P +K + N+ M Y AP K R++ VLD +G YD
Sbjct: 106 PDGRKFVVTKGNIAQM-YHAPGKKREFNAFVLDKTYFGPYD 145
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 28.5 bits (62), Expect = 4.3
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Query: 9 QGWENLAESSHLATTRESSPPESGTGSGSS 38
QG+EN AE+ +TR P +G GSGSS
Sbjct: 233 QGFENTAETLRALSTR----PSAGAGSGSS 258
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 28.5 bits (62), Expect = 4.3
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Query: 9 QGWENLAESSHLATTRESSPPESGTGSGSS 38
QG+EN AE+ +TR P +G GSGSS
Sbjct: 207 QGFENTAETLRALSTR----PSAGAGSGSS 232
>gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens]
Length = 570
Score = 28.5 bits (62), Expect = 4.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 26 SSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDP 74
S+ E+GT SG R ++ +W L +P++N+ +L+ RDP
Sbjct: 86 SNSSETGTASGLVFILRPEQSTCTWYLGTSGIQPVQNMAILLSYSERDP 134
>gi|122937347 pleckstrin homology domain containing, family M,
member 3 [Homo sapiens]
Length = 761
Score = 28.5 bits (62), Expect = 4.3
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 19/126 (15%)
Query: 95 DKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVL----------GKIQGKGLGSFF 144
D ++Y+ I+ +Y L + + K T VL GK+ L S+
Sbjct: 354 DSSKQYQNILKSGTLYRL-------TVQNNWKAFTFVLSRAYLMAFQPGKLDEDPLLSYN 406
Query: 145 IDITLQTRTLLDDACKTTFQACSP--YLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ 202
+D+ L + D C + FQ P L+L+ E +++E K+ ++ + LQ
Sbjct: 407 VDVCLAVQMDNLDGCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKIAANVARSSEQNLQ 466
Query: 203 FFYANK 208
NK
Sbjct: 467 VTLRNK 472
>gi|109134351 zinc finger and BTB domain containing 44 [Homo
sapiens]
Length = 453
Score = 28.5 bits (62), Expect = 4.3
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 122 HESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQSE 181
H S +LGK+ F DIT++ + + A K ACS + + K Q+E
Sbjct: 8 HSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTK--LVGQAE 65
Query: 182 EDQRN 186
++ +N
Sbjct: 66 DENKN 70
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 28.1 bits (61), Expect = 5.6
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 15 AESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDP 74
++SS ++ R SS S + SGSS S +S + P + + R P
Sbjct: 23 SDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQQQ------PQPRSP 76
Query: 75 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL----YDPVNLEVIHESMKTLTV 130
+A++ R A +R+ +L++G+ Y P V ++ K V
Sbjct: 77 AARRAAARSRAA------AAGGMRRDPAPGFSMLLFGVSLACYSPSLKSVQDQAYKAPVV 130
Query: 131 VLGKIQG 137
V GK+QG
Sbjct: 131 VEGKVQG 137
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 28.1 bits (61), Expect = 5.6
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 15 AESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDP 74
++SS ++ R SS S + SGSS S +S + P + + R P
Sbjct: 23 SDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQQQ------PQPRSP 76
Query: 75 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL----YDPVNLEVIHESMKTLTV 130
+A++ R A +R+ +L++G+ Y P V ++ K V
Sbjct: 77 AARRAAARSRAA------AAGGMRRDPAPGFSMLLFGVSLACYSPSLKSVQDQAYKAPVV 130
Query: 131 VLGKIQG 137
V GK+QG
Sbjct: 131 VEGKVQG 137
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 28.1 bits (61), Expect = 5.6
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 15 AESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDP 74
++SS ++ R SS S + SGSS S +S + P + + R P
Sbjct: 23 SDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQQQ------PQPRSP 76
Query: 75 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL----YDPVNLEVIHESMKTLTV 130
+A++ R A +R+ +L++G+ Y P V ++ K V
Sbjct: 77 AARRAAARSRAA------AAGGMRRDPAPGFSMLLFGVSLACYSPSLKSVQDQAYKAPVV 130
Query: 131 VLGKIQG 137
V GK+QG
Sbjct: 131 VEGKVQG 137
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,016,786
Number of Sequences: 37866
Number of extensions: 336340
Number of successful extensions: 1283
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1255
Number of HSP's gapped (non-prelim): 45
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.