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Search of human proteins with 187761341
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187761341 acyl-CoA thioesterase 4 [Homo sapiens]
(421 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187761341 acyl-CoA thioesterase 4 [Homo sapiens] 868 0.0
gi|81230485 acyl-CoA thioesterase 1 [Homo sapiens] 622 e-178
gi|148727286 acyl-CoA thioesterase 2 [Homo sapiens] 621 e-178
gi|189083866 bile acid Coenzyme A: amino acid N-acyltransferase ... 322 3e-88
gi|4502351 bile acid Coenzyme A: amino acid N-acyltransferase [H... 322 3e-88
gi|81230487 acyl-CoA thioesterase 6 [Homo sapiens] 230 2e-60
gi|169204669 PREDICTED: hypothetical protein LOC400027 [Homo sap... 31 2.4
gi|89036097 PREDICTED: hypothetical protein LOC400027 isoform 4 ... 31 2.4
gi|89035494 PREDICTED: hypothetical protein LOC400027 isoform 2 ... 31 2.4
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens] 31 2.4
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens] 30 4.1
gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens] 30 4.1
gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens] 30 4.1
gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens] 30 4.1
gi|126352608 elastin isoform e precursor [Homo sapiens] 29 7.0
gi|126352446 elastin isoform d precursor [Homo sapiens] 29 7.0
gi|126352322 elastin isoform c precursor [Homo sapiens] 29 7.0
gi|126352700 elastin isoform b precursor [Homo sapiens] 29 7.0
gi|126352440 elastin isoform a precursor [Homo sapiens] 29 7.0
>gi|187761341 acyl-CoA thioesterase 4 [Homo sapiens]
Length = 421
Score = 868 bits (2244), Expect = 0.0
Identities = 421/421 (100%), Positives = 421/421 (100%)
Query: 1 MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGEL 60
MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGEL
Sbjct: 1 MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGEL 60
Query: 61 DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL 120
DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL 120
Query: 121 CQAQHERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG 180
CQAQHERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG
Sbjct: 121 CQAQHERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG 180
Query: 181 HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS 240
HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS
Sbjct: 181 HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS 240
Query: 241 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV 300
MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV
Sbjct: 241 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV 300
Query: 301 GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 360
GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH
Sbjct: 301 GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 360
Query: 361 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK 420
YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK
Sbjct: 361 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK 420
Query: 421 L 421
L
Sbjct: 421 L 421
>gi|81230485 acyl-CoA thioesterase 1 [Homo sapiens]
Length = 421
Score = 622 bits (1603), Expect = e-178
Identities = 296/421 (70%), Positives = 341/421 (80%)
Query: 1 MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGEL 60
M+ATLILEP GRCCW+EPVRIAVRGLAPEQ VTLRASLRDEKGALF+AHARY AD GEL
Sbjct: 1 MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL 60
Query: 61 DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL 120
DLERAPALGGSFAGLEPMGLLWALEPEKP R +KRDV+ P VELEVLDGHDP+PGRLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL 120
Query: 121 CQAQHERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG 180
C+ +HER+FLPPGVRR+ VRAGRVR TLFLPP PGPFPGI+D+FG GGGLLEYRASLLAG
Sbjct: 121 CRVRHERYFLPPGVRREPVRAGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG 180
Query: 181 HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS 240
GFA +ALAYYN+EDLP M+ + LEYFEEAV Y+L HP+VKGPG+GLLGIS G ++CLS
Sbjct: 181 KGFAVMALAYYNYEDLPKTMETLHLEYFEEAVNYLLSHPEVKGPGVGLLGISKGGELCLS 240
