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Search of human proteins with 105990532
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|105990532 apolipoprotein B precursor [Homo sapiens]
(4563 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|105990532 apolipoprotein B precursor [Homo sapiens] 8977 0.0
gi|116686120 periaxin isoform 2 [Homo sapiens] 57 5e-07
gi|55770834 centromere protein F [Homo sapiens] 47 4e-04
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 47 6e-04
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 46 7e-04
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 46 7e-04
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 46 7e-04
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 46 7e-04
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 46 7e-04
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 46 7e-04
gi|221316624 dystonin isoform 4 [Homo sapiens] 46 0.001
gi|221316622 dystonin isoform 3 [Homo sapiens] 46 0.001
gi|221316618 dystonin isoform 2 [Homo sapiens] 46 0.001
gi|34577047 dystonin isoform 1 [Homo sapiens] 46 0.001
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 46 0.001
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 45 0.002
gi|118498368 kinectin 1 isoform c [Homo sapiens] 45 0.002
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 44 0.003
gi|156104908 myosin heavy chain 6 [Homo sapiens] 44 0.004
gi|58535453 CDK5 regulatory subunit associated protein 2 isoform... 44 0.005
gi|58535451 CDK5 regulatory subunit associated protein 2 isoform... 44 0.005
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 43 0.008
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 42 0.011
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 42 0.011
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 42 0.011
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 42 0.011
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 42 0.011
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 42 0.011
gi|34577114 cytomatrix protein p110 [Homo sapiens] 42 0.018
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 41 0.024
>gi|105990532 apolipoprotein B precursor [Homo sapiens]
Length = 4563
Score = 8977 bits (23293), Expect = 0.0
Identities = 4563/4563 (100%), Positives = 4563/4563 (100%)
Query: 1 MDPPRPALLALLALPALLLLLLAGARAEEEMLENVSLVCPKDATRFKHLRKYTYNYEAES 60
MDPPRPALLALLALPALLLLLLAGARAEEEMLENVSLVCPKDATRFKHLRKYTYNYEAES
Sbjct: 1 MDPPRPALLALLALPALLLLLLAGARAEEEMLENVSLVCPKDATRFKHLRKYTYNYEAES 60
Query: 61 SSGVPGTADSRSATRINCKVELEVPQLCSFILKTSQCTLKEVYGFNPEGKALLKKTKNSE 120
SSGVPGTADSRSATRINCKVELEVPQLCSFILKTSQCTLKEVYGFNPEGKALLKKTKNSE
Sbjct: 61 SSGVPGTADSRSATRINCKVELEVPQLCSFILKTSQCTLKEVYGFNPEGKALLKKTKNSE 120
Query: 121 EFAAAMSRYELKLAIPEGKQVFLYPEKDEPTYILNIKRGIISALLVPPETEEAKQVLFLD 180
EFAAAMSRYELKLAIPEGKQVFLYPEKDEPTYILNIKRGIISALLVPPETEEAKQVLFLD
Sbjct: 121 EFAAAMSRYELKLAIPEGKQVFLYPEKDEPTYILNIKRGIISALLVPPETEEAKQVLFLD 180
Query: 181 TVYGNCSTHFTVKTRKGNVATEISTERDLGQCDRFKPIRTGISPLALIKGMTRPLSTLIS 240
TVYGNCSTHFTVKTRKGNVATEISTERDLGQCDRFKPIRTGISPLALIKGMTRPLSTLIS
Sbjct: 181 TVYGNCSTHFTVKTRKGNVATEISTERDLGQCDRFKPIRTGISPLALIKGMTRPLSTLIS 240
Query: 241 SSQSCQYTLDAKRKHVAEAICKEQHLFLPFSYKNKYGMVAQVTQTLKLEDTPKINSRFFG 300
SSQSCQYTLDAKRKHVAEAICKEQHLFLPFSYKNKYGMVAQVTQTLKLEDTPKINSRFFG
Sbjct: 241 SSQSCQYTLDAKRKHVAEAICKEQHLFLPFSYKNKYGMVAQVTQTLKLEDTPKINSRFFG 300
Query: 301 EGTKKMGLAFESTKSTSPPKQAEAVLKTLQELKKLTISEQNIQRANLFNKLVTELRGLSD 360
EGTKKMGLAFESTKSTSPPKQAEAVLKTLQELKKLTISEQNIQRANLFNKLVTELRGLSD
Sbjct: 301 EGTKKMGLAFESTKSTSPPKQAEAVLKTLQELKKLTISEQNIQRANLFNKLVTELRGLSD 360
Query: 361 EAVTSLLPQLIEVSSPITLQALVQCGQPQCSTHILQWLKRVHANPLLIDVVTYLVALIPE 420
EAVTSLLPQLIEVSSPITLQALVQCGQPQCSTHILQWLKRVHANPLLIDVVTYLVALIPE
Sbjct: 361 EAVTSLLPQLIEVSSPITLQALVQCGQPQCSTHILQWLKRVHANPLLIDVVTYLVALIPE 420
Query: 421 PSAQQLREIFNMARDQRSRATLYALSHAVNNYHKTNPTGTQELLDIANYLMEQIQDDCTG 480
PSAQQLREIFNMARDQRSRATLYALSHAVNNYHKTNPTGTQELLDIANYLMEQIQDDCTG
Sbjct: 421 PSAQQLREIFNMARDQRSRATLYALSHAVNNYHKTNPTGTQELLDIANYLMEQIQDDCTG 480
Query: 481 DEDYTYLILRVIGNMGQTMEQLTPELKSSILKCVQSTKPSLMIQKAAIQALRKMEPKDKD 540
DEDYTYLILRVIGNMGQTMEQLTPELKSSILKCVQSTKPSLMIQKAAIQALRKMEPKDKD
Sbjct: 481 DEDYTYLILRVIGNMGQTMEQLTPELKSSILKCVQSTKPSLMIQKAAIQALRKMEPKDKD 540
Query: 541 QEVLLQTFLDDASPGDKRLAAYLMLMRSPSQADINKIVQILPWEQNEQVKNFVASHIANI 600
QEVLLQTFLDDASPGDKRLAAYLMLMRSPSQADINKIVQILPWEQNEQVKNFVASHIANI
Sbjct: 541 QEVLLQTFLDDASPGDKRLAAYLMLMRSPSQADINKIVQILPWEQNEQVKNFVASHIANI 600
Query: 601 LNSEELDIQDLKKLVKEALKESQLPTVMDFRKFSRNYQLYKSVSLPSLDPASAKIEGNLI 660
LNSEELDIQDLKKLVKEALKESQLPTVMDFRKFSRNYQLYKSVSLPSLDPASAKIEGNLI
Sbjct: 601 LNSEELDIQDLKKLVKEALKESQLPTVMDFRKFSRNYQLYKSVSLPSLDPASAKIEGNLI 660
Query: 661 FDPNNYLPKESMLKTTLTAFGFASADLIEIGLEGKGFEPTLEALFGKQGFFPDSVNKALY 720
FDPNNYLPKESMLKTTLTAFGFASADLIEIGLEGKGFEPTLEALFGKQGFFPDSVNKALY
Sbjct: 661 FDPNNYLPKESMLKTTLTAFGFASADLIEIGLEGKGFEPTLEALFGKQGFFPDSVNKALY 720
Query: 721 WVNGQVPDGVSKVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARAYLRIL 780
WVNGQVPDGVSKVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARAYLRIL
Sbjct: 721 WVNGQVPDGVSKVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARAYLRIL 780
Query: 781 GEELGFASLHDLQLLGKLLLMGARTLQGIPQMIGEVIRKGSKNDFFLHYIFMENAFELPT 840
GEELGFASLHDLQLLGKLLLMGARTLQGIPQMIGEVIRKGSKNDFFLHYIFMENAFELPT
Sbjct: 781 GEELGFASLHDLQLLGKLLLMGARTLQGIPQMIGEVIRKGSKNDFFLHYIFMENAFELPT 840
Query: 841 GAGLQLQISSSGVIAPGAKAGVKLEVANMQAELVAKPSVSVEFVTNMGIIIPDFARSGVQ 900
GAGLQLQISSSGVIAPGAKAGVKLEVANMQAELVAKPSVSVEFVTNMGIIIPDFARSGVQ
Sbjct: 841 GAGLQLQISSSGVIAPGAKAGVKLEVANMQAELVAKPSVSVEFVTNMGIIIPDFARSGVQ 900
Query: 901 MNTNFFHESGLEAHVALKAGKLKFIIPSPKRPVKLLSGGNTLHLVSTTKTEVIPPLIENR 960
MNTNFFHESGLEAHVALKAGKLKFIIPSPKRPVKLLSGGNTLHLVSTTKTEVIPPLIENR
Sbjct: 901 MNTNFFHESGLEAHVALKAGKLKFIIPSPKRPVKLLSGGNTLHLVSTTKTEVIPPLIENR 960
Query: 961 QSWSVCKQVFPGLNYCTSGAYSNASSTDSASYYPLTGDTRLELELRPTGEIEQYSVSATY 1020
QSWSVCKQVFPGLNYCTSGAYSNASSTDSASYYPLTGDTRLELELRPTGEIEQYSVSATY
Sbjct: 961 QSWSVCKQVFPGLNYCTSGAYSNASSTDSASYYPLTGDTRLELELRPTGEIEQYSVSATY 1020
Query: 1021 ELQREDRALVDTLKFVTQAEGAKQTEATMTFKYNRQSMTLSSEVQIPDFDVDLGTILRVN 1080
ELQREDRALVDTLKFVTQAEGAKQTEATMTFKYNRQSMTLSSEVQIPDFDVDLGTILRVN
Sbjct: 1021 ELQREDRALVDTLKFVTQAEGAKQTEATMTFKYNRQSMTLSSEVQIPDFDVDLGTILRVN 1080
Query: 1081 DESTEGKTSYRLTLDIQNKKITEVALMGHLSCDTKEERKIKGVISIPRLQAEARSEILAH 1140
DESTEGKTSYRLTLDIQNKKITEVALMGHLSCDTKEERKIKGVISIPRLQAEARSEILAH
Sbjct: 1081 DESTEGKTSYRLTLDIQNKKITEVALMGHLSCDTKEERKIKGVISIPRLQAEARSEILAH 1140
Query: 1141 WSPAKLLLQMDSSATAYGSTVSKRVAWHYDEEKIEFEWNTGTNVDTKKMTSNFPVDLSDY 1200
WSPAKLLLQMDSSATAYGSTVSKRVAWHYDEEKIEFEWNTGTNVDTKKMTSNFPVDLSDY
Sbjct: 1141 WSPAKLLLQMDSSATAYGSTVSKRVAWHYDEEKIEFEWNTGTNVDTKKMTSNFPVDLSDY 1200
Query: 1201 PKSLHMYANRLLDHRVPQTDMTFRHVGSKLIVAMSSWLQKASGSLPYTQTLQDHLNSLKE 1260
PKSLHMYANRLLDHRVPQTDMTFRHVGSKLIVAMSSWLQKASGSLPYTQTLQDHLNSLKE
Sbjct: 1201 PKSLHMYANRLLDHRVPQTDMTFRHVGSKLIVAMSSWLQKASGSLPYTQTLQDHLNSLKE 1260
Query: 1261 FNLQNMGLPDFHIPENLFLKSDGRVKYTLNKNSLKIEIPLPFGGKSSRDLKMLETVRTPA 1320
FNLQNMGLPDFHIPENLFLKSDGRVKYTLNKNSLKIEIPLPFGGKSSRDLKMLETVRTPA
Sbjct: 1261 FNLQNMGLPDFHIPENLFLKSDGRVKYTLNKNSLKIEIPLPFGGKSSRDLKMLETVRTPA 1320
Query: 1321 LHFKSVGFHLPSREFQVPTFTIPKLYQLQVPLLGVLDLSTNVYSNLYNWSASYSGGNTST 1380
LHFKSVGFHLPSREFQVPTFTIPKLYQLQVPLLGVLDLSTNVYSNLYNWSASYSGGNTST
Sbjct: 1321 LHFKSVGFHLPSREFQVPTFTIPKLYQLQVPLLGVLDLSTNVYSNLYNWSASYSGGNTST 1380
Query: 1381 DHFSLRARYHMKADSVVDLLSYNVQGSGETTYDHKNTFTLSCDGSLRHKFLDSNIKFSHV 1440
DHFSLRARYHMKADSVVDLLSYNVQGSGETTYDHKNTFTLSCDGSLRHKFLDSNIKFSHV
Sbjct: 1381 DHFSLRARYHMKADSVVDLLSYNVQGSGETTYDHKNTFTLSCDGSLRHKFLDSNIKFSHV 1440
Query: 1441 EKLGNNPVSKGLLIFDASSSWGPQMSASVHLDSKKKQHLFVKEVKIDGQFRVSSFYAKGT 1500
EKLGNNPVSKGLLIFDASSSWGPQMSASVHLDSKKKQHLFVKEVKIDGQFRVSSFYAKGT
Sbjct: 1441 EKLGNNPVSKGLLIFDASSSWGPQMSASVHLDSKKKQHLFVKEVKIDGQFRVSSFYAKGT 1500
Query: 1501 YGLSCQRDPNTGRLNGESNLRFNSSYLQGTNQITGRYEDGTLSLTSTSDLQSGIIKNTAS 1560
YGLSCQRDPNTGRLNGESNLRFNSSYLQGTNQITGRYEDGTLSLTSTSDLQSGIIKNTAS
Sbjct: 1501 YGLSCQRDPNTGRLNGESNLRFNSSYLQGTNQITGRYEDGTLSLTSTSDLQSGIIKNTAS 1560
Query: 1561 LKYENYELTLKSDTNGKYKNFATSNKMDMTFSKQNALLRSEYQADYESLRFFSLLSGSLN 1620
LKYENYELTLKSDTNGKYKNFATSNKMDMTFSKQNALLRSEYQADYESLRFFSLLSGSLN
Sbjct: 1561 LKYENYELTLKSDTNGKYKNFATSNKMDMTFSKQNALLRSEYQADYESLRFFSLLSGSLN 1620
Query: 1621 SHGLELNADILGTDKINSGAHKATLRIGQDGISTSATTNLKCSLLVLENELNAELGLSGA 1680
SHGLELNADILGTDKINSGAHKATLRIGQDGISTSATTNLKCSLLVLENELNAELGLSGA
Sbjct: 1621 SHGLELNADILGTDKINSGAHKATLRIGQDGISTSATTNLKCSLLVLENELNAELGLSGA 1680
Query: 1681 SMKLTTNGRFREHNAKFSLDGKAALTELSLGSAYQAMILGVDSKNIFNFKVSQEGLKLSN 1740
SMKLTTNGRFREHNAKFSLDGKAALTELSLGSAYQAMILGVDSKNIFNFKVSQEGLKLSN
Sbjct: 1681 SMKLTTNGRFREHNAKFSLDGKAALTELSLGSAYQAMILGVDSKNIFNFKVSQEGLKLSN 1740
Query: 1741 DMMGSYAEMKFDHTNSLNIAGLSLDFSSKLDNIYSSDKFYKQTVNLQLQPYSLVTTLNSD 1800
DMMGSYAEMKFDHTNSLNIAGLSLDFSSKLDNIYSSDKFYKQTVNLQLQPYSLVTTLNSD
Sbjct: 1741 DMMGSYAEMKFDHTNSLNIAGLSLDFSSKLDNIYSSDKFYKQTVNLQLQPYSLVTTLNSD 1800
Query: 1801 LKYNALDLTNNGKLRLEPLKLHVAGNLKGAYQNNEIKHIYAISSAALSASYKADTVAKVQ 1860
LKYNALDLTNNGKLRLEPLKLHVAGNLKGAYQNNEIKHIYAISSAALSASYKADTVAKVQ
Sbjct: 1801 LKYNALDLTNNGKLRLEPLKLHVAGNLKGAYQNNEIKHIYAISSAALSASYKADTVAKVQ 1860
Query: 1861 GVEFSHRLNTDIAGLASAIDMSTNYNSDSLHFSNVFRSVMAPFTMTIDAHTNGNGKLALW 1920
GVEFSHRLNTDIAGLASAIDMSTNYNSDSLHFSNVFRSVMAPFTMTIDAHTNGNGKLALW
Sbjct: 1861 GVEFSHRLNTDIAGLASAIDMSTNYNSDSLHFSNVFRSVMAPFTMTIDAHTNGNGKLALW 1920
Query: 1921 GEHTGQLYSKFLLKAEPLAFTFSHDYKGSTSHHLVSRKSISAALEHKVSALLTPAEQTGT 1980
GEHTGQLYSKFLLKAEPLAFTFSHDYKGSTSHHLVSRKSISAALEHKVSALLTPAEQTGT
Sbjct: 1921 GEHTGQLYSKFLLKAEPLAFTFSHDYKGSTSHHLVSRKSISAALEHKVSALLTPAEQTGT 1980
Query: 1981 WKLKTQFNNNEYSQDLDAYNTKDKIGVELTGRTLADLTLLDSPIKVPLLLSEPINIIDAL 2040
WKLKTQFNNNEYSQDLDAYNTKDKIGVELTGRTLADLTLLDSPIKVPLLLSEPINIIDAL
Sbjct: 1981 WKLKTQFNNNEYSQDLDAYNTKDKIGVELTGRTLADLTLLDSPIKVPLLLSEPINIIDAL 2040
Query: 2041 EMRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLK 2100
EMRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLK
Sbjct: 2041 EMRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLK 2100
Query: 2101 HINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIAL 2160
HINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIAL
Sbjct: 2101 HINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIAL 2160
Query: 2161 DDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHYHIRV 2220
DDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHYHIRV
Sbjct: 2161 DDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHYHIRV 2220
Query: 2221 NLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQH 2280
NLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQH
Sbjct: 2221 NLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQH 2280
Query: 2281 LAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAK 2340
LAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAK
Sbjct: 2281 LAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAK 2340
Query: 2341 VHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDA 2400
VHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDA
Sbjct: 2341 VHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDA 2400
Query: 2401 VKKLNELSFKTFIEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELP 2460
VKKLNELSFKTFIEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELP
Sbjct: 2401 VKKLNELSFKTFIEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELP 2460
Query: 2461 QKAEALKLFLEETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLEDTR 2520
QKAEALKLFLEETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLEDTR
Sbjct: 2461 QKAEALKLFLEETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLEDTR 2520
Query: 2521 DRMYQMDIQQELQRYLSLVGQVYSTLVTYISDWWTLAAKNLTDFAEQYSIQDWAKRMKAL 2580
DRMYQMDIQQELQRYLSLVGQVYSTLVTYISDWWTLAAKNLTDFAEQYSIQDWAKRMKAL
Sbjct: 2521 DRMYQMDIQQELQRYLSLVGQVYSTLVTYISDWWTLAAKNLTDFAEQYSIQDWAKRMKAL 2580
Query: 2581 VEQGFTVPEIKTILGTMPAFEVSLQALQKATFQTPDFIVPLTDLRIPSVQINFKDLKNIK 2640
VEQGFTVPEIKTILGTMPAFEVSLQALQKATFQTPDFIVPLTDLRIPSVQINFKDLKNIK
Sbjct: 2581 VEQGFTVPEIKTILGTMPAFEVSLQALQKATFQTPDFIVPLTDLRIPSVQINFKDLKNIK 2640
