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Search of human proteins with 106507239
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|106507239 EGFR-coamplified and overexpressed protein [Homo
sapiens]
(172 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|106507239 EGFR-coamplified and overexpressed protein [Homo sa... 384 e-107
gi|169162161 PREDICTED: similar to EGFR-coamplified and overexpr... 381 e-106
gi|113411383 PREDICTED: similar to EGFR-coamplified and overexpr... 381 e-106
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 46 2e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 46 2e-05
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 46 2e-05
gi|153792074 proline rich 12 [Homo sapiens] 44 9e-05
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 43 2e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 42 3e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 41 4e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 41 4e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 41 4e-04
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 41 4e-04
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 41 4e-04
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 41 4e-04
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 41 4e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 41 4e-04
gi|160707881 formin 2 [Homo sapiens] 41 6e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 40 8e-04
gi|7706501 WW domain binding protein 11 [Homo sapiens] 40 8e-04
gi|55750053 atrophin-1 [Homo sapiens] 40 0.001
gi|55750041 atrophin-1 [Homo sapiens] 40 0.001
gi|39812378 RAN binding protein 9 [Homo sapiens] 39 0.002
gi|157168329 formin 1 [Homo sapiens] 39 0.002
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.002
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.002
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.002
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 39 0.002
gi|55741677 SET domain containing 1A [Homo sapiens] 39 0.002
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 39 0.002
>gi|106507239 EGFR-coamplified and overexpressed protein [Homo
sapiens]
Length = 172
Score = 384 bits (987), Expect = e-107
Identities = 172/172 (100%), Positives = 172/172 (100%)
Query: 1 MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRL 60
MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRL
Sbjct: 1 MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRL 60
Query: 61 WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT 120
WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT
Sbjct: 61 WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT 120
Query: 121 DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK 172
DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK
Sbjct: 121 DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK 172
>gi|169162161 PREDICTED: similar to EGFR-coamplified and
overexpressed protein [Homo sapiens]
Length = 172
Score = 381 bits (979), Expect = e-106
Identities = 171/172 (99%), Positives = 171/172 (99%)
Query: 1 MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRL 60
MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQ L
Sbjct: 1 MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQWL 60
Query: 61 WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT 120
WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT
Sbjct: 61 WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT 120
Query: 121 DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK 172
DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK
Sbjct: 121 DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK 172
>gi|113411383 PREDICTED: similar to EGFR-coamplified and
overexpressed protein [Homo sapiens]
Length = 172
Score = 381 bits (979), Expect = e-106
Identities = 171/172 (99%), Positives = 171/172 (99%)
Query: 1 MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRL 60
MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQ L
Sbjct: 1 MRRQPAKVAALLLGLLLECTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQWL 60
Query: 61 WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT 120
WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT
Sbjct: 61 WYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYT 120
Query: 121 DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK 172
DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK
Sbjct: 121 DPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK 172
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 45.8 bits (107), Expect = 2e-05
Identities = 30/79 (37%), Positives = 32/79 (40%), Gaps = 16/79 (20%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P PP PG P PP PGGPG+ P PP P
Sbjct: 682 PPPL---PGSAGIPPPPPPLPGEAGMPPPPPPL--PGGPGIPP-----------PPPFPG 725
Query: 147 GSVACPPPPAYCNTPPPPY 165
G PPPP PPPP+
Sbjct: 726 GPGIPPPPPGMGMPPPPPF 744
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPP--AYCNTP 161
PP P PG PP P P P G + PP+ P G+ PPPP P
Sbjct: 588 PPPPAPGDSTTPPPPPPPPPPPPPLPGG----VCISSPPSLPGGTAISPPPPLSGDATIP 643
Query: 162 PPP 164
PPP
Sbjct: 644 PPP 646
Score = 37.7 bits (86), Expect = 0.005
Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 87 PPPL-----IEEPAFNVSYTRQPPNPG-PGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQV 140
PPPL I P+ T PP P PG+ + PP PG G+ P + +
Sbjct: 645 PPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGM 704
Query: 141 PPNSP--QGSVACPPPPAYCNTP--PPP 164
PP P G PPPP + P PPP
Sbjct: 705 PPPPPPLPGGPGIPPPPPFPGGPGIPPP 732
Score = 29.3 bits (64), Expect = 1.8
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 11/58 (18%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P ++ P PP PG G +PP G PPPP PPPP
Sbjct: 565 PSVPSRAPVPPAPPLPGDSGTI-----------IPPPPAPGDSTTPPPPPPPPPPPPP 611
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 45.8 bits (107), Expect = 2e-05
Identities = 30/79 (37%), Positives = 32/79 (40%), Gaps = 16/79 (20%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P PP PG P PP PGGPG+ P PP P
Sbjct: 691 PPPL---PGSAGIPPPPPPLPGEAGMPPPPPPL--PGGPGIPP-----------PPPFPG 734
Query: 147 GSVACPPPPAYCNTPPPPY 165
G PPPP PPPP+
Sbjct: 735 GPGIPPPPPGMGMPPPPPF 753
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPP--AYCNTP 161
PP P PG PP P P P G + PP+ P G+ PPPP P
Sbjct: 597 PPPPAPGDSTTPPPPPPPPPPPPPLPGG----VCISSPPSLPGGTAISPPPPLSGDATIP 652
Query: 162 PPP 164
PPP
Sbjct: 653 PPP 655
Score = 37.7 bits (86), Expect = 0.005
Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 87 PPPL-----IEEPAFNVSYTRQPPNPG-PGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQV 140
PPPL I P+ T PP P PG+ + PP PG G+ P + +
Sbjct: 654 PPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGM 713
Query: 141 PPNSP--QGSVACPPPPAYCNTP--PPP 164
PP P G PPPP + P PPP
Sbjct: 714 PPPPPPLPGGPGIPPPPPFPGGPGIPPP 741
Score = 29.3 bits (64), Expect = 1.8
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 11/58 (18%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P ++ P PP PG G +PP G PPPP PPPP
Sbjct: 574 PSVPSRAPVPPAPPLPGDSGTI-----------IPPPPAPGDSTTPPPPPPPPPPPPP 620
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 45.8 bits (107), Expect = 2e-05
Identities = 26/64 (40%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 104 PPNPGPGAQQPGPPYY-TDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTP- 161
PP P PG PGPP P GP P G+ M +PP+ +G PP Y P
Sbjct: 334 PPRPPPGMPHPGPPPMGMPPRGP---PFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPR 390
Query: 162 PPPY 165
PPPY
Sbjct: 391 PPPY 394
Score = 29.3 bits (64), Expect = 1.8
Identities = 29/101 (28%), Positives = 35/101 (34%), Gaps = 22/101 (21%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPG-PGAQQPGP----PYYTDPGG---PGMN---------- 128
PP + P + PP+ G PGA PG P+ PGG PGM+
Sbjct: 258 PPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPH 317
Query: 129 ----PVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPY 165
P Q PP P G PPP PP+
Sbjct: 318 GLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPF 358
Score = 28.1 bits (61), Expect = 3.9
Identities = 30/106 (28%), Positives = 37/106 (34%), Gaps = 27/106 (25%)
Query: 86 YPPPLIEEPAF--NVSYTRQPPNPGPGAQQPGPPYYTDPGG--PG--------------M 127
+PPP+ A + PP PGA GPP PG PG
Sbjct: 243 FPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
Query: 128 NPVGNSMAMAFQVPPN------SPQGSVACP---PPPAYCNTPPPP 164
+P + M +A P P GS P PPP + PPP
Sbjct: 303 HPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPP 348
Score = 27.7 bits (60), Expect = 5.1
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 10/48 (20%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPG-----PPYYTDPGGPGMNP 129
PPP + P + PP P PGA PG PP PG G P
Sbjct: 233 PPPGMPPPG-----SFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGP 275
Score = 27.3 bits (59), Expect = 6.7
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 7/66 (10%)
Query: 106 NPGPGAQQPGPPYYTDPGGPGM-NPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTP--- 161
NP A +P + P P NPV +S+ P P GS P PP P
Sbjct: 199 NPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIP 258
Query: 162 ---PPP 164
PPP
Sbjct: 259 PAMPPP 264
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 43.5 bits (101), Expect = 9e-05
