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Search of human proteins with 10518506
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10518506 coagulation factor VIII isoform b precursor [Homo
sapiens]
(216 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10518506 coagulation factor VIII isoform b precursor [Homo sa... 446 e-126
gi|4503647 coagulation factor VIII isoform a precursor [Homo sap... 429 e-121
gi|105990535 coagulation factor V precursor [Homo sapiens] 198 3e-51
gi|31317224 EGF-like repeats and discoidin I-like domains-contai... 183 8e-47
gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Ho... 167 8e-42
gi|41872572 neuropilin 2 isoform 3 precursor [Homo sapiens] 128 4e-30
gi|41872567 neuropilin 2 isoform 5 precursor [Homo sapiens] 128 4e-30
gi|41872562 neuropilin 2 isoform 1 precursor [Homo sapiens] 128 4e-30
gi|41872557 neuropilin 2 isoform 6 precursor [Homo sapiens] 128 4e-30
gi|41872544 neuropilin 2 isoform 4 precursor [Homo sapiens] 128 4e-30
gi|41872533 neuropilin 2 isoform 2 precursor [Homo sapiens] 128 4e-30
gi|54792129 discoidin, CUB and LCCL domain containing 2 [Homo sa... 120 9e-28
gi|167830477 milk fat globule-EGF factor 8 protein isoform b [Ho... 117 6e-27
gi|66864913 neuropilin 1 isoform c [Homo sapiens] 113 1e-25
gi|66912178 neuropilin 1 isoform b [Homo sapiens] 113 1e-25
gi|182508169 neuropilin 1 isoform a [Homo sapiens] 113 1e-25
gi|27735143 discoidin, CUB and LCCL domain containing 1 [Homo sa... 110 9e-25
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 102 2e-22
gi|223005864 carboxypeptidase X (M14 family), member 2 [Homo sap... 101 4e-22
gi|10835083 X-linked juvenile retinoschisis protein precursor [H... 96 2e-20
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 84 9e-17
gi|9994201 carboxypeptidase X, member 1 precursor [Homo sapiens] 82 3e-16
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 80 1e-15
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 80 1e-15
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 77 9e-15
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 77 9e-15
gi|239743729 PREDICTED: similar to contactin associated protein-... 77 9e-15
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 77 9e-15
gi|38327632 discoidin domain receptor family, member 1 isoform b... 74 1e-13
gi|83977452 discoidin domain receptor family, member 1 isoform c... 74 1e-13
>gi|10518506 coagulation factor VIII isoform b precursor [Homo
sapiens]
Length = 216
Score = 446 bits (1147), Expect = e-126
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MRIQDPGKVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSM 60
MRIQDPGKVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSM
Sbjct: 1 MRIQDPGKVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSM 60
Query: 61 PLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQK 120
PLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQK
Sbjct: 61 PLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQK 120
Query: 121 TMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNS 180
TMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNS
Sbjct: 121 TMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNS 180
Query: 181 LDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQDLY 216
LDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQDLY
Sbjct: 181 LDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQDLY 216
>gi|4503647 coagulation factor VIII isoform a precursor [Homo sapiens]
Length = 2351
Score = 429 bits (1104), Expect = e-121
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 9 VFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESKA 68
VFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESKA
Sbjct: 2144 VFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESKA 2203
Query: 69 ISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVT 128
ISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVT
Sbjct: 2204 ISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVT 2263
Query: 129 TQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPPLLTR 188
TQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPPLLTR
Sbjct: 2264 TQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPPLLTR 2323
Query: 189 YLRIHPQSWVHQIALRMEVLGCEAQDLY 216
YLRIHPQSWVHQIALRMEVLGCEAQDLY
Sbjct: 2324 YLRIHPQSWVHQIALRMEVLGCEAQDLY 2351
Score = 121 bits (304), Expect = 4e-28
Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 8/158 (5%)
Query: 56 NSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQ 115
N C PLGM S I D QITAS + W+P ARLH G NAW P W++
Sbjct: 2038 NKCQTPLGMASGHIRDFQITASG----QYGQWAPKLARLHYSGSINAW--STKEPFSWIK 2091
Query: 116 VDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQN--GKVKVFQGNQDS 173
VD M + G+ TQG + +S+Y+ +F+I S DG +W + N G + VF GN DS
Sbjct: 2092 VDLLAPMIIHGIKTQGARQKFSSLYISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDS 2151
Query: 174 FTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCE 211
N +PP++ RY+R+HP + + LRME++GC+
Sbjct: 2152 SGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCD 2189
Score = 47.8 bits (112), Expect = 7e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCD 54
