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Search of human proteins with 187607308
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187607308 paraneoplastic antigen like 6A [Homo sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo ... 791 0.0
gi|187607308 paraneoplastic antigen like 6A [Homo sapiens] 791 0.0
gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo ... 783 0.0
gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo ... 783 0.0
gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo sa... 299 3e-81
gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [H... 285 4e-77
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H... 285 4e-77
gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [H... 285 4e-77
gi|156766066 paraneoplastic antigen like 5 [Homo sapiens] 277 1e-74
gi|156766064 paraneoplastic antigen like 5 [Homo sapiens] 277 1e-74
gi|24308384 paraneoplastic antigen like 5 [Homo sapiens] 277 1e-74
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens] 273 3e-73
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens] 273 3e-73
gi|52486265 paraneoplastic antigen MA1 [Homo sapiens] 263 3e-70
gi|11464969 paraneoplastic antigen MA2 [Homo sapiens] 262 5e-70
gi|19923584 modulator of apoptosis 1 [Homo sapiens] 251 8e-67
gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens] 137 2e-32
gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens] 136 4e-32
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H... 122 4e-28
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig... 122 4e-28
gi|156766054 PNMA-like 1 isoform b [Homo sapiens] 110 2e-24
gi|39780597 PNMA-like 1 isoform a [Homo sapiens] 110 2e-24
gi|146219841 PNMA-like 2 [Homo sapiens] 87 3e-17
gi|199559779 coiled-coil domain containing 8 [Homo sapiens] 43 6e-04
gi|4507373 beta-tubulin cofactor C [Homo sapiens] 40 0.004
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 36 0.054
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 36 0.054
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 36 0.054
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 35 0.092
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 35 0.092
>gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo
sapiens]
Length = 399
Score = 791 bits (2042), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
Query: 361 EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN 399
EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN
Sbjct: 361 EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN 399
>gi|187607308 paraneoplastic antigen like 6A [Homo sapiens]
Length = 399
Score = 791 bits (2042), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
Query: 361 EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN 399
EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN
Sbjct: 361 EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN 399
>gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo
sapiens]
Length = 399
Score = 783 bits (2022), Expect = 0.0
Identities = 396/399 (99%), Positives = 396/399 (99%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGK FREED
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
SVAGALGVGLRRVCWLRSIGQAVQPWVEAVR QSLGVFSGRDQPAPGEESFEVWLDHTTE
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
Query: 361 EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN 399
EAVPGGPGREPEGL QAGGQEAEELLQEGLKPVLEECDN
Sbjct: 361 EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN 399
>gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo
sapiens]
Length = 399
Score = 783 bits (2022), Expect = 0.0
Identities = 396/399 (99%), Positives = 396/399 (99%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGK FREED
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
SVAGALGVGLRRVCWLRSIGQAVQPWVEAVR QSLGVFSGRDQPAPGEESFEVWLDHTTE
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
Query: 361 EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN 399
EAVPGGPGREPEGL QAGGQEAEELLQEGLKPVLEECDN
