Guide to the Human Genome
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Name: ACOT6 Sequence: fasta or formatted (207aa) NCBI GI: 81230487
Description:

acyl-CoA thioesterase 6

Referenced in:

Peroxisomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         16           1
 C cysteine            1.9          4           1
 D aspartate           4.3          9           2
 E glutamate           4.3          9           2
 F phenylalanine       5.3         11           2
 G glycine             6.8         14           2
 H histidine           5.3         11           1
 I isoleucine          6.8         14           2
 K lysine              9.2         19           2
 L leucine             8.7         18           2
 M methionine          2.4          5           1
 N asparagine          2.4          5           1
 P proline             6.8         14           2
 Q glutamine           5.3         11           2
 R arginine            1.4          3           1
 S serine              7.2         15           1
 T threonine           3.9          8           1
 V valine              6.3         13           1
 W tryptophan          1.4          3           1
 Y tyrosine            2.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA thioesterase 6 
ACOT2                 0.592   acyl-CoA thioesterase 2 
ACOT1                 0.584   acyl-CoA thioesterase 1 
ACOT4                 0.507   acyl-CoA thioesterase 4 
BAAT                  0.220   bile acid Coenzyme A: amino acid N-acyltransferase ...
BAAT                  0.220   bile acid Coenzyme A: amino acid N-acyltransferase [H...
ACHE                  0.012   acetylcholinesterase isoform E4-E6 precursor 
ACHE                  0.012   acetylcholinesterase isoform E4-E5 precursor 
LOC100288473          0.010   PREDICTED: hypothetical protein XP_002343336 
ANK2                  0.010   ankyrin 2 isoform 3 
ANK2                  0.010   ankyrin 2 isoform 2 
ANK2                  0.010   ankyrin 2 isoform 1 
EIF4G2                0.010   eukaryotic translation initiation factor 4 gamma, 2...
EIF4G2                0.010   eukaryotic translation initiation factor 4 gamma, 2 i...
FRAS1                 0.007   Fraser syndrome 1 
PKN1                  0.007   protein kinase N1 isoform 1 
PKN1                  0.007   protein kinase N1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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