KVF GN DS N +PP++ RY+R+HP + + LRME++GC+
Sbjct: 2300 KVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCE 2346
>gi|105990535 coagulation factor V precursor [Homo sapiens]
Length = 2224
Score = 198 bits (503), Expect = 3e-51
Identities = 95/205 (46%), Positives = 138/205 (67%), Gaps = 3/205 (1%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESKAI 69
F GN D+S IK N F+PPI+ARYIR+ PT R TLR+EL GC++N CS PLGME+ I
Sbjct: 2018 FNGNSDASTIKENQFDPPIVARYIRISPTRAYNRPTLRLELQGCEVNGCSTPLGMENGKI 2077
Query: 70 SDAQITASSYFTNMFAT-WSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVT 128
+ QITASS+ + + W P +ARL+ QGR NAW+ + NN K+WL++D K K+T +
Sbjct: 2078 ENKQITASSFKKSWWGDYWEPFRARLNAQGRVNAWQAKANNNKQWLEIDLLKIKKITAII 2137
Query: 129 TQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKV--KVFQGNQDSFTPVVNSLDPPLL 186
TQG KSL + MYVK + I S+ G +W + + K+F+GN ++ V N +PP++
Sbjct: 2138 TQGCKSLSSEMYVKSYTIHYSEQGVEWKPYRLKSSMVDKIFEGNTNTKGHVKNFFNPPII 2197
Query: 187 TRYLRIHPQSWVHQIALRMEVLGCE 211
+R++R+ P++W IALR+E+ GC+
Sbjct: 2198 SRFIRVIPKTWNQSIALRLELFGCD 2222
Score = 113 bits (282), Expect = 1e-25
Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNP----KEW 113
C MP+G+ + ISD+QI AS + W P ARL+ G NAW + K W
Sbjct: 1907 CRMPMGLSTGIISDSQIKASEFL----GYWEPRLARLNNGGSYNAWSVEKLAAEFASKPW 1962
Query: 114 LQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNG--KVKVFQGNQ 171
+QVD QK + +TG+ TQG K L S Y EF ++ S + W +F N V F GN
Sbjct: 1963 IQVDMQKEVIITGIQTQGAKHYLKSCYTTEFYVAYSSNQINWQIFKGNSTRNVMYFNGNS 2022
Query: 172 DSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCE 211
D+ T N DPP++ RY+RI P ++ LR+E+ GCE
Sbjct: 2023 DASTIKENQFDPPIVARYIRISPTRAYNRPTLRLELQGCE 2062
Score = 52.8 bits (125), Expect = 2e-07
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDL 55
K+F GN ++ G N FNPPII+R+IR+ P ++ LR+EL GCD+
Sbjct: 2176 KIFEGNTNTKGHVKNFFNPPIISRFIRVIPKTWNQSIALRLELFGCDI 2223
>gi|31317224 EGF-like repeats and discoidin I-like
domains-containing protein 3 [Homo sapiens]
Length = 480
Score = 183 bits (465), Expect = 8e-47
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 5/211 (2%)
Query: 9 VFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESKA 68
VF GN+D++ N F PPI A+Y+RL+P TLRMEL+GC+L+ CS PLGM+S
Sbjct: 270 VFRGNIDNNTPYANSFTPPIKAQYVRLYPQVCRRHCTLRMELLGCELSGCSEPLGMKSGH 329
Query: 69 ISDAQITASSYFTNM---FATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVT 125
I D QITASS F + TW P KARL QG+ NAW N+ +WLQVD KVT
Sbjct: 330 IQDYQITASSIFRTLNMDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQVDLLVPTKVT 389
Query: 126 GVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLF--FQNGKVKVFQGNQDSFTPVVNSLDP 183
G+ TQG K +V + ++ S DG WT++ + K KVFQGN D+ T N +DP
Sbjct: 390 GIITQGAKDFGHVQFVGSYKLAYSNDGEHWTVYQDEKQRKDKVFQGNFDNDTHRKNVIDP 449
Query: 184 PLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
P+ R++RI P SW +I LR E+LGC ++
Sbjct: 450 PIYARHIRILPWSWYGRITLRSELLGCTEEE 480
Score = 129 bits (324), Expect = 2e-30
Identities = 71/168 (42%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Query: 49 ELMGCDLN-SCSMPLGMESKAISDAQITASSYFTNMFAT--WSPSKARLHLQGRSNAWRP 105
E MG + CS PLG+E IS+ QITASS +F W P ARL+ +G NAW
Sbjct: 148 EFMGRNCQYKCSGPLGIEGGIISNQQITASSTHRALFGLQKWYPYYARLNKKGLINAWTA 207
Query: 106 QVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNG--K 163
N+ W+Q++ Q+ M+VTGV TQG K + + Y+K + I+ S DG W ++ G +
Sbjct: 208 AENDRWPWIQINLQRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGKTWAMYKVKGTNE 267
Query: 164 VKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCE 211
VF+GN D+ TP NS PP+ +Y+R++PQ LRME+LGCE
Sbjct: 268 DMVFRGNIDNNTPYANSFTPPIKAQYVRLYPQVCRRHCTLRMELLGCE 315
Score = 48.9 bits (115), Expect = 3e-06
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 4 QDPGKVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGC 53
Q KVF GN D+ + N+ +PPI AR+IR+ P + R TLR EL+GC
Sbjct: 427 QRKDKVFQGNFDNDTHRKNVIDPPIYARHIRILPWSWYGRITLRSELLGC 476
>gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Homo
sapiens]
Length = 387
Score = 167 bits (422), Expect = 8e-42
Identities = 84/208 (40%), Positives = 126/208 (60%), Gaps = 5/208 (2%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESK 67
K F GN + + + N+F P+ A+Y+RL+PT TLR EL+GC+LN C+ PLG+++
Sbjct: 180 KEFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNN 239
Query: 68 AISDAQITASSYFTNM---FATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKV 124
+I D QITASS + +W+PS ARL QG NAW +WLQVD + +V
Sbjct: 240 SIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEV 299
Query: 125 TGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFF--QNGKVKVFQGNQDSFTPVVNSLD 182
TG+ TQG ++ + +V + ++ S D WT + + G K+F GN D+ + N +
Sbjct: 300 TGIITQGARNFGSVQFVASYKVAYSNDSANWTEYQDPRTGSSKIFPGNWDNHSHKKNLFE 359
Query: 183 PPLLTRYLRIHPQSWVHQIALRMEVLGC 210
P+L RY+RI P +W ++IALR+E+LGC
Sbjct: 360 TPILARYVRILPVAWHNRIALRLELLGC 387
Score = 106 bits (265), Expect = 1e-23
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFAT--WSPSKARLHLQGRSNAWRPQVNNPKEWLQ 115
C PLG+E+ I+++QI ASS W P ARL+ G NAW P N+ W+Q
Sbjct: 70 CVEPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPSSNDDNPWIQ 129
Query: 116 VDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQ-NGKVKVFQGNQDSF 174
V+ + M VTGV TQG L + Y+K F ++ S +GH++ N K K F GN +
Sbjct: 130 VNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKEFVGNWNKN 189
Query: 175 TPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCE 211
VN + P+ +Y+R++P S LR E+LGCE
Sbjct: 190 AVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCE 226
>gi|41872572 neuropilin 2 isoform 3 precursor [Homo sapiens]
Length = 909
Score = 128 bits (321), Expect = 4e-30
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C++PLGMES I++ QI+ASS +++ W+P ++RLH G N W P +++ KE+LQVD
Sbjct: 277 CNVPLGMESGRIANEQISASSTYSD--GRWTPQQSRLH--GDDNGWTPNLDSNKEYLQVD 332
Query: 118 FQKTMKVTGVTTQGVKSLLTS--MYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
+ +T + TQG S T YVK + + S +G W ++ KVFQ N D+
Sbjct: 333 LRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATE 392
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
V+N L PLLTR++RI PQ+W IALR+E+ GC D
Sbjct: 393 VVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTD 431
Score = 114 bits (285), Expect = 6e-26
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 20/221 (9%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGME 65
KVF N D++ + N + P++ R++R+ P + LR+EL GC + CS LGM
Sbjct: 382 KVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTDAPCSNMLGML 441
Query: 66 SKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWR--PQVNNPKEWLQVDFQKTMK 123
S I+D+QI+ASS WSPS ARL + RS + PQ +EWLQVD
Sbjct: 442 SGLIADSQISASS---TQEYLWSPSAARL-VSSRSGWFPRIPQAQPGEEWLQVDLGTPKT 497
Query: 124 VTGVTTQG------VKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKV---KVFQGNQDSF 174
V GV QG + ++ +V++F +S S +G W + Q+ + K+F+GN
Sbjct: 498 VKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWE-YIQDPRTQQPKLFEGNMHYD 556
Query: 175 TPVVNSLDPPLLTRYLRIHPQSWVHQ-IALRMEVLGCEAQD 214
TP + D P+ +Y+R++P+ W I +R+EVLGC+ D
Sbjct: 557 TPDIRRFD-PIPAQYVRVYPERWSPAGIGMRLEVLGCDWTD 596
>gi|41872567 neuropilin 2 isoform 5 precursor [Homo sapiens]
Length = 901
Score = 128 bits (321), Expect = 4e-30
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C++PLGMES I++ QI+ASS +++ W+P ++RLH G N W P +++ KE+LQVD
Sbjct: 277 CNVPLGMESGRIANEQISASSTYSD--GRWTPQQSRLH--GDDNGWTPNLDSNKEYLQVD 332
Query: 118 FQKTMKVTGVTTQGVKSLLTS--MYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
+ +T + TQG S T YVK + + S +G W ++ KVFQ N D+
Sbjct: 333 LRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATE 392
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
V+N L PLLTR++RI PQ+W IALR+E+ GC D
Sbjct: 393 VVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTD 431
Score = 114 bits (285), Expect = 6e-26
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 20/221 (9%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGME 65
KVF N D++ + N + P++ R++R+ P + LR+EL GC + CS LGM
Sbjct: 382 KVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTDAPCSNMLGML 441
Query: 66 SKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWR--PQVNNPKEWLQVDFQKTMK 123
S I+D+QI+ASS WSPS ARL + RS + PQ +EWLQVD
Sbjct: 442 SGLIADSQISASS---TQEYLWSPSAARL-VSSRSGWFPRIPQAQPGEEWLQVDLGTPKT 497
Query: 124 VTGVTTQG------VKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKV---KVFQGNQDSF 174
V GV QG + ++ +V++F +S S +G W + Q+ + K+F+GN
Sbjct: 498 VKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWE-YIQDPRTQQPKLFEGNMHYD 556
Query: 175 TPVVNSLDPPLLTRYLRIHPQSWVHQ-IALRMEVLGCEAQD 214
TP + D P+ +Y+R++P+ W I +R+EVLGC+ D
Sbjct: 557 TPDIRRFD-PIPAQYVRVYPERWSPAGIGMRLEVLGCDWTD 596
>gi|41872562 neuropilin 2 isoform 1 precursor [Homo sapiens]
Length = 931
Score = 128 bits (321), Expect = 4e-30
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C++PLGMES I++ QI+ASS +++ W+P ++RLH G N W P +++ KE+LQVD
Sbjct: 277 CNVPLGMESGRIANEQISASSTYSD--GRWTPQQSRLH--GDDNGWTPNLDSNKEYLQVD 332
Query: 118 FQKTMKVTGVTTQGVKSLLTS--MYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
+ +T + TQG S T YVK + + S +G W ++ KVFQ N D+
Sbjct: 333 LRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATE 392
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
V+N L PLLTR++RI PQ+W IALR+E+ GC D
Sbjct: 393 VVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTD 431
Score = 114 bits (285), Expect = 6e-26
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 20/221 (9%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGME 65
KVF N D++ + N + P++ R++R+ P + LR+EL GC + CS LGM
Sbjct: 382 KVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTDAPCSNMLGML 441
Query: 66 SKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWR--PQVNNPKEWLQVDFQKTMK 123
S I+D+QI+ASS WSPS ARL + RS + PQ +EWLQVD
Sbjct: 442 SGLIADSQISASS---TQEYLWSPSAARL-VSSRSGWFPRIPQAQPGEEWLQVDLGTPKT 497
Query: 124 VTGVTTQG------VKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKV---KVFQGNQDSF 174
V GV QG + ++ +V++F +S S +G W + Q+ + K+F+GN
Sbjct: 498 VKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWE-YIQDPRTQQPKLFEGNMHYD 556
Query: 175 TPVVNSLDPPLLTRYLRIHPQSWVHQ-IALRMEVLGCEAQD 214
TP + D P+ +Y+R++P+ W I +R+EVLGC+ D
Sbjct: 557 TPDIRRFD-PIPAQYVRVYPERWSPAGIGMRLEVLGCDWTD 596
>gi|41872557 neuropilin 2 isoform 6 precursor [Homo sapiens]
Length = 555
Score = 128 bits (321), Expect = 4e-30
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C++PLGMES I++ QI+ASS +++ W+P ++RLH G N W P +++ KE+LQVD
Sbjct: 277 CNVPLGMESGRIANEQISASSTYSD--GRWTPQQSRLH--GDDNGWTPNLDSNKEYLQVD 332
Query: 118 FQKTMKVTGVTTQGVKSLLTS--MYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
+ +T + TQG S T YVK + + S +G W ++ KVFQ N D+
Sbjct: 333 LRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATE 392
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
V+N L PLLTR++RI PQ+W IALR+E+ GC D
Sbjct: 393 VVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTD 431
Score = 84.0 bits (206), Expect = 9e-17
Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGME 65
KVF N D++ + N + P++ R++R+ P + LR+EL GC + CS LGM
Sbjct: 382 KVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTDAPCSNMLGML 441
Query: 66 SKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWR--PQVNNPKEWLQVDFQKTMK 123
S I+D+QI+ASS WSPS ARL + RS + PQ +EWLQVD
Sbjct: 442 SGLIADSQISASS---TQEYLWSPSAARL-VSSRSGWFPRIPQAQPGEEWLQVDLGTPKT 497
Query: 124 VTGVTTQG------VKSLLTSMYVKEFLISSSQDGHQW 155
V GV QG + ++ +V++F +S S +G W
Sbjct: 498 VKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDW 535
>gi|41872544 neuropilin 2 isoform 4 precursor [Homo sapiens]
Length = 906
Score = 128 bits (321), Expect = 4e-30
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C++PLGMES I++ QI+ASS +++ W+P ++RLH G N W P +++ KE+LQVD
Sbjct: 277 CNVPLGMESGRIANEQISASSTYSD--GRWTPQQSRLH--GDDNGWTPNLDSNKEYLQVD 332
Query: 118 FQKTMKVTGVTTQGVKSLLTS--MYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
+ +T + TQG S T YVK + + S +G W ++ KVFQ N D+
Sbjct: 333 LRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATE 392
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
V+N L PLLTR++RI PQ+W IALR+E+ GC D
Sbjct: 393 VVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTD 431
Score = 114 bits (285), Expect = 6e-26
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 20/221 (9%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGME 65
KVF N D++ + N + P++ R++R+ P + LR+EL GC + CS LGM
Sbjct: 382 KVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTDAPCSNMLGML 441
Query: 66 SKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWR--PQVNNPKEWLQVDFQKTMK 123
S I+D+QI+ASS WSPS ARL + RS + PQ +EWLQVD
Sbjct: 442 SGLIADSQISASS---TQEYLWSPSAARL-VSSRSGWFPRIPQAQPGEEWLQVDLGTPKT 497
Query: 124 VTGVTTQG------VKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKV---KVFQGNQDSF 174
V GV QG + ++ +V++F +S S +G W + Q+ + K+F+GN
Sbjct: 498 VKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWE-YIQDPRTQQPKLFEGNMHYD 556
Query: 175 TPVVNSLDPPLLTRYLRIHPQSWVHQ-IALRMEVLGCEAQD 214
TP + D P+ +Y+R++P+ W I +R+EVLGC+ D
Sbjct: 557 TPDIRRFD-PIPAQYVRVYPERWSPAGIGMRLEVLGCDWTD 596
>gi|41872533 neuropilin 2 isoform 2 precursor [Homo sapiens]
Length = 926
Score = 128 bits (321), Expect = 4e-30
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C++PLGMES I++ QI+ASS +++ W+P ++RLH G N W P +++ KE+LQVD
Sbjct: 277 CNVPLGMESGRIANEQISASSTYSD--GRWTPQQSRLH--GDDNGWTPNLDSNKEYLQVD 332
Query: 118 FQKTMKVTGVTTQGVKSLLTS--MYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
+ +T + TQG S T YVK + + S +G W ++ KVFQ N D+
Sbjct: 333 LRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATE 392
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
V+N L PLLTR++RI PQ+W IALR+E+ GC D
Sbjct: 393 VVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTD 431
Score = 114 bits (285), Expect = 6e-26
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 20/221 (9%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGME 65
KVF N D++ + N + P++ R++R+ P + LR+EL GC + CS LGM
Sbjct: 382 KVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTDAPCSNMLGML 441
Query: 66 SKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWR--PQVNNPKEWLQVDFQKTMK 123
S I+D+QI+ASS WSPS ARL + RS + PQ +EWLQVD
Sbjct: 442 SGLIADSQISASS---TQEYLWSPSAARL-VSSRSGWFPRIPQAQPGEEWLQVDLGTPKT 497
Query: 124 VTGVTTQG------VKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKV---KVFQGNQDSF 174
V GV QG + ++ +V++F +S S +G W + Q+ + K+F+GN
Sbjct: 498 VKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWE-YIQDPRTQQPKLFEGNMHYD 556
Query: 175 TPVVNSLDPPLLTRYLRIHPQSWVHQ-IALRMEVLGCEAQD 214
TP + D P+ +Y+R++P+ W I +R+EVLGC+ D
Sbjct: 557 TPDIRRFD-PIPAQYVRVYPERWSPAGIGMRLEVLGCDWTD 596
>gi|54792129 discoidin, CUB and LCCL domain containing 2 [Homo
sapiens]
Length = 775
Score = 120 bits (301), Expect = 9e-28
Identities = 66/178 (37%), Positives = 97/178 (54%), Gaps = 9/178 (5%)
Query: 41 SIRSTLRMELMGCDLNSCSMPLGMESKAISDAQITASSYF-----TNMFATWSPSKARLH 95
S+ L L + C LGMES I+D QITASS T +W P KARL
Sbjct: 275 SVVGHLSTSLFTFKTSGCYGTLGMESGVIADPQITASSVLEWTDHTGQENSWKPKKARLK 334
Query: 96 LQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQW 155
G W + +WLQ+D K K+TG+ T G + + YV + I S DG +W
Sbjct: 335 KPGPP--WAAFATDEYQWLQIDLNKEKKITGIITTGSTMVEHNYYVSAYRILYSDDGQKW 392
Query: 156 TLFFQNG--KVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCE 211
T++ + G + K+FQGN+D V N+ PP++ R++R++P W +IA++ME+LGC+
Sbjct: 393 TVYREPGVEQDKIFQGNKDYHQDVRNNFLPPIIARFIRVNPTQWQQKIAMKMELLGCQ 450