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 18/90 (20%)
Query: 87 PPPLIEEPAFNVSYTRQ------------PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSM 134
PPPL P+ N + T + PP P P Q P PP P P P
Sbjct: 1433 PPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPP----- 1487
Query: 135 AMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
+ P + P + PPPPA + PPPP
Sbjct: 1488 -LVAPTPSSPPPPPLPPPPPPAMPSPPPPP 1516
Score = 29.3 bits (64), Expect = 1.8
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 21/74 (28%)
Query: 105 PNPGPGAQQPGPPYYTDPG-GPGMNPVGNSMAMAFQVPPN-------SPQGSV------A 150
P PGP A P PY PG G P + + PP P G + A
Sbjct: 980 PPPGPPAYDPYGPYC--PGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQA 1037
Query: 151 CPPPPAYCNTPPPP 164
PPPP PPPP
Sbjct: 1038 APPPP-----PPPP 1046
Score = 28.9 bits (63), Expect = 2.3
Identities = 27/80 (33%), Positives = 30/80 (37%), Gaps = 25/80 (31%)
Query: 105 PNPGPGAQQPGPPYYTDPGGP-------GMNPVGNSMAMAFQVPPNSPQ-------GSV- 149
P G G PGPP Y DP GP G P + + PP P G +
Sbjct: 974 PKAGAGPP-PGPPAY-DPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQ 1031
Query: 150 -----ACPPPPAYCNTPPPP 164
A PPPP PPPP
Sbjct: 1032 SGPHQAAPPPPPP---PPPP 1048
Score = 27.3 bits (59), Expect = 6.7
Identities = 26/80 (32%), Positives = 27/80 (33%), Gaps = 16/80 (20%)
Query: 90 LIEEPAFNVSYTRQPPNP--GPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQG 147
L + P T P P P A PGPP PG P N G P P
Sbjct: 1405 LDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPL--PGLPSANSNGT---------PEPPLL 1453
Query: 148 SVACPPPPAYCNTP---PPP 164
PP P TP PPP
Sbjct: 1454 EEKPPPTPPPAPTPQPQPPP 1473
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 42.7 bits (99), Expect = 2e-04
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPP 163
PP P P P PP P G + N+++ Q PP +P PPPP PPP
Sbjct: 1959 PPPPPPPPLPPAPP---QPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPP 2015
Query: 164 P 164
P
Sbjct: 2016 P 2016
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 41.6 bits (96), Expect = 3e-04
Identities = 30/84 (35%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 81 IRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQV 140
+RR+ PPP PP P P P PP G P P A
Sbjct: 272 LRRQAPPPPPPSRGG------PPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPP 325
Query: 141 PPNSPQGSVACPPPPAYCNTPPPP 164
PP+ P SVA PPPP PPPP
Sbjct: 326 PPSRP--SVAVPPPPPNRMYPPPP 347
Score = 33.1 bits (74), Expect = 0.12
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 11/78 (14%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPP P+ V PP P P PP G P S+ V P P
Sbjct: 323 PPPPPSRPSVAV-----PPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPP- 376
Query: 147 GSVACPPPPAYCNTPPPP 164
PPPP PPPP
Sbjct: 377 -----PPPPPPPGPPPPP 389
Score = 32.3 bits (72), Expect = 0.21
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 126 GMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
G+ V N + PP +G PPPP + + PPPP
Sbjct: 264 GVEAVKNELRRQAPPPPPPSRGGPPPPPPPPHNSGPPPP 302
Score = 31.6 bits (70), Expect = 0.35
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 10/49 (20%)
Query: 84 RMYPPPLIEEPAFNVSYTRQPPNP-------GPGAQQPGPPYYTDPGGP 125
RMYPPP PA S PP P GP A P PP PG P
Sbjct: 341 RMYPPP---PPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPP 386
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 41.2 bits (95), Expect = 4e-04
Identities = 30/75 (40%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPG---AQQPGPPYYTDP---GGPGMNPVGNSMAMAFQV 140
PPP +VS T P PGPG P PP Y+ P GGP M P G S V
Sbjct: 221 PPP-------SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPS-----GV 268
Query: 141 PPNSPQGSVACPPPP 155
PP P PP P
Sbjct: 269 PPGMPGQPPGGPPKP 283
Score = 32.3 bits (72), Expect = 0.21
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 105 PNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P PGP PG P PGGP MA A P ++PQ + PP P +P PP
Sbjct: 261 PPPGPSGVPPGMP-GQPPGGPPKPWPEGPMANA-AAPTSTPQKLI--PPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPP--PPAYCNTPPP 163
PG Q PG P P GP N + +PP PP PPA PP
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP 328
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 41.2 bits (95), Expect = 4e-04
Identities = 30/75 (40%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPG---AQQPGPPYYTDP---GGPGMNPVGNSMAMAFQV 140
PPP +VS T P PGPG P PP Y+ P GGP M P G S V
Sbjct: 221 PPP-------SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPS-----GV 268
Query: 141 PPNSPQGSVACPPPP 155
PP P PP P
Sbjct: 269 PPGMPGQPPGGPPKP 283
Score = 32.3 bits (72), Expect = 0.21
