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Search of human proteins with 10190742
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10190742 ubiquitin specific peptidase 29 [Homo sapiens]
(922 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10190742 ubiquitin specific peptidase 29 [Homo sapiens] 1853 0.0
gi|13994268 ubiquitin-specific protease 26 [Homo sapiens] 714 0.0
gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens] 696 0.0
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 81 5e-15
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 81 5e-15
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 81 5e-15
gi|149192845 ubiquitin specific protease 24 [Homo sapiens] 78 4e-14
gi|32698815 ubiquitin thiolesterase 12 [Homo sapiens] 72 2e-12
gi|62243586 ubiquitin-specific protease 21 [Homo sapiens] 68 4e-11
gi|74027267 ubiquitin-specific protease 21 [Homo sapiens] 68 4e-11
gi|45267835 ubiquitin specific protease 50 [Homo sapiens] 67 6e-11
gi|28565285 ubiquitin specific peptidase 2 isoform b [Homo sapiens] 67 8e-11
gi|188528692 ubiquitin specific peptidase 2 isoform a [Homo sapi... 67 8e-11
gi|197116355 ubiquitin specific peptidase 46 isoform 2 [Homo sap... 66 1e-10
gi|31377709 ubiquitin specific peptidase 46 isoform 1 [Homo sapi... 66 1e-10
gi|55770886 ubiquitin thiolesterase 3 [Homo sapiens] 64 8e-10
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 63 1e-09
gi|239742282 PREDICTED: hypothetical protein XP_002342474 [Homo ... 61 5e-09
gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens] 60 9e-09
gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens] 60 9e-09
gi|169217654 PREDICTED: similar to deubiquitinating enzyme DUB1 ... 59 2e-08
gi|239742291 PREDICTED: hypothetical protein XP_002342477 [Homo ... 59 2e-08
gi|239742289 PREDICTED: hypothetical protein XP_002342476 [Homo ... 59 2e-08
gi|239742278 PREDICTED: hypothetical protein XP_002342472 [Homo ... 59 2e-08
gi|24234683 ubiquitin specific peptidase 11 [Homo sapiens] 59 2e-08
gi|239758075 PREDICTED: similar to deubiquitinating enzyme DUB1 ... 59 2e-08
gi|239742297 PREDICTED: hypothetical protein XP_002342480 [Homo ... 59 2e-08
gi|239742287 PREDICTED: hypothetical protein XP_002342475 [Homo ... 59 2e-08
gi|113415490 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... 59 3e-08
gi|113415488 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... 59 3e-08
>gi|10190742 ubiquitin specific peptidase 29 [Homo sapiens]
Length = 922
Score = 1853 bits (4799), Expect = 0.0
Identities = 922/922 (100%), Positives = 922/922 (100%)
Query: 1 MISLKVCGFIQIWSQKTGMTKLKEALIETVQRQKEIKLVVTFKSGKFIRIFQLSNNIRSV 60
MISLKVCGFIQIWSQKTGMTKLKEALIETVQRQKEIKLVVTFKSGKFIRIFQLSNNIRSV
Sbjct: 1 MISLKVCGFIQIWSQKTGMTKLKEALIETVQRQKEIKLVVTFKSGKFIRIFQLSNNIRSV 60
Query: 61 VLRHCKKRQSHLRLTLKNNVFLFIDKLSYRDAKQLNMFLDIIHQNKSQQPMKSDDDWSVF 120
VLRHCKKRQSHLRLTLKNNVFLFIDKLSYRDAKQLNMFLDIIHQNKSQQPMKSDDDWSVF
Sbjct: 61 VLRHCKKRQSHLRLTLKNNVFLFIDKLSYRDAKQLNMFLDIIHQNKSQQPMKSDDDWSVF 120
Query: 121 ESRNMLKEIDKTSFYSICNKPSYQKMPLFMSKSPTHVKKGILENQGGKGQNTLSSDVQTN 180
ESRNMLKEIDKTSFYSICNKPSYQKMPLFMSKSPTHVKKGILENQGGKGQNTLSSDVQTN
Sbjct: 121 ESRNMLKEIDKTSFYSICNKPSYQKMPLFMSKSPTHVKKGILENQGGKGQNTLSSDVQTN 180
Query: 181 EDILKEDNPVPNKKYKTDSLKYIQSNRKNPSSLEDLEKDRDLKLGPSFNTNCNGNPNLDE 240
EDILKEDNPVPNKKYKTDSLKYIQSNRKNPSSLEDLEKDRDLKLGPSFNTNCNGNPNLDE
Sbjct: 181 EDILKEDNPVPNKKYKTDSLKYIQSNRKNPSSLEDLEKDRDLKLGPSFNTNCNGNPNLDE 240
Query: 241 TVLATQTLNAKNGLTSPLEPEHSQGDPRCNKAQVPLDSHSQQLQQGFPNLGNTCYMNAVL 300
TVLATQTLNAKNGLTSPLEPEHSQGDPRCNKAQVPLDSHSQQLQQGFPNLGNTCYMNAVL
Sbjct: 241 TVLATQTLNAKNGLTSPLEPEHSQGDPRCNKAQVPLDSHSQQLQQGFPNLGNTCYMNAVL 300
Query: 301 QSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISA 360
QSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISA
Sbjct: 301 QSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISA 360
Query: 361 VAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVF 420
VAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVF
Sbjct: 361 VAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVF 420
Query: 421 VCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEE 480
VCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEE
Sbjct: 421 VCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEE 480
Query: 481 ELEYNCQMCKQKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSY 540
ELEYNCQMCKQKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSY
Sbjct: 481 ELEYNCQMCKQKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSY 540
Query: 541 CNESTKPPLPLSSSAPVGKCEVLEVSQEMISEINSPLTPSMKLTSESSDSLVLPVEPDKN 600
CNESTKPPLPLSSSAPVGKCEVLEVSQEMISEINSPLTPSMKLTSESSDSLVLPVEPDKN
Sbjct: 541 CNESTKPPLPLSSSAPVGKCEVLEVSQEMISEINSPLTPSMKLTSESSDSLVLPVEPDKN 600
Query: 601 ADLQRFQRDCGDASQEQHQRDLENGSALESELVHFRDRAIGEKELPVADSLMDQGDISLP 660
ADLQRFQRDCGDASQEQHQRDLENGSALESELVHFRDRAIGEKELPVADSLMDQGDISLP
Sbjct: 601 ADLQRFQRDCGDASQEQHQRDLENGSALESELVHFRDRAIGEKELPVADSLMDQGDISLP 660
Query: 661 VMYEDGGKLISSPDTRLVEVHLQEVPQHPELQKYEKTNTFVEFNFDSVTESTNGFYDCKE 720
VMYEDGGKLISSPDTRLVEVHLQEVPQHPELQKYEKTNTFVEFNFDSVTESTNGFYDCKE
Sbjct: 661 VMYEDGGKLISSPDTRLVEVHLQEVPQHPELQKYEKTNTFVEFNFDSVTESTNGFYDCKE 720
Query: 721 NRIPEGSQGMAEQLQQCIEESIIDEFLQQAPPPGVRKLDAQEHTEETLNQSTELRLQKAD 780
NRIPEGSQGMAEQLQQCIEESIIDEFLQQAPPPGVRKLDAQEHTEETLNQSTELRLQKAD
Sbjct: 721 NRIPEGSQGMAEQLQQCIEESIIDEFLQQAPPPGVRKLDAQEHTEETLNQSTELRLQKAD 780
Query: 781 LNHLGALGSDNPGNKNILDAENTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGH 840
LNHLGALGSDNPGNKNILDAENTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGH
Sbjct: 781 LNHLGALGSDNPGNKNILDAENTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGH 840
Query: 841 YISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFYMHNGIFEELLRKAENSRL 900
YISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFYMHNGIFEELLRKAENSRL
Sbjct: 841 YISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFYMHNGIFEELLRKAENSRL 900
Query: 901 PSTQAGVIPQGEYEGDSLYRPA 922
PSTQAGVIPQGEYEGDSLYRPA
Sbjct: 901 PSTQAGVIPQGEYEGDSLYRPA 922
>gi|13994268 ubiquitin-specific protease 26 [Homo sapiens]
Length = 913
Score = 714 bits (1843), Expect = 0.0
Identities = 429/920 (46%), Positives = 566/920 (61%), Gaps = 31/920 (3%)
Query: 1 MISLKVCGFIQIWSQKTGMTKLKEALIETVQRQKEIKLVVTFKSGKFIRIFQLSNNIRSV 60
M +L + GF+QI + KTG++K KEA IE V+R+K+ +LV+ FKSGK+ F+LS+NI++V
Sbjct: 1 MAALFLRGFVQIGNCKTGISKSKEAFIEAVERKKKDRLVLYFKSGKY-STFRLSDNIQNV 59
Query: 61 VLRHCKKRQSHLRLTLKNNVFLFIDKLSYRDAKQLNMFLDIIHQNKSQQPMKSDDDWSVF 120
VL+ + Q+HL LTL+NN LFI+ LS DA+QL +FLD +HQN+ Q P++ SVF
Sbjct: 60 VLKSYRGNQNHLHLTLQNNNGLFIEGLSSTDAEQLKIFLDRVHQNEVQPPVRPGKGGSVF 119
Query: 121 ESRNMLKEIDKTSFYSICNKPS--------------YQKMPLFMSKSPTHVKKGILENQG 166
S KEI+KTSF+ + K S Q+MPL SK T + ENQ
Sbjct: 120 SSTTQ-KEINKTSFHKVDEKSSSKSFEIAKGSGTGVLQRMPLLTSKL-TLTCGELSENQH 177
Query: 167 GKGQNTLSSDVQTNEDILKEDNPVPNKKYKTDSLKYIQSNRKNPSSLEDLEKDRDLKLGP 226
K + LSS + NE+ LKE+N V KK K D + + NR+ L++LE+++ L+
Sbjct: 178 KKRKRMLSSSSEMNEEFLKENNSVEYKKSKADCSRCVSYNREKQLKLKELEENKKLECES 237
Query: 227 SFNTNCNGNPNLDETVLATQTLNAKNGLTSPLEPEHSQGDPRCNKAQVPLDSHSQQLQQG 286
S N GNP LD+ L Q L K L L+ +S G + +K ++ + +++ G
Sbjct: 238 SCIMNATGNPYLDDIGLL-QALTEKMVLVFLLQQGYSDGYTKWDKLKLFFELFPEKICHG 296
Query: 287 FPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKI 346
PNLGNTCYMNAVLQSL +IPSFADDLL Q PW IP AL M L +LL KD + +I
Sbjct: 297 LPNLGNTCYMNAVLQSLLSIPSFADDLLNQSFPWGKIPLNALTMCLARLLFFKDTYNIEI 356
Query: 347 KRELLGNVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENS 406
K LL N+KK ISA AEIF GN QNDAHEFL CLDQLK++MEKLN E G++N
Sbjct: 357 KEMLLLNLKKAISAAAEIFHGNAQNDAHEFLAHCLDQLKDNMEKLNTIWKPKSEFGEDNF 416
Query: 407 SPQMHVGSAATKVFVCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLP 466
Q+ T F CPV+ NFE EL S+ CKACG +LK E NNYLSINL Q K P
Sbjct: 417 PKQVFADDPDTSGFSCPVITNFELELLHSIACKACGQVILKTELNNYLSINLPQRIKAHP 476
Query: 467 LSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNN 526
SIQ++ DLFF EELEY C C+ K+ V H+FSRL R+LI+HLKRYS N L KN+
Sbjct: 477 SSIQSTFDLFFGAEELEYKCAKCEHKTSVGVHSFSRLPRILIVHLKRYSLNEFCALKKND 536
Query: 527 EQVYIPKSLSLSSYCNESTKPPLPLSSSAPVGKCEVLEVSQEMISEINSPLTPSMKLTSE 586
++V I K L +SS+CNE T+PPLPLS + ++L+V ++M S ++ S T E
Sbjct: 537 QEVIISKYLKVSSHCNEGTRPPLPLSEDGEITDFQLLKVIRKMTS---GNISVSWPATKE 593
Query: 587 SSDSLVLPVEPDKNADLQRFQRDCGDASQEQHQRDL-ENGSALESELVHFRDRAIGEKEL 645
S D L + DK ++ ++ Q AS+ Q Q+ L +N E E V+ DRA EKE
Sbjct: 594 SKDILAPHIGSDKESEQKKGQTVFKGASRRQQQKYLGKNSKPNELESVYSGDRAFIEKE- 652
Query: 646 PVADSLMDQGDISLPVMYEDGGKLISSPDTRLVEVHLQEVPQHPELQKYEKTNTFVEFNF 705
P+A + D SL ++ GGK SSP T L +V Q VP++P+ +KY KT+ FV F
Sbjct: 653 PLAHLMTYLEDTSLCQFHKAGGKPASSPGTPLSKVDFQTVPENPKRKKYVKTSKFVA--F 710
Query: 706 DSVTESTNGFYDCKENRIPEGSQGMAEQLQQCIEESIIDEFLQQAPPPGVRKLDAQEHTE 765
D + T Y+ K RIPE Q ++EQ QQC I ++ QQA P K Q HT+
Sbjct: 711 DRIINPTKDLYEDKNIRIPERFQKVSEQTQQCDGMRICEQAPQQALPQSFPKPGTQGHTK 770
Query: 766 ETLNQSTELRLQKADLNHLGALGSD-NPGNKNILDAENTRGEAKELTRNVKMGDPLQAYR 824
L + T+L LQK++ N L ALGS+ NP NK+ILD + +AKE RN GD YR
Sbjct: 771 NLL-RPTKLNLQKSNRNSLLALGSNKNPRNKDILD--KIKSKAKETKRNDDKGD--HTYR 825
Query: 825 LISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFYMH 884
LISVVSH+G + SGHYI D YDF+KQ WFTY+D+ V I E +MQE R +GYIFFYMH
Sbjct: 826 LISVVSHLGKTLKSGHYICDAYDFEKQIWFTYDDMRVLGIQEAQMQEDRRCTGYIFFYMH 885
Query: 885 NGIFEELLRKAENSRLPSTQ 904
N IFEE+L++ EN++L S +
Sbjct: 886 NEIFEEMLKREENAQLNSKE 905
>gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens]
Length = 979
Score = 696 bits (1795), Expect = 0.0
Identities = 438/978 (44%), Positives = 587/978 (60%), Gaps = 78/978 (7%)
Query: 1 MISLKVCGFIQIWSQKTGMTKLKEALIETVQRQKEIKLVVTFKSGKFIRIFQLSNNIRSV 60
M LK+ G I+I S +TG+TK KE E V+++ ++ LVV + +G RIFQLS+NI++V
Sbjct: 1 MSPLKIHGPIRIRSMQTGITKWKEGSFEIVEKENKVSLVVHYNTGGIPRIFQLSHNIKNV 60
Query: 61 VLRHCKKRQSHLRLTLKNNVFLFIDKLSYRDAKQLNMFLDIIHQNKSQQPMK----SDDD 116
VLR +QS L LTL++N FL IDK+ +DA+++ +FLD +HQN+ MK S
Sbjct: 61 VLRPSGAKQSRLMLTLQDNSFLSIDKVPSKDAEEMRLFLDAVHQNRLPAAMKPSQGSGSF 120
Query: 117 WSVFESRNMLKEIDKTSFYSICNKPSYQKMPL---------------------------- 148
++ SR KE + YS N+ S ++ L
Sbjct: 121 GAILGSRTSQKETSRQLSYSD-NQASAKRGSLETKDDIPFRKVLGNPGRGSIKTVAGSGI 179
Query: 149 -----FMSKSPTHVKKGILENQGGKGQNTLSSDVQTNEDILKEDNPVPNKKYKTD-SLKY 202
++ + T ++ G+LEN+ K + +S+ + NED KE++ N K TD S KY
Sbjct: 180 ARTIPSLTSTSTPLRSGLLENRTEKRKRMISTGSELNEDYPKENDSSSNNKAMTDPSRKY 239
Query: 203 IQSNRKNPSSLEDLEKDRDLKLGP----SF-------NTNCNGNPNLDETVLATQTLNAK 251
+ S+R+ SL+ E++R L P SF + +G NLD T +++QT +AK
Sbjct: 240 LTSSREKQLSLKQSEENRTSGLLPLQSSSFYGSRAGSKEHSSGGTNLDRTNVSSQTPSAK 299
Query: 252 NGLTSPLEPEH-SQGDPRCN-------KAQVPLDSHSQQLQQGFPNLGNTCYMNAVLQSL 303
L +P S RCN K +VPL SH QQ QGF NLGNTCYMNA+LQSL
Sbjct: 300 RSLGFLPQPVPLSVKKLRCNQDYTGWNKPRVPLSSHQQQQLQGFSNLGNTCYMNAILQSL 359
Query: 304 FAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISAVAE 363
F++ SFA+DLL QG+PW+ IP ALI LL KD C+++ K++LL VK ISA AE
Sbjct: 360 FSLQSFANDLLKQGIPWKKIPLNALIRRFAHLLVKKDICNSETKKDLLKKVKNAISATAE 419
Query: 364 IFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCP 423
FSG MQNDAHEFL QCLDQLKEDMEKLN T T G+EN SP + +AT+ + CP
Sbjct: 420 RFSGYMQNDAHEFLSQCLDQLKEDMEKLNKTWKTEPVSGEEN-SPDI----SATRAYTCP 474
Query: 424 VVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPL-PLSIQNSLDLFFKEEEL 482
V+ N EFE+Q S+ICKACG + K E N LSI+L + KPL P SIQ+SLDLFF+ EEL
Sbjct: 475 VITNLEFEVQHSIICKACGEIIPKREQFNDLSIDLPRRKKPLPPRSIQDSLDLFFRAEEL 534
Query: 483 EYNCQMCKQKSCVARHTFSRLSRVLIIHLKRYSFNNAWLL-VKNNEQVYIPKSLSLSSYC 541
EY+C+ C K + RH F+RL RVLI+HLKRYSFN A L K +QV IP+ L+LSS+C
Sbjct: 535 EYSCEKCGGKCALVRHKFNRLPRVLILHLKRYSFNVALSLNNKIGQQVIIPRYLTLSSHC 594
Query: 542 NESTKPPLPLSSSAPVGKCEVLEVSQEMISEINSPLTPSMKLTSESSDSLVLPVEPDKNA 601
E+TKPP L SA + L+ SQ + S I SP TPS K T +S SL L ++ D
Sbjct: 595 TENTKPPFTLGWSAHMAISRPLKASQMVNSCITSPSTPSKKFTFKSKSSLALCLDSDSED 654
Query: 602 DLQR----FQRDCGDASQEQHQRDLENGSAL------ESELVHFRDRAIGEKELPVADSL 651
+L+R QR C EQ Q DLE S L +SEL + + E+EL A
Sbjct: 655 ELKRSVALSQRLCEMLGNEQQQEDLEKDSKLCPIEPDKSELENSGFDRMSEEELLAAVLE 714
Query: 652 MDQGDISLPVMYEDGGKLISSPDTRLVEVHLQEVPQHPELQKYEKTNTFVEFNFDSVTES 711
+ + D S + +ED K SSPDT E +QE+P++P+ + EK T E + S TE
Sbjct: 715 ISKRDASPSLSHEDDDKPTSSPDTGFAEDDIQEMPENPDTMETEKPKTITELDPASFTEI 774
Query: 712 TNGFYDCKENRIPEGSQGMAEQLQQC-IEESIIDEFLQQAPPPGVRKLDAQEHTE-ETLN 769
T + KEN+ PEGSQG + LQQ +E ++ LQQA +++ +A E E + L
Sbjct: 775 TKDCDENKENKTPEGSQGEVDWLQQYDMEREREEQELQQALAQSLQEQEAWEQKEDDDLK 834
Query: 770 QSTELRLQKADLNHLGALGSD-NPGNKNILDAENTRGEAKELTRNVKMGDPLQAYRLISV 828
++TEL LQ+ + + + ALGSD + GN+++ D E T EA+EL RN + G+ +YRLISV
Sbjct: 835 RATELSLQEFNNSFVDALGSDEDSGNEDVFDMEYTEAEAEELKRNAETGNLPHSYRLISV 894
Query: 829 VSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFYMHNGIF 888
VSHIGS+ +SGHYISDVYD +KQAWFTYNDL VS+I E +Q R SGYIFFYMH IF
Sbjct: 895 VSHIGSTSSSGHYISDVYDIKKQAWFTYNDLEVSKIQEAAVQSDRDRSGYIFFYMHKEIF 954
Query: 889 EELLRKAENSRLPSTQAG 906
+ELL +NS+ ST+ G
Sbjct: 955 DELLETEKNSQSLSTEVG 972
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 80.9 bits (198), Expect = 5e-15
Identities = 92/356 (25%), Positives = 151/356 (42%), Gaps = 52/356 (14%)
Query: 217 EKDRDLKLGPSFNTNCNGNPNLDETV--------LATQTLNAKNGLTSPLEPEHSQGDPR 268
E+DR+ PS +P++ + + T T+N +N T + E S+
Sbjct: 705 ERDRE----PSKLKRSYSSPDITQAIQEEEKRKPTVTPTVNRENKPTCYPKAEISRLSAS 760
Query: 269 CNKAQVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFAD--------------DLL 314
+ P+ S G NLGNTCYMN++LQ L P AD +LL
Sbjct: 761 QIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLL 820
Query: 315 TQG--VPWEY-IPFEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISAVAEIFSGNMQN 371
V E+ I +AL + ++ KDF K I + + F+G Q
Sbjct: 821 GHKGEVAEEFGIIMKALWTGQYRYISPKDF-------------KITIGKINDQFAGYSQQ 867
Query: 372 DAHEFLGQCLDQLKEDMEKLNATLNTGKECGD--ENSSPQMHVGSAATKVFVCPVVANFE 429
D+ E L +D L ED+ K + +E D ++ H ++ +VA F+
Sbjct: 868 DSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQ 927
Query: 430 FELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELEYN---- 485
+ + ++ C C E YLS+ L +K ++Q+ L LF KEE+L N
Sbjct: 928 GQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSK---CTLQDCLRLFSKEEKLTDNNRFY 984
Query: 486 CQMCK-QKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSY 540
C C+ ++ + + +L VL++HLKR+S++ W + ++L LS Y
Sbjct: 985 CSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQY 1040
Score = 40.0 bits (92), Expect = 0.010
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 820 LQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYI 879
L+ Y L SV +H G + GHY + + +Q WF ++D VS+IS + ++ + + YI
Sbjct: 1048 LKKYNLFSVSNHYGGL-DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSS---AAYI 1103
Query: 880 FFYMHNG 886
FY G
Sbjct: 1104 LFYTSLG 1110
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 80.9 bits (198), Expect = 5e-15
Identities = 92/356 (25%), Positives = 151/356 (42%), Gaps = 52/356 (14%)
Query: 217 EKDRDLKLGPSFNTNCNGNPNLDETV--------LATQTLNAKNGLTSPLEPEHSQGDPR 268
E+DR+ PS +P++ + + T T+N +N T + E S+
Sbjct: 705 ERDRE----PSKLKRSYSSPDITQAIQEEEKRKPTVTPTVNRENKPTCYPKAEISRLSAS 760
Query: 269 CNKAQVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFAD--------------DLL 314
+ P+ S G NLGNTCYMN++LQ L P AD +LL
Sbjct: 761 QIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLL 820
Query: 315 TQG--VPWEY-IPFEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISAVAEIFSGNMQN 371
V E+ I +AL + ++ KDF K I + + F+G Q
Sbjct: 821 GHKGEVAEEFGIIMKALWTGQYRYISPKDF-------------KITIGKINDQFAGYSQQ 867
Query: 372 DAHEFLGQCLDQLKEDMEKLNATLNTGKECGD--ENSSPQMHVGSAATKVFVCPVVANFE 429
D+ E L +D L ED+ K + +E D ++ H ++ +VA F+
Sbjct: 868 DSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQ 927
Query: 430 FELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELEYN---- 485
+ + ++ C C E YLS+ L +K ++Q+ L LF KEE+L N
Sbjct: 928 GQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSK---CTLQDCLRLFSKEEKLTDNNRFY 984
Query: 486 CQMCK-QKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSY 540
C C+ ++ + + +L VL++HLKR+S++ W + ++L LS Y
Sbjct: 985 CSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQY 1040
Score = 40.0 bits (92), Expect = 0.010
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 820 LQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYI 879
L+ Y L SV +H G + GHY + + +Q WF ++D VS+IS + ++ + + YI
Sbjct: 1048 LKKYNLFSVSNHYGGL-DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSS---AAYI 1103
Query: 880 FFYMHNG 886
FY G
Sbjct: 1104 LFYTSLG 1110
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 80.9 bits (198), Expect = 5e-15
Identities = 92/356 (25%), Positives = 151/356 (42%), Gaps = 52/356 (14%)
Query: 217 EKDRDLKLGPSFNTNCNGNPNLDETV--------LATQTLNAKNGLTSPLEPEHSQGDPR 268
E+DR+ PS +P++ + + T T+N +N T + E S+
Sbjct: 705 ERDRE----PSKLKRSYSSPDITQAIQEEEKRKPTVTPTVNRENKPTCYPKAEISRLSAS 760
Query: 269 CNKAQVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFAD--------------DLL 314
+ P+ S G NLGNTCYMN++LQ L P AD +LL
Sbjct: 761 QIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLL 820
Query: 315 TQG--VPWEY-IPFEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISAVAEIFSGNMQN 371
V E+ I +AL + ++ KDF K I + + F+G Q
Sbjct: 821 GHKGEVAEEFGIIMKALWTGQYRYISPKDF-------------KITIGKINDQFAGYSQQ 867
Query: 372 DAHEFLGQCLDQLKEDMEKLNATLNTGKECGD--ENSSPQMHVGSAATKVFVCPVVANFE 429
D+ E L +D L ED+ K + +E D ++ H ++ +VA F+
Sbjct: 868 DSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQ 927
Query: 430 FELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELEYN---- 485
+ + ++ C C E YLS+ L +K ++Q+ L LF KEE+L N
Sbjct: 928 GQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSK---CTLQDCLRLFSKEEKLTDNNRFY 984
Query: 486 CQMCK-QKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSY 540
C C+ ++ + + +L VL++HLKR+S++ W + ++L LS Y
Sbjct: 985 CSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQY 1040
Score = 40.0 bits (92), Expect = 0.010
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 820 LQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYI 879
L+ Y L SV +H G + GHY + + +Q WF ++D VS+IS + ++ + + YI
Sbjct: 1048 LKKYNLFSVSNHYGGL-DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSS---AAYI 1103
Query: 880 FFYMHNG 886
FY G
Sbjct: 1104 LFYTSLG 1110
>gi|149192845 ubiquitin specific protease 24 [Homo sapiens]
Length = 2460
Score = 77.8 bits (190), Expect = 4e-14
Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 44/288 (15%)
Query: 262 HSQGDPRCNKA---QVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGV 318
H Q DP K P+DS S G N G TCYMNAV Q L+ P + LL+
Sbjct: 1503 HHQPDPALTKEFDYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDD 1562
Query: 319 PWEYIPFEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISAVAEIFSGNMQNDAHEFLG 378
+ P +++ + L +K++ + N K+ + Q DA+EF
Sbjct: 1563 DTDN-PDDSVFYQVQSLFG--HLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFT 1619
Query: 379 QCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLIC 438
+DQ+ E ++K+ G++ +N+ F+ IC
Sbjct: 1620 SLIDQMDEYLKKM------GRDQIFKNT---------------------FQGIYSDQKIC 1652
Query: 439 KACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNCQMCKQKSC 494
K C H + E ++++NL + S++ SLD F + E LE Y C+ CK+K
Sbjct: 1653 KDCPHRYEREEA--FMALNLGVTSCQ---SLEISLDQFVRGEVLEGSNAYYCEKCKEKRI 1707
Query: 495 VARHT-FSRLSRVLIIHLKRYSFN-NAWLLVKNNEQVYIPKSLSLSSY 540
+ T L VL+IHL R+ F+ + +K +EQ+ P L++ Y
Sbjct: 1708 TVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPY 1755
>gi|32698815 ubiquitin thiolesterase 12 [Homo sapiens]
Length = 370
Score = 72.0 bits (175), Expect = 2e-12
Identities = 87/306 (28%), Positives = 131/306 (42%), Gaps = 45/306 (14%)
Query: 273 QVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLT-QGVPWEYIPFEALIMT 331
Q P++ H G N GNTCY N+VLQ+L+ F + +L + P + E+L+
Sbjct: 31 QFPVNEH----YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKK---ESLLTC 83
Query: 332 LTQLLALKDFCSTKIKRELLGNV--KKVISAVA---EIFSGNMQNDAHEFLGQCL----D 382
L L F S +++ +G + KK I+ + E+F MQ DAHEFL L D
Sbjct: 84 LADL-----FHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIAD 138
Query: 383 QLKED--MEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLICKA 440
L+E+ EK N L G + N+ S +V + F+ L C
Sbjct: 139 ILQEERKQEKQNGRLPNGNIDNENNN-------STPDPTWVDEI---FQGTLTNETRCLT 188
Query: 441 CGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEE----ELEYNCQMCKQK-SCV 495
C K E LS+++ Q T SI + L F E E +Y C+ C+ K
Sbjct: 189 CETISSKDEDFLDLSVDVEQNT-----SITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
Query: 496 ARHTFSRLSRVLIIHLKRYSF-NNAWLLVKNNEQVYIPKSLSLSSYCNESTKPPLPLSSS 554
R +L +L +HLKR+ + + K + +V P L L + ++T P
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 555 APVGKC 560
A V C
Sbjct: 304 AVVVHC 309
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 24/92 (26%)
Query: 802 NTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGHYISDV--YDFQKQAWFTYNDL 859
NT G+A +P + Y L++VV H GS PN GHYI+ V +DF W ++D
Sbjct: 288 NTSGDAT---------NPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF----WLLFDDD 334
Query: 860 CVSEISETKMQE---------ARLHSGYIFFY 882
V +I ++E SGYI FY
Sbjct: 335 IVEKIDAQAIEEFYGLTSDISKNSESGYILFY 366
>gi|62243586 ubiquitin-specific protease 21 [Homo sapiens]
Length = 565
Score = 67.8 bits (164), Expect = 4e-11
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 51/302 (16%)
Query: 286 GFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLA-------L 338
G NLGNTC++NAVLQ L + D L + E +P LT+ A
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQE-VPGGGRAQELTEAFADVIGALWH 271
Query: 339 KDFCSTKIKRELLGNVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATL--- 395
D C +K + + FSG Q DA EFL +++L ++ +
Sbjct: 272 PDSCEAVNPTRFRAVFQKYVPS----FSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPI 327
Query: 396 -------NTGKECGDENSSPQMHVGSAATKVFV-------CPVVANFEFELQLSLICKAC 441
+ + G P++ A ++ +V F +L+ L C+AC
Sbjct: 328 LANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 442 GHAVLKVEPNNYLSINLHQETKPLP--------LSIQNSLDLFFKEEELEYN----CQMC 489
G+ E LS+ P+P +S+++ +LF KEEELE C C
Sbjct: 388 GYRSTTFEVFCDLSL-------PIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRC 440
Query: 490 KQKS-CVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIP-KSLSLSSYCNESTKP 547
+QK+ + T R R+L++HL R+S + + K++ V P + LSL + ++
Sbjct: 441 RQKTRSTKKLTVQRFPRILVLHLNRFSASRG-SIKKSSVGVDFPLQRLSLGDFASDKAGS 499
Query: 548 PL 549
P+
Sbjct: 500 PV 501
Score = 34.3 bits (77), Expect = 0.55
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 815 KMGDPLQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARL 874
K G P+ Y+L ++ +H GS + GHY + + W YND VS +SE ++ +
Sbjct: 496 KAGSPV--YQLYALCNHSGSV-HYGHYTALCRC--QTGWHVYNDSRVSPVSENQVASS-- 548
Query: 875 HSGYIFFY 882
GY+ FY
Sbjct: 549 -EGYVLFY 555
>gi|74027267 ubiquitin-specific protease 21 [Homo sapiens]
Length = 565
Score = 67.8 bits (164), Expect = 4e-11
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 51/302 (16%)
Query: 286 GFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLA-------L 338
G NLGNTC++NAVLQ L + D L + E +P LT+ A
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQE-VPGGGRAQELTEAFADVIGALWH 271
Query: 339 KDFCSTKIKRELLGNVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATL--- 395
D C +K + + FSG Q DA EFL +++L ++ +
Sbjct: 272 PDSCEAVNPTRFRAVFQKYVPS----FSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPI 327
Query: 396 -------NTGKECGDENSSPQMHVGSAATKVFV-------CPVVANFEFELQLSLICKAC 441
+ + G P++ A ++ +V F +L+ L C+AC
Sbjct: 328 LANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 442 GHAVLKVEPNNYLSINLHQETKPLP--------LSIQNSLDLFFKEEELEYN----CQMC 489
G+ E LS+ P+P +S+++ +LF KEEELE C C
Sbjct: 388 GYRSTTFEVFCDLSL-------PIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRC 440
Query: 490 KQKS-CVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIP-KSLSLSSYCNESTKP 547
+QK+ + T R R+L++HL R+S + + K++ V P + LSL + ++
Sbjct: 441 RQKTRSTKKLTVQRFPRILVLHLNRFSASRG-SIKKSSVGVDFPLQRLSLGDFASDKAGS 499
Query: 548 PL 549
P+
Sbjct: 500 PV 501
Score = 34.3 bits (77), Expect = 0.55
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 815 KMGDPLQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARL 874
K G P+ Y+L ++ +H GS + GHY + + W YND VS +SE ++ +
Sbjct: 496 KAGSPV--YQLYALCNHSGSV-HYGHYTALCRC--QTGWHVYNDSRVSPVSENQVASS-- 548
Query: 875 HSGYIFFY 882
GY+ FY
Sbjct: 549 -EGYVLFY 555
>gi|45267835 ubiquitin specific protease 50 [Homo sapiens]
Length = 339
Score = 67.4 bits (163), Expect = 6e-11
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 34/281 (12%)
Query: 286 GFPNLGNTCYMNAVLQSLFAIPSFADDLLT----QGVPWEYIPFE--------ALIMTLT 333
G NLGNTC +NA+ Q L +I + LT + +P + A +MT
Sbjct: 45 GLWNLGNTCCVNAISQCLCSILPLVEYFLTGKYITALQKFLLPSDCSEVATAFAYLMT-D 103
Query: 334 QLLALKDFCSTKIKRELLGNVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNA 393
L D S +I LGN+ F+ MQ DA EFL L++L E ++K +
Sbjct: 104 MWLGDSDCVSPEIFWSALGNLYPA-------FTKKMQQDAQEFLICVLNELHEALKKYHY 156
Query: 394 TLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLICKACGHAVLKVEPNNY 453
+ E G + + + T + + FE +L S++C C K E
Sbjct: 157 SRRRSYEKGSTQRCCRKWI-TTETSI----ITQLFEEQLNYSIVCLKCEKCTYKNEVFTV 211
Query: 454 LSINLHQETKPLPLSIQNSLDLFFKEEELEYN----CQMCKQKSCVA-RHTFSRLSRVLI 508
S+ + + + S+++ L FF+++ L +N C C+ K A R + S+ +++I
Sbjct: 212 FSLPIPSKYE---CSLRDCLQCFFQQDALTWNNEIHCSFCETKQETAVRASISKAPKIII 268
Query: 509 IHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSY-CNESTKPP 548
HLKR+ + Y +L L+ Y C+ K P
Sbjct: 269 FHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYICSIFRKYP 309
>gi|28565285 ubiquitin specific peptidase 2 isoform b [Homo sapiens]
Length = 396
Score = 67.0 bits (162), Expect = 8e-11
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 18/258 (6%)
Query: 270 NKAQVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWE-YIPFEAL 328
NKA+ +S S Q G NLGNTC+MN++LQ L D L + + + A
Sbjct: 46 NKAK---NSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAH 102
Query: 329 IMTLTQLLALKDFCSTKIKRELLG--NVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKE 386
+ + L T +++ K I A F G Q DA EFL LD L
Sbjct: 103 TALVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 162
Query: 387 DMEKLNATLNTGKECGDENSSPQMHVGSAATKVFV----CPVVANFEFELQLSLICKACG 442
++ ++ + E D P G + ++ + F +L+ SL C CG
Sbjct: 163 EVNRVTLRPKSNPENLDH--LPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG 220
Query: 443 HAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELEYN----CQMCK-QKSCVAR 497
+ +P LS+ + + P +++ + + LF KE+ L+ + C C+ +K C+ +
Sbjct: 221 YCSTVFDPFWDLSLPIAKRGYP-EVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKK 279
Query: 498 HTFSRLSRVLIIHLKRYS 515
+ R ++L++HLKR+S
Sbjct: 280 FSIQRFPKILVLHLKRFS 297
>gi|188528692 ubiquitin specific peptidase 2 isoform a [Homo
sapiens]
Length = 605
Score = 67.0 bits (162), Expect = 8e-11
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 276 LDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWE-YIPFEALIMTLTQ 334
++S S Q G NLGNTC+MN++LQ L D L + + + A + +
Sbjct: 258 MNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEE 317
Query: 335 LLALKDFCSTKIKRELLG--NVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLN 392
L T +++ K I A F G Q DA EFL LD L ++ ++
Sbjct: 318 FAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVT 377
Query: 393 ATLNTGKECGDENSSPQMHVGSAATKVFV----CPVVANFEFELQLSLICKACGHAVLKV 448
+ E D P G + ++ + F +L+ SL C CG+
Sbjct: 378 LRPKSNPENLDH--LPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVF 435
Query: 449 EPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELEYN----CQMCK-QKSCVARHTFSRL 503
+P LS+ + + P +++ + + LF KE+ L+ + C C+ +K C+ + + R
Sbjct: 436 DPFWDLSLPIAKRGYP-EVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRF 494
Query: 504 SRVLIIHLKRYS 515
++L++HLKR+S
Sbjct: 495 PKILVLHLKRFS 506
>gi|197116355 ubiquitin specific peptidase 46 isoform 2 [Homo
sapiens]
Length = 359
Score = 66.2 bits (160), Expect = 1e-10
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 44/261 (16%)
Query: 273 QVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTL 332
Q P++ H G N GNTCY N+VLQ+L+ F +++L + E L+ L
Sbjct: 20 QFPINEH----YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKA--QQKKKENLLTCL 73
Query: 333 TQLLALKDFCSTKIKRELLGNV--KKVISAVA---EIFSGNMQNDAHEFLGQCLD----- 382
L F S +++ +G + KK IS + ++F MQ DAHEFL L+
Sbjct: 74 ADL-----FHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADI 128
Query: 383 -QLKEDMEKLNATLNTGK-ECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLICKA 440
Q ++ EK N L G EN+ P++ +V + F+ L C
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAENNKPEL--------TWVHEI---FQGTLTNETRCLN 177
Query: 441 CGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEE----ELEYNCQ-MCKQKSCV 495
C K E LS+++ Q T SI + L F E E +Y C+ C ++
Sbjct: 178 CETVSSKDEDFLDLSVDVEQNT-----SITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 232
Query: 496 ARHTFSRLSRVLIIHLKRYSF 516
R +L +L +HLKR+ +
Sbjct: 233 KRMRVKKLPMILALHLKRFKY 253
Score = 41.6 bits (96), Expect = 0.003
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 20/90 (22%)
Query: 802 NTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCV 861
NT +A L R Y L++VV H GS PN GHYI+ V W ++D V
Sbjct: 277 NTSSDAVNLDR---------MYDLVAVVVHCGSGPNRGHYITIVK--SHGFWLLFDDDIV 325
Query: 862 SEISETKMQE---------ARLHSGYIFFY 882
+I ++E SGYI FY
Sbjct: 326 EKIDAQAIEEFYGLTSDISKNSESGYILFY 355
>gi|31377709 ubiquitin specific peptidase 46 isoform 1 [Homo
sapiens]
Length = 366
Score = 66.2 bits (160), Expect = 1e-10
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 44/261 (16%)
Query: 273 QVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTL 332
Q P++ H G N GNTCY N+VLQ+L+ F +++L + E L+ L
Sbjct: 27 QFPINEH----YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKA--QQKKKENLLTCL 80
Query: 333 TQLLALKDFCSTKIKRELLGNV--KKVISAVA---EIFSGNMQNDAHEFLGQCLD----- 382
L F S +++ +G + KK IS + ++F MQ DAHEFL L+
Sbjct: 81 ADL-----FHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADI 135
Query: 383 -QLKEDMEKLNATLNTGK-ECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLICKA 440
Q ++ EK N L G EN+ P++ +V + F+ L C
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAENNKPEL--------TWVHEI---FQGTLTNETRCLN 184
Query: 441 CGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEE----ELEYNCQ-MCKQKSCV 495
C K E LS+++ Q T SI + L F E E +Y C+ C ++
Sbjct: 185 CETVSSKDEDFLDLSVDVEQNT-----SITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
Query: 496 ARHTFSRLSRVLIIHLKRYSF 516
R +L +L +HLKR+ +
Sbjct: 240 KRMRVKKLPMILALHLKRFKY 260
Score = 41.6 bits (96), Expect = 0.003
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 20/90 (22%)
Query: 802 NTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCV 861
NT +A L R Y L++VV H GS PN GHYI+ V W ++D V
Sbjct: 284 NTSSDAVNLDR---------MYDLVAVVVHCGSGPNRGHYITIVK--SHGFWLLFDDDIV 332
Query: 862 SEISETKMQE---------ARLHSGYIFFY 882
+I ++E SGYI FY
Sbjct: 333 EKIDAQAIEEFYGLTSDISKNSESGYILFY 362
>gi|55770886 ubiquitin thiolesterase 3 [Homo sapiens]
Length = 520
Score = 63.5 bits (153), Expect = 8e-10
Identities = 80/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 286 GFPNLGNTCYMNAVLQSLFAIPSFADDL-------LