Guide to the Human Genome
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Name: ACOT2 Sequence: fasta or formatted (483aa) NCBI GI: 148727286
Description:

acyl-CoA thioesterase 2

Referenced in:

Peroxisomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         41           2
 C cysteine            1.4          7           2
 D aspartate           3.5         17           2
 E glutamate           6.8         33           2
 F phenylalanine       3.7         18           2
 G glycine             9.5         46           3
 H histidine           3.3         16           1
 I isoleucine          3.5         17           2
 K lysine              4.3         21           1
 L leucine            12.2         59           2
 M methionine          2.1         10           1
 N asparagine          2.1         10           1
 P proline             8.3         40           2
 Q glutamine           3.1         15           1
 R arginine            7.0         34           2
 S serine              5.4         26           2
 T threonine           3.5         17           1
 V valine              7.2         35           2
 W tryptophan          1.2          6           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA thioesterase 2 
ACOT1                 0.867   acyl-CoA thioesterase 1 
ACOT4                 0.620   acyl-CoA thioesterase 4 
BAAT                  0.322   bile acid Coenzyme A: amino acid N-acyltransferase ...
BAAT                  0.322   bile acid Coenzyme A: amino acid N-acyltransferase [H...
ACOT6                 0.249   acyl-CoA thioesterase 6 
LOC100131818          0.008   PREDICTED: hypothetical protein 
LOC100131818          0.008   PREDICTED: hypothetical protein 
FARP2                 0.007   FERM, RhoGEF and pleckstrin domain protein 2 
TIAM1                 0.007   T-cell lymphoma invasion and metastasis 1 
ESF1                  0.007   ABT1-associated protein 
FAM47A                0.005   hypothetical protein LOC158724 
GPT2                  0.005   glutamic pyruvate transaminase 2 isoform 2 
GPT2                  0.005   glutamic pyruvate transaminase 2 isoform 1 
LOC100133770          0.005   PREDICTED: similar to vacuolar protein sorting 35 [...
SHKBP1                0.004   SH3KBP1 binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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