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 105 PNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P PGP PG P PGGP MA A P ++PQ + PP P +P PP
Sbjct: 261 PPPGPSGVPPGMP-GQPPGGPPKPWPEGPMANA-AAPTSTPQKLI--PPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPP--PPAYCNTPPP 163
PG Q PG P P GP N + +PP PP PPA PP
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP 328
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 41.2 bits (95), Expect = 4e-04
Identities = 30/75 (40%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPG---AQQPGPPYYTDP---GGPGMNPVGNSMAMAFQV 140
PPP +VS T P PGPG P PP Y+ P GGP M P G S V
Sbjct: 221 PPP-------SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPS-----GV 268
Query: 141 PPNSPQGSVACPPPP 155
PP P PP P
Sbjct: 269 PPGMPGQPPGGPPKP 283
Score = 32.3 bits (72), Expect = 0.21
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 105 PNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P PGP PG P PGGP MA A P ++PQ + PP P +P PP
Sbjct: 261 PPPGPSGVPPGMP-GQPPGGPPKPWPEGPMANA-AAPTSTPQKLI--PPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPP--PPAYCNTPPP 163
PG Q PG P P GP N + +PP PP PPA PP
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP 328
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 41.2 bits (95), Expect = 4e-04
Identities = 30/75 (40%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPG---AQQPGPPYYTDP---GGPGMNPVGNSMAMAFQV 140
PPP +VS T P PGPG P PP Y+ P GGP M P G S V
Sbjct: 221 PPP-------SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPS-----GV 268
Query: 141 PPNSPQGSVACPPPP 155
PP P PP P
Sbjct: 269 PPGMPGQPPGGPPKP 283
Score = 32.3 bits (72), Expect = 0.21
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 105 PNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P PGP PG P PGGP MA A P ++PQ + PP P +P PP
Sbjct: 261 PPPGPSGVPPGMP-GQPPGGPPKPWPEGPMANA-AAPTSTPQKLI--PPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPP--PPAYCNTPPP 163
PG Q PG P P GP N + +PP PP PPA PP
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP 328
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 41.2 bits (95), Expect = 4e-04
Identities = 30/75 (40%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPG---AQQPGPPYYTDP---GGPGMNPVGNSMAMAFQV 140
PPP +VS T P PGPG P PP Y+ P GGP M P G S V
Sbjct: 221 PPP-------SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPS-----GV 268
Query: 141 PPNSPQGSVACPPPP 155
PP P PP P
Sbjct: 269 PPGMPGQPPGGPPKP 283
Score = 32.3 bits (72), Expect = 0.21
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 105 PNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P PGP PG P PGGP MA A P ++PQ + PP P +P PP
Sbjct: 261 PPPGPSGVPPGMP-GQPPGGPPKPWPEGPMANA-AAPTSTPQKLI--PPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPP--PPAYCNTPPP 163
PG Q PG P P GP N + +PP PP PPA PP
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP 328
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 41.2 bits (95), Expect = 4e-04
Identities = 30/75 (40%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPG---AQQPGPPYYTDP---GGPGMNPVGNSMAMAFQV 140
PPP +VS T P PGPG P PP Y+ P GGP M P G S V
Sbjct: 221 PPP-------SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPS-----GV 268
Query: 141 PPNSPQGSVACPPPP 155
PP P PP P
Sbjct: 269 PPGMPGQPPGGPPKP 283
Score = 32.3 bits (72), Expect = 0.21
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 105 PNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P PGP PG P PGGP MA A P ++PQ + PP P +P PP
Sbjct: 261 PPPGPSGVPPGMP-GQPPGGPPKPWPEGPMANA-AAPTSTPQKLI--PPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPP--PPAYCNTPPP 163
PG Q PG P P GP N + +PP PP PPA PP
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP 328
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 41.2 bits (95), Expect = 4e-04
Identities = 30/75 (40%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPG---AQQPGPPYYTDP---GGPGMNPVGNSMAMAFQV 140
PPP +VS T P PGPG P PP Y+ P GGP M P G S V
Sbjct: 221 PPP-------SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPS-----GV 268
Query: 141 PPNSPQGSVACPPPP 155
PP P PP P
Sbjct: 269 PPGMPGQPPGGPPKP 283
Score = 32.3 bits (72), Expect = 0.21
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 105 PNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPP 164
P PGP PG P PGGP MA A P ++PQ + PP P +P PP
Sbjct: 261 PPPGPSGVPPGMP-GQPPGGPPKPWPEGPMANA-AAPTSTPQKLI--PPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPP--PPAYCNTPPP 163
PG Q PG P P GP N + +PP PP PPA PP
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP 328
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 41.2 bits (95), Expect = 4e-04
Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 102 RQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTP 161
R PP PG G P PP T GP P + PP P PPPP+ N P
Sbjct: 357 RGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP------PPPPSSGNGP 410
Query: 162 PPP 164
PP
Sbjct: 411 APP 413
Score = 27.3 bits (59), Expect = 6.7
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 17/63 (26%)
Query: 104 PPNPGP---GAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNT 160
PP P P G Q P PP VG + + +PP P G PPPP
Sbjct: 314 PPPPPPSRGGNQLPRPPI-----------VGGNKGRSGPLPP-VPLG--IAPPPPTPRGP 359
Query: 161 PPP 163
PPP
Sbjct: 360 PPP 362
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 40.8 bits (94), Expect = 6e-04
Identities = 29/80 (36%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 1055 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1102
Query: 147 GSVACPPPPAY--CNTPPPP 164
V PPPP PPPP
Sbjct: 1103 PGVGIPPPPPLPGAGIPPPP 1122
Score = 40.8 bits (94), Expect = 6e-04
Identities = 29/80 (36%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 1099 PPPL---PGVGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1146
Query: 147 GSVACPPPPAY--CNTPPPP 164
V PPPP PPPP
Sbjct: 1147 PRVGIPPPPPLPGAGIPPPP 1166
Score = 40.0 bits (92), Expect = 0.001
Identities = 29/80 (36%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ +PP P
Sbjct: 1143 PPPL---PRVGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPG-----VGIPPPPPL 1190
Query: 147 GSVACPPPPAY--CNTPPPP 164
V PPPP PPPP
Sbjct: 1191 PGVGIPPPPPLPGAGIPPPP 1210
Score = 39.7 bits (91), Expect = 0.001
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 13/86 (15%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPG--------GPGMNPVGNSMAMAF 138
PPPL PP P PGA P PP G G G+ P A
Sbjct: 899 PPPLQ-----GTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAI 953
Query: 139 QVPPNSPQGSVACPPPPAYCNTPPPP 164
PP P + PPP PPPP
Sbjct: 954 PPPPPLPGAGIPLPPPLPGAGIPPPP 979
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 967 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1014
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1015 PGAGIPPPPPLPGAGIPPPP 1034
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 978 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1025
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1026 PGAGIPPPPPLPGAGIPPPP 1045
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 989 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1036
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1037 PGAGIPPPPPLPGAGIPPPP 1056
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 1000 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1047
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1048 PGAGIPPPPPLPGAGIPPPP 1067
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 1011 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1058
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1059 PGAGIPPPPPLPGAGIPPPP 1078
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 1022 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1069
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1070 PGAGIPPPPPLPGAGIPPPP 1089
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 1033 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1080
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1081 PGAGIPPPPPLPGAGIPPPP 1100
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + PP P
Sbjct: 1066 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPG---VGIPPPPPLPG 1115
Query: 147 GSVACPPPPAYCNTPPPP 164
+ PPP PPPP
Sbjct: 1116 AGIPPPPPLPGAGIPPPP 1133
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + PP P
Sbjct: 1110 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPR---VGIPPPPPLPG 1159
Query: 147 GSVACPPPPAYCNTPPPP 164
+ PPP PPPP
Sbjct: 1160 AGIPPPPPLPGAGIPPPP 1177
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 1044 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-----GIPPPPPL 1091
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1092 PGAGIPPPPPLPGVGIPPPP 1111
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + +PP P
Sbjct: 1077 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGVGIPPPPPLPGA-----GIPPPPPL 1124
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 1125 PGAGIPPPPPLPGAGIPPPP 1144
Score = 38.1 bits (87), Expect = 0.004
Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 13/80 (16%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPP + A PP P PGA P PP G P P+ + +PP P
Sbjct: 944 PPPPLPGAAI------PPPPPLPGAGIPLPPPLPGAGIPPPPPLPGA-----GIPPPPPL 992
Query: 147 GSVACPPPPAY--CNTPPPP 164
PPPP PPPP
Sbjct: 993 PGAGIPPPPPLPGAGIPPPP 1012