Query: 2641 IPSRFSTPEFTILNTFHIPSFTIDFVEMKVKIIRTIDQMLNSELQWPVPDIYLRDLKVED 2700
IPSRFSTPEFTILNTFHIPSFTIDFVEMKVKIIRTIDQMLNSELQWPVPDIYLRDLKVED
Sbjct: 2641 IPSRFSTPEFTILNTFHIPSFTIDFVEMKVKIIRTIDQMLNSELQWPVPDIYLRDLKVED 2700
Query: 2701 IPLARITLPDFRLPEIAIPEFIIPTLNLNDFQVPDLHIPEFQLPHISHTIEVPTFGKLYS 2760
IPLARITLPDFRLPEIAIPEFIIPTLNLNDFQVPDLHIPEFQLPHISHTIEVPTFGKLYS
Sbjct: 2701 IPLARITLPDFRLPEIAIPEFIIPTLNLNDFQVPDLHIPEFQLPHISHTIEVPTFGKLYS 2760
Query: 2761 ILKIQSPLFTLDANADIGNGTTSANEAGIAASITAKGESKLEVLNFDFQANAQLSNPKIN 2820
ILKIQSPLFTLDANADIGNGTTSANEAGIAASITAKGESKLEVLNFDFQANAQLSNPKIN
Sbjct: 2761 ILKIQSPLFTLDANADIGNGTTSANEAGIAASITAKGESKLEVLNFDFQANAQLSNPKIN 2820
Query: 2821 PLALKESVKFSSKYLRTEHGSEMLFFGNAIEGKSNTVASLHTEKNTLELSNGVIVKINNQ 2880
PLALKESVKFSSKYLRTEHGSEMLFFGNAIEGKSNTVASLHTEKNTLELSNGVIVKINNQ
Sbjct: 2821 PLALKESVKFSSKYLRTEHGSEMLFFGNAIEGKSNTVASLHTEKNTLELSNGVIVKINNQ 2880
Query: 2881 LTLDSNTKYFHKLNIPKLDFSSQADLRNEIKTLLKAGHIAWTSSGKGSWKWACPRFSDEG 2940
LTLDSNTKYFHKLNIPKLDFSSQADLRNEIKTLLKAGHIAWTSSGKGSWKWACPRFSDEG
Sbjct: 2881 LTLDSNTKYFHKLNIPKLDFSSQADLRNEIKTLLKAGHIAWTSSGKGSWKWACPRFSDEG 2940
Query: 2941 THESQISFTIEGPLTSFGLSNKINSKHLRVNQNLVYESGSLNFSKLEIQSQVDSQHVGHS 3000
THESQISFTIEGPLTSFGLSNKINSKHLRVNQNLVYESGSLNFSKLEIQSQVDSQHVGHS
Sbjct: 2941 THESQISFTIEGPLTSFGLSNKINSKHLRVNQNLVYESGSLNFSKLEIQSQVDSQHVGHS 3000
Query: 3001 VLTAKGMALFGEGKAEFTGRHDAHLNGKVIGTLKNSLFFSAQPFEITASTNNEGNLKVRF 3060
VLTAKGMALFGEGKAEFTGRHDAHLNGKVIGTLKNSLFFSAQPFEITASTNNEGNLKVRF
Sbjct: 3001 VLTAKGMALFGEGKAEFTGRHDAHLNGKVIGTLKNSLFFSAQPFEITASTNNEGNLKVRF 3060
Query: 3061 PLRLTGKIDFLNNYALFLSPSAQQASWQVSARFNQYKYNQNFSAGNNENIMEAHVGINGE 3120
PLRLTGKIDFLNNYALFLSPSAQQASWQVSARFNQYKYNQNFSAGNNENIMEAHVGINGE
Sbjct: 3061 PLRLTGKIDFLNNYALFLSPSAQQASWQVSARFNQYKYNQNFSAGNNENIMEAHVGINGE 3120
Query: 3121 ANLDFLNIPLTIPEMRLPYTIITTPPLKDFSLWEKTGLKEFLKTTKQSFDLSVKAQYKKN 3180
ANLDFLNIPLTIPEMRLPYTIITTPPLKDFSLWEKTGLKEFLKTTKQSFDLSVKAQYKKN
Sbjct: 3121 ANLDFLNIPLTIPEMRLPYTIITTPPLKDFSLWEKTGLKEFLKTTKQSFDLSVKAQYKKN 3180
Query: 3181 KHRHSITNPLAVLCEFISQSIKSFDRHFEKNRNNALDFVTKSYNETKIKFDKYKAEKSHD 3240
KHRHSITNPLAVLCEFISQSIKSFDRHFEKNRNNALDFVTKSYNETKIKFDKYKAEKSHD
Sbjct: 3181 KHRHSITNPLAVLCEFISQSIKSFDRHFEKNRNNALDFVTKSYNETKIKFDKYKAEKSHD 3240
Query: 3241 ELPRTFQIPGYTVPVVNVEVSPFTIEMSAFGYVFPKAVSMPSFSILGSDVRVPSYTLILP 3300
ELPRTFQIPGYTVPVVNVEVSPFTIEMSAFGYVFPKAVSMPSFSILGSDVRVPSYTLILP
Sbjct: 3241 ELPRTFQIPGYTVPVVNVEVSPFTIEMSAFGYVFPKAVSMPSFSILGSDVRVPSYTLILP 3300
Query: 3301 SLELPVLHVPRNLKLSLPDFKELCTISHIFIPAMGNITYDFSFKSSVITLNTNAELFNQS 3360
SLELPVLHVPRNLKLSLPDFKELCTISHIFIPAMGNITYDFSFKSSVITLNTNAELFNQS
Sbjct: 3301 SLELPVLHVPRNLKLSLPDFKELCTISHIFIPAMGNITYDFSFKSSVITLNTNAELFNQS 3360
Query: 3361 DIVAHLLSSSSSVIDALQYKLEGTTRLTRKRGLKLATALSLSNKFVEGSHNSTVSLTTKN 3420
DIVAHLLSSSSSVIDALQYKLEGTTRLTRKRGLKLATALSLSNKFVEGSHNSTVSLTTKN
Sbjct: 3361 DIVAHLLSSSSSVIDALQYKLEGTTRLTRKRGLKLATALSLSNKFVEGSHNSTVSLTTKN 3420
Query: 3421 MEVSVATTTKAQIPILRMNFKQELNGNTKSKPTVSSSMEFKYDFNSSMLYSTAKGAVDHK 3480
MEVSVATTTKAQIPILRMNFKQELNGNTKSKPTVSSSMEFKYDFNSSMLYSTAKGAVDHK
Sbjct: 3421 MEVSVATTTKAQIPILRMNFKQELNGNTKSKPTVSSSMEFKYDFNSSMLYSTAKGAVDHK 3480
Query: 3481 LSLESLTSYFSIESSTKGDVKGSVLSREYSGTIASEANTYLNSKSTRSSVKLQGTSKIDD 3540
LSLESLTSYFSIESSTKGDVKGSVLSREYSGTIASEANTYLNSKSTRSSVKLQGTSKIDD
Sbjct: 3481 LSLESLTSYFSIESSTKGDVKGSVLSREYSGTIASEANTYLNSKSTRSSVKLQGTSKIDD 3540
Query: 3541 IWNLEVKENFAGEATLQRIYSLWEHSTKNHLQLEGLFFTNGEHTSKATLELSPWQMSALV 3600
IWNLEVKENFAGEATLQRIYSLWEHSTKNHLQLEGLFFTNGEHTSKATLELSPWQMSALV
Sbjct: 3541 IWNLEVKENFAGEATLQRIYSLWEHSTKNHLQLEGLFFTNGEHTSKATLELSPWQMSALV 3600
Query: 3601 QVHASQPSSFHDFPDLGQEVALNANTKNQKIRWKNEVRIHSGSFQSQVELSNDQEKAHLD 3660
QVHASQPSSFHDFPDLGQEVALNANTKNQKIRWKNEVRIHSGSFQSQVELSNDQEKAHLD
Sbjct: 3601 QVHASQPSSFHDFPDLGQEVALNANTKNQKIRWKNEVRIHSGSFQSQVELSNDQEKAHLD 3660
Query: 3661 IAGSLEGHLRFLKNIILPVYDKSLWDFLKLDVTTSIGRRQHLRVSTAFVYTKNPNGYSFS 3720
IAGSLEGHLRFLKNIILPVYDKSLWDFLKLDVTTSIGRRQHLRVSTAFVYTKNPNGYSFS
Sbjct: 3661 IAGSLEGHLRFLKNIILPVYDKSLWDFLKLDVTTSIGRRQHLRVSTAFVYTKNPNGYSFS 3720
Query: 3721 IPVKVLADKFIIPGLKLNDLNSVLVMPTFHVPFTDLQVPSCKLDFREIQIYKKLRTSSFA 3780
IPVKVLADKFIIPGLKLNDLNSVLVMPTFHVPFTDLQVPSCKLDFREIQIYKKLRTSSFA
Sbjct: 3721 IPVKVLADKFIIPGLKLNDLNSVLVMPTFHVPFTDLQVPSCKLDFREIQIYKKLRTSSFA 3780
Query: 3781 LNLPTLPEVKFPEVDVLTKYSQPEDSLIPFFEITVPESQLTVSQFTLPKSVSDGIAALDL 3840
LNLPTLPEVKFPEVDVLTKYSQPEDSLIPFFEITVPESQLTVSQFTLPKSVSDGIAALDL
Sbjct: 3781 LNLPTLPEVKFPEVDVLTKYSQPEDSLIPFFEITVPESQLTVSQFTLPKSVSDGIAALDL 3840
Query: 3841 NAVANKIADFELPTIIVPEQTIEIPSIKFSVPAGIVIPSFQALTARFEVDSPVYNATWSA 3900
NAVANKIADFELPTIIVPEQTIEIPSIKFSVPAGIVIPSFQALTARFEVDSPVYNATWSA
Sbjct: 3841 NAVANKIADFELPTIIVPEQTIEIPSIKFSVPAGIVIPSFQALTARFEVDSPVYNATWSA 3900
Query: 3901 SLKNKADYVETVLDSTCSSTVQFLEYELNVLGTHKIEDGTLASKTKGTFAHRDFSAEYEE 3960
SLKNKADYVETVLDSTCSSTVQFLEYELNVLGTHKIEDGTLASKTKGTFAHRDFSAEYEE
Sbjct: 3901 SLKNKADYVETVLDSTCSSTVQFLEYELNVLGTHKIEDGTLASKTKGTFAHRDFSAEYEE 3960
Query: 3961 DGKYEGLQEWEGKAHLNIKSPAFTDLHLRYQKDKKGISTSAASPAVGTVGMDMDEDDDFS 4020
DGKYEGLQEWEGKAHLNIKSPAFTDLHLRYQKDKKGISTSAASPAVGTVGMDMDEDDDFS
Sbjct: 3961 DGKYEGLQEWEGKAHLNIKSPAFTDLHLRYQKDKKGISTSAASPAVGTVGMDMDEDDDFS 4020
Query: 4021 KWNFYYSPQSSPDKKLTIFKTELRVRESDEETQIKVNWEEEAASGLLTSLKDNVPKATGV 4080
KWNFYYSPQSSPDKKLTIFKTELRVRESDEETQIKVNWEEEAASGLLTSLKDNVPKATGV
Sbjct: 4021 KWNFYYSPQSSPDKKLTIFKTELRVRESDEETQIKVNWEEEAASGLLTSLKDNVPKATGV 4080
Query: 4081 LYDYVNKYHWEHTGLTLREVSSKLRRNLQNNAEWVYQGAIRQIDDIDVRFQKAASGTTGT 4140
LYDYVNKYHWEHTGLTLREVSSKLRRNLQNNAEWVYQGAIRQIDDIDVRFQKAASGTTGT
Sbjct: 4081 LYDYVNKYHWEHTGLTLREVSSKLRRNLQNNAEWVYQGAIRQIDDIDVRFQKAASGTTGT 4140
Query: 4141 YQEWKDKAQNLYQELLTQEGQASFQGLKDNVFDGLVRVTQEFHMKVKHLIDSLIDFLNFP 4200
YQEWKDKAQNLYQELLTQEGQASFQGLKDNVFDGLVRVTQEFHMKVKHLIDSLIDFLNFP
Sbjct: 4141 YQEWKDKAQNLYQELLTQEGQASFQGLKDNVFDGLVRVTQEFHMKVKHLIDSLIDFLNFP 4200
Query: 4201 RFQFPGKPGIYTREELCTMFIREVGTVLSQVYSKVHNGSEILFSYFQDLVITLPFELRKH 4260
RFQFPGKPGIYTREELCTMFIREVGTVLSQVYSKVHNGSEILFSYFQDLVITLPFELRKH
Sbjct: 4201 RFQFPGKPGIYTREELCTMFIREVGTVLSQVYSKVHNGSEILFSYFQDLVITLPFELRKH 4260
Query: 4261 KLIDVISMYRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQLIEDNIKQLKEM 4320
KLIDVISMYRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQLIEDNIKQLKEM
Sbjct: 4261 KLIDVISMYRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQLIEDNIKQLKEM 4320
Query: 4321 KFTYLINYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIHQY 4380
KFTYLINYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIHQY
Sbjct: 4321 KFTYLINYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIHQY 4380
Query: 4381 IMALREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTSQLSSQV 4440
IMALREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTSQLSSQV
Sbjct: 4381 IMALREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTSQLSSQV 4440
Query: 4441 EQFLHRNIQEYLSILTDPDGKGKEKIAELSATAQEIIKSQAIATKKIISDYHQQFRYKLQ 4500
EQFLHRNIQEYLSILTDPDGKGKEKIAELSATAQEIIKSQAIATKKIISDYHQQFRYKLQ
Sbjct: 4441 EQFLHRNIQEYLSILTDPDGKGKEKIAELSATAQEIIKSQAIATKKIISDYHQQFRYKLQ 4500
Query: 4501 DFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYITELLKKLQSTTVMNPYMKLAPGELT 4560
DFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYITELLKKLQSTTVMNPYMKLAPGELT
Sbjct: 4501 DFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYITELLKKLQSTTVMNPYMKLAPGELT 4560
Query: 4561 IIL 4563
IIL
Sbjct: 4561 IIL 4563
>gi|116686120 periaxin isoform 2 [Homo sapiens]
Length = 1461
Score = 56.6 bits (135), Expect = 5e-07
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 31/177 (17%)
Query: 2587 VPEIKTILGTMPAFEVSLQALQKATFQTPDFIVPLTDL-RIPSVQINFKDLKNIKIPSRF 2645
VPE+K L M EV L + + PD +P L ++P +++ L +K+P
Sbjct: 590 VPEMK--LPEMKLPEVQLPKVPEMA--VPDVHLPEVQLPKVPEMKLPEMKLPEVKLPK-- 643
Query: 2646 STPEFTILNTFHIPSFTIDFV---------EMKVKIIRTIDQMLN--SELQWP-VPDIYL 2693
PE + + H+P + V EM V +R + L SE++ P VP++ +
Sbjct: 644 -VPEMAVPDV-HLPEVQLPKVPEMKLPKMPEMAVPEVRLPEVQLPKVSEMKLPKVPEMAV 701
Query: 2694 RDLKVEDIPLARIT---LPDFRLPEIAIPEFIIPTLNLNDFQVPDLHIPEFQLPHIS 2747
D+ + ++ L ++ +PD +LPEI +P+ + + VPD+H+PE QLP +S
Sbjct: 702 PDVHLPEVQLPKVCEMKVPDMKLPEIKLPK-------VPEMAVPDVHLPEVQLPKVS 751
Score = 50.8 bits (120), Expect = 3e-05
Identities = 48/170 (28%), Positives = 90/170 (52%), Gaps = 26/170 (15%)
Query: 2587 VPEIKTILGTMPAFEVSLQALQKATFQTPDFIVPLTDLRIPSVQI-NFKDLKNIKIPSRF 2645
VPE++ +P +VS L K P+ VP ++R+P VQ+ ++K K+P
Sbjct: 486 VPEVRLPEVELP--KVSEMKLPKV----PEMAVP--EVRLPEVQLLKVSEMKLPKVPE-M 536
Query: 2646 STPEFTILNTFHIPSFTIDFVEMKVKIIR--TIDQMLNSELQWP-VPDIYLRDLKVEDIP 2702
+ PE L +P + EMK+ + + ++ E+Q P VP++ + ++K+ +P
Sbjct: 537 AVPEVR-LPEVQLPKVS----EMKLPEVSEVAVPEVRLPEVQLPKVPEMKVPEMKLPKVP 591
Query: 2703 ---LARITLPDFRLPEIAIPEFIIPTLNLNDFQ---VPDLHIPEFQLPHI 2746
L + LP+ +LP+ +PE +P ++L + Q VP++ +PE +LP +
Sbjct: 592 EMKLPEMKLPEVQLPK--VPEMAVPDVHLPEVQLPKVPEMKLPEMKLPEV 639
Score = 47.4 bits (111), Expect = 3e-04
Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 29/184 (15%)
Query: 2584 GFTVPEIKTILGTMPAFEVSLQALQKATF-QTPDFIVPLTDLRIPSVQI-NFKDLKNIKI 2641
G + PE+K G EV L + + P+ +P ++R+P V++ ++K K+
Sbjct: 428 GVSGPEVKVPKGP----EVKLPKAPEVKLPKVPEAALP--EVRLPEVELPKVSEMKLPKV 481
Query: 2642 PS---------RFSTPEFTILNTFHIPSFTIDFVEM-KVKIIRTIDQMLNSELQWPVPDI 2691
P P+ + + +P + V + +V++++ + L + VP++
Sbjct: 482 PEMAVPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEVQLLKVSEMKLPKVPEMAVPEV 541
Query: 2692 YLRDL---KVEDIPL---ARITLPDFRLPEIA---IPEFIIPTLNLNDFQVPDLHIPEFQ 2742
L ++ KV ++ L + + +P+ RLPE+ +PE +P + L +VP++ +PE +
Sbjct: 542 RLPEVQLPKVSEMKLPEVSEVAVPEVRLPEVQLPKVPEMKVPEMKLP--KVPEMKLPEMK 599
Query: 2743 LPHI 2746
LP +
Sbjct: 600 LPEV 603
Score = 46.2 bits (108), Expect = 7e-04
Identities = 43/199 (21%), Positives = 98/199 (49%), Gaps = 23/199 (11%)
Query: 2580 LVEQGFTVPEIKTILGTMPAFEVSLQALQKATFQTPDFIVPLT-DLRIPSVQINFKDLKN 2638
+VE +P IK MP+ + + + + P+ +P ++++P V L
Sbjct: 410 VVESKLKLPTIK-----MPSLGIGVSGPEVKVPKGPEVKLPKAPEVKLPKVPE--AALPE 462
Query: 2639 IKIPSRFSTPEFTILNTFHIPSFTIDFVEM-KVKIIRTIDQMLNSELQWPVPDIYLRD-- 2695
+++P P+ + + +P + V + +V++ + + L + VP++ L +
Sbjct: 463 VRLPE-VELPKVSEMKLPKVPEMAVPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEVQ 521
Query: 2696 -LKVEDIPLARITLPDFRLPEIAIPEFIIPTLN------LNDFQVPDLHIPEFQLPHISH 2748
LKV ++ L ++ P+ +PE+ +PE +P ++ +++ VP++ +PE QLP +
Sbjct: 522 LLKVSEMKLPKV--PEMAVPEVRLPEVQLPKVSEMKLPEVSEVAVPEVRLPEVQLPKVPE 579
Query: 2749 TIEVPTFGKLYSILKIQSP 2767
++VP KL + +++ P
Sbjct: 580 -MKVPEM-KLPKVPEMKLP 596
Score = 44.3 bits (103), Expect = 0.003
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 2597 MPAFEVSLQALQKATFQTPDFIVPLTDLRIPSVQINFKDLKNIKIPS--RFSTPEFTILN 2654
MP F +SL + A + + + L +++PS+ I +K+P P+ +
Sbjct: 393 MPTFGLSLLEPRPAAPEVVESKLKLPTIKMPSLGIGVSG-PEVKVPKGPEVKLPKAPEVK 451
Query: 2655 TFHIPSFTIDFVEM-KVKIIRTIDQMLNSELQWPVPDIYLRDLKVEDIPLARITLPDFRL 2713
+P + V + +V++ + + L + VP++ L ++++ + + + LP ++
Sbjct: 452 LPKVPEAALPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEVELPKV--SEMKLP--KV 507
Query: 2714 PEIAIPEFIIPTLNL-----------NDFQVPDLHIPEFQLPHIS 2747
PE+A+PE +P + L + VP++ +PE QLP +S
Sbjct: 508 PEMAVPEVRLPEVQLLKVSEMKLPKVPEMAVPEVRLPEVQLPKVS 552
Score = 41.2 bits (95), Expect = 0.024
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 31/134 (23%)
Query: 2615 PDFIVPLTDLRIPSVQINFKDLKNIKIPSRFSTPEFTILNTFHIPSFTIDFV-EMKVKII 2673
P+ VP ++R+P VQ+ + +K+P PE + + H+P + V EMKV +
Sbjct: 671 PEMAVP--EVRLPEVQL--PKVSEMKLPK---VPEMAVPDV-HLPEVQLPKVCEMKVPDM 722
Query: 2674 RTIDQMLNSELQWPVPDIYLRDLKVEDIPLARITLPDFRLPEIAIPEFIIPTLNLNDFQV 2733
+ + L + VPD++L ++++ + + RLPE+ +P +V
Sbjct: 723 KLPEIKLPKVPEMAVPDVHLPEVQLPKV-------SEIRLPEMQVP------------KV 763
Query: 2734 PDLHI---PEFQLP 2744
PD+H+ PE +LP
Sbjct: 764 PDVHLPKAPEVKLP 777
Score = 37.0 bits (84), Expect = 0.45
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 3732 IPGLKLNDLNSVLVMPTFHVPFTDLQVPSCKLDFREIQIYKKLRTSSFALNLPTLPEVKF 3791
+P ++L ++ V +++ VP +L E+Q+ K + LP +PE+K
Sbjct: 538 VPEVRLPEVQLPKVSEMKLPEVSEVAVPEVRLP--EVQLPKVPEMKVPEMKLPKVPEMKL 595
Query: 3792 PEVDVLTKYSQPEDSLIPFFEITVPESQLTVSQFTLPKSVSDGIAALDLNAV-ANKIADF 3850
PE+ + PE L E+ VP+ L Q LPK + + L V K+ +
Sbjct: 596 PEMKL------PEVQLPKVPEMAVPDVHLPEVQ--LPKVPEMKLPEMKLPEVKLPKVPEM 647
Query: 3851 ELPTIIVPE-QTIEIPSIKFSVPAGIVIP 3878
+P + +PE Q ++P +K + +P
Sbjct: 648 AVPDVHLPEVQLPKVPEMKLPKMPEMAVP 676
Score = 35.0 bits (79), Expect = 1.7
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 3740 LNSVLVMPTFHVPFTDLQV--PSCKLDFR-EIQIYKKLRTSSFALNLPTLPEVKFPEVDV 3796
+ S L +PT +P + V P K+ E+++ K + LPEV+ PEV+
Sbjct: 411 VESKLKLPTIKMPSLGIGVSGPEVKVPKGPEVKLPKAPEVKLPKVPEAALPEVRLPEVE- 469
Query: 3797 LTKYSQPEDSLIPFFEITVPESQL------TVSQFTLPKSVSDGIAALDLNAV-ANKIAD 3849
L K S+ + +P E+ VPE +L VS+ LPK + + L V K+++
Sbjct: 470 LPKVSEMKLPKVP--EMAVPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEVQLLKVSE 527
Query: 3850 FELPTI---IVPEQTIEIPSIKFSVPAGIVIP 3878
+LP + VPE + +P ++ + + +P
Sbjct: 528 MKLPKVPEMAVPE--VRLPEVQLPKVSEMKLP 557
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 47.0 bits (110), Expect = 4e-04
Identities = 70/363 (19%), Positives = 157/363 (43%), Gaps = 44/363 (12%)
Query: 2124 DYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQ 2183
D +SF H ++L A ++ R N++++ L + ++++ Q +Q +
Sbjct: 265 DANSSFFDNSSSPHLLDQLKAQNQELRNKINELELRLQGHEKEMKGQVNKFQELQLQLE- 323
Query: 2184 YIKDSYDLHDLKIAIANIIDEIIEKLKSLDE----HYHIRVNLVKTIHDLHLFIENIDFN 2239
K +L + + + DE++ D+ + + L K DL +N +
Sbjct: 324 --KAKVELIEKEKVLNKCRDELVRTTAQYDQASTKYTALEQKLKKLTEDLSCQRQNAE-- 379
Query: 2240 KSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQ--HLAGKLKQHIEAID---- 2293
S+ S Q + K + + QE+L + +R Q +D + + +L Q ++
Sbjct: 380 ---SARCSLEQKIKEKEK---EFQEELSRQQRSFQTLDQECIQMKARLTQELQQAKNMHN 433
Query: 2294 -VRVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAE-KINAFRAKVHELIERYEV- 2350
++ LD+L T +++ + LE K + F+ ++ K N R + E+ + +
Sbjct: 434 VLQAELDKL--TSVKQQLENNLEEFKQKLCRAEQAFQASQIKENELRRSMEEMKKENNLL 491
Query: 2351 ----DQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNE 2406
+Q+ + + EL + +K+ + + N +++K K+ ++ + + D +K+N+
Sbjct: 492 KSHSEQKAREVCHLEAELKN---IKQCLNQSQNFAEEMKAKNTSQETM--LRDLQEKINQ 546
Query: 2407 LS-------FKTFIEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALEL 2459
K + D+ K D LK ++H +++ NDK+ + + + ALEL
Sbjct: 547 QENSLTLEKLKLAVADLEKQRDCSQDLLKKREHH--IEQLNDKLSKTEKESKALLSALEL 604
Query: 2460 PQK 2462
+K
Sbjct: 605 KKK 607
Score = 40.8 bits (94), Expect = 0.031
Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 28/292 (9%)
Query: 2140 EKLTALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIA 2199
EK+ T++ +++ + A+ EK LQT + +KD L + K+
Sbjct: 1982 EKMKEKTQELESHQSECLHCIQVAEAEVKEKTELLQTLSSDVSELLKDKTHLQE-KLQSL 2040
Query: 2200 NIIDEIIEKLKSLDEHYHIRVN-----LVKTIHDLHLFIENIDFNKSGSSTASWIQNVDT 2254
+ + K E+ ++N LVK L + D+ K S A V+
Sbjct: 2041 EKDSQALSLTKCELENQIAQLNKEKELLVKESESLQARLSESDYEKLNVSKALEAALVEK 2100
Query: 2255 -KYQIRI-QIQEKLQQLKRHIQNIDIQ---------HLAGKLKQHIEAID-VRVLLDQLG 2302
++ +R+ QE++ QL+R I+ + ++ H+A KLK+ D ++ ++ L
Sbjct: 2101 GEFALRLSSTQEEVHQLRRGIEKLRVRIEADEKKQLHIAEKLKERERENDSLKDKVENLE 2160
Query: 2303 TTISFERINDVL-----EHVKHFVINLIGDF-EVAEKINAFRAKVHELIERYEVDQQIQV 2356
+ N L E+ K V L E+A + F + L R E + +
Sbjct: 2161 RELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFELDLVTL--RSEKENLTKQ 2218
Query: 2357 LMDKLVELAHQYKLKETIQKLSNVLQQ--VKIKDYFEKLVGFIDDAVKKLNE 2406
+ +K +L+ KL + + L +Q ++IK+ + V + + +K+LNE
Sbjct: 2219 IQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNE 2270
Score = 33.1 bits (74), Expect = 6.5
Identities = 70/376 (18%), Positives = 157/376 (41%), Gaps = 41/376 (10%)
Query: 2132 ERQVSHAKEKLTALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIK-DSYD 2190
ER+ K+K+ L ++ +++E + ++ + DA+ N ++ L+T + + + +K D
Sbjct: 2146 ERENDSLKDKVENLERELQMSEENQELVILDAE-NSKAEVETLKTQIEEMARSLKVFELD 2204
Query: 2191 LHDLKIAIANIIDEIIEKLKSLDEHYHIRVNLVKTIHDLHLFIE-----NIDFNKSGSST 2245
L L+ N+ +I EK L E L K + +E I + +
Sbjct: 2205 LVTLRSEKENLTKQIQEKQGQLSE-------LDKLLSSFKSLLEEKEQAEIQIKEESKTA 2257
Query: 2246 ASWIQNVDTKYQIRIQI----QEKLQQLKRHIQ-NIDIQHLAGKLKQHIEAIDVRVLLDQ 2300
+QN + + QE ++ ++ + I+ +H +L+ IE + R+ D+
Sbjct: 2258 VEMLQNQLKELNEAVAALCGDQEIMKATEQSLDPPIEEEH---QLRNSIEKLRARLEADE 2314
Query: 2301 LGTTISFERINDVLEH---VKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVL 2357
+++ + H +K V NL + E+A + H +E +++ L
Sbjct: 2315 KKQLCVLQQLKESEHHADLLKGRVENLERELEIAR-----TNQEHAALEAENSKGEVETL 2369
Query: 2358 MDKLVELAHQYK--------LKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSF 2409
K+ + + ++ + L+N LQ+ + + +++ + + + E
Sbjct: 2370 KAKIEGMTQSLRGLELDVVTIRSEKENLTNELQKEQERISELEIINSSFENILQEKEQEK 2429
Query: 2410 KTFIEDVNKFLDMLIKKLKSFDYH-QFVDETNDKIREVTQRLNGEIQALELPQKAEALKL 2468
E + ++ML +LK + + + + Q L+ +++ LEL +KA+ L+
Sbjct: 2430 VQMKEKSSTAMEMLQTQLKELNERVAALHNDQEACKAKEQNLSSQVECLEL-EKAQLLQ- 2487
Query: 2469 FLEETKATVAVYLESL 2484
L+E K V S+
Sbjct: 2488 GLDEAKNNYIVLQSSV 2503
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 46.6 bits (109), Expect = 6e-04
Identities = 66/302 (21%), Positives = 142/302 (47%), Gaps = 47/302 (15%)
Query: 2249 IQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFE 2308
+Q ++ + Q QIQE+ + L R + + + AG ++Q + +++ ++L E
Sbjct: 1959 LQELEAEQQ---QIQEERELLSRQKEAMKAE--AGPVEQQLLQETEKLMKEKLEVQCQAE 2013
Query: 2309 RINDVLE-HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKL------ 2361
++ D L+ VK I++ + +V+ I + K EL++ + +Q ++ ++K+
Sbjct: 2014 KVRDDLQKQVKALEIDV--EEQVSRFIELEQEKNTELMDLRQQNQALEKQLEKMRKFLDE 2071
Query: 2362 --VELAHQYKL-KETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKL-NELSFKTFIEDVN 2417
++ H+ + ++ IQKL QQ+K+ F+ + V++L N L KT +
Sbjct: 2072 QAIDREHERDVFQQEIQKLE---QQLKVVPRFQPISEHQTREVEQLANHLKEKT-----D 2123
Query: 2418 KFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELPQKAEALKLFLEETKATV 2477
K ++L+ K ++++ Q N EI+ LE + L +E+ K
Sbjct: 2124 KCSELLLSK--------------EQLQRDIQERNEEIEKLEFRVRELEQALLVEDRKHFG 2169
Query: 2478 AVYLESLQDTKITLIINWLQEALSS-----ASLAHMKAKFRETLEDTRDRMYQMDIQQEL 2532
AV E+ + + + + ++A+ +L +FRE LE+ + + Q+ +Q E+
Sbjct: 2170 AV--EAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEI 2227
Query: 2533 QR 2534
Q+
Sbjct: 2228 QK 2229
Score = 35.0 bits (79), Expect = 1.7
Identities = 64/412 (15%), Positives = 164/412 (39%), Gaps = 40/412 (9%)
Query: 2028 LLLSEPINIIDALEMRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQT 2087
LL E + D+ + A + P ++ K ++ +N E Y Q
Sbjct: 133 LLREEEFGVDDSYSEQGAQDSPTHLEMMESELAGKQHEIEELNRELEEMRVTYGTEGLQQ 192
Query: 2088 IIVVLENVQRNLKHINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTK 2147
L+ + +K D + + A L + ++ ++ + F +++ +KL +
Sbjct: 193 ----LQEFEAAIKQR--DGIITQLTANLQQARREKDETMREF---LELTEQSQKLQIQFQ 243
Query: 2148 KYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIE 2207
+ + +E + + Q+ T+ Q ++ D K I + E
Sbjct: 244 QLQASETLRNSTHSSTAADLLQAKQQILTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQE 303
Query: 2208 KLK--SLDEHYHIRVNLVKTIHDLHLFIENIDFN--KSGSSTASWIQNVDTKYQIRIQIQ 2263
K+K +++ + + + I + IE ++ + T + T ++ ++Q
Sbjct: 304 KIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTTADKLLGELQ 363
Query: 2264 EKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLEHVKHFVIN 2323
E++ Q + I+N+ ++ K K+ + +++ L +GT ++ N + ++
Sbjct: 364 EQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQL---MGTVEELQKRNHKDSQFETDIVQ 420
Query: 2324 LIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVEL-----AHQYKLKETIQKLS 2378
+ + E K+ RA++ E+ + V + +++ + ++ H+ +++ ++ S
Sbjct: 421 RM-EQETQRKLEQLRAELDEMYGQQIVQMKQELIRQHMAQMEEMKTRHKGEMENALRSYS 479
Query: 2379 NVL---QQVKIKDYFEKLVGFIDDAVKKLNELSFKTFIEDVNKFLDMLIKKL 2427
N+ Q+K+ + +NEL+ K ++D N + L ++L
Sbjct: 480 NITVNEDQIKLMNV-------------AINELNIK--LQDTNSQKEKLKEEL 516
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 46.2 bits (108), Expect = 7e-04
Identities = 78/383 (20%), Positives = 183/383 (47%), Gaps = 66/383 (17%)
Query: 2139 KEKLTALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDL----HDL 2194
K++L+ T+KY ++E +++ + N+KL + + + +Q D ++D L H++
Sbjct: 993 KDQLSEQTQKYSVSEEEVKKNKQE-----NDKLKK-EIFTLQKD--LRDKTVLIEKSHEM 1044
Query: 2195 KIAIANIIDEIIEKLKSLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDT 2254
+ A++ DE+ ++LK L + Y VK + + + ++ N +S +QN+
Sbjct: 1045 ERALSRKTDELNKQLKDLSQKY----TEVKNVKE-----KLVEENAKQTSEILAVQNLLQ 1095
Query: 2255 KYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVL 2314
K + + E+++ LK+ + N I++L +LK ++ ++ T++ +++ +L
Sbjct: 1096 KQHVPL---EQVEALKKSL-NGTIENLKEELK------SMQRCYEKEQQTVT--KLHQLL 1143
Query: 2315 EHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETI 2374
E+ K+ + L ++ E AF +V I + + ++ + +K+ E++ KL+ +
Sbjct: 1144 ENQKNSSVPLAEHLQIKE---AFEKEVG--IIKASLREKEEESQNKMEEVS---KLQSEV 1195
Query: 2375 QKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSFKTFIEDVNKFLDMLIKKLKSFDYHQ 2434
Q L++++ ++ +D + K + +T I +N+ L L +K Y +
Sbjct: 1196 QNTKQALKKLETRE-------VVDLSKYKATKSDLETQISSLNEKLANLNRK-----YEE 1243
Query: 2435 FVDET-NDKIREVTQRLNGEIQALELPQKAEALKLFLEETKATVAVYLESLQ-------- 2485
+E + K +E++ + E+ + Q+ + K +++ T+ +Q
Sbjct: 1244 VCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEA 1303
Query: 2486 -DTKITLIIN---WLQEALSSAS 2504
D KIT ++N L++AL+ S
Sbjct: 1304 KDNKITELLNDVERLKQALNGLS 1326
Score = 36.6 bits (83), Expect = 0.59
Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 25/252 (9%)
Query: 2042 MRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVL----ENVQR 2097
M+ EK Q+ T+ + +NQ S+ L ++E FE+ I L E Q
Sbjct: 1125 MQRCYEKEQQ-TVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQN 1183
Query: 2098 NLKHIN-IDQFVRKYRAALGKLPQQANDYLNSF-----NWERQVSHAKEKLTALTKKYRI 2151
++ ++ + V+ + AL KL + L+ + + E Q+S EKL L +KY
Sbjct: 1184 KMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKY-- 1241
Query: 2152 TENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKI-AIANIIDEIIEKLK 2210
E + L K + K + + +Q IKD + D + I + I E K
Sbjct: 1242 -EEVCEEVLHAKKKEISAK-DEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAK 1299
Query: 2211 SLDEHYHIRVNLVKTIHDLHLFIENID--FNKSGSSTASWIQNVDTKYQIRIQIQEKLQQ 2268
++ + L+ + L + + SG+ T Q +DT +Q +++
Sbjct: 1300 QIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDT-------LQHQVKS 1352
Query: 2269 LKRHIQNIDIQH 2280
L++ + + D QH
Sbjct: 1353 LEQQLADADRQH 1364
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 46.2 bits (108), Expect = 7e-04
Identities = 78/383 (20%), Positives = 183/383 (47%), Gaps = 66/383 (17%)
Query: 2139 KEKLTALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDL----HDL 2194
K++L+ T+KY ++E +++ + N+KL + + + +Q D ++D L H++
Sbjct: 1006 KDQLSEQTQKYSVSEEEVKKNKQE-----NDKLKK-EIFTLQKD--LRDKTVLIEKSHEM 1057
Query: 2195 KIAIANIIDEIIEKLKSLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDT 2254
+ A++ DE+ ++LK L + Y VK + + + ++ N +S +QN+
Sbjct: 1058 ERALSRKTDELNKQLKDLSQKY----TEVKNVKE-----KLVEENAKQTSEILAVQNLLQ 1108
Query: 2255 KYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVL 2314
K + + E+++ LK+ + N I++L +LK ++ ++ T++ +++ +L
Sbjct: 1109 KQHVPL---EQVEALKKSL-NGTIENLKEELK------SMQRCYEKEQQTVT--KLHQLL 1156
Query: 2315 EHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETI 2374
E+ K+ + L ++ E AF +V I + + ++ + +K+ E++ KL+ +
Sbjct: 1157 ENQKNSSVPLAEHLQIKE---AFEKEVG--IIKASLREKEEESQNKMEEVS---KLQSEV 1208
Query: 2375 QKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSFKTFIEDVNKFLDMLIKKLKSFDYHQ 2434
Q L++++ ++ +D + K + +T I +N+ L L +K Y +
Sbjct: 1209 QNTKQALKKLETRE-------VVDLSKYKATKSDLETQISSLNEKLANLNRK-----YEE 1256
Query: 2435 FVDET-NDKIREVTQRLNGEIQALELPQKAEALKLFLEETKATVAVYLESLQ-------- 2485
+E + K +E++ + E+ + Q+ + K +++ T+ +Q
Sbjct: 1257 VCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEA 1316
Query: 2486 -DTKITLIIN---WLQEALSSAS 2504
D KIT ++N L++AL+ S
Sbjct: 1317 KDNKITELLNDVERLKQALNGLS 1339
Score = 36.6 bits (83), Expect = 0.59
Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 25/252 (9%)
Query: 2042 MRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVL----ENVQR 2097
M+ EK Q+ T+ + +NQ S+ L ++E FE+ I L E Q
Sbjct: 1138 MQRCYEKEQQ-TVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQN 1196
Query: 2098 NLKHIN-IDQFVRKYRAALGKLPQQANDYLNSF-----NWERQVSHAKEKLTALTKKYRI 2151
++ ++ + V+ + AL KL + L+ + + E Q+S EKL L +KY