Sbjct: 361 EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN 399
>gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo
sapiens]
Length = 463
Score = 299 bits (765), Expect = 3e-81
Identities = 158/343 (46%), Positives = 227/343 (66%), Gaps = 14/343 (4%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
M +T+LQDWCR +N RR +LILGIPEDC + EF+E+L+ A R +G + V+G++FR E+
Sbjct: 1 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMFRREE 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NA A L+EL ++++YAL+PREIPG GGPW V+ PR S EF L R+ F E+E + V
Sbjct: 61 NAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEF--LNRLNRFLEEERRTVS 118
Query: 121 SVAGALG-----------VGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEE 169
+ LG + W +++G AVQP +E + Y+ L VFSG PG
Sbjct: 119 DMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPGAL 178
Query: 170 SFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALA 229
+F+ WL+HTTEML +WQ V E E+RRRL+E LRG ALQ+V L A N + T ++CLAAL
Sbjct: 179 AFDAWLEHTTEMLQMWQ-VPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAALQ 237
Query: 230 QVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQM 289
QVFG ES +VK A Q++GE++S+FVLRLE LLQ+A+E ++R + ++ RL+++
Sbjct: 238 QVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKRV 297
Query: 290 LTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASL 332
L+ A L + L + L+ ++ + P FL ++ L+RE E WEA+L
Sbjct: 298 LSGATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATL 340
>gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 285 bits (730), Expect = 4e-77
Identities = 166/371 (44%), Positives = 219/371 (59%), Gaps = 46/371 (12%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
+A+ MLQDWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL KVFR+E
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
A AALVE +N +L+PR+I G GGPW V+ +P
Sbjct: 251 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLP------------------------- 285
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Q ++P V+ + Y+ L FSGR+QP EESFE WL+ +
Sbjct: 286 --------------------QTLRPLVKTMAYRELRPFSGREQPGCVEESFESWLEDAKD 325
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
ML +W SERERRRRLL+ L G AL +V LL E+P +AQDCL AL QVF ++ T
Sbjct: 326 MLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFRSRDTWMT 385
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
R+K LT Q E L AFV+RLE LLQKA+EK A+ A A+ +RLRQ+L+RA +E L
Sbjct: 386 SRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRARPSEALQ 445
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
+ LR++++ R P FL +L L+R+ EAW ASLARS + A + A A+AS +
Sbjct: 446 DTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAPVESEDPAAAQASPAQ 505
Query: 360 VEAVPGGPGRE 370
+A PG E
Sbjct: 506 GDASEADPGAE 516
>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 541
Score = 285 bits (730), Expect = 4e-77
Identities = 166/371 (44%), Positives = 219/371 (59%), Gaps = 46/371 (12%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
+A+ MLQDWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL KVFR+E
Sbjct: 131 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 190
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
A AALVE +N +L+PR+I G GGPW V+ +P
Sbjct: 191 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLP------------------------- 225
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Q ++P V+ + Y+ L FSGR+QP EESFE WL+ +
Sbjct: 226 --------------------QTLRPLVKTMAYRELRPFSGREQPGCVEESFESWLEDAKD 265
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
ML +W SERERRRRLL+ L G AL +V LL E+P +AQDCL AL QVF ++ T
Sbjct: 266 MLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFRSRDTWMT 325
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
R+K LT Q E L AFV+RLE LLQKA+EK A+ A A+ +RLRQ+L+RA +E L
Sbjct: 326 SRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRARPSEALQ 385
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
+ LR++++ R P FL +L L+R+ EAW ASLARS + A + A A+AS +
Sbjct: 386 DTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAPVESEDPAAAQASPAQ 445
Query: 360 VEAVPGGPGRE 370
+A PG E
Sbjct: 446 GDASEADPGAE 456
>gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 285 bits (730), Expect = 4e-77
Identities = 166/371 (44%), Positives = 219/371 (59%), Gaps = 46/371 (12%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
+A+ MLQDWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL KVFR+E
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
A AALVE +N +L+PR+I G GGPW V+ +P
Sbjct: 251 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLP------------------------- 285
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Q ++P V+ + Y+ L FSGR+QP EESFE WL+ +
Sbjct: 286 --------------------QTLRPLVKTMAYRELRPFSGREQPGCVEESFESWLEDAKD 325
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
ML +W SERERRRRLL+ L G AL +V LL E+P +AQDCL AL QVF ++ T
Sbjct: 326 MLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFRSRDTWMT 385
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
R+K LT Q E L AFV+RLE LLQKA+EK A+ A A+ +RLRQ+L+RA +E L
Sbjct: 386 SRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRARPSEALQ 445
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
+ LR++++ R P FL +L L+R+ EAW ASLARS + A + A A+AS +
Sbjct: 446 DTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAPVESEDPAAAQASPAQ 505
Query: 360 VEAVPGGPGRE 370
+A PG E
Sbjct: 506 GDASEADPGAE 516
>gi|156766066 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 277 bits (708), Expect = 1e-74
Identities = 166/409 (40%), Positives = 235/409 (57%), Gaps = 32/409 (7%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+T+L+DWC+ M ++ R+ LLI+GIP +C + E Q++++A L+P+ + VLG++FR ED
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NA A +EL VNY +P IPG GG W VV PR +EFL R+ +F + EG+ +
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLS--RLNYFLKDEGRSMT 118
Query: 121 SVAGALGVGLRRVCWL--RSIGQAVQPWV---------EAVRYQSLGVFSGRDQPAPGEE 169
VA ALG C L S+ V P V E++ Y+ L VFSG P+PGEE
Sbjct: 119 DVARALGC-----CSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEE 173
Query: 170 SFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALA 229
+FE WL+ TE++ +WQ VSE E+RRRLLE LRG AL ++ L A N + T + CL AL
Sbjct: 174 TFEDWLEQVTEIMPIWQ-VSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALK 232
Query: 230 QVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQM 289
Q+FGD E + + L + GE++S F+LRLE LLQKA+ K L+ S D +RL+ +
Sbjct: 233 QIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHL 292
Query: 290 LTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARA- 348
L R +T L L L G P+FLE++ L+R+ E WE + A + G G A
Sbjct: 293 LARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGAS 352
Query: 349 GAQAVARASTKVEAVPGGPGREPEGLRQAG--GQEAEELLQEGLKPVLE 395
G QA A AS P+ QA + + +Q GL P+++
Sbjct: 353 GRQARAEASVSA----------PQATVQARSFSDSSPQTIQGGLPPLVK 391
>gi|156766064 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 277 bits (708), Expect = 1e-74
Identities = 166/409 (40%), Positives = 235/409 (57%), Gaps = 32/409 (7%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+T+L+DWC+ M ++ R+ LLI+GIP +C + E Q++++A L+P+ + VLG++FR ED
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NA A +EL VNY +P IPG GG W VV PR +EFL R+ +F + EG+ +
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLS--RLNYFLKDEGRSMT 118
Query: 121 SVAGALGVGLRRVCWL--RSIGQAVQPWV---------EAVRYQSLGVFSGRDQPAPGEE 169
VA ALG C L S+ V P V E++ Y+ L VFSG P+PGEE
Sbjct: 119 DVARALGC-----CSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEE 173
Query: 170 SFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALA 229
+FE WL+ TE++ +WQ VSE E+RRRLLE LRG AL ++ L A N + T + CL AL
Sbjct: 174 TFEDWLEQVTEIMPIWQ-VSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALK 232
Query: 230 QVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQM 289
Q+FGD E + + L + GE++S F+LRLE LLQKA+ K L+ S D +RL+ +
Sbjct: 233 QIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHL 292
Query: 290 LTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARA- 348
L R +T L L L G P+FLE++ L+R+ E WE + A + G G A
Sbjct: 293 LARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGAS 352
Query: 349 GAQAVARASTKVEAVPGGPGREPEGLRQAG--GQEAEELLQEGLKPVLE 395
G QA A AS P+ QA + + +Q GL P+++
Sbjct: 353 GRQARAEASVSA----------PQATVQARSFSDSSPQTIQGGLPPLVK 391
>gi|24308384 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 277 bits (708), Expect = 1e-74
Identities = 166/409 (40%), Positives = 235/409 (57%), Gaps = 32/409 (7%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+T+L+DWC+ M ++ R+ LLI+GIP +C + E Q++++A L+P+ + VLG++FR ED
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NA A +EL VNY +P IPG GG W VV PR +EFL R+ +F + EG+ +
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLS--RLNYFLKDEGRSMT 118
Query: 121 SVAGALGVGLRRVCWL--RSIGQAVQPWV---------EAVRYQSLGVFSGRDQPAPGEE 169
VA ALG C L S+ V P V E++ Y+ L VFSG P+PGEE
Sbjct: 119 DVARALGC-----CSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEE 173
Query: 170 SFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALA 229
+FE WL+ TE++ +WQ VSE E+RRRLLE LRG AL ++ L A N + T + CL AL
Sbjct: 174 TFEDWLEQVTEIMPIWQ-VSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALK 232
Query: 230 QVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQM 289
Q+FGD E + + L + GE++S F+LRLE LLQKA+ K L+ S D +RL+ +
Sbjct: 233 QIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHL 292
Query: 290 LTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARA- 348
L R +T L L L G P+FLE++ L+R+ E WE + A + G G A
Sbjct: 293 LARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGAS 352
Query: 349 GAQAVARASTKVEAVPGGPGREPEGLRQAG--GQEAEELLQEGLKPVLE 395
G QA A AS P+ QA + + +Q GL P+++
Sbjct: 353 GRQARAEASVSA----------PQATVQARSFSDSSPQTIQGGLPPLVK 391
>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 273 bits (697), Expect = 3e-73
Identities = 162/383 (42%), Positives = 217/383 (56%), Gaps = 49/383 (12%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+ ML+DWCRWMG NA R LLILGIP+DC + EFQE++ AAL P+G + VL K FR+E
Sbjct: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
A AALVE +N +L+P +IPG GGPW V+F+P
Sbjct: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
QP +E Y+ L FS R+QP EESFE W++H +
Sbjct: 96 -----------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKD 132
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
ML +W SERE++R LLE L G AL++V LL E+ +A DCLAAL QVF + +++ T
Sbjct: 133 MLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMT 192
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
R+K LT Q E L AFV+RLE LLQ+A+EK A+ A A+ +RL+Q+L+ A +E L
Sbjct: 193 SRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQ 252
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
+ LR +++ R P FL +L L+RE EAW A ARS + A + A A+AS +
Sbjct: 253 DTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQ 312
Query: 360 VEAVPGGPGREPEGLRQAGGQEA 382
A GPG E + +EA
Sbjct: 313 GNASEAGPGAEDAAEAASATKEA 335
>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 273 bits (697), Expect = 3e-73
Identities = 162/383 (42%), Positives = 217/383 (56%), Gaps = 49/383 (12%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+ ML+DWCRWMG NA R LLILGIP+DC + EFQE++ AAL P+G + VL K FR+E
Sbjct: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
A AALVE +N +L+P +IPG GGPW V+F+P
Sbjct: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
QP +E Y+ L FS R+QP EESFE W++H +
Sbjct: 96 -----------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKD 132
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
ML +W SERE++R LLE L G AL++V LL E+ +A DCLAAL QVF + +++ T
Sbjct: 133 MLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMT 192
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
R+K LT Q E L AFV+RLE LLQ+A+EK A+ A A+ +RL+Q+L+ A +E L
Sbjct: 193 SRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQ 252
Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
+ LR +++ R P FL +L L+RE EAW A ARS + A + A A+AS +
Sbjct: 253 DTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQ 312
Query: 360 VEAVPGGPGREPEGLRQAGGQEA 382
A GPG E + +EA
Sbjct: 313 GNASEAGPGAEDAAEAASATKEA 335
>gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]
Length = 353
Score = 263 bits (671), Expect = 3e-70
Identities = 149/339 (43%), Positives = 214/339 (63%), Gaps = 14/339 (4%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+T+L+DWCR M VN++R LL+ GIP +CD+AE +E+L+AA+ P + +LG++F E+
Sbjct: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NA AAL+EL V+YA +PRE+PG GG W V+F P S EFL R+ F +EG V+
Sbjct: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLE--RLHLFLAREGWTVQ 117
Query: 121 SVAGALGV-------GLRRVCWLRS--IGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESF 171
VA LG G + + + +QP VE++ Y+ L +FSGRD P PGEE+F
Sbjct: 118 DVARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETF 177
Query: 172 EVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQV 231
+ WL+HT E+L WQ VS+ E+RRRL+E LRG A ++ L + NPA T +CL AL QV
Sbjct: 178 DPWLEHTNEVLEEWQ-VSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQV 236
Query: 232 FGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLT 291
FG ES ++K L Q GE+LSA+V+RLE LLQK +EK A+ + + ++ RL Q++
Sbjct: 237 FGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIA 296
Query: 292 RAHLTEPLDEALRKLRMA-GRSPSFLEMLGLVRESEAWE 329
A+ + + L G +P+ ++L +RE EA E
Sbjct: 297 GANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKE 335
>gi|11464969 paraneoplastic antigen MA2 [Homo sapiens]
Length = 364
Score = 262 bits (669), Expect = 5e-70
Identities = 149/358 (41%), Positives = 222/358 (62%), Gaps = 17/358 (4%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+ +L+DWCR M V+ ++ L++ GIP D ++AE QE L+ L+ +G + +LGK+FR+++
Sbjct: 1 MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIFRKQE 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
NA A L+EL + + + +P E+ G GG W V+F EFL R+ F E+EGQ V
Sbjct: 61 NANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLE--RLNLFLEKEGQTVS 118
Query: 121 SVAGALG-----------VGLRRVCWL--RSIGQAVQPWVEAVRYQSLGVFSGRDQPAPG 167
+ ALG + + L +++ A QP + +RY+ L VFSG PAP
Sbjct: 119 GMFRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLP-MRYRKLRVFSGSAVPAPE 177
Query: 168 EESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAA 227
EESFEVWL+ TE++ W V+E E++R L E LRG AL L+H + A+NP+ + ++CL A
Sbjct: 178 EESFEVWLEQATEIVKEWP-VTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEA 236
Query: 228 LAQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLR 287
QVFG ES+ T +V+ L Q+ GE++SA+VLRLE LL++A+EK A+ R AD+VRL
Sbjct: 237 FKQVFGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLLRRAVEKRAIPRRIADQVRLE 296
Query: 288 QMLTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAG 345
Q++ A L + L LR+L+ G PSFLE++ ++RE E EAS + +E G
Sbjct: 297 QVMAGATLNQMLWCRLRELKDQGPPPSFLELMKVIREEEEEEASFENESIEEPEERDG 354
>gi|19923584 modulator of apoptosis 1 [Homo sapiens]
Length = 351
Score = 251 bits (641), Expect = 8e-67
Identities = 142/344 (41%), Positives = 209/344 (60%), Gaps = 23/344 (6%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
M + +L+DWCR M +N R+ LLI GI + C AE +E+L+A L P+G + +LG++FR ++
Sbjct: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
N ALV L E ++ALVP+EIPG GG W V+F P F L R+ F EG V
Sbjct: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTF--LSRLNEFLAGEGMTVG 118
Query: 121 SVAGALG---------VGLRRVCWLRSIGQ---AVQPWVEAVRYQSLGVFSGRDQPAPGE 168
++ ALG G+ W + Q A+QP ++ ++Y+ L VFSGR+ P PGE
Sbjct: 119 ELSRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGE 178
Query: 169 ESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAAL 228
E F W+ HTT+M+ WQ V + E+RRRLLE LRG AL ++ L NP T +CL AL
Sbjct: 179 EEFGRWMFHTTQMIKAWQ-VPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237
Query: 229 AQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQ 288
+VFG ++ ++VK LT Q+ E+LSA+VLRLE LLQK +++ A+ R + ++ RL Q
Sbjct: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297
Query: 289 MLTRAHLTEPLDEALRK---LRMAGRSPSFLEMLGLVRESEAWE 329
++ A + + +R+ L G +P FL++L L+++ EA E
Sbjct: 298 VIAGA-----VHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAE 336
>gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens]
Length = 403
Score = 137 bits (345), Expect = 2e-32
Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 13/234 (5%)
Query: 136 LRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTEMLHVWQGVSERERRR 195
LRS+G+++ P V + +++ +FSGR PA G+E+FE WL E+L W +SE E+ +
Sbjct: 26 LRSLGRSLCPLVVKMAERNMKLFSGRVVPAQGKETFENWLIQVNEVLPDWS-MSEEEKLK 84
Query: 196 RLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQATIRVKCLTAQQQSGER 255
RL++ LRG A +++ L A NP + D L A+ VFG++ES T K Q GE+
Sbjct: 85 RLMKTLRGPAREVMRLLQAANPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQAQGEK 144
Query: 256 LSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLDEALRK-LRMAG---- 310
S +V+RLEV LQ A++ LA A++ RL+Q+L A L L L+ LRM
Sbjct: 145 ASLYVIRLEVQLQNAIQAGILAEKDANQTRLQQLLLGAELNRDLRFRLKHLLRMYANKQE 204
Query: 311 RSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARA-------GAQAVARAS 357
R P+FLE++ ++RE E W+ + + R + E RA GAQ +A +S
Sbjct: 205 RLPNFLELIKMIREEEDWDDAFIKRKRPKRSEPIMERAASPVAFQGAQPIAISS 258
>gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens]
Length = 402
Score = 136 bits (342), Expect = 4e-32
Identities = 83/230 (36%), Positives = 130/230 (56%), Gaps = 6/230 (2%)
Query: 136 LRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTEMLHVWQGVSERERRR 195
LRS+G+++ P + ++ +++ +FSGR PA GEE+FE WL +L W +SE E+ +
Sbjct: 26 LRSLGRSLGPIMASMADRNMKLFSGRVVPAQGEETFENWLTQVNGVLPDWN-MSEEEKLK 84
Query: 196 RLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQATIRVKCLTAQQQSGER 255
RL++ LRG A +++ L A NP + D L A+ VFG++ES T K Q GE+
Sbjct: 85 RLMKTLRGPAREVMRVLQATNPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQAQGEK 144
Query: 256 LSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLDEALRK-LRMAG---- 310
S +V+RLEV LQ A++ +A A+R RL+Q+L L+ L L+ LRM
Sbjct: 145 ASLYVIRLEVQLQNAIQAGIIAEKDANRTRLQQLLLGGELSRDLRLRLKDFLRMYANEQE 204
Query: 311 RSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
R P+FLE++ +VRE E W+ + + R + E RA + + S +
Sbjct: 205 RLPNFLELIRMVREEEDWDDAFIKRKRPKRSESMVERAVSPVAFQGSPPI 254
>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
sapiens]
Length = 340
Score = 122 bits (307), Expect = 4e-28
Identities = 58/102 (56%), Positives = 75/102 (73%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+ ML+DWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL KVFR+E
Sbjct: 1 MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEF 102
A AALVE +N +L+PR+I G GGPW V+ +P+ EF
Sbjct: 61 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQALDAEF 102
Score = 96.7 bits (239), Expect = 3e-20
Identities = 57/134 (42%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
+V A G + R W++ +Q +E YQ L FSGR+QP EESFE W++H +
Sbjct: 208 AVGEARGTNVTRA-WVQPRRCTLQAVLENRAYQELRPFSGREQPGCEEESFESWMEHAKD 266
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDC-------LAALAQVFG 233
ML +W SERER+R LLE L G AL +V LL E+P A DC A L Q FG
Sbjct: 267 MLQLWYHASERERKRWLLESLGGPALDVVSGLLEEDPNLAALDCQVLLDCWAAVLGQAFG 326
Query: 234 DNESQATIRVKCLT 247
+ + + T R+K LT
Sbjct: 327 NRDPRMTSRLKFLT 340
>gi|169216749 PREDICTED: similar to Putative paraneoplastic
antigen-like protein 6B-like protein [Homo sapiens]
Length = 340
Score = 122 bits (307), Expect = 4e-28
Identities = 58/102 (56%), Positives = 75/102 (73%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+ ML+DWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL KVFR+E
Sbjct: 1 MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEF 102
A AALVE +N +L+PR+I G GGPW V+ +P+ EF
Sbjct: 61 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQALDAEF 102
Score = 96.7 bits (239), Expect = 3e-20
Identities = 57/134 (42%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
+V A G + R W++ +Q +E YQ L FSGR+QP EESFE W++H +
Sbjct: 208 AVGEARGTNVTRA-WVQPRRCTLQAVLENRAYQELRPFSGREQPGCKEESFESWMEHAKD 266
Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDC-------LAALAQVFG 233
ML +W SERER+R LLE L G AL +V LL E+P A DC A L Q FG
Sbjct: 267 MLQLWYHASERERKRWLLESLGGPALDVVSGLLEEDPNLAALDCQVLLDCWAAVLGQAFG 326