Score = 48.9 bits (115), Expect = 3e-06
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 4 QDPG----KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGC 53
++PG K+F GN D N F PPIIAR+IR++PT + + ++MEL+GC
Sbjct: 396 REPGVEQDKIFQGNKDYHQDVRNNFLPPIIARFIRVNPTQWQQKIAMKMELLGC 449
>gi|167830477 milk fat globule-EGF factor 8 protein isoform b [Homo
sapiens]
Length = 335
Score = 117 bits (294), Expect = 6e-27
Identities = 69/206 (33%), Positives = 99/206 (48%), Gaps = 53/206 (25%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESK 67
K F GN + + + N+F P+ A+Y+RL+PT TLR EL+GC+LN C+ PLG+++
Sbjct: 180 KEFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNN 239
Query: 68 AISDAQITASSYFTNM---FATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKV 124
+I D QITASS + +W+PS ARL QG NAW +WLQ
Sbjct: 240 SIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQ--------- 290
Query: 125 TGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPP 184
+F GN D+ + N + P
Sbjct: 291 -----------------------------------------IFPGNWDNHSHKKNLFETP 309
Query: 185 LLTRYLRIHPQSWVHQIALRMEVLGC 210
+L RY+RI P +W ++IALR+E+LGC
Sbjct: 310 ILARYVRILPVAWHNRIALRLELLGC 335
Score = 106 bits (265), Expect = 1e-23
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFAT--WSPSKARLHLQGRSNAWRPQVNNPKEWLQ 115
C PLG+E+ I+++QI ASS W P ARL+ G NAW P N+ W+Q
Sbjct: 70 CVEPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPSSNDDNPWIQ 129
Query: 116 VDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQ-NGKVKVFQGNQDSF 174
V+ + M VTGV TQG L + Y+K F ++ S +GH++ N K K F GN +
Sbjct: 130 VNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKEFVGNWNKN 189
Query: 175 TPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCE 211
VN + P+ +Y+R++P S LR E+LGCE
Sbjct: 190 AVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCE 226
>gi|66864913 neuropilin 1 isoform c [Homo sapiens]
Length = 609
Score = 113 bits (283), Expect = 1e-25
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 9 VFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGMES 66
+F GN + + + +F P+I R++R+ P + ++R E+ GC + CS LGM S
Sbjct: 380 LFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDYPCSGMLGMVS 439
Query: 67 KAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNP-KEWLQVDFQKTMKVT 125
ISD+QIT+S+ W P RL A P ++ EWLQ+D + V
Sbjct: 440 GLISDSQITSSNQGDR---NWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVR 496
Query: 126 GVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNG--KVKVFQGNQDSFTPVVNSLDP 183
G+ QG K +++++F I S +G W + + K K F+GN + TP + + P
Sbjct: 497 GIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTF-P 555
Query: 184 PLLTRYLRIHPQSWVH-QIALRMEVLGCEAQ 213
L TR++RI+P+ H + LRME+LGCE +
Sbjct: 556 ALSTRFIRIYPERATHGGLGLRMELLGCEVE 586
Score = 103 bits (257), Expect = 1e-22
Identities = 62/159 (38%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C LGMES I QITASS ++ WS ++RL+ N W P ++ +EW+QVD
Sbjct: 275 CMEALGMESGEIHSDQITASSQYST---NWSAERSRLNYP--ENGWTPGEDSYREWIQVD 329
Query: 118 FQKTMKVTGVTTQGVKSLLTSM--YVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
VT V TQG S T YVK + I S +G W + K +FQGN +
Sbjct: 330 LGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTD 389
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
VV PL+TR++RI P +W I++R EV GC+ D
Sbjct: 390 VVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITD 428
Score = 32.7 bits (73), Expect = 0.24
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 26 PPIIARYIRLHP---THYSIRSTLRMELMGCDLNSCSMPLGMESKAISDAQI 74
P + R+IR++P TH + LRMEL+GC++ + L E + D+ I
Sbjct: 555 PALSTRFIRIYPERATHGGLG--LRMELLGCEVEGGTTVLATEKPTVIDSTI 604
>gi|66912178 neuropilin 1 isoform b [Homo sapiens]
Length = 644
Score = 113 bits (283), Expect = 1e-25
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 9 VFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGMES 66
+F GN + + + +F P+I R++R+ P + ++R E+ GC + CS LGM S
Sbjct: 380 LFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDYPCSGMLGMVS 439
Query: 67 KAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNP-KEWLQVDFQKTMKVT 125
ISD+QIT+S+ W P RL A P ++ EWLQ+D + V
Sbjct: 440 GLISDSQITSSNQGDR---NWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVR 496
Query: 126 GVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNG--KVKVFQGNQDSFTPVVNSLDP 183
G+ QG K +++++F I S +G W + + K K F+GN + TP + + P
Sbjct: 497 GIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTF-P 555
Query: 184 PLLTRYLRIHPQSWVH-QIALRMEVLGCEAQ 213
L TR++RI+P+ H + LRME+LGCE +
Sbjct: 556 ALSTRFIRIYPERATHGGLGLRMELLGCEVE 586
Score = 103 bits (257), Expect = 1e-22
Identities = 62/159 (38%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C LGMES I QITASS ++ WS ++RL+ N W P ++ +EW+QVD
Sbjct: 275 CMEALGMESGEIHSDQITASSQYST---NWSAERSRLNYP--ENGWTPGEDSYREWIQVD 329
Query: 118 FQKTMKVTGVTTQGVKSLLTSM--YVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
VT V TQG S T YVK + I S +G W + K +FQGN +
Sbjct: 330 LGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTD 389
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
VV PL+TR++RI P +W I++R EV GC+ D
Sbjct: 390 VVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITD 428
Score = 28.1 bits (61), Expect = 5.9
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Query: 26 PPIIARYIRLHP---THYSIRSTLRMELMGCDLNS 57
P + R+IR++P TH + LRMEL+GC++ +
Sbjct: 555 PALSTRFIRIYPERATHGGLG--LRMELLGCEVEA 587
>gi|182508169 neuropilin 1 isoform a [Homo sapiens]
Length = 923
Score = 113 bits (283), Expect = 1e-25
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 9 VFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNS--CSMPLGMES 66
+F GN + + + +F P+I R++R+ P + ++R E+ GC + CS LGM S
Sbjct: 380 LFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDYPCSGMLGMVS 439
Query: 67 KAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNP-KEWLQVDFQKTMKVT 125
ISD+QIT+S+ W P RL A P ++ EWLQ+D + V
Sbjct: 440 GLISDSQITSSNQGDR---NWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVR 496
Query: 126 GVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNG--KVKVFQGNQDSFTPVVNSLDP 183
G+ QG K +++++F I S +G W + + K K F+GN + TP + + P
Sbjct: 497 GIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTF-P 555
Query: 184 PLLTRYLRIHPQSWVH-QIALRMEVLGCEAQ 213
L TR++RI+P+ H + LRME+LGCE +
Sbjct: 556 ALSTRFIRIYPERATHGGLGLRMELLGCEVE 586
Score = 103 bits (257), Expect = 1e-22
Identities = 62/159 (38%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C LGMES I QITASS ++ WS ++RL+ N W P ++ +EW+QVD
Sbjct: 275 CMEALGMESGEIHSDQITASSQYST---NWSAERSRLNYP--ENGWTPGEDSYREWIQVD 329
Query: 118 FQKTMKVTGVTTQGVKSLLTSM--YVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFT 175
VT V TQG S T YVK + I S +G W + K +FQGN +
Sbjct: 330 LGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTD 389
Query: 176 PVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQD 214
VV PL+TR++RI P +W I++R EV GC+ D
Sbjct: 390 VVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITD 428
Score = 28.1 bits (61), Expect = 5.9
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Query: 26 PPIIARYIRLHP---THYSIRSTLRMELMGCDLNS 57
P + R+IR++P TH + LRMEL+GC++ +
Sbjct: 555 PALSTRFIRIYPERATHGGLG--LRMELLGCEVEA 587
>gi|27735143 discoidin, CUB and LCCL domain containing 1 [Homo
sapiens]
Length = 539
Score = 110 bits (275), Expect = 9e-25
Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 13/165 (7%)
Query: 56 NSCSMPLGMESKAISDAQITASSYFTNMFAT-----WSPSKARLHLQGRSNAWRPQVNN- 109
N CS L E D QI ASS + ++ + WSP +ARL QG S A NN
Sbjct: 253 NGCSRSLSFEP----DGQIRASSSWQSVNESGDQVHWSPGQARLQDQGPSWASGDSSNNH 308
Query: 110 -PKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLF--FQNGKVKV 166
P+EWL++D + K+TG+ T G + YVK F+++ + +W + N + KV
Sbjct: 309 KPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKV 368
Query: 167 FQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCE 211
FQGN + PV N+ PP++ RY+R+ PQ+W +IAL++E++GC+
Sbjct: 369 FQGNSNFRDPVQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQ 413
Score = 44.3 bits (103), Expect = 8e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 3 IQDPGKVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDL 55
+ + KVF GN + N F PPI+ARY+R+ P + R L++EL+GC +
Sbjct: 362 VNNEEKVFQGNSNFRDPVQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQI 414
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 102 bits (255), Expect = 2e-22
Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 61 PLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSN-------AWRPQVNNPKEW 113
P+GMES I D QI ASS + + RL++Q + AW + + +W
Sbjct: 387 PIGMESHRIEDNQIRASSMLRHGLGA---QRGRLNMQTGATEDDYYDGAWCAEDDARTQW 443
Query: 114 LQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDS 173
++VD ++T + TGV TQG S + +V F + S D W ++ + F GN D
Sbjct: 444 IEVDTRRTTRFTGVITQGRDSSIHDDFVTTFFVGFSNDSQTWVMYTNGYEEMTFHGNVDK 503
Query: 174 FTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQDLY 216
TPV++ L P++ R++RI+P +W + +R+EVLGC +Y
Sbjct: 504 DTPVLSELPEPVVARFIRIYPLTWNGSLCMRLEVLGCSVAPVY 546
Score = 36.2 bits (82), Expect = 0.022
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDL 55
F GNVD + P++AR+IR++P ++ +R+E++GC +
Sbjct: 497 FHGNVDKDTPVLSELPEPVVARFIRIYPLTWNGSLCMRLEVLGCSV 542
>gi|223005864 carboxypeptidase X (M14 family), member 2 [Homo
sapiens]
Length = 756
Score = 101 bits (252), Expect = 4e-22
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 54 DLNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSN-------AWRPQ 106
D+ PLG+E+ I+D Q+ AS+ + RL++Q N AW
Sbjct: 131 DVRESCPPLGLETLKITDFQLHASTVKRYGLGA---HRGRLNIQAGINENDFYDGAWCAG 187
Query: 107 VNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKV 166
N+ ++W++VD ++ + TGV TQG SL S +V + + S D H W +
Sbjct: 188 RNDLQQWIEVDARRLTRFTGVITQGRNSLWLSDWVTSYKVMVSNDSHTWVTVKNGSGDMI 247
Query: 167 FQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVH--QIALRMEVLGCEAQD 214
F+GN + PV+N L P++ RY+RI+PQSW I +RME+LGC D
Sbjct: 248 FEGNSEKEIPVLNELPVPMVARYIRINPQSWFDNGSICMRMEILGCPLPD 297
Score = 32.7 bits (73), Expect = 0.24
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 9 VFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST--LRMELMGCDL 55
+F GN + N P++ARYIR++P + + +RME++GC L
Sbjct: 247 IFEGNSEKEIPVLNELPVPMVARYIRINPQSWFDNGSICMRMEILGCPL 295
>gi|10835083 X-linked juvenile retinoschisis protein precursor [Homo
sapiens]
Length = 224
Score = 95.9 bits (237), Expect = 2e-20
Identities = 50/154 (32%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
Query: 61 PLGMESKAISDAQITASS--YFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDF 118
PLG ES ++ QIT S+ + +++W+ +KARL+ QG AW + + +WLQ+D
Sbjct: 68 PLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDL 127
Query: 119 QKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFF--QNGKVKVFQGNQDSFTP 176
++ ++G+ TQG + ++ ++ + D +++ Q G +VF GN D +
Sbjct: 128 KEIKVISGILTQGRCDI--DEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNSDRTST 185
Query: 177 VVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGC 210
V N L PP+++R++R+ P W +IA+RME+L C
Sbjct: 186 VQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
Score = 50.1 bits (118), Expect = 1e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGC 53
+VF+GN D + N+ PPII+R+IRL P + +R +RMEL+ C
Sbjct: 174 RVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo
sapiens]
Length = 1331
Score = 84.0 bits (206), Expect = 9e-17
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C PL +S A S +++ ++SP A+++ +G + W P ++ +WLQVD
Sbjct: 35 CDEPL------VSGLPHVAFSSSSSISGSYSPGYAKINKRGGAGGWSPSDSDHYQWLQVD 88
Query: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
F +++ + TQG S +S +V ++ + S G W + Q+G + F GN +S V
Sbjct: 89 FGNRKQISAIATQGRYS--SSDWVTQYRMLYSDTGRNWKPYHQDGNIWAFPGNINSDGVV 146
Query: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
+ L P++ RY+RI P W +I LR+EV GC
Sbjct: 147 RHELQHPIIARYVRIVPLDWNGEGRIGLRIEVYGC 181
Score = 37.4 bits (85), Expect = 0.010
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYS--IRSTLRMELMGC 53
F GN++S G+ + PIIARY+R+ P ++ R LR+E+ GC
Sbjct: 136 FPGNINSDGVVRHELQHPIIARYVRIVPLDWNGEGRIGLRIEVYGC 181
>gi|9994201 carboxypeptidase X, member 1 precursor [Homo sapiens]
Length = 734
Score = 82.4 bits (202), Expect = 3e-16
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 61 PLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGR-------SNAWRPQVNNPKEW 113
PLG+ES +SD+++ ASS + F P + RL++Q AW + + W
Sbjct: 117 PLGLESLRVSDSRLEASS--SQSFGL-GPHRGRLNIQSGLEDGDLYDGAWCAEEQDADPW 173
Query: 114 LQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQW--TLFFQNGKVKVFQGNQ 171
QVD + +GV TQG S+ +V + + S D W + +G VF N
Sbjct: 174 FQVDAGHPTRFSGVITQGRNSVWRYDWVTSYKVQFSNDSRTWWGSRNHSSGMDAVFPANS 233
Query: 172 DSFTPVVNSLDPPLLTRYLRIHPQSWVHQIA--LRMEVLGCEAQD 214
D TPV+N L P + R++R+ PQ+W+ A LR E+L C D
Sbjct: 234 DPETPVLNLLPEPQVARFIRLLPQTWLQGGAPCLRAEILACPVSD 278
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo
sapiens]
Length = 1235
Score = 80.1 bits (196), Expect = 1e-15
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C PL A+ A ++SS + ++ P ARL+ + + W P V+N +WLQ+D
Sbjct: 6 CDDPL---VSALPQASFSSSS---ELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQID 59
Query: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
+ M+VT V TQG +S +V +L+ S G W + Q + F GN ++ + V
Sbjct: 60 LGERMEVTAVATQG--GYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVV 117
Query: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
L P + R+LR P W +I +R+EV GC
Sbjct: 118 YYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGC 152
Score = 28.9 bits (63), Expect = 3.5
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSI--RSTLRMELMGCDLNS 57
F GN ++ + + P I AR++R P ++ R +R+E+ GC S
Sbjct: 107 FSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRS 156
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo
sapiens]
Length = 1308
Score = 80.1 bits (196), Expect = 1e-15
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C PL A+ A ++SS + ++ P ARL+ + + W P V+N +WLQ+D
Sbjct: 31 CDDPL---VSALPQASFSSSS---ELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQID 84
Query: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
+ M+VT V TQG +S +V +L+ S G W + Q + F GN ++ + V
Sbjct: 85 LGERMEVTAVATQG--GYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVV 142
Query: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
L P + R+LR P W +I +R+EV GC
Sbjct: 143 YYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGC 177
Score = 28.9 bits (63), Expect = 3.5
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSI--RSTLRMELMGCDLNS 57
F GN ++ + + P I AR++R P ++ R +R+E+ GC S
Sbjct: 132 FSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRS 181
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 77.4 bits (189), Expect = 9e-15
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C PL + A+ + ++SS + ++ P +RL+ + + W P V+N +WLQ+D
Sbjct: 31 CDSPL---ASALPRSSFSSSS---ELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQID 84
Query: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
+ M+VT V TQG +S +V +L+ S G W + + + F GN ++ + V
Sbjct: 85 LGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVV 142
Query: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
L PP R+LR P +W +I +R+EV GC
Sbjct: 143 HYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
Score = 32.0 bits (71), Expect = 0.41
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST--LRMELMGCDLNS 57
F GN ++ + H PP AR++R P ++ R +R+E+ GC S
Sbjct: 132 FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYKS 181
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 77.4 bits (189), Expect = 9e-15
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C PL + A+ + ++SS + ++ P +RL+ + + W P V+N +WLQ+D
Sbjct: 31 CDSPL---ASALPRSSFSSSS---ELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQID 84
Query: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
+ M+VT V TQG +S +V +L+ S G W + + + F GN ++ + V
Sbjct: 85 LGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVV 142
Query: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
L PP R+LR P +W +I +R+EV GC
Sbjct: 143 HYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
Score = 32.0 bits (71), Expect = 0.41
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST--LRMELMGCDLNS 57
F GN ++ + H PP AR++R P ++ R +R+E+ GC S
Sbjct: 132 FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYKS 181
>gi|239743729 PREDICTED: similar to contactin associated
protein-like 3B [Homo sapiens]
Length = 380
Score = 77.4 bits (189), Expect = 9e-15
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C PL + A+ + ++SS + ++ P +RL+ + + W P V+N +WLQ+D
Sbjct: 31 CDAPL---ASALPRSSFSSSS---ELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQID 84
Query: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
+ M+VT V TQG +S +V +L+ S G W + + + F GN ++ + V
Sbjct: 85 LGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVV 142
Query: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
L PP R+LR P +W +I +R+EV GC
Sbjct: 143 HYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
Score = 32.0 bits (71), Expect = 0.41
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST--LRMELMGCDLNS 57
F GN ++ + H PP AR++R P ++ R +R+E+ GC S
Sbjct: 132 FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYKS 181
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 77.4 bits (189), Expect = 9e-15
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
C PL + A+ + ++SS + ++ P +RL+ + + W P V+N +WLQ+D
Sbjct: 31 CDAPL---ASALPRSSFSSSS---ELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQID 84
Query: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
+ M+VT V TQG +S +V +L+ S G W + + + F GN ++ + V
Sbjct: 85 LGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVV 142
Query: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
L PP R+LR P +W +I +R+EV GC
Sbjct: 143 HYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
Score = 32.0 bits (71), Expect = 0.41
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST--LRMELMGCDLNS 57
F GN ++ + H PP AR++R P ++ R +R+E+ GC S
Sbjct: 132 FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYKS 181
>gi|38327632 discoidin domain receptor family, member 1 isoform b
[Homo sapiens]
Length = 876
Score = 73.6 bits (179), Expect = 1e-13
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 54 DLNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSN----AWRPQVN- 108
D C LGM+ + I D+ I+ASS +WS S A H + S+ AW P +
Sbjct: 27 DPAKCRYALGMQDRTIPDSDISASS-------SWSDSTAARHSRLESSDGDGAWCPAGSV 79
Query: 109 --NPKEWLQVDFQKTMKVTGVTTQGVKSL-LTSMYVKEFLISSSQDGHQWTLFFQNGKVK 165
+E+LQVD Q+ V V TQG + L + + + + S+DG +W + +
Sbjct: 80 FPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQE 139
Query: 166 VFQGNQDSFTPVVNSLDPPLLTRYLRIHPQS-WVHQIALRMEVLGCEAQD 214
V GN+D V+ L PP++ R +R +P++ V + LR+E+ GC +D
Sbjct: 140 VISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWRD 189
Score = 37.4 bits (85), Expect = 0.010
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST-LRMELMGC----DLNSCSMPL 62
+V GN D G+ PP++AR +R +P + S LR+EL GC L S + P+
Sbjct: 139 EVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWRDGLLSYTAPV 198
Query: 63 GMESKAISDAQITASSY 79
G + S+Y
Sbjct: 199 GQTMYLSEAVYLNDSTY 215
>gi|83977452 discoidin domain receptor family, member 1 isoform c
[Homo sapiens]
Length = 919
Score = 73.6 bits (179), Expect = 1e-13
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 54 DLNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSN----AWRPQVN- 108
D C LGM+ + I D+ I+ASS +WS S A H + S+ AW P +
Sbjct: 27 DPAKCRYALGMQDRTIPDSDISASS-------SWSDSTAARHSRLESSDGDGAWCPAGSV 79
Query: 109 --NPKEWLQVDFQKTMKVTGVTTQGVKSL-LTSMYVKEFLISSSQDGHQWTLFFQNGKVK 165
+E+LQVD Q+ V V TQG + L + + + + S+DG +W + +
Sbjct: 80 FPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQE 139
Query: 166 VFQGNQDSFTPVVNSLDPPLLTRYLRIHPQS-WVHQIALRMEVLGCEAQD 214
V GN+D V+ L PP++ R +R +P++ V + LR+E+ GC +D
Sbjct: 140 VISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWRD 189
Score = 37.4 bits (85), Expect = 0.010
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST-LRMELMGC----DLNSCSMPL 62
+V GN D G+ PP++AR +R +P + S LR+EL GC L S + P+
Sbjct: 139 EVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWRDGLLSYTAPV 198
Query: 63 GMESKAISDAQITASSY 79
G + S+Y
Sbjct: 199 GQTMYLSEAVYLNDSTY 215
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,335,816
Number of Sequences: 37866
Number of extensions: 323415
Number of successful extensions: 804
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 615
Number of HSP's gapped (non-prelim): 92
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.