Query: 241 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV 300
MASFLK ++A V INGS + + YK ++PP+G + RIKV G DIVD+ N+ +
Sbjct: 241 MASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 300
Query: 301 GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 360
G S IP+E+A+ L +VGQDDHNW+SE YA +RLQAHG+ KPQIICYP TGH
Sbjct: 301 EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 360
Query: 361 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK 420
YIEPPYFPLC ASLH L+ +IWGGEPRAH+ AQ DAWKQ+ FF KHLGG + T K
Sbjct: 361 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 420
Query: 421 L 421
+
Sbjct: 421 V 421
>gi|148727286 acyl-CoA thioesterase 2 [Homo sapiens]
Length = 483
Score = 621 bits (1601), Expect = e-178
Identities = 295/421 (70%), Positives = 341/421 (80%)
Query: 1 MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGEL 60
M+ATLILEP GRCCW+EPVRIAVRGLAPEQ VTLRASLRDEKGALF+AHARY AD GEL
Sbjct: 63 MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL 122
Query: 61 DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL 120
DLERAPALGGSFAGLEPMGLLWALEPEKP R +KRDV+ P VELEVLDGHDP+PGRLL
Sbjct: 123 DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL 182
Query: 121 CQAQHERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG 180
CQ +HER+FLPPGVRR+ VR GRVR TLFLPP PGPFPGI+D+FG GGGLLEYRASLLAG
Sbjct: 183 CQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG 242
Query: 181 HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS 240
GFA +ALAYYN+EDLP M+ + LEYFEEA+ Y+L HP+VKGPG+GLLGIS G ++CLS
Sbjct: 243 KGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLS 302
Query: 241 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV 300
MASFLK ++A V INGS + ++YK ++PP+G + RIKV G DIVD+ N+ +
Sbjct: 303 MASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 362
Query: 301 GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 360
G S IP+E+A+ L +VGQDDHNW+SE YA +RLQAHG+ KPQIICYP TGH
Sbjct: 363 EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 422
Query: 361 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK 420
YIEPPYFPLC ASLH L+ +IWGGEPRAH+ AQ DAWKQ+ FF KHLGG + T K
Sbjct: 423 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 482
Query: 421 L 421
+
Sbjct: 483 V 483
>gi|189083866 bile acid Coenzyme A: amino acid N-acyltransferase
[Homo sapiens]
Length = 418
Score = 322 bits (826), Expect = 3e-88
Identities = 185/406 (45%), Positives = 241/406 (59%), Gaps = 20/406 (4%)
Query: 16 NEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGELDLERAPALGGSFAGL 75
+EPV I GL P Q V+ +ASL DE G +F + A Y A+ GE+DL A +LGG + G+
Sbjct: 14 DEPVHIRATGLIPFQMVSFQASLEDENGDMFYSQAHYRANEFGEVDLNHASSLGGDYMGV 73
Query: 76 EPMGLLWALEPEKPFWRFLKRDVQI-PFVVELEVLD---------GHDPEPGRLLCQAQH 125
PMGL W+L+PEK R LKRDV PF V++++ D P+ L
Sbjct: 74 HPMGLFWSLKPEKLLTRLLKRDVMNRPFQVQVKLYDLELIVNNKVASAPKASLTL----- 128
Query: 126 ERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAGHGFAT 185
ER ++ PGV R VR GR+R LFLPPG G FPG+ID+FG GGLLE+RASLLA GFA+
Sbjct: 129 ERWYVAPGVTRIKVREGRLRGALFLPPGEGLFPGVIDLFGGLGGLLEFRASLLASRGFAS 188
Query: 186 LALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFL 245
LALAY+N+EDLP + LEYFEEA ++L+HP+V G G+G++ + G I LSMA +L
Sbjct: 189 LALAYHNYEDLPRKPEVTDLEYFEEAANFLLRHPKVFGSGVGVVSVCQGVQIGLSMAIYL 248
Query: 246 KNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIV-DIRNALVGGYK 304
K V+ATV ING+ Y PL + + I GL+++ VG
Sbjct: 249 KQVTATVLINGTNFPFGIPQVYHGQIHQPLPHSAQLISTNALGLLELYRTFETTQVGA-- 306
Query: 305 NPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEP 364
+ + PIE+AQG L IVG+ D S+ +A+ +L+ HGK ++ YPG GH IEP
Sbjct: 307 SQYLFPIEEAQGQFLFIVGEGDKTINSKAHAEQAIGQLKRHGKNNWTLLSYPGAGHLIEP 366
Query: 365 PYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL 410
PY PLC AS L H WGGE H+ AQE AWK+I F KHL
Sbjct: 367 PYSPLCCASTTHDLRLH--WGGEVIPHAAAQEHAWKEIQRFLRKHL 410
>gi|4502351 bile acid Coenzyme A: amino acid N-acyltransferase [Homo
sapiens]
Length = 418
Score = 322 bits (826), Expect = 3e-88
Identities = 185/406 (45%), Positives = 241/406 (59%), Gaps = 20/406 (4%)