Query: 234 DNESQATIRVKCLT 247
+ + + T R+K LT
Sbjct: 327 NRDPRMTSRLKFLT 340
>gi|156766054 PNMA-like 1 isoform b [Homo sapiens]
Length = 378
Score = 110 bits (275), Expect = 2e-24
Identities = 65/160 (40%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+ +L+DWCR M V+ R LL+ GIPEDC AE +E+L L P+G + VL K+F E+
Sbjct: 5 MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
N AAL+E+ VN + +PRE PG GG W VV EF L + F + EG+ E
Sbjct: 65 NVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEF--LKNLNEFLDAEGRTWE 122
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSG 160
V L L ++ Q + W EA LGV G
Sbjct: 123 DVVRLL--QLNHPTLSQNQHQPPENWAEA-----LGVLLG 155
>gi|39780597 PNMA-like 1 isoform a [Homo sapiens]
Length = 439
Score = 110 bits (275), Expect = 2e-24
Identities = 65/160 (40%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+ +L+DWCR M V+ R LL+ GIPEDC AE +E+L L P+G + VL K+F E+
Sbjct: 5 MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
N AAL+E+ VN + +PRE PG GG W VV EF L + F + EG+ E
Sbjct: 65 NVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEF--LKNLNEFLDAEGRTWE 122
Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSG 160
V L L ++ Q + W EA LGV G
Sbjct: 123 DVVRLL--QLNHPTLSQNQHQPPENWAEA-----LGVLLG 155
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 86.7 bits (213), Expect = 3e-17
Identities = 43/103 (41%), Positives = 61/103 (59%)
Query: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
MA+++LQDWCR + V+A R LL+ GIPE + A+ + L+ L P+G F + +
Sbjct: 1 MAMSLLQDWCRSLDVDAHRALLVTGIPEGLEQADVEAVLQPTLLPLGTFRLRHMKALMNE 60
Query: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFL 103
A AALVE +VN+A +PREIPG G W V++ R L
Sbjct: 61 KAQAALVEFVEDVNHAAIPREIPGKDGVWRVLWKDRAQDTRVL 103
>gi|199559779 coiled-coil domain containing 8 [Homo sapiens]
Length = 538
Score = 42.7 bits (99), Expect = 6e-04
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 66 LVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVESVA 123
++++ +V+Y L+PRE+ GG W V+ P EF R+ F E+EG+ +E VA
Sbjct: 1 MLQIGEDVDYLLIPREVRLAGGVWRVISKPATKEAEF--RERLTQFLEEEGRTLEDVA 56
>gi|4507373 beta-tubulin cofactor C [Homo sapiens]
Length = 346
Score = 40.0 bits (92), Expect = 0.004
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 224 CLAALAQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEA----LARA 279
C AA + GD ESQ + + Q++ ER R + + +EKE +A
Sbjct: 6 CSAAAVRT-GDMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATF 64
Query: 280 SADRVRLRQMLTRAHLTEPLDEALRKL----RMAGRSPSFLEMLGLVRESEAW---EASL 332
+ +R + ++L RA E L+EA +L ++ S FL L + EA +A+L
Sbjct: 65 ARERAAVEELLERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALARLQAAL 124
Query: 333 ARSVRAQTQEGAGARAGAQAVARASTKVEAVPGGP 367
A R + A A +STKV+A PG P
Sbjct: 125 AERRRGLQPKKRFAFKTRGKDAASSTKVDAAPGIP 159
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 36.2 bits (82), Expect = 0.054
Identities = 68/254 (26%), Positives = 101/254 (39%), Gaps = 55/254 (21%)
Query: 190 ERERRRRLLEGLRGTALQLVHALLA----ENPAR-----TAQDCLAALAQVFGDNESQAT 240
E+++R L G + + A LA E AR + ++ AALA+ D ES+
Sbjct: 1098 EQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERV 1157
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKA-MEKEALARASADRVRLRQML---TRAHLT 296
R K ++ GE L A LE L ++E ++ + L++ L TR H
Sbjct: 1158 ARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKTLEEETRIHEA 1217
Query: 297 ----------EPLDEALRKLRMAGRSPSFLEMLGLVRESEAWE--ASLA----------- 333
+ L E +L A R E L E+E E A L+
Sbjct: 1218 AVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQ 1277
Query: 334 --RSVRAQTQE-----GAGARAGAQA---VARASTKVEAVPGGPGR-EPEGLR------- 375
R + Q QE G G RA A+A + RA ++E V G E + +R
Sbjct: 1278 RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEAESKTIRLSKELSS 1337
Query: 376 -QAGGQEAEELLQE 388
+A +A+ELLQE
Sbjct: 1338 TEAQLHDAQELLQE 1351
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 36.2 bits (82), Expect = 0.054
Identities = 68/254 (26%), Positives = 101/254 (39%), Gaps = 55/254 (21%)
Query: 190 ERERRRRLLEGLRGTALQLVHALLA----ENPAR-----TAQDCLAALAQVFGDNESQAT 240
E+++R L G + + A LA E AR + ++ AALA+ D ES+
Sbjct: 1090 EQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERV 1149
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKA-MEKEALARASADRVRLRQML---TRAHLT 296
R K ++ GE L A LE L ++E ++ + L++ L TR H
Sbjct: 1150 ARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKTLEEETRIHEA 1209
Query: 297 ----------EPLDEALRKLRMAGRSPSFLEMLGLVRESEAWE--ASLA----------- 333
+ L E +L A R E L E+E E A L+
Sbjct: 1210 AVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQ 1269
Query: 334 --RSVRAQTQE-----GAGARAGAQA---VARASTKVEAVPGGPGR-EPEGLR------- 375
R + Q QE G G RA A+A + RA ++E V G E + +R
Sbjct: 1270 RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEAESKTIRLSKELSS 1329
Query: 376 -QAGGQEAEELLQE 388
+A +A+ELLQE
Sbjct: 1330 TEAQLHDAQELLQE 1343
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 36.2 bits (82), Expect = 0.054
Identities = 68/254 (26%), Positives = 101/254 (39%), Gaps = 55/254 (21%)
Query: 190 ERERRRRLLEGLRGTALQLVHALLA----ENPAR-----TAQDCLAALAQVFGDNESQAT 240
E+++R L G + + A LA E AR + ++ AALA+ D ES+
Sbjct: 1131 EQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERV 1190
Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKA-MEKEALARASADRVRLRQML---TRAHLT 296
R K ++ GE L A LE L ++E ++ + L++ L TR H
Sbjct: 1191 ARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKTLEEETRIHEA 1250
Query: 297 ----------EPLDEALRKLRMAGRSPSFLEMLGLVRESEAWE--ASLA----------- 333
+ L E +L A R E L E+E E A L+
Sbjct: 1251 AVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQ 1310
Query: 334 --RSVRAQTQE-----GAGARAGAQA---VARASTKVEAVPGGPGR-EPEGLR------- 375
R + Q QE G G RA A+A + RA ++E V G E + +R
Sbjct: 1311 RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEAESKTIRLSKELSS 1370
Query: 376 -QAGGQEAEELLQE 388
+A +A+ELLQE
Sbjct: 1371 TEAQLHDAQELLQE 1384
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 35.4 bits (80), Expect = 0.092
Identities = 32/95 (33%), Positives = 38/95 (40%), Gaps = 17/95 (17%)
Query: 303 LRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKVEA 362
LR L + GR+P GL A L R Q +EGA A A A+ + S
Sbjct: 548 LRSLSLRGRAPG----RGLFHV-----ALLMRQEAGQLREGAVAAAAAERLPAGSPVAVL 598
Query: 363 VPGGPGREPEGL--------RQAGGQEAEELLQEG 389
V G P PEGL R+ GG L Q G
Sbjct: 599 VAGEPSHRPEGLAAGQTGKARRGGGGGRRGLRQRG 633
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 35.4 bits (80), Expect = 0.092
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 254 ERLSAFVLRLEVL-LQKAMEKEALARASADRVRLRQMLTRAHLTE-PLDEALRKLRMAGR 311
E LS L+ ++L +KA EAL +A A RV L +T+ E L ++L KL
Sbjct: 687 EALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNE 746
Query: 312 S--PSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKVEAVPGGPGR 369
S L++ LV + E +++L R QE AR + + + E G
Sbjct: 747 SLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQG--- 803
Query: 370 EPEG-LRQAGGQEAEELLQEGLKPVLEE 396
EG LR A ++A+E L++ L + E
Sbjct: 804 -LEGSLRVA--EQAQEALEQQLPTLRHE 828
Score = 29.6 bits (65), Expect = 5.0
Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 13/183 (7%)
Query: 189 SERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQATIRVKCLTA 248
SE R R L L+G +L AE +R ++ L ++ S +R + A
Sbjct: 1294 SENTRLGRELAELQG---RLALGERAEKESR--RETLGLRQRLLKGEASLEVMRQELQVA 1348
Query: 249 QQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLDEALRKLRM 308
Q++ E+ F R LL E + D R ++ A E + LR
Sbjct: 1349 QRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAA 1408
Query: 309 AGRSPSFLEMLGLVR-ESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKVEAVPGGP 367
GR+ L V + A EA L +R+ + G G R VPG P
Sbjct: 1409 EGRAQGLEAELARVEVQRRAAEAQLG-GLRSALRRGLGLGRAPSPAPR------PVPGSP 1461
Query: 368 GRE 370
R+
Sbjct: 1462 ARD 1464
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,012,485
Number of Sequences: 37866
Number of extensions: 668825
Number of successful extensions: 2464
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 2356
Number of HSP's gapped (non-prelim): 155
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.