Sbjct: 1197 KMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKY-- 1254
Query: 2152 TENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKI-AIANIIDEIIEKLK 2210
E + L K + K + + +Q IKD + D + I + I E K
Sbjct: 1255 -EEVCEEVLHAKKKEISAK-DEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAK 1312
Query: 2211 SLDEHYHIRVNLVKTIHDLHLFIENID--FNKSGSSTASWIQNVDTKYQIRIQIQEKLQQ 2268
++ + L+ + L + + SG+ T Q +DT +Q +++
Sbjct: 1313 QIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDT-------LQHQVKS 1365
Query: 2269 LKRHIQNIDIQH 2280
L++ + + D QH
Sbjct: 1366 LEQQLADADRQH 1377
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 46.2 bits (108), Expect = 7e-04
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 28/281 (9%)
Query: 2257 QIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVL-LDQLGTTISFERINDVLE 2315
Q + ++E+L++ + Q + ++ + + K I+ ++ +L +D +S ER + E
Sbjct: 950 QQMLDLEEQLEEEEAARQKLQLEKVTAEAK--IKKLEDEILVMDDQNNKLSKER-KLLEE 1006
Query: 2316 HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQ 2375
+ NL + E A+ + + K +I EV L + K ++ ++
Sbjct: 1007 RISDLTTNLAEEEEKAKNLTKLKNKHESMISELEV------------RLKKEEKSRQELE 1054
Query: 2376 KLSNVLQ------QVKIKDYFEKLVGFIDDAVKKLNELSFKTF-IEDVNKFLDMLIKKLK 2428
KL L+ +I D ++ KK EL ++D + +KK++
Sbjct: 1055 KLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIR 1114
Query: 2429 SFDYHQFVDETNDKIREVTQRLNGEIQALELPQKAEALKLFLEETKATVAVY--LESLQD 2486
+ H D D E R E Q +L ++ EALK LE+T + A L + ++
Sbjct: 1115 ELEGH-ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKRE 1173
Query: 2487 TKITLIINWLQEALSS--ASLAHMKAKFRETLEDTRDRMYQ 2525
++T++ L E S A + M+ K + +E+ +++ Q
Sbjct: 1174 QEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQ 1214
Score = 43.1 bits (100), Expect = 0.006
Identities = 95/452 (21%), Positives = 191/452 (42%), Gaps = 81/452 (17%)
Query: 2140 EKLTALTKKYR--ITENDIQIALDDAKINFNEKLSQ-LQTYMIQFDQYIKD-SYDLHDLK 2195
+ LT L K+ I+E ++++ ++ EKL + L+ F + I D + +LK
Sbjct: 1023 KNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELK 1082
Query: 2196 IAIANIIDEIIEKLKSLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTK 2255
+ +A +E+ L LD+ + N +K I +L I ++ +++D++
Sbjct: 1083 MQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQ------------EDLDSE 1130
Query: 2256 YQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLE 2315
R + +++ + L ++ + + L L ++R +Q T + +
Sbjct: 1131 RAARNKAEKQKRDLGEELEALKTE-LEDTLDSTATQQELRAKREQEVTVLKKALDEETRS 1189
Query: 2316 HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQ 2375
H + +V E V EL E+ E ++ + +D K K+T++
Sbjct: 1190 H----------EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLD---------KNKQTLE 1230
Query: 2376 KLSNVLQQVKIKDYFEKLVGFIDDAVKKLNEL-SFKTFIEDVNKFLDMLIKKLKS--FDY 2432
K + D +L L K +E K L+ +++L+S D
Sbjct: 1231 KEN-------------------ADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDG 1271
Query: 2433 HQFVDETNDKIREVTQRLNGEIQALE-LPQKAEALKLFLEETKATVAVYLESLQDTKITL 2491
+ E NDK+ +L E++++ + +AE + L + A+++ LQDT+ L
Sbjct: 1272 ERARAELNDKV----HKLQNEVESVTGMLNEAEGKAIKLAKDVASLS---SQLQDTQELL 1324
Query: 2492 IINWLQEALSSASLAHMKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVTYIS 2551
Q+ S L ++ + R +L+D D +M+ +Q L+R++ STL +S
Sbjct: 1325 QEETRQKLNVSTKLRQLEEE-RNSLQDQLDE--EMEAKQNLERHI-------STLNIQLS 1374
Query: 2552 DWWTLAAKNLTDFAEQY-SIQDWAKRMKALVE 2582
D + K L DFA ++++ KR + +E
Sbjct: 1375 D----SKKKLQDFASTVEALEEGKKRFQKEIE 1402
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 46.2 bits (108), Expect = 7e-04
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 28/281 (9%)
Query: 2257 QIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVL-LDQLGTTISFERINDVLE 2315
Q + ++E+L++ + Q + ++ + + K I+ ++ +L +D +S ER + E
Sbjct: 957 QQMLDLEEQLEEEEAARQKLQLEKVTAEAK--IKKLEDEILVMDDQNNKLSKER-KLLEE 1013
Query: 2316 HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQ 2375
+ NL + E A+ + + K +I EV L + K ++ ++
Sbjct: 1014 RISDLTTNLAEEEEKAKNLTKLKNKHESMISELEV------------RLKKEEKSRQELE 1061
Query: 2376 KLSNVLQ------QVKIKDYFEKLVGFIDDAVKKLNELSFKTF-IEDVNKFLDMLIKKLK 2428
KL L+ +I D ++ KK EL ++D + +KK++
Sbjct: 1062 KLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIR 1121
Query: 2429 SFDYHQFVDETNDKIREVTQRLNGEIQALELPQKAEALKLFLEETKATVAVY--LESLQD 2486
+ H D D E R E Q +L ++ EALK LE+T + A L + ++
Sbjct: 1122 ELEGH-ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKRE 1180
Query: 2487 TKITLIINWLQEALSS--ASLAHMKAKFRETLEDTRDRMYQ 2525
++T++ L E S A + M+ K + +E+ +++ Q
Sbjct: 1181 QEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQ 1221
Score = 43.1 bits (100), Expect = 0.006
Identities = 95/452 (21%), Positives = 191/452 (42%), Gaps = 81/452 (17%)
Query: 2140 EKLTALTKKYR--ITENDIQIALDDAKINFNEKLSQ-LQTYMIQFDQYIKD-SYDLHDLK 2195
+ LT L K+ I+E ++++ ++ EKL + L+ F + I D + +LK
Sbjct: 1030 KNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELK 1089
Query: 2196 IAIANIIDEIIEKLKSLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTK 2255
+ +A +E+ L LD+ + N +K I +L I ++ +++D++
Sbjct: 1090 MQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQ------------EDLDSE 1137
Query: 2256 YQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLE 2315
R + +++ + L ++ + + L L ++R +Q T + +
Sbjct: 1138 RAARNKAEKQKRDLGEELEALKTE-LEDTLDSTATQQELRAKREQEVTVLKKALDEETRS 1196
Query: 2316 HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQ 2375
H + +V E V EL E+ E ++ + +D K K+T++
Sbjct: 1197 H----------EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLD---------KNKQTLE 1237
Query: 2376 KLSNVLQQVKIKDYFEKLVGFIDDAVKKLNEL-SFKTFIEDVNKFLDMLIKKLKS--FDY 2432
K + D +L L K +E K L+ +++L+S D
Sbjct: 1238 KEN-------------------ADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDG 1278
Query: 2433 HQFVDETNDKIREVTQRLNGEIQALE-LPQKAEALKLFLEETKATVAVYLESLQDTKITL 2491
+ E NDK+ +L E++++ + +AE + L + A+++ LQDT+ L
Sbjct: 1279 ERARAELNDKV----HKLQNEVESVTGMLNEAEGKAIKLAKDVASLS---SQLQDTQELL 1331
Query: 2492 IINWLQEALSSASLAHMKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVTYIS 2551
Q+ S L ++ + R +L+D D +M+ +Q L+R++ STL +S
Sbjct: 1332 QEETRQKLNVSTKLRQLEEE-RNSLQDQLDE--EMEAKQNLERHI-------STLNIQLS 1381
Query: 2552 DWWTLAAKNLTDFAEQY-SIQDWAKRMKALVE 2582
D + K L DFA ++++ KR + +E
Sbjct: 1382 D----SKKKLQDFASTVEALEEGKKRFQKEIE 1409
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 46.2 bits (108), Expect = 7e-04
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 28/281 (9%)
Query: 2257 QIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVL-LDQLGTTISFERINDVLE 2315
Q + ++E+L++ + Q + ++ + + K I+ ++ +L +D +S ER + E
Sbjct: 957 QQMLDLEEQLEEEEAARQKLQLEKVTAEAK--IKKLEDEILVMDDQNNKLSKER-KLLEE 1013
Query: 2316 HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQ 2375
+ NL + E A+ + + K +I EV L + K ++ ++
Sbjct: 1014 RISDLTTNLAEEEEKAKNLTKLKNKHESMISELEV------------RLKKEEKSRQELE 1061
Query: 2376 KLSNVLQ------QVKIKDYFEKLVGFIDDAVKKLNELSFKTF-IEDVNKFLDMLIKKLK 2428
KL L+ +I D ++ KK EL ++D + +KK++
Sbjct: 1062 KLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIR 1121
Query: 2429 SFDYHQFVDETNDKIREVTQRLNGEIQALELPQKAEALKLFLEETKATVAVY--LESLQD 2486
+ H D D E R E Q +L ++ EALK LE+T + A L + ++
Sbjct: 1122 ELEGH-ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKRE 1180
Query: 2487 TKITLIINWLQEALSS--ASLAHMKAKFRETLEDTRDRMYQ 2525
++T++ L E S A + M+ K + +E+ +++ Q
Sbjct: 1181 QEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQ 1221
Score = 43.1 bits (100), Expect = 0.006
Identities = 95/452 (21%), Positives = 191/452 (42%), Gaps = 81/452 (17%)
Query: 2140 EKLTALTKKYR--ITENDIQIALDDAKINFNEKLSQ-LQTYMIQFDQYIKD-SYDLHDLK 2195
+ LT L K+ I+E ++++ ++ EKL + L+ F + I D + +LK
Sbjct: 1030 KNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELK 1089
Query: 2196 IAIANIIDEIIEKLKSLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTK 2255
+ +A +E+ L LD+ + N +K I +L I ++ +++D++
Sbjct: 1090 MQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQ------------EDLDSE 1137
Query: 2256 YQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLE 2315
R + +++ + L ++ + + L L ++R +Q T + +
Sbjct: 1138 RAARNKAEKQKRDLGEELEALKTE-LEDTLDSTATQQELRAKREQEVTVLKKALDEETRS 1196
Query: 2316 HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQ 2375
H + +V E V EL E+ E ++ + +D K K+T++
Sbjct: 1197 H----------EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLD---------KNKQTLE 1237
Query: 2376 KLSNVLQQVKIKDYFEKLVGFIDDAVKKLNEL-SFKTFIEDVNKFLDMLIKKLKS--FDY 2432
K + D +L L K +E K L+ +++L+S D
Sbjct: 1238 KEN-------------------ADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDG 1278
Query: 2433 HQFVDETNDKIREVTQRLNGEIQALE-LPQKAEALKLFLEETKATVAVYLESLQDTKITL 2491
+ E NDK+ +L E++++ + +AE + L + A+++ LQDT+ L
Sbjct: 1279 ERARAELNDKV----HKLQNEVESVTGMLNEAEGKAIKLAKDVASLS---SQLQDTQELL 1331
Query: 2492 IINWLQEALSSASLAHMKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVTYIS 2551
Q+ S L ++ + R +L+D D +M+ +Q L+R++ STL +S
Sbjct: 1332 QEETRQKLNVSTKLRQLEEE-RNSLQDQLDE--EMEAKQNLERHI-------STLNIQLS 1381
Query: 2552 DWWTLAAKNLTDFAEQY-SIQDWAKRMKALVE 2582
D + K L DFA ++++ KR + +E
Sbjct: 1382 D----SKKKLQDFASTVEALEEGKKRFQKEIE 1409
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 46.2 bits (108), Expect = 7e-04
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 28/281 (9%)
Query: 2257 QIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVL-LDQLGTTISFERINDVLE 2315
Q + ++E+L++ + Q + ++ + + K I+ ++ +L +D +S ER + E
Sbjct: 950 QQMLDLEEQLEEEEAARQKLQLEKVTAEAK--IKKLEDEILVMDDQNNKLSKER-KLLEE 1006
Query: 2316 HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQ 2375
+ NL + E A+ + + K +I EV L + K ++ ++
Sbjct: 1007 RISDLTTNLAEEEEKAKNLTKLKNKHESMISELEV------------RLKKEEKSRQELE 1054
Query: 2376 KLSNVLQ------QVKIKDYFEKLVGFIDDAVKKLNELSFKTF-IEDVNKFLDMLIKKLK 2428
KL L+ +I D ++ KK EL ++D + +KK++
Sbjct: 1055 KLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIR 1114
Query: 2429 SFDYHQFVDETNDKIREVTQRLNGEIQALELPQKAEALKLFLEETKATVAVY--LESLQD 2486
+ H D D E R E Q +L ++ EALK LE+T + A L + ++
Sbjct: 1115 ELEGH-ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKRE 1173
Query: 2487 TKITLIINWLQEALSS--ASLAHMKAKFRETLEDTRDRMYQ 2525
++T++ L E S A + M+ K + +E+ +++ Q
Sbjct: 1174 QEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQ 1214
Score = 43.1 bits (100), Expect = 0.006
Identities = 95/452 (21%), Positives = 191/452 (42%), Gaps = 81/452 (17%)
Query: 2140 EKLTALTKKYR--ITENDIQIALDDAKINFNEKLSQ-LQTYMIQFDQYIKD-SYDLHDLK 2195
+ LT L K+ I+E ++++ ++ EKL + L+ F + I D + +LK
Sbjct: 1023 KNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELK 1082
Query: 2196 IAIANIIDEIIEKLKSLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTK 2255
+ +A +E+ L LD+ + N +K I +L I ++ +++D++
Sbjct: 1083 MQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQ------------EDLDSE 1130
Query: 2256 YQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLE 2315
R + +++ + L ++ + + L L ++R +Q T + +
Sbjct: 1131 RAARNKAEKQKRDLGEELEALKTE-LEDTLDSTATQQELRAKREQEVTVLKKALDEETRS 1189
Query: 2316 HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQ 2375
H + +V E V EL E+ E ++ + +D K K+T++
Sbjct: 1190 H----------EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLD---------KNKQTLE 1230
Query: 2376 KLSNVLQQVKIKDYFEKLVGFIDDAVKKLNEL-SFKTFIEDVNKFLDMLIKKLKS--FDY 2432
K + D +L L K +E K L+ +++L+S D
Sbjct: 1231 KEN-------------------ADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDG 1271
Query: 2433 HQFVDETNDKIREVTQRLNGEIQALE-LPQKAEALKLFLEETKATVAVYLESLQDTKITL 2491
+ E NDK+ +L E++++ + +AE + L + A+++ LQDT+ L
Sbjct: 1272 ERARAELNDKV----HKLQNEVESVTGMLNEAEGKAIKLAKDVASLS---SQLQDTQELL 1324
Query: 2492 IINWLQEALSSASLAHMKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVTYIS 2551
Q+ S L ++ + R +L+D D +M+ +Q L+R++ STL +S
Sbjct: 1325 QEETRQKLNVSTKLRQLEEE-RNSLQDQLDE--EMEAKQNLERHI-------STLNIQLS 1374
Query: 2552 DWWTLAAKNLTDFAEQY-SIQDWAKRMKALVE 2582
D + K L DFA ++++ KR + +E
Sbjct: 1375 D----SKKKLQDFASTVEALEEGKKRFQKEIE 1402
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 45.8 bits (107), Expect = 0.001
Identities = 103/534 (19%), Positives = 209/534 (39%), Gaps = 85/534 (15%)