Query: 16 NEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGELDLERAPALGGSFAGL 75
+EPV I GL P Q V+ +ASL DE G +F + A Y A+ GE+DL A +LGG + G+
Sbjct: 14 DEPVHIRATGLIPFQMVSFQASLEDENGDMFYSQAHYRANEFGEVDLNHASSLGGDYMGV 73
Query: 76 EPMGLLWALEPEKPFWRFLKRDVQI-PFVVELEVLD---------GHDPEPGRLLCQAQH 125
PMGL W+L+PEK R LKRDV PF V++++ D P+ L
Sbjct: 74 HPMGLFWSLKPEKLLTRLLKRDVMNRPFQVQVKLYDLELIVNNKVASAPKASLTL----- 128
Query: 126 ERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAGHGFAT 185
ER ++ PGV R VR GR+R LFLPPG G FPG+ID+FG GGLLE+RASLLA GFA+
Sbjct: 129 ERWYVAPGVTRIKVREGRLRGALFLPPGEGLFPGVIDLFGGLGGLLEFRASLLASRGFAS 188
Query: 186 LALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFL 245
LALAY+N+EDLP + LEYFEEA ++L+HP+V G G+G++ + G I LSMA +L
Sbjct: 189 LALAYHNYEDLPRKPEVTDLEYFEEAANFLLRHPKVFGSGVGVVSVCQGVQIGLSMAIYL 248
Query: 246 KNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIV-DIRNALVGGYK 304
K V+ATV ING+ Y PL + + I GL+++ VG
Sbjct: 249 KQVTATVLINGTNFPFGIPQVYHGQIHQPLPHSAQLISTNALGLLELYRTFETTQVGA-- 306
Query: 305 NPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEP 364
+ + PIE+AQG L IVG+ D S+ +A+ +L+ HGK ++ YPG GH IEP
Sbjct: 307 SQYLFPIEEAQGQFLFIVGEGDKTINSKAHAEQAIGQLKRHGKNNWTLLSYPGAGHLIEP 366
Query: 365 PYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL 410
PY PLC AS L H WGGE H+ AQE AWK+I F KHL
Sbjct: 367 PYSPLCCASTTHDLRLH--WGGEVIPHAAAQEHAWKEIQRFLRKHL 410
>gi|81230487 acyl-CoA thioesterase 6 [Homo sapiens]
Length = 207
Score = 230 bits (587), Expect = 2e-60
Identities = 112/207 (54%), Positives = 144/207 (69%)
Query: 215 MLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAINYKHSSIPP 274
MLQHP+VKGP I LLG S G D+CLSMASFLK ++ATV IN + ++YK IP
Sbjct: 1 MLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANTVAPLHYKDMIIPK 60
Query: 275 LGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELY 334
L DL ++K+ SG + +D + + + + S++P+EKAQ P L IVG DD +W+SE Y
Sbjct: 61 LVDDLGKVKITKSGFLTFMDTWSNPLEEHNHQSLVPLEKAQVPFLFIVGMDDQSWKSEFY 120
Query: 335 AQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKA 394
AQ SERLQAHGKE+PQIICYP TGH I+PPYFP AS+H +L + + +GGEP+AHSKA
Sbjct: 121 AQIASERLQAHGKERPQIICYPETGHCIDPPYFPPSRASVHAVLGEAIFYGGEPKAHSKA 180
Query: 395 QEDAWKQILAFFCKHLGGTQKTAVPKL 421
Q DAW+QI FF KHL G + K+
Sbjct: 181 QVDAWQQIQTFFHKHLNGKKSVKHSKI 207
>gi|169204669 PREDICTED: hypothetical protein LOC400027 [Homo
sapiens]
Length = 120
Score = 30.8 bits (68), Expect = 2.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 329 WRSELYAQTVSERLQAHGKEKP----QIICYPGTGHYIEPPYFPLCPAS 373
W SEL ++ L A P Q +PG GH I+P Y P PA+
Sbjct: 2 WASELRGPGCADSLNAALAHSPLRNRQCRGFPGGGHSIQPLYTPRAPAA 50
>gi|89036097 PREDICTED: hypothetical protein LOC400027 isoform 4
[Homo sapiens]
Length = 120
Score = 30.8 bits (68), Expect = 2.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 329 WRSELYAQTVSERLQAHGKEKP----QIICYPGTGHYIEPPYFPLCPAS 373
W SEL ++ L A P Q +PG GH I+P Y P PA+
Sbjct: 2 WASELRGPGCADSLNAALAHSPLRNRQCRGFPGGGHSIQPLYTPRAPAA 50
>gi|89035494 PREDICTED: hypothetical protein LOC400027 isoform 2
[Homo sapiens]
Length = 120
Score = 30.8 bits (68), Expect = 2.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 329 WRSELYAQTVSERLQAHGKEKP----QIICYPGTGHYIEPPYFPLCPAS 373
W SEL ++ L A P Q +PG GH I+P Y P PA+
Sbjct: 2 WASELRGPGCADSLNAALAHSPLRNRQCRGFPGGGHSIQPLYTPRAPAA 50
>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
Length = 1159
Score = 30.8 bits (68), Expect = 2.4
Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 111 GHDPEPGRLLCQAQHERHFLPPGVRRQSVRAGRVRATLFLPPG-PGPFPG 159
G PEPGRL AQ R P R G R PG PGP PG
Sbjct: 50 GRSPEPGRLGPHAQLTRVPRSPPAGRAEPGGGEDRQARGTEPGAPGPSPG 99
>gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]
Length = 618
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 109 LDGHDPEPGRLLCQAQHERHFLPPGV--RRQSVRAGRVRATLFLPPGPGP 156
L+ PEPGRL H + PP V R+ + RA F GPGP
Sbjct: 241 LEPDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGP 290
>gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens]
Length = 589