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PG P PP G P P+ + PP P
Sbjct: 1088 PPPL---PGAGIP----PPPPLPGVGIPPPPPLPGAGIPPPPPLPGA---GIPPPPPLPG 1137
Query: 147 GSVACPPPPAYCNTPPPP 164
+ PPP PPPP
Sbjct: 1138 AGIPPPPPLPRVGIPPPP 1155
Score = 37.0 bits (84), Expect = 0.008
Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PG P PP G P P+ PP P
Sbjct: 1176 PPPL---PGVGIP----PPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPP 1228
Query: 147 GSVACPPPPAYCNTPPPPYEQV 168
G+ PPPP + PP QV
Sbjct: 1229 GT-GIPPPPLLPVSGPPLLPQV 1249
Score = 36.6 bits (83), Expect = 0.011
Identities = 29/86 (33%), Positives = 33/86 (38%), Gaps = 15/86 (17%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNS------MAMAFQV 140
PPPL P + PP P PGA P PP G P P+ + +
Sbjct: 1121 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGI 1173
Query: 141 PPNSPQGSVACPPPPAY--CNTPPPP 164
PP P V PPPP PPPP
Sbjct: 1174 PPPPPLPGVGIPPPPPLPGVGIPPPP 1199
Score = 35.4 bits (80), Expect = 0.024
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPPL P + PP P PGA P PP G P P+ + PP P
Sbjct: 1154 PPPL---PGAGIP----PPPPLPGAGIPPPPPLPGVGIPPPPPLPG---VGIPPPPPLPG 1203
Query: 147 GSVACPPPPAYCNTPPPP 164
+ PPP PP P
Sbjct: 1204 AGIPPPPPLPGMGIPPAP 1221
Score = 35.4 bits (80), Expect = 0.024
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQV----PP 142
PPPL P + PP P PG P PP G P + VG+S QV PP
Sbjct: 1209 PPPL---PGMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPP 1265
Query: 143 NSPQG 147
P G
Sbjct: 1266 PLPSG 1270
Score = 35.0 bits (79), Expect = 0.032
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 16/87 (18%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPG-----GPGMNPVGNSMA----MA 137
PPPL P + PP P PGA P PP G P + P G + +
Sbjct: 1187 PPPL---PGVGIP----PPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLP 1239
Query: 138 FQVPPNSPQGSVACPPPPAYCNTPPPP 164
PP PQ + P P C PPP
Sbjct: 1240 VSGPPLLPQVGSSTLPTPQVCGFLPPP 1266
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.4 bits (93), Expect = 8e-04
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 82 RRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPG------GPGMNP-VGNSM 134
+++ PPP + P + PP+P P QQ PP D GPG P VG++
Sbjct: 67 QQQQQPPPQ-QPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAP 125
Query: 135 AMAFQVPPNSPQGSVACP---------PPPAYCNTPP--PP 164
+ PP +P S A P PPPA + PP PP
Sbjct: 126 PASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPP 166
Score = 37.0 bits (84), Expect = 0.008
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTD--PGGPGMNPVGNSMAMAFQVPPNS 144
PP P + PP GPG PP T PG P P + + P +
Sbjct: 125 PPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGV-------PTT 177
Query: 145 PQGSVACPPPPAYCNTPPPPYEQ 167
P + PPPPA P P +Q
Sbjct: 178 PPQAGGPPPPPAAVPGPGPGPKQ 200
Score = 35.0 bits (79), Expect = 0.032
Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 94 PAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPP 153
P ++ R P PGPG P PP P Q PP+ P P
Sbjct: 36 PGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPH---PQ 92
Query: 154 PPAYCNTPPPPYE 166
P PPPP +
Sbjct: 93 PHQQQQPPPPPQD 105
Score = 31.6 bits (70), Expect = 0.35
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 10/65 (15%)
Query: 102 RQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTP 161
R PP PG G Q P PG G P +PP P PPP
Sbjct: 32 RSPP-PGMGLNQNRGPMGPGPGQSGPKP---------PIPPPPPHQQQQQPPPQQPPPQQ 81
Query: 162 PPPYE 166
PPP++
Sbjct: 82 PPPHQ 86
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 40.4 bits (93), Expect = 8e-04
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Query: 87 PPPLIEEPAFNVSY----TRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPP 142
PPPL PA + T PP P PGA PP+ PG PG+ + +PP
Sbjct: 410 PPPLGPPPAPPLRPPGPPTGLPPGPPPGA----PPFLRPPGMPGLRG-----PLPRLLPP 460
Query: 143 NSPQGSVACPPPPAYCNTPPPP 164
P G PPP PP P
Sbjct: 461 GPPPGRPPGPPPGPPPGLPPGP 482
Score = 32.7 bits (73), Expect = 0.16
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 15/66 (22%)
Query: 104 PPNPGPG---AQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNT 160
PP P PG PGPP PG P P ++PP +P G PPP
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP-------RLPPPAPPG---IPPPRPGMMR 508
Query: 161 PP--PP 164
PP PP
Sbjct: 509 PPLVPP 514
Score = 31.2 bits (69), Expect = 0.46
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Query: 104 PPNPGPGAQQPGPP------YYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPP 155
PP P PG PGPP P PG+ P M VPP P PP P
Sbjct: 471 PPGPPPGLP-PGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAP 527
Score = 28.9 bits (63), Expect = 2.3
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPP 155
PP+ PGPP P P + P G + PP P G+ PP
Sbjct: 398 PPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGL----PPGPPPGAPPFLRPP 445
Score = 28.1 bits (61), Expect = 3.9
Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Query: 107 PGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYE 166
P PGAQ P T GP V + V P P G PPP PPPP
Sbjct: 157 PLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGV-PRLPPGRKPPGPPPG----PPPP-- 209
Query: 167 QVVK 170
QVV+
Sbjct: 210 QVVQ 213
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 40.0 bits (92), Expect = 0.001
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 87 PPPLIEE-PAFNVSYTRQPPNPGPGA----QQPGPPYY---TDPGGPGMNPVGNSMAMAF 138
PPP + P+ T PP PG+ + PP Y + P GPG G+
Sbjct: 636 PPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPG 695
Query: 139 QVPPNSPQGSVACPPPPAYCNTPPP 163
+PP P G + PPPPA + PP
Sbjct: 696 PLPPAGPSGLPSLPPPPAAPASGPP 720
Score = 30.8 bits (68), Expect = 0.60
Identities = 27/92 (29%), Positives = 32/92 (34%), Gaps = 31/92 (33%)
Query: 104 PPNP-----GPGAQQPGPPYYTDPGG---------------PGMNPVGNSMAMAFQVPPN 143
PP+P G G GPP GG P P+ S + A PP
Sbjct: 214 PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPT 273
Query: 144 SPQ------GSVACPPPPAYC-----NTPPPP 164
P G++ PPPA N PPPP
Sbjct: 274 KPPTTPVGGGNLPSAPPPANFPHVTPNLPPPP 305
Score = 30.4 bits (67), Expect = 0.79
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 23/86 (26%)
Query: 83 RRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPP 142
R +PPPL PP+P P P P + P + P G + P
Sbjct: 157 RPYHPPPLF------------PPSPQPPDSTPRQPEASFEPHPSVTPTG------YHAPM 198
Query: 143 NSPQGSVACPPPPAYCNTPPPPYEQV 168
P + PP A PPP+ Q+
Sbjct: 199 EPPTSRMFQAPPGA-----PPPHPQL 219
Score = 27.3 bits (59), Expect = 6.7
Identities = 16/55 (29%), Positives = 20/55 (36%)
Query: 102 RQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPA 156
+ PP P + P P PVG + P N P + PPPPA
Sbjct: 252 QHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPA 306
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 40.0 bits (92), Expect = 0.001
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 87 PPPLIEE-PAFNVSYTRQPPNPGPGA----QQPGPPYY---TDPGGPGMNPVGNSMAMAF 138
PPP + P+ T PP PG+ + PP Y + P GPG G+
Sbjct: 636 PPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPG 695
Query: 139 QVPPNSPQGSVACPPPPAYCNTPPP 163
+PP P G + PPPPA + PP
Sbjct: 696 PLPPAGPSGLPSLPPPPAAPASGPP 720
Score = 30.8 bits (68), Expect = 0.60
Identities = 27/92 (29%), Positives = 32/92 (34%), Gaps = 31/92 (33%)
Query: 104 PPNP-----GPGAQQPGPPYYTDPGG---------------PGMNPVGNSMAMAFQVPPN 143
PP+P G G GPP GG P P+ S + A PP
Sbjct: 214 PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPT 273
Query: 144 SPQ------GSVACPPPPAYC-----NTPPPP 164
P G++ PPPA N PPPP
Sbjct: 274 KPPTTPVGGGNLPSAPPPANFPHVTPNLPPPP 305
Score = 30.4 bits (67), Expect = 0.79
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 23/86 (26%)
Query: 83 RRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPP 142
R +PPPL PP+P P P P + P + P G + P
Sbjct: 157 RPYHPPPLF------------PPSPQPPDSTPRQPEASFEPHPSVTPTG------YHAPM 198
Query: 143 NSPQGSVACPPPPAYCNTPPPPYEQV 168
P + PP A PPP+ Q+
Sbjct: 199 EPPTSRMFQAPPGA-----PPPHPQL 219
Score = 27.3 bits (59), Expect = 6.7
Identities = 16/55 (29%), Positives = 20/55 (36%)
Query: 102 RQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPA 156
+ PP P + P P PVG + P N P + PPPPA
Sbjct: 252 QHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPA 306
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPP P V PP G+ G P GG G +G + A PP P
Sbjct: 22 PPPAALAPVSGVVLPA-PPAVSAGSSPAGSP----GGGAGGEGLGAAAAALLLHPPPPPP 76
Query: 147 GSVACPPPPAYCNTPPPP 164
+ A PPPP PPPP
Sbjct: 77 PATAAPPPP-----PPPP 89
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/76 (35%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 88 PPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQG 147
PP+ P PP P P + P PP P P+ NS A PPN P G
Sbjct: 672 PPVSAGPPLPPPPPPPPPLPPPSSAGPPPP-------PPPPPLPNSPA-----PPN-PGG 718
Query: 148 SVACPPPPAYCNTPPP 163
PPPP PPP
Sbjct: 719 PPPAPPPPGLAPPPPP 734
Score = 38.1 bits (87), Expect = 0.004
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 82 RRRMYPPPLIEEPAFNVSYTRQPPNP-GPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQV 140
+++ PPP PA S PP P G G+ P PP GP + P +
Sbjct: 641 QQKALPPP----PA---SIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPP---PL 690
Query: 141 PPNSPQGSVACPPPPAYCNTPPPP 164
PP S G PPPP N+P PP
Sbjct: 691 PPPSSAGPPPPPPPPPLPNSPAPP 714
Score = 37.7 bits (86), Expect = 0.005
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 13/72 (18%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGM-NPVGNSMAMAFQVPPNSP 145
PPPL PA PPNPG P PP P PG+ +G+S + P P
Sbjct: 704 PPPLPNSPA--------PPNPGGPPPAPPPPGLAPPPPPGLFFGLGSSSSQC----PRKP 751
Query: 146 QGSVACPPPPAY 157
+CP P Y
Sbjct: 752 AIEPSCPMKPLY 763
Score = 35.8 bits (81), Expect = 0.019
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 15/69 (21%)
Query: 87 PPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQ 146
PPP P + PP P P P P +PGGP PP P
Sbjct: 681 PPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGP---------------PPAPPP 725
Query: 147 GSVACPPPP 155
+A PPPP
Sbjct: 726 PGLAPPPPP 734
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/83 (34%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNP---GPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPN 143
PPP A PP P PG P PP P PV + + VP +
Sbjct: 354 PPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVH 413
Query: 144 S-PQGSV-ACPPPPAYCNTPPPP 164
PQG V PPPP PPPP
Sbjct: 414 PLPQGEVQGLPPPP-----PPPP 431
Score = 29.3 bits (64), Expect = 1.8
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPP 163
P G P PP P PG+ P A PP+ + + P P PP
Sbjct: 416 PQGEVQGLPPPPPPPPLPP--PGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS 473
Query: 164 PYEQVVKA 171
P QV+ A
Sbjct: 474 PPSQVIPA 481
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/83 (34%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNP---GPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPN 143
PPP A PP P PG P PP P PV + + VP +
Sbjct: 354 PPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVH 413
Query: 144 S-PQGSV-ACPPPPAYCNTPPPP 164
PQG V PPPP PPPP
Sbjct: 414 PLPQGEVQGLPPPP-----PPPP 431
Score = 29.3 bits (64), Expect = 1.8
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPP 163
P G P PP P PG+ P A PP+ + + P P PP
Sbjct: 416 PQGEVQGLPPPPPPPPLPP--PGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS 473
Query: 164 PYEQVVKA 171
P QV+ A
Sbjct: 474 PPSQVIPA 481
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/83 (34%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNP---GPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPN 143
PPP A PP P PG P PP P PV + + VP +
Sbjct: 354 PPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVH 413
Query: 144 S-PQGSV-ACPPPPAYCNTPPPP 164
PQG V PPPP PPPP
Sbjct: 414 PLPQGEVQGLPPPP-----PPPP 431
Score = 29.3 bits (64), Expect = 1.8
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPP 163
P G P PP P PG+ P A PP+ + + P P PP
Sbjct: 416 PQGEVQGLPPPPPPPPLPP--PGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS 473
Query: 164 PYEQVVKA 171
P QV+ A
Sbjct: 474 PPSQVIPA 481
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/83 (34%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 87 PPPLIEEPAFNVSYTRQPPNP---GPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPN 143
PPP A PP P PG P PP P PV + + VP +
Sbjct: 354 PPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVH 413
Query: 144 S-PQGSV-ACPPPPAYCNTPPPP 164
PQG V PPPP PPPP
Sbjct: 414 PLPQGEVQGLPPPP-----PPPP 431
Score = 29.3 bits (64), Expect = 1.8
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPP 163
P G P PP P PG+ P A PP+ + + P P PP
Sbjct: 416 PQGEVQGLPPPPPPPPLPP--PGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS 473
Query: 164 PYEQVVKA 171
P QV+ A
Sbjct: 474 PPSQVIPA 481
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 38.9 bits (89), Expect = 0.002
Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 104 PPNPGPGAQQPGPPYYTDPGGPGMN--PVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTP 161
PP P P Q P PP P P + P+G + P P G PPPP Y P
Sbjct: 595 PPAPTPPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDG----PPPPEYPPPP 650
Query: 162 PPP 164
PPP
Sbjct: 651 PPP 653
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 26/103 (25%)
Query: 89 PLIEEPAFNVSYTRQPPN--------PGPGAQQPGP---------------PYYTDPGGP 125
P + P + + + + PP PGPG+ PG P + P P
Sbjct: 992 PHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPP 1051
Query: 126 GMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQV 168
GM P+ ++ + +VP +P G PPPP PPPP + V
Sbjct: 1052 GMPPMPGNI-LGPRVPLTAPNGMY--PPPPQQQPPPPPPADGV 1091
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.143 0.505
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,263,427
Number of Sequences: 37866
Number of extensions: 818144
Number of successful extensions: 7731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 557
Number of HSP's that attempted gapping in prelim test: 4783
Number of HSP's gapped (non-prelim): 2521
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.