Query: 2035 NIIDALEM--RDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEY---FERNRQTII 2089
N+I L+ + EK Q F + D+ Q +I+ F+T +E F+ +++
Sbjct: 1239 NLISTLKQWRSEVDEKRQVFHALE----DELQKAKAISDEMFKTYKERDLDFDWHKEKAD 1294
Query: 2090 VVLENVQRNLKHINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKL------T 2143
++E Q H+ ID +R L + Y +W +QV + K+
Sbjct: 1295 QLVERWQN--VHVQIDNRLRDLEGIGKSLKYYRDTYHPLDDWIQQVETTQRKIQENQPEN 1352
Query: 2144 ALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDL--------- 2194
+ T ++ + + ++ + K K+ + Q Y Q+ +KD Y+L +
Sbjct: 1353 SKTLATQLNQQKMLVSEIEMK---QSKMDECQKYAEQYSATVKD-YELQTMTYRAMVDSQ 1408
Query: 2195 ------KIAIANIIDEIIEKLKSLDEHYHIRVNLVKTI-------------HDLHLFIEN 2235
+ + + D II++ L Y V L+ + L E
Sbjct: 1409 QKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYIKFAGDSLKRLEEEEKSLEEEK 1468
Query: 2236 IDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID-V 2294
+ + W+ N+ ++ EK + Q I + ++ K +Q EA+ +
Sbjct: 1469 KEHVEKAKELQKWVSNISKT----LKDAEKAGKPPFSKQKISSEEISTKKEQLSEALQTI 1524
Query: 2295 RVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQI 2354
++ L + G ++ E N++ + VK + E N ++ + ++ + +
Sbjct: 1525 QLFLAKHGDKMTDEERNELEKQVK----------TLQESYNLLFSESLKQLQESQTSGDV 1574
Query: 2355 QVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSFKT--F 2412
+V ++ + Q + KE +Q + ++L Q + + + I D +L + K
Sbjct: 1575 KV--EEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGDGTVELKKYQSKQEEL 1632
Query: 2413 IEDVNKFLDMLIKKLKSFDYHQFVDETNDKIRE-----VTQRLN-GEIQALELPQKAEAL 2466
+D+ L + +K+ + F+ E +K+ + + Q+LN +I+ +L KAE
Sbjct: 1633 QKDMQGSAQALAEVVKNTE--NFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQS 1690
Query: 2467 KLFL---------EETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAK 2511
K L EET+ AV TKI +++WL + A K K
Sbjct: 1691 KKELDKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKDSERAGTKHK 1744
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 45.8 bits (107), Expect = 0.001
Identities = 103/534 (19%), Positives = 209/534 (39%), Gaps = 85/534 (15%)
Query: 2035 NIIDALEM--RDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEY---FERNRQTII 2089
N+I L+ + EK Q F + D+ Q +I+ F+T +E F+ +++
Sbjct: 1250 NLISTLKQWRSEVDEKRQVFHALE----DELQKAKAISDEMFKTYKERDLDFDWHKEKAD 1305
Query: 2090 VVLENVQRNLKHINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKL------T 2143
++E Q H+ ID +R L + Y +W +QV + K+
Sbjct: 1306 QLVERWQN--VHVQIDNRLRDLEGIGKSLKYYRDTYHPLDDWIQQVETTQRKIQENQPEN 1363
Query: 2144 ALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDL--------- 2194
+ T ++ + + ++ + K K+ + Q Y Q+ +KD Y+L +
Sbjct: 1364 SKTLATQLNQQKMLVSEIEMK---QSKMDECQKYAEQYSATVKD-YELQTMTYRAMVDSQ 1419
Query: 2195 ------KIAIANIIDEIIEKLKSLDEHYHIRVNLVKTI-------------HDLHLFIEN 2235
+ + + D II++ L Y V L+ + L E
Sbjct: 1420 QKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYIKFAGDSLKRLEEEEKSLEEEK 1479
Query: 2236 IDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID-V 2294
+ + W+ N+ ++ EK + Q I + ++ K +Q EA+ +
Sbjct: 1480 KEHVEKAKELQKWVSNISKT----LKDAEKAGKPPFSKQKISSEEISTKKEQLSEALQTI 1535
Query: 2295 RVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQI 2354
++ L + G ++ E N++ + VK + E N ++ + ++ + +
Sbjct: 1536 QLFLAKHGDKMTDEERNELEKQVK----------TLQESYNLLFSESLKQLQESQTSGDV 1585
Query: 2355 QVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSFKT--F 2412
+V ++ + Q + KE +Q + ++L Q + + + I D +L + K
Sbjct: 1586 KV--EEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGDGTVELKKYQSKQEEL 1643
Query: 2413 IEDVNKFLDMLIKKLKSFDYHQFVDETNDKIRE-----VTQRLN-GEIQALELPQKAEAL 2466
+D+ L + +K+ + F+ E +K+ + + Q+LN +I+ +L KAE
Sbjct: 1644 QKDMQGSAQALAEVVKNTE--NFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQS 1701
Query: 2467 KLFL---------EETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAK 2511
K L EET+ AV TKI +++WL + A K K
Sbjct: 1702 KKELDKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKDSERAGTKHK 1755
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 45.8 bits (107), Expect = 0.001
Identities = 103/534 (19%), Positives = 209/534 (39%), Gaps = 85/534 (15%)
Query: 2035 NIIDALEM--RDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEY---FERNRQTII 2089
N+I L+ + EK Q F + D+ Q +I+ F+T +E F+ +++
Sbjct: 1388 NLISTLKQWRSEVDEKRQVFHALE----DELQKAKAISDEMFKTYKERDLDFDWHKEKAD 1443
Query: 2090 VVLENVQRNLKHINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKL------T 2143
++E Q H+ ID +R L + Y +W +QV + K+
Sbjct: 1444 QLVERWQN--VHVQIDNRLRDLEGIGKSLKYYRDTYHPLDDWIQQVETTQRKIQENQPEN 1501
Query: 2144 ALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDL--------- 2194
+ T ++ + + ++ + K K+ + Q Y Q+ +KD Y+L +
Sbjct: 1502 SKTLATQLNQQKMLVSEIEMK---QSKMDECQKYAEQYSATVKD-YELQTMTYRAMVDSQ 1557
Query: 2195 ------KIAIANIIDEIIEKLKSLDEHYHIRVNLVKTI-------------HDLHLFIEN 2235
+ + + D II++ L Y V L+ + L E
Sbjct: 1558 QKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYIKFAGDSLKRLEEEEKSLEEEK 1617
Query: 2236 IDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID-V 2294
+ + W+ N+ ++ EK + Q I + ++ K +Q EA+ +
Sbjct: 1618 KEHVEKAKELQKWVSNISKT----LKDAEKAGKPPFSKQKISSEEISTKKEQLSEALQTI 1673
Query: 2295 RVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQI 2354
++ L + G ++ E N++ + VK + E N ++ + ++ + +
Sbjct: 1674 QLFLAKHGDKMTDEERNELEKQVK----------TLQESYNLLFSESLKQLQESQTSGDV 1723
Query: 2355 QVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSFKT--F 2412
+V ++ + Q + KE +Q + ++L Q + + + I D +L + K
Sbjct: 1724 KV--EEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGDGTVELKKYQSKQEEL 1781
Query: 2413 IEDVNKFLDMLIKKLKSFDYHQFVDETNDKIRE-----VTQRLN-GEIQALELPQKAEAL 2466
+D+ L + +K+ + F+ E +K+ + + Q+LN +I+ +L KAE
Sbjct: 1782 QKDMQGSAQALAEVVKNTE--NFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQS 1839
Query: 2467 KLFL---------EETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAK 2511
K L EET+ AV TKI +++WL + A K K
Sbjct: 1840 KKELDKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKDSERAGTKHK 1893
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 45.8 bits (107), Expect = 0.001
Identities = 103/534 (19%), Positives = 209/534 (39%), Gaps = 85/534 (15%)
Query: 2035 NIIDALEM--RDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEY---FERNRQTII 2089
N+I L+ + EK Q F + D+ Q +I+ F+T +E F+ +++
Sbjct: 1210 NLISTLKQWRSEVDEKRQVFHALE----DELQKAKAISDEMFKTYKERDLDFDWHKEKAD 1265
Query: 2090 VVLENVQRNLKHINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKL------T 2143
++E Q H+ ID +R L + Y +W +QV + K+
Sbjct: 1266 QLVERWQN--VHVQIDNRLRDLEGIGKSLKYYRDTYHPLDDWIQQVETTQRKIQENQPEN 1323
Query: 2144 ALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDL--------- 2194
+ T ++ + + ++ + K K+ + Q Y Q+ +KD Y+L +
Sbjct: 1324 SKTLATQLNQQKMLVSEIEMK---QSKMDECQKYAEQYSATVKD-YELQTMTYRAMVDSQ 1379
Query: 2195 ------KIAIANIIDEIIEKLKSLDEHYHIRVNLVKTI-------------HDLHLFIEN 2235
+ + + D II++ L Y V L+ + L E
Sbjct: 1380 QKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYIKFAGDSLKRLEEEEKSLEEEK 1439
Query: 2236 IDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID-V 2294
+ + W+ N+ ++ EK + Q I + ++ K +Q EA+ +
Sbjct: 1440 KEHVEKAKELQKWVSNISKT----LKDAEKAGKPPFSKQKISSEEISTKKEQLSEALQTI 1495
Query: 2295 RVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQI 2354
++ L + G ++ E N++ + VK + E N ++ + ++ + +
Sbjct: 1496 QLFLAKHGDKMTDEERNELEKQVK----------TLQESYNLLFSESLKQLQESQTSGDV 1545
Query: 2355 QVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSFKT--F 2412
+V ++ + Q + KE +Q + ++L Q + + + I D +L + K
Sbjct: 1546 KV--EEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGDGTVELKKYQSKQEEL 1603
Query: 2413 IEDVNKFLDMLIKKLKSFDYHQFVDETNDKIRE-----VTQRLN-GEIQALELPQKAEAL 2466
+D+ L + +K+ + F+ E +K+ + + Q+LN +I+ +L KAE
Sbjct: 1604 QKDMQGSAQALAEVVKNTE--NFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQS 1661
Query: 2467 KLFL---------EETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAK 2511
K L EET+ AV TKI +++WL + A K K
Sbjct: 1662 KKELDKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKDSERAGTKHK 1715
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 45.8 bits (107), Expect = 0.001
Identities = 103/534 (19%), Positives = 209/534 (39%), Gaps = 85/534 (15%)
Query: 2035 NIIDALEM--RDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEY---FERNRQTII 2089
N+I L+ + EK Q F + D+ Q +I+ F+T +E F+ +++
Sbjct: 884 NLISTLKQWRSEVDEKRQVFHALE----DELQKAKAISDEMFKTYKERDLDFDWHKEKAD 939
Query: 2090 VVLENVQRNLKHINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKL------T 2143
++E Q H+ ID +R L + Y +W +QV + K+
Sbjct: 940 QLVERWQN--VHVQIDNRLRDLEGIGKSLKYYRDTYHPLDDWIQQVETTQRKIQENQPEN 997
Query: 2144 ALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDL--------- 2194
+ T ++ + + ++ + K K+ + Q Y Q+ +KD Y+L +
Sbjct: 998 SKTLATQLNQQKMLVSEIEMK---QSKMDECQKYAEQYSATVKD-YELQTMTYRAMVDSQ 1053
Query: 2195 ------KIAIANIIDEIIEKLKSLDEHYHIRVNLVKTI-------------HDLHLFIEN 2235
+ + + D II++ L Y V L+ + L E
Sbjct: 1054 QKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYIKFAGDSLKRLEEEEKSLEEEK 1113
Query: 2236 IDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID-V 2294
+ + W+ N+ ++ EK + Q I + ++ K +Q EA+ +
Sbjct: 1114 KEHVEKAKELQKWVSNISKT----LKDAEKAGKPPFSKQKISSEEISTKKEQLSEALQTI 1169
Query: 2295 RVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQI 2354
++ L + G ++ E N++ + VK + E N ++ + ++ + +
Sbjct: 1170 QLFLAKHGDKMTDEERNELEKQVK----------TLQESYNLLFSESLKQLQESQTSGDV 1219
Query: 2355 QVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSFKT--F 2412
+V ++ + Q + KE +Q + ++L Q + + + I D +L + K
Sbjct: 1220 KV--EEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGDGTVELKKYQSKQEEL 1277
Query: 2413 IEDVNKFLDMLIKKLKSFDYHQFVDETNDKIRE-----VTQRLN-GEIQALELPQKAEAL 2466
+D+ L + +K+ + F+ E +K+ + + Q+LN +I+ +L KAE
Sbjct: 1278 QKDMQGSAQALAEVVKNTE--NFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQS 1335
Query: 2467 KLFL---------EETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAK 2511
K L EET+ AV TKI +++WL + A K K
Sbjct: 1336 KKELDKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKDSERAGTKHK 1389
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 45.1 bits (105), Expect = 0.002
Identities = 69/304 (22%), Positives = 150/304 (49%), Gaps = 43/304 (14%)
Query: 2249 IQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFE 2308
+Q ++ + Q QIQE+ + L R + + + AG ++Q + +++ ++L E
Sbjct: 1959 LQELEAEQQ---QIQEERELLSRQKEAMKAE--AGPVEQQLLQETEKLMKEKLEVQCQAE 2013
Query: 2309 RINDVLE-HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKL------ 2361
++ D L+ VK I++ + +V+ I + K EL++ + +Q ++ ++K+
Sbjct: 2014 KVRDDLQKQVKALEIDV--EEQVSRFIELEQEKNTELMDLRQQNQALEKQLEKMRKFLDE 2071
Query: 2362 --VELAHQYKL-KETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKL-NELSFKTFIEDVN 2417
++ H+ + ++ IQKL QQ+K+ F+ + V++L N L KT +
Sbjct: 2072 QAIDREHERDVFQQEIQKLE---QQLKVVPRFQPISEHQTREVEQLANHLKEKT-----D 2123
Query: 2418 KFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELP----QKAEALKLF---L 2470
K ++L+ K + + + E N++I ++ R+ QAL + QK E K F
Sbjct: 2124 KCSELLLSKEQ---LQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKHFGAVE 2180
Query: 2471 EETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLEDTRDRMYQMDIQQ 2530
+ + ++ V L++ +D I+ ++ +++ L +FRE LE+ + + Q+ +Q
Sbjct: 2181 AKPELSLEVQLQAERDA-----IDRKEKEITN--LEEQLEQFREELENKNEEVQQLHMQL 2233
Query: 2531 ELQR 2534
E+Q+
Sbjct: 2234 EIQK 2237
Score = 35.0 bits (79), Expect = 1.7
Identities = 64/412 (15%), Positives = 164/412 (39%), Gaps = 40/412 (9%)
Query: 2028 LLLSEPINIIDALEMRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQT 2087
LL E + D+ + A + P ++ K ++ +N E Y Q
Sbjct: 133 LLREEEFGVDDSYSEQGAQDSPTHLEMMESELAGKQHEIEELNRELEEMRVTYGTEGLQQ 192
Query: 2088 IIVVLENVQRNLKHINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTK 2147
L+ + +K D + + A L + ++ ++ + F +++ +KL +
Sbjct: 193 ----LQEFEAAIKQR--DGIITQLTANLQQARREKDETMREF---LELTEQSQKLQIQFQ 243
Query: 2148 KYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIE 2207
+ + +E + + Q+ T+ Q ++ D K I + E
Sbjct: 244 QLQASETLRNSTHSSTAADLLQAKQQILTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQE 303
Query: 2208 KLK--SLDEHYHIRVNLVKTIHDLHLFIENIDFN--KSGSSTASWIQNVDTKYQIRIQIQ 2263
K+K +++ + + + I + IE ++ + T + T ++ ++Q
Sbjct: 304 KIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTTADKLLGELQ 363
Query: 2264 EKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLEHVKHFVIN 2323
E++ Q + I+N+ ++ K K+ + +++ L +GT ++ N + ++
Sbjct: 364 EQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQL---MGTVEELQKRNHKDSQFETDIVQ 420
Query: 2324 LIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVEL-----AHQYKLKETIQKLS 2378
+ + E K+ RA++ E+ + V + +++ + ++ H+ +++ ++ S
Sbjct: 421 RM-EQETQRKLEQLRAELDEMYGQQIVQMKQELIRQHMAQMEEMKTRHKGEMENALRSYS 479
Query: 2379 NVL---QQVKIKDYFEKLVGFIDDAVKKLNELSFKTFIEDVNKFLDMLIKKL 2427
N+ Q+K+ + +NEL+ K ++D N + L ++L
Sbjct: 480 NITVNEDQIKLMNV-------------AINELNIK--LQDTNSQKEKLKEEL 516
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 44.7 bits (104), Expect = 0.002
Identities = 96/447 (21%), Positives = 190/447 (42%), Gaps = 64/447 (14%)
Query: 2131 WERQVSHAKEKLTA-------LTKKYRITENDIQIA---LDDAKINFNEKLSQLQTYMIQ 2180
WE S+ +++ L K+ EN++Q L D ++ ++L Q +++
Sbjct: 497 WEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVS-KQQLEQRLMQLME 555
Query: 2181 FDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHYHIRVNLVKTI----HDLHLFIENI 2236
+Q K L++ + +I+++ E LK+ + +H ++ + +LH I
Sbjct: 556 SEQ--KRVNKEESLQMQVQDILEQN-EALKAQIQQFHSQIAAQTSASVLAEELHKVIAEK 612
Query: 2237 D--FNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDV 2294
D ++ S AS + +K + IQ LK +Q + Q LA + Q A ++
Sbjct: 613 DKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKL--QALANE--QAAAAHEL 668
Query: 2295 RVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKIN-AFRAKVHEL--IERYEVD 2351
+ Q + ++I + E ++H + N + +F++ N A +++V +L + + +
Sbjct: 669 EKM--QQSVYVKDDKIRLLEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEQPN 726
Query: 2352 QQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYF--------EKLVGFIDDAVKK 2403
+ + M+K ++ + KLK + L L QV K+ L + D K
Sbjct: 727 KDVVEQMEKCIQEKDE-KLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAK 785
Query: 2404 LNE-LSFKTFIEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELPQK 2462
N+ +SF + +E++ K + E + KI+ V + L E+ L++ K
Sbjct: 786 QNDQVSFASLVEELKK----------------VIHEKDGKIKSVEELLEAEL--LKVANK 827
Query: 2463 AEALKLFLEETKATVA----VYLESLQDTKITLIINWLQEAL--SSASLAHMKAKFRETL 2516
+ ++ +E KA V LE Q IT + LQ L + MKA E
Sbjct: 828 EKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKE 887
Query: 2517 EDTRDR-MYQMDIQQELQRYLSLVGQV 2542
+D + + D+Q+E + + V +V
Sbjct: 888 KDLANTGKWLQDLQEENESLKAHVQEV 914
Score = 35.4 bits (80), Expect = 1.3
Identities = 59/273 (21%), Positives = 105/273 (38%), Gaps = 66/273 (24%)
Query: 4271 ELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQLIED------NIKQLKEMKFT- 4323
+LLK+ S Q+ K + T ++ LQ+ + + + ED KQL + T
Sbjct: 306 DLLKEKSGVIQDALKKSSKGELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMTE 365
Query: 4324 -----YLINYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIH 4378
+I ++D I T L K + QN++ + QE QQ+
Sbjct: 366 KERSNVVITRMKDRIGT--------------------LEKEHNVFQNKIHVSYQETQQMQ 405
Query: 4379 QYIMALREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTSQLSS 4438
+RE+ E ++ +K L+D + SN T+QL S
Sbjct: 406 MKFQQVREQM----------------EAEIAHLKQENGILRD-------AVSNTTNQLES 442
Query: 4439 QVEQFLHRNIQEYLSI---LTDPDGK-----GKEKIAELSATAQEIIKSQAIATKKIISD 4490
+ L++ Q+Y + LT+ GK ++K AE +AT ++ +A + +
Sbjct: 443 KQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQS 502
Query: 4491 YHQQFRYKLQDFSDQLSDYYEKFIAESKRLIDL 4523
Y R + + D KF+A+ + L
Sbjct: 503 Y---IRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Score = 35.0 bits (79), Expect = 1.7
Identities = 88/432 (20%), Positives = 175/432 (40%), Gaps = 78/432 (18%)
Query: 2092 LENVQRNLKHINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRI 2151
L + + LK I F+ K A + KL AN+ + + ++ ++ + K R+
Sbjct: 630 LTSKEEELKDIQNMNFLLK--AEVQKLQALANEQAAAAH---ELEKMQQSVYVKDDKIRL 684
Query: 2152 TENDIQIALDDAKINF---NEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEK 2208
E +Q + + F N++ L++ + + + + + D+ + I E EK
Sbjct: 685 LEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEQPN-KDVVEQMEKCIQEKDEK 743
Query: 2209 LKSLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQ 2268
LK+++E + V T + E SS +Q++ K ++ +++
Sbjct: 744 LKTVEELLETGLIQVATKEE-----ELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEE 798
Query: 2269 LKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLEHVKHFVINLIGDF 2328
LK+ I D GK+K E ++ LL + + + ++ +K + N+
Sbjct: 799 LKKVIHEKD-----GKIKSVEELLEAE-LLKVANKEKTVQDLKQEIKALKEEIGNV--QL 850
Query: 2329 EVAEKINAFRAKVHELI-----ERYEVDQQIQVLMDKLVELAHQYK-----------LKE 2372
E A++++ +KV EL + +++ VL +K +LA+ K LK
Sbjct: 851 EKAQQLS-ITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKA 909
Query: 2373 TIQKLS-NVLQQVKIKDYFEKLVGFIDDAVKKL-----------NELSFKTF----IEDV 2416
+Q+++ + L++ FE+L + + +L ++LS KT ++D
Sbjct: 910 HVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDE 969
Query: 2417 NKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELPQKAEALKLFLEETKAT 2476
NK I++LK +Y QA P E LK+ E K
Sbjct: 970 NKLFKSQIEQLKQQNYQ---------------------QASSFPPHEELLKVISEREKEI 1008
Query: 2477 VAVY--LESLQD 2486
++ L+SL+D
Sbjct: 1009 SGLWNELDSLKD 1020
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 44.3 bits (103), Expect = 0.003
Identities = 88/436 (20%), Positives = 185/436 (42%), Gaps = 60/436 (13%)
Query: 2114 ALGKLPQQANDYLNSFNWE-----------RQVSHAKEKLTALTKKYRITENDIQIALDD 2162
A+ L + YL NW+ QVS +E++ A ++ + + Q+A ++
Sbjct: 808 AMKVLQRNCAAYLKLRNWQWWRLFTKVKPLLQVSRQEEEMMAKEEEL-VKVREKQLAAEN 866
Query: 2163 AKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHYHIRVNL 2222
SQL +Q + ++ +L +E+ +L + + L
Sbjct: 867 RLTEMETLQSQLMAEKLQLQEQLQAETEL-------CAEAEELRARLTAKKQE------L 913
Query: 2223 VKTIHDLHLFIENIDFNKSGSSTASWIQNVDTKYQIRIQ-IQEKLQQLKRHIQNIDIQHL 2281
+ HDL +E + +Q K Q IQ ++E+L++ + Q + ++ +
Sbjct: 914 EEICHDLEARVEEEE------ERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKV 967
Query: 2282 A--GKLKQHIEAIDVRVLLDQLGTTISFERINDVLE-HVKHFVINLIGDFEVAEKI---- 2334
KLK+ E +++L+ ++ E+ +LE + F NL + E ++ +
Sbjct: 968 TTEAKLKKLEEE---QIILEDQNCKLAKEK--KLLEDRIAEFTTNLTEEEEKSKSLAKLK 1022
Query: 2335 NAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLV 2394
N A + +L ER +++ + ++K + KL+ LS+ + +++ + K+
Sbjct: 1023 NKHEAMITDLEERLRREEKQRQELEKT-----RRKLEGDSTDLSDQIAELQAQIAELKM- 1076
Query: 2395 GFIDDAVKKLNELSFKTF-IEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGE 2453
KK EL +E+ +M +KK++ + Q + D E R E
Sbjct: 1077 ----QLAKKEEELQAALARVEEEAAQKNMALKKIRELE-SQISELQEDLESERASRNKAE 1131
Query: 2454 IQALELPQKAEALKLFLEETKATVAVY--LESLQDTKITLIINWLQEALSS--ASLAHMK 2509
Q +L ++ EALK LE+T + A L S ++ ++ ++ L+E + A + M+
Sbjct: 1132 KQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEVNILKKTLEEEAKTHEAQIQEMR 1191
Query: 2510 AKFRETLEDTRDRMYQ 2525
K + +E+ +++ Q
Sbjct: 1192 QKHSQAVEELAEQLEQ 1207
Score = 33.5 bits (75), Expect = 5.0
Identities = 44/211 (20%), Positives = 91/211 (43%), Gaps = 6/211 (2%)
Query: 2329 EVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKD 2388
+V+ + AK EL++ E + + ++ L Q + E +Q + + ++
Sbjct: 839 QVSRQEEEMMAKEEELVKVREKQLAAENRLTEMETLQSQL-MAEKLQLQEQLQAETELCA 897
Query: 2389 YFEKLVGFIDDAVKKLNEL--SFKTFIEDVNKFLDMLIKKLKSFDYH-QFVDETNDKIRE 2445
E+L + ++L E+ + +E+ + L + K + Q ++E ++
Sbjct: 898 EAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEES 957
Query: 2446 VTQRLNGEIQALELP-QKAEALKLFLEETKATVAVYLESLQDTKITLIINWLQEALSSAS 2504
Q+L E E +K E ++ LE+ +A + L+D N +E S S
Sbjct: 958 ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKS 1017
Query: 2505 LAHMKAKFRETLEDTRDRMYQMDIQ-QELQR 2534
LA +K K + D +R+ + + Q QEL++
Sbjct: 1018 LAKLKNKHEAMITDLEERLRREEKQRQELEK 1048
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 43.9 bits (102), Expect = 0.004
Identities = 78/415 (18%), Positives = 177/415 (42%), Gaps = 36/415 (8%)
Query: 2130 NWERQVSHAKEKLTALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSY 2189
N +++ E + LTK+ + + Q ALDD ++ +K++ L ++ +Q + D
Sbjct: 979 NLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQVE-EDKVNSLSKSKVKLEQQVDDLE 1037
Query: 2190 DLHDLKIAIANIIDEIIEKLK---SLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTA 2246
+ + + ++ KL+ L + + + K + L + D N+ S
Sbjct: 1038 GSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKLQLEEKLKKKEFDINQQNS--- 1094
Query: 2247 SWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEA-IDVRVLLDQLGTTI 2305
++ + + +Q+Q+KL++ + I+ +L++ +EA R +++L + +
Sbjct: 1095 ----KIEDEQVLALQLQKKLKENQARIE---------ELEEELEAERTARAKVEKLRSDL 1141
Query: 2306 SFERINDVLEHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQVLMDKLVELA 2365
S E + ++ E ++ E+ +K A K+ +E + + +
Sbjct: 1142 SRE-LEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHAD 1200
Query: 2366 HQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNE-LSFKTFIEDVNKFLDMLI 2424
+L E I L V Q+++ + KL +DD + + + K +E V++ L+
Sbjct: 1201 SVAELGEQIDNLQRVKQKLEKEKSEFKLE--LDDVTSNMEQIIKAKANLEKVSRTLED-- 1256
Query: 2425 KKLKSFDYHQFVDETNDKIRE-VTQRLNGEIQALELPQKAEALKLFLEETKATVAVYLES 2483
++ +Y ++E + + TQR + + EL ++ E + + + Y +
Sbjct: 1257 ---QANEYRVKLEEAQRSLNDFTTQRAKLQTENGELARQLEEKEALISQLTRGKLSYTQQ 1313
Query: 2484 LQDTKITLIINWLQEALSSASLAHMKAKFRETLEDTRDRM-YQMDIQQELQRYLS 2537
++D K L +E + +LAH R + R++ + + + ELQR LS
Sbjct: 1314 MEDLKRQL----EEEGKAKNALAHALQSARHDCDLLREQYEEETEAKAELQRVLS 1364
Score = 43.1 bits (100), Expect = 0.006
Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 4353 CLNLHKFNEFIQNELQEASQELQQIHQYIMAL--REEYFDPSIVGWTVKYYELEEKIVSL 4410
C +L K +QNE+++ ++++ + AL ++ FD + W KY E + ++ S
Sbjct: 1413 CSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAEWKQKYEESQSELESS 1472
Query: 4411 IKNL------LVALKDFHSEYIVSASNFTSQLSSQVEQFLHRNIQEYLSILTDPDGKGKE 4464
K L LK+ + E + F + ++N+QE +S LT+ G+G +
Sbjct: 1473 QKEARSLSTELFKLKNAYEESLEHLETFKRE---------NKNLQEEISDLTEQLGEGGK 1523
Query: 4465 KIAELSATAQEI 4476
+ EL +++
Sbjct: 1524 NVHELEKVRKQL 1535
>gi|58535453 CDK5 regulatory subunit associated protein 2 isoform b
[Homo sapiens]
Length = 1814
Score = 43.5 bits (101), Expect = 0.005
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 4267 SMYRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQL---IEDNIKQLKEMKFT 4323
S Y EL++ L KE ++SL+ ++ + NLQ L IF L +E ++ + ++ T
Sbjct: 548 SDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQAELNKIFALRKQLEQDVLSYQNLRKT 607
Query: 4324 Y-----LINYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIH 4378
I ++E +++SD Y+ L+EN N + F Q EL++ +L Q+
Sbjct: 608 LEEQISEIRRREEESFSLYSDQTSYLSICLEEN---NRFQVEHFSQEELKKKVSDLIQLV 664
Query: 4379 QYIMA----LREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTS 4434
+ + L++ FD S +G+ + +++ S + L+A K+ + + +
Sbjct: 665 KELYTDNQHLKKTIFDLSCMGFQGNGF--PDRLASTEQTELLASKEDEDTIKIGEDDEIN 722
Query: 4435 QLSSQ 4439
LS Q
Sbjct: 723 FLSDQ 727
>gi|58535451 CDK5 regulatory subunit associated protein 2 isoform a
[Homo sapiens]
Length = 1893
Score = 43.5 bits (101), Expect = 0.005
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 4267 SMYRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQL---IEDNIKQLKEMKFT 4323
S Y EL++ L KE ++SL+ ++ + NLQ L IF L +E ++ + ++ T
Sbjct: 548 SDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQAELNKIFALRKQLEQDVLSYQNLRKT 607
Query: 4324 Y-----LINYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIH 4378
I ++E +++SD Y+ L+EN N + F Q EL++ +L Q+
Sbjct: 608 LEEQISEIRRREEESFSLYSDQTSYLSICLEEN---NRFQVEHFSQEELKKKVSDLIQLV 664
Query: 4379 QYIMA----LREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTS 4434
+ + L++ FD S +G+ + +++ S + L+A K+ + + +
Sbjct: 665 KELYTDNQHLKKTIFDLSCMGFQGNGF--PDRLASTEQTELLASKEDEDTIKIGEDDEIN 722
Query: 4435 QLSSQ 4439
LS Q
Sbjct: 723 FLSDQ 727
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 42.7 bits (99), Expect = 0.008
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 4353 CLNLHKFNEFIQNELQEASQELQQIHQYIMAL--REEYFDPSIVGWTVKYYELEEKIVSL 4410
C +L K + +QNE+++ ++++ + AL ++ FD + W KY E + ++ +
Sbjct: 1414 CASLEKTKQRLQNEVEDLMLDVERSNAACAALDKKQRNFDKVLSEWKQKYEETQAELEAS 1473
Query: 4411 IKNLLVALKDFHSEYIVSASNFTSQLSSQVEQFL--HRNIQEYLSILTDPDGKGKEKIAE 4468
K S + N + Q+E ++N+Q+ +S LT+ +G ++I E
Sbjct: 1474 QKESRSL-----STELFKVKNVYEESLDQLETLRRENKNLQQEISDLTEQIAEGGKQIHE 1528
Query: 4469 L----SATAQEIIKSQAIATKKIISDYHQQFR-YKLQDFSDQLSDYYEKFIAESKRLIDL 4523
L QE + QA + S H++ + ++Q +Q+ ++ IAE ID
Sbjct: 1529 LEKIKKQVEQEKCEIQAALEEAEASLEHEEGKILRIQLELNQVKSEVDRKIAEKDEEIDQ 1588
Query: 4524 SIQNYHTFLIYITELLKKLQST 4545
+N+ T +++ +QST
Sbjct: 1589 LKRNH-------TRVVETMQST 1603
Score = 33.9 bits (76), Expect = 3.8
Identities = 90/435 (20%), Positives = 175/435 (40%), Gaps = 56/435 (12%)
Query: 2139 KEKLTALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAI 2198
KEK K +TE + AK++ +K Q +T+ D + ++ L A
Sbjct: 969 KEKHATENKVKNLTEEMAGLDETIAKLSKEKKALQ-ETHQQTLDDLQAEEDKVNILTKAK 1027
Query: 2199 ANIIDEIIEKLKSLDEHYHIRVNL----------VKTIHDLHLFIEN----ID--FNKSG 2242
+ ++ + SL++ +R++L +K + + +EN +D K
Sbjct: 1028 TKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTMDMENDKQQLDEKLEKKE 1087
Query: 2243 SSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQ---HLAGKLKQHIEAIDVRVLLD 2299
++ I ++ + + IQ+Q+K+++L+ I+ + + A + K + D+ L+
Sbjct: 1088 FEISNLISKIEDEQAVEIQLQKKIKELQARIEELGEEIEAERASRAKAEKQRSDLSRELE 1147
Query: 2300 QL--------GTTISFERINDVLEHVKHFVINLIGDFEVA----EKINAFRAKVH--ELI 2345
++ G T + +N E L D E A E + A K H +
Sbjct: 1148 EISERLEEAGGATSAQVELNKKREAEFQ---KLRRDLEEATLQHEAMVAALRKKHADSMA 1204
Query: 2346 ERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLN 2405
E E +Q + KL + + K+ ET SN K K EK+ ++D V +L
Sbjct: 1205 ELGEQIDNLQRVKQKLEKEKSELKM-ETDDLSSNAEAISKAKGNLEKMCRSLEDQVSEL- 1262
Query: 2406 ELSFKTFIEDVNKFLDMLIK-----KLKSFDYHQFVDETNDKIREVTQRLNGEIQALELP 2460
KT E+ + ++ L + ++ +Y + +DE + + ++++ Q +E
Sbjct: 1263 ----KTKEEEQQRLINDLTAQRARLQTEAGEYSRQLDEKDALVSQLSRSKQASTQQIE-- 1316
Query: 2461 QKAEALKLFLEETKA--TVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLED 2518
E EETKA +A L+S + L + +E A L +K +
Sbjct: 1317 ---ELKHQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRALSKANSEVAQ 1373
Query: 2519 TRDRMYQMDIQQELQ 2533
R + Y+ D Q +
Sbjct: 1374 WRTK-YETDAIQRTE 1387
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 42.4 bits (98), Expect = 0.011
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 69/341 (20%)
Query: 2254 TKYQIRIQ-IQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERIND 2312
T +RIQ +QE LQ L++ +++ + A + + +E R L L T E +D
Sbjct: 428 TDNDVRIQQLQEILQDLQKRLESSE----AERKQLQVELQSRRAELVCLNNTEISENSSD 483
Query: 2313 VLEHVKHFVINLIGDFEVAEKINAFRAKVHELI-ERYEVDQQIQ---VLMDKLVELAHQY 2368
+ ++K+ ++K E + E V +Q++ V + + +H +
Sbjct: 484 L-----------------SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFH 526
Query: 2369 KLKETIQKLSNVLQQ-------------VKIKDYFEKLVG-----FIDDAVKKLNEL--S 2408
+L+ T +++ NVL+Q K+++ EKLV I V++ E+ S
Sbjct: 527 ELRVTEEEI-NVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSS 585
Query: 2409 FKTFIEDVNKFLDML----------IKKLKSFDYHQFVDETNDKIREVTQRLNGEIQAL- 2457
+ + IE++NK L I KLK Q E +D+ ++ + +N I L
Sbjct: 586 YCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELN 645
Query: 2458 ----ELPQKAEALKLFLEETKA------TVAVYLESLQDTKITLIINWLQEALSSASLAH 2507
EL Q + + LE+ + A Y+ + K+ + N + A + +L+
Sbjct: 646 KQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTN-VSRAKAEDALSE 704
Query: 2508 MKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVT 2548
MK+++ + L + +D Q+E ++ QV +TL T
Sbjct: 705 MKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRT 745
Score = 40.4 bits (93), Expect = 0.041
Identities = 71/418 (16%), Positives = 165/418 (39%), Gaps = 84/418 (20%)
Query: 2045 AVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLKHINI 2104
+V+K + +V+ D H + + +E +Q + LE +RN + +
Sbjct: 504 SVQKQMKLGLVSPESMDNYSHFHELRVT-----EEEINVLKQDLQNALEESERNKEKVRE 558
Query: 2105 --DQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIALDD 2162
++ V + + + K P + + + S ++ + + ++ L +KY+ + +I D
Sbjct: 559 LEEKLVEREKGTVIKPPVEEYEEMKS-SYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDT 617
Query: 2163 AKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHY------ 2216
K ++ S + D+K A+ +IDE+ +++ L + Y
Sbjct: 618 LKSQMTQEASD----------------EAEDMKEAMNRMIDELNKQVSELSQLYKEAQAE 661
Query: 2217 ------------------------------------------HIRVNLVKTIHDLHLFIE 2234
++ K +++L +
Sbjct: 662 LEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQ 721
Query: 2235 NIDFNKSGS-STASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID 2293
+D K S S +Q + T +++EK+ LK H+ + +++ +A KQ +E +
Sbjct: 722 LVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVE-VAKLEKQLLE--E 778
Query: 2294 VRVLLDQLGTTISFERINDVLE-HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQ 2352
+ D + S+E++ LE V L + EK+++ ++ + + + ++
Sbjct: 779 KAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREK 838
Query: 2353 Q-IQVLMDKLVELAHQYKLKETIQKLSNVLQQV-KIKDYFEKLVGFIDDAVKKLNELS 2408
+ IQ L+ + + ++ E +QK +++ ++K Y E +D KK+NE+S
Sbjct: 839 ENIQTLLK-----SKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEEDKDKKINEMS 891
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 42.4 bits (98), Expect = 0.011
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 69/341 (20%)
Query: 2254 TKYQIRIQ-IQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERIND 2312
T +RIQ +QE LQ L++ +++ + A + + +E R L L T E +D
Sbjct: 417 TDNDVRIQQLQEILQDLQKRLESSE----AERKQLQVELQSRRAELVCLNNTEISENSSD 472
Query: 2313 VLEHVKHFVINLIGDFEVAEKINAFRAKVHELI-ERYEVDQQIQ---VLMDKLVELAHQY 2368
+ ++K+ ++K E + E V +Q++ V + + +H +
Sbjct: 473 L-----------------SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFH 515
Query: 2369 KLKETIQKLSNVLQQ-------------VKIKDYFEKLVG-----FIDDAVKKLNEL--S 2408
+L+ T +++ NVL+Q K+++ EKLV I V++ E+ S
Sbjct: 516 ELRVTEEEI-NVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSS 574
Query: 2409 FKTFIEDVNKFLDML----------IKKLKSFDYHQFVDETNDKIREVTQRLNGEIQAL- 2457
+ + IE++NK L I KLK Q E +D+ ++ + +N I L
Sbjct: 575 YCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELN 634
Query: 2458 ----ELPQKAEALKLFLEETKA------TVAVYLESLQDTKITLIINWLQEALSSASLAH 2507
EL Q + + LE+ + A Y+ + K+ + N + A + +L+
Sbjct: 635 KQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTN-VSRAKAEDALSE 693
Query: 2508 MKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVT 2548
MK+++ + L + +D Q+E ++ QV +TL T
Sbjct: 694 MKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRT 734
Score = 40.4 bits (93), Expect = 0.041
Identities = 71/418 (16%), Positives = 165/418 (39%), Gaps = 84/418 (20%)
Query: 2045 AVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLKHINI 2104
+V+K + +V+ D H + + +E +Q + LE +RN + +
Sbjct: 493 SVQKQMKLGLVSPESMDNYSHFHELRVT-----EEEINVLKQDLQNALEESERNKEKVRE 547
Query: 2105 --DQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIALDD 2162
++ V + + + K P + + + S ++ + + ++ L +KY+ + +I D
Sbjct: 548 LEEKLVEREKGTVIKPPVEEYEEMKS-SYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDT 606
Query: 2163 AKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHY------ 2216
K ++ S + D+K A+ +IDE+ +++ L + Y
Sbjct: 607 LKSQMTQEASD----------------EAEDMKEAMNRMIDELNKQVSELSQLYKEAQAE 650
Query: 2217 ------------------------------------------HIRVNLVKTIHDLHLFIE 2234
++ K +++L +
Sbjct: 651 LEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQ 710
Query: 2235 NIDFNKSGS-STASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID 2293
+D K S S +Q + T +++EK+ LK H+ + +++ +A KQ +E +
Sbjct: 711 LVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVE-VAKLEKQLLE--E 767
Query: 2294 VRVLLDQLGTTISFERINDVLE-HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQ 2352
+ D + S+E++ LE V L + EK+++ ++ + + + ++
Sbjct: 768 KAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREK 827
Query: 2353 Q-IQVLMDKLVELAHQYKLKETIQKLSNVLQQV-KIKDYFEKLVGFIDDAVKKLNELS 2408
+ IQ L+ + + ++ E +QK +++ ++K Y E +D KK+NE+S
Sbjct: 828 ENIQTLLK-----SKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEEDKDKKINEMS 880
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 42.4 bits (98), Expect = 0.011
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 69/341 (20%)
Query: 2254 TKYQIRIQ-IQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERIND 2312
T +RIQ +QE LQ L++ +++ + A + + +E R L L T E +D
Sbjct: 396 TDNDVRIQQLQEILQDLQKRLESSE----AERKQLQVELQSRRAELVCLNNTEISENSSD 451
Query: 2313 VLEHVKHFVINLIGDFEVAEKINAFRAKVHELI-ERYEVDQQIQ---VLMDKLVELAHQY 2368
+ ++K+ ++K E + E V +Q++ V + + +H +
Sbjct: 452 L-----------------SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFH 494
Query: 2369 KLKETIQKLSNVLQQ-------------VKIKDYFEKLVG-----FIDDAVKKLNEL--S 2408
+L+ T +++ NVL+Q K+++ EKLV I V++ E+ S
Sbjct: 495 ELRVTEEEI-NVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSS 553
Query: 2409 FKTFIEDVNKFLDML----------IKKLKSFDYHQFVDETNDKIREVTQRLNGEIQAL- 2457
+ + IE++NK L I KLK Q E +D+ ++ + +N I L
Sbjct: 554 YCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELN 613
Query: 2458 ----ELPQKAEALKLFLEETKA------TVAVYLESLQDTKITLIINWLQEALSSASLAH 2507
EL Q + + LE+ + A Y+ + K+ + N + A + +L+
Sbjct: 614 KQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTN-VSRAKAEDALSE 672
Query: 2508 MKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVT 2548
MK+++ + L + +D Q+E ++ QV +TL T
Sbjct: 673 MKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRT 713
Score = 40.4 bits (93), Expect = 0.041
Identities = 71/418 (16%), Positives = 165/418 (39%), Gaps = 84/418 (20%)
Query: 2045 AVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLKHINI 2104
+V+K + +V+ D H + + +E +Q + LE +RN + +
Sbjct: 472 SVQKQMKLGLVSPESMDNYSHFHELRVT-----EEEINVLKQDLQNALEESERNKEKVRE 526
Query: 2105 --DQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIALDD 2162
++ V + + + K P + + + S ++ + + ++ L +KY+ + +I D
Sbjct: 527 LEEKLVEREKGTVIKPPVEEYEEMKS-SYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDT 585
Query: 2163 AKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHY------ 2216
K ++ S + D+K A+ +IDE+ +++ L + Y
Sbjct: 586 LKSQMTQEASD----------------EAEDMKEAMNRMIDELNKQVSELSQLYKEAQAE 629
Query: 2217 ------------------------------------------HIRVNLVKTIHDLHLFIE 2234
++ K +++L +
Sbjct: 630 LEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQ 689
Query: 2235 NIDFNKSGS-STASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID 2293
+D K S S +Q + T +++EK+ LK H+ + +++ +A KQ +E +
Sbjct: 690 LVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVE-VAKLEKQLLE--E 746
Query: 2294 VRVLLDQLGTTISFERINDVLE-HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQ 2352
+ D + S+E++ LE V L + EK+++ ++ + + + ++
Sbjct: 747 KAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREK 806
Query: 2353 Q-IQVLMDKLVELAHQYKLKETIQKLSNVLQQV-KIKDYFEKLVGFIDDAVKKLNELS 2408
+ IQ L+ + + ++ E +QK +++ ++K Y E +D KK+NE+S
Sbjct: 807 ENIQTLLK-----SKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEEDKDKKINEMS 859
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 42.4 bits (98), Expect = 0.011
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 69/341 (20%)
Query: 2254 TKYQIRIQ-IQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERIND 2312
T +RIQ +QE LQ L++ +++ + A + + +E R L L T E +D
Sbjct: 425 TDNDVRIQQLQEILQDLQKRLESSE----AERKQLQVELQSRRAELVCLNNTEISENSSD 480
Query: 2313 VLEHVKHFVINLIGDFEVAEKINAFRAKVHELI-ERYEVDQQIQ---VLMDKLVELAHQY 2368
+ ++K+ ++K E + E V +Q++ V + + +H +
Sbjct: 481 L-----------------SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFH 523
Query: 2369 KLKETIQKLSNVLQQ-------------VKIKDYFEKLVG-----FIDDAVKKLNEL--S 2408
+L+ T +++ NVL+Q K+++ EKLV I V++ E+ S
Sbjct: 524 ELRVTEEEI-NVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSS 582
Query: 2409 FKTFIEDVNKFLDML----------IKKLKSFDYHQFVDETNDKIREVTQRLNGEIQAL- 2457
+ + IE++NK L I KLK Q E +D+ ++ + +N I L
Sbjct: 583 YCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELN 642
Query: 2458 ----ELPQKAEALKLFLEETKA------TVAVYLESLQDTKITLIINWLQEALSSASLAH 2507
EL Q + + LE+ + A Y+ + K+ + N + A + +L+
Sbjct: 643 KQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTN-VSRAKAEDALSE 701
Query: 2508 MKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVT 2548
MK+++ + L + +D Q+E ++ QV +TL T
Sbjct: 702 MKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRT 742
Score = 40.4 bits (93), Expect = 0.041
Identities = 71/418 (16%), Positives = 165/418 (39%), Gaps = 84/418 (20%)
Query: 2045 AVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLKHINI 2104
+V+K + +V+ D H + + +E +Q + LE +RN + +
Sbjct: 501 SVQKQMKLGLVSPESMDNYSHFHELRVT-----EEEINVLKQDLQNALEESERNKEKVRE 555
Query: 2105 --DQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIALDD 2162
++ V + + + K P + + + S ++ + + ++ L +KY+ + +I D
Sbjct: 556 LEEKLVEREKGTVIKPPVEEYEEMKS-SYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDT 614
Query: 2163 AKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHY------ 2216
K ++ S + D+K A+ +IDE+ +++ L + Y
Sbjct: 615 LKSQMTQEASD----------------EAEDMKEAMNRMIDELNKQVSELSQLYKEAQAE 658
Query: 2217 ------------------------------------------HIRVNLVKTIHDLHLFIE 2234
++ K +++L +
Sbjct: 659 LEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQ 718
Query: 2235 NIDFNKSGS-STASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID 2293
+D K S S +Q + T +++EK+ LK H+ + +++ +A KQ +E +
Sbjct: 719 LVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVE-VAKLEKQLLE--E 775
Query: 2294 VRVLLDQLGTTISFERINDVLE-HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQ 2352
+ D + S+E++ LE V L + EK+++ ++ + + + ++
Sbjct: 776 KAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREK 835
Query: 2353 Q-IQVLMDKLVELAHQYKLKETIQKLSNVLQQV-KIKDYFEKLVGFIDDAVKKLNELS 2408
+ IQ L+ + + ++ E +QK +++ ++K Y E +D KK+NE+S
Sbjct: 836 ENIQTLLK-----SKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEEDKDKKINEMS 888
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 42.4 bits (98), Expect = 0.011
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 69/341 (20%)
Query: 2254 TKYQIRIQ-IQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERIND 2312
T +RIQ +QE LQ L++ +++ + A + + +E R L L T E +D
Sbjct: 425 TDNDVRIQQLQEILQDLQKRLESSE----AERKQLQVELQSRRAELVCLNNTEISENSSD 480
Query: 2313 VLEHVKHFVINLIGDFEVAEKINAFRAKVHELI-ERYEVDQQIQ---VLMDKLVELAHQY 2368
+ ++K+ ++K E + E V +Q++ V + + +H +
Sbjct: 481 L-----------------SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFH 523
Query: 2369 KLKETIQKLSNVLQQ-------------VKIKDYFEKLVG-----FIDDAVKKLNEL--S 2408
+L+ T +++ NVL+Q K+++ EKLV I V++ E+ S
Sbjct: 524 ELRVTEEEI-NVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSS 582
Query: 2409 FKTFIEDVNKFLDML----------IKKLKSFDYHQFVDETNDKIREVTQRLNGEIQAL- 2457
+ + IE++NK L I KLK Q E +D+ ++ + +N I L
Sbjct: 583 YCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELN 642
Query: 2458 ----ELPQKAEALKLFLEETKA------TVAVYLESLQDTKITLIINWLQEALSSASLAH 2507
EL Q + + LE+ + A Y+ + K+ + N + A + +L+
Sbjct: 643 KQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTN-VSRAKAEDALSE 701
Query: 2508 MKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVT 2548
MK+++ + L + +D Q+E ++ QV +TL T
Sbjct: 702 MKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRT 742
Score = 40.4 bits (93), Expect = 0.041
Identities = 71/418 (16%), Positives = 165/418 (39%), Gaps = 84/418 (20%)
Query: 2045 AVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLKHINI 2104
+V+K + +V+ D H + + +E +Q + LE +RN + +
Sbjct: 501 SVQKQMKLGLVSPESMDNYSHFHELRVT-----EEEINVLKQDLQNALEESERNKEKVRE 555
Query: 2105 --DQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIALDD 2162
++ V + + + K P + + + S ++ + + ++ L +KY+ + +I D
Sbjct: 556 LEEKLVEREKGTVIKPPVEEYEEMKS-SYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDT 614
Query: 2163 AKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHY------ 2216
K ++ S + D+K A+ +IDE+ +++ L + Y
Sbjct: 615 LKSQMTQEASD----------------EAEDMKEAMNRMIDELNKQVSELSQLYKEAQAE 658
Query: 2217 ------------------------------------------HIRVNLVKTIHDLHLFIE 2234
++ K +++L +
Sbjct: 659 LEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQ 718
Query: 2235 NIDFNKSGS-STASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID 2293
+D K S S +Q + T +++EK+ LK H+ + +++ +A KQ +E +
Sbjct: 719 LVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVE-VAKLEKQLLE--E 775
Query: 2294 VRVLLDQLGTTISFERINDVLE-HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQ 2352
+ D + S+E++ LE V L + EK+++ ++ + + + ++
Sbjct: 776 KAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREK 835
Query: 2353 Q-IQVLMDKLVELAHQYKLKETIQKLSNVLQQV-KIKDYFEKLVGFIDDAVKKLNELS 2408
+ IQ L+ + + ++ E +QK +++ ++K Y E +D KK+NE+S
Sbjct: 836 ENIQTLLK-----SKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEEDKDKKINEMS 888
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 42.4 bits (98), Expect = 0.011
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 69/341 (20%)
Query: 2254 TKYQIRIQ-IQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFERIND 2312
T +RIQ +QE LQ L++ +++ + A + + +E R L L T E +D
Sbjct: 425 TDNDVRIQQLQEILQDLQKRLESSE----AERKQLQVELQSRRAELVCLNNTEISENSSD 480
Query: 2313 VLEHVKHFVINLIGDFEVAEKINAFRAKVHELI-ERYEVDQQIQ---VLMDKLVELAHQY 2368
+ ++K+ ++K E + E V +Q++ V + + +H +
Sbjct: 481 L-----------------SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFH 523
Query: 2369 KLKETIQKLSNVLQQ-------------VKIKDYFEKLVG-----FIDDAVKKLNEL--S 2408
+L+ T +++ NVL+Q K+++ EKLV I V++ E+ S
Sbjct: 524 ELRVTEEEI-NVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSS 582
Query: 2409 FKTFIEDVNKFLDML----------IKKLKSFDYHQFVDETNDKIREVTQRLNGEIQAL- 2457
+ + IE++NK L I KLK Q E +D+ ++ + +N I L
Sbjct: 583 YCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELN 642
Query: 2458 ----ELPQKAEALKLFLEETKA------TVAVYLESLQDTKITLIINWLQEALSSASLAH 2507
EL Q + + LE+ + A Y+ + K+ + N + A + +L+
Sbjct: 643 KQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTN-VSRAKAEDALSE 701
Query: 2508 MKAKFRETLEDTRDRMYQMDIQQELQRYLSLVGQVYSTLVT 2548
MK+++ + L + +D Q+E ++ QV +TL T
Sbjct: 702 MKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRT 742
Score = 40.4 bits (93), Expect = 0.041
Identities = 71/418 (16%), Positives = 165/418 (39%), Gaps = 84/418 (20%)
Query: 2045 AVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLKHINI 2104
+V+K + +V+ D H + + +E +Q + LE +RN + +
Sbjct: 501 SVQKQMKLGLVSPESMDNYSHFHELRVT-----EEEINVLKQDLQNALEESERNKEKVRE 555
Query: 2105 --DQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIALDD 2162
++ V + + + K P + + + S ++ + + ++ L +KY+ + +I D
Sbjct: 556 LEEKLVEREKGTVIKPPVEEYEEMKS-SYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDT 614
Query: 2163 AKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHY------ 2216
K ++ S + D+K A+ +IDE+ +++ L + Y
Sbjct: 615 LKSQMTQEASD----------------EAEDMKEAMNRMIDELNKQVSELSQLYKEAQAE 658
Query: 2217 ------------------------------------------HIRVNLVKTIHDLHLFIE 2234
++ K +++L +
Sbjct: 659 LEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQ 718
Query: 2235 NIDFNKSGS-STASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAID 2293
+D K S S +Q + T +++EK+ LK H+ + +++ +A KQ +E +
Sbjct: 719 LVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVE-VAKLEKQLLE--E 775
Query: 2294 VRVLLDQLGTTISFERINDVLE-HVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQ 2352
+ D + S+E++ LE V L + EK+++ ++ + + + ++
Sbjct: 776 KAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREK 835
Query: 2353 Q-IQVLMDKLVELAHQYKLKETIQKLSNVLQQV-KIKDYFEKLVGFIDDAVKKLNELS 2408
+ IQ L+ + + ++ E +QK +++ ++K Y E +D KK+NE+S
Sbjct: 836 ENIQTLLK-----SKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEEDKDKKINEMS 888
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 41.6 bits (96), Expect = 0.018
Identities = 80/416 (19%), Positives = 173/416 (41%), Gaps = 62/416 (14%)
Query: 2132 ERQVSHAKEKLTALTKKYRITENDI---QIALDDAKINFNEKLSQLQTYMIQFDQYIKDS 2188
++ + KE LTA ++ I + ++ ++ L++ + N+K QLQ + +
Sbjct: 468 KQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEI 527
Query: 2189 YDLHDLKIAIANIIDEIIEKLKSLDEHYHIRVNLVKTIHDLHLFIENIDFNKSGSSTASW 2248
D+ D+ I+ + +K+++L E + + + D ++++ + S + TA
Sbjct: 528 RDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDR---VKSLQTDSSNTDTA-- 582
Query: 2249 IQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRVLLDQLGTTISFE 2308
+ ++ + +I E+L++ + ++ + K++ + + +V Q T
Sbjct: 583 LATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKEN-KDLKEKVNALQAELTEKES 641
Query: 2309 RINDVLEH--------------VKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQI 2354
+ D+ EH +K I + E K+ A K H + + ++ +
Sbjct: 642 SLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECSKLEAQLKKAHNIEDDSRMNPEF 701
Query: 2355 QVLMDKLVELAHQY-----KLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKKLNELSF 2409
+ +L + A Y K + + +L +L++V+ + +D KK+ EL
Sbjct: 702 ADQIKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEK---------NDKDKKIAELES 752
Query: 2410 KTF--IEDVNKFLDML-----IKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELPQK 2462
T ++D NK + L ++K K+ + V D + + +Q L Q EL
Sbjct: 753 LTLRHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREDSMADNSQHL----QIEELMNA 808
Query: 2463 AEALKLFLEETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLED 2518
E + L+ TKA +A +SL A A LA+++ + R+ LE+
Sbjct: 809 LEKTRQELDATKARLASTQQSL--------------AEKEAHLANLRIERRKQLEE 850
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 41.2 bits (95), Expect = 0.024
Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 4366 ELQEASQELQQIHQYIMAL---REEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFH 4422
+LQEA +L + + + R+ FD S+ W +Y+++
Sbjct: 2065 KLQEALSQLDFQWEKVNKMYKDRQGRFDRSVEKWRRFHYDIK----------------IF 2108
Query: 4423 SEYIVSASNFTSQLSSQVEQFLHRNIQEYLSILTDPDGKGKEKIAELSATAQEIIKSQAI 4482
++++ A F + E + H + YL L D G+ + + L+AT +EII+ +
Sbjct: 2109 NQWLTEAEQFLRKTQIP-ENWEHAKYKWYLKELQDGIGQRQTVVRTLNATGEEIIQQSSK 2167
Query: 4483 ATKKIISDYHQQFRYKLQDFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYITE 4537
I+ + + Q+ QLSD +K + E K ++ ++ + F++++ E
Sbjct: 2168 TDASILQEKLGSLNLRWQEVCKQLSD-RKKRLEEQKNILSEFQRDLNEFVLWLEE 2221
Score = 35.0 bits (79), Expect = 1.7
Identities = 62/316 (19%), Positives = 128/316 (40%), Gaps = 40/316 (12%)
Query: 2237 DFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQHLAGKLKQHIEAIDVRV 2296
DFN++ + W+ +D + + + L+ + I +KQ D+
Sbjct: 2466 DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMI-----------IKQKATMQDLEQ 2514
Query: 2297 LLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAKVHELIERYEVDQQIQV 2356
QL E + +++K+ N + ++I + + E+ E + + Q
Sbjct: 2515 RRPQL------EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQ--NRRQQ 2566
Query: 2357 LMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAV-KKLNELS-----FK 2410
L + L + + KE ++ VL Q + K K + DA+ KK+ E +
Sbjct: 2567 LNEMLKDSTQWLEAKEEAEQ---VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLR 2623
Query: 2411 TFIEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELPQKAEALKLFL 2470
+ +V+ D+ +K L+ + D+T K+ +T+ +N +++ ++ + L
Sbjct: 2624 QWQTNVDVANDLALKLLRDYS----ADDTR-KVHMITENINASWRSIH--KRVSEREAAL 2676
Query: 2471 EETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLEDTRDRMYQMDIQQ 2530
EET + + L+ + WL EA ++A++ + LED++ M Q
Sbjct: 2677 EETHRLLQQFPLDLEK-----FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQ 2731
Query: 2531 ELQRYLSLVGQVYSTL 2546
+LQ + VY L
Sbjct: 2732 DLQGEIEAHTDVYHNL 2747
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,260,661
Number of Sequences: 37866
Number of extensions: 6696006
Number of successful extensions: 18970
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 18298
Number of HSP's gapped (non-prelim): 737
length of query: 4563
length of database: 18,247,518
effective HSP length: 123
effective length of query: 4440
effective length of database: 13,590,000
effective search space: 60339600000
effective search space used: 60339600000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.