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 109 LDGHDPEPGRLLCQAQHERHFLPPGV--RRQSVRAGRVRATLFLPPGPGP 156
L+ PEPGRL H + PP V R+ + RA F GPGP
Sbjct: 212 LEPDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGP 261
>gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 109 LDGHDPEPGRLLCQAQHERHFLPPGV--RRQSVRAGRVRATLFLPPGPGP 156
L+ PEPGRL H + PP V R+ + RA F GPGP
Sbjct: 184 LEPDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGP 233
>gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 109 LDGHDPEPGRLLCQAQHERHFLPPGV--RRQSVRAGRVRATLFLPPGPGP 156
L+ PEPGRL H + PP V R+ + RA F GPGP
Sbjct: 184 LEPDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGP 233
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 29.3 bits (64), Expect = 7.0
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 64 RAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDP---EPGRLL 120
+AP +GG+FAG+ +G +P P +K ++P L G P PG +
Sbjct: 178 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAP-KLPGGYGLPYTTGKLPYGYGPGGVA 236
Query: 121 CQAQHERHFLPPGVRRQSVRAGRVRATL--------FLP-------PG-PGPFPGIIDIF 164
A + GV Q+ A +A LP PG PG PGI I
Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 296
Query: 165 GIG 167
G+G
Sbjct: 297 GVG 299
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 29.3 bits (64), Expect = 7.0
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 64 RAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDP---EPGRLL 120
+AP +GG+FAG+ +G +P P +K ++P L G P PG +
Sbjct: 183 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAP-KLPGGYGLPYTTGKLPYGYGPGGVA 241
Query: 121 CQAQHERHFLPPGVRRQSVRAGRVRATL--------FLP-------PG-PGPFPGIIDIF 164
A + GV Q+ A +A LP PG PG PGI I
Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 301
Query: 165 GIG 167
G+G
Sbjct: 302 GVG 304
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 29.3 bits (64), Expect = 7.0
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 64 RAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDP---EPGRLL 120
+AP +GG+FAG+ +G +P P +K ++P L G P PG +
Sbjct: 183 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAP-KLPGGYGLPYTTGKLPYGYGPGGVA 241
Query: 121 CQAQHERHFLPPGVRRQSVRAGRVRATL--------FLP-------PG-PGPFPGIIDIF 164
A + GV Q+ A +A LP PG PG PGI I
Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 301
Query: 165 GIG 167
G+G
Sbjct: 302 GVG 304
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 29.3 bits (64), Expect = 7.0
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 64 RAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDP---EPGRLL 120
+AP +GG+FAG+ +G +P P +K ++P L G P PG +
Sbjct: 168 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAP-KLPGGYGLPYTTGKLPYGYGPGGVA 226
Query: 121 CQAQHERHFLPPGVRRQSVRAGRVRATL--------FLP-------PG-PGPFPGIIDIF 164
A + GV Q+ A +A LP PG PG PGI I
Sbjct: 227 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 286
Query: 165 GIG 167
G+G
Sbjct: 287 GVG 289
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 29.3 bits (64), Expect = 7.0
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 64 RAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDP---EPGRLL 120
+AP +GG+FAG+ +G +P P +K ++P L G P PG +
Sbjct: 178 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAP-KLPGGYGLPYTTGKLPYGYGPGGVA 236
Query: 121 CQAQHERHFLPPGVRRQSVRAGRVRATL--------FLP-------PG-PGPFPGIIDIF 164
A + GV Q+ A +A LP PG PG PGI I
Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 296
Query: 165 GIG 167
G+G
Sbjct: 297 GVG 299
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.142 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,172,387
Number of Sequences: 37866
Number of extensions: 967445
Number of successful extensions: 2038
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2008
Number of HSP's gapped (non-prelim): 32
length of query: 421
length of database: 18,247,518
effective HSP length: 105
effective length of query: 316
effective length of database: 14,271,588
effective search space: 4509821808
effective search space used: 4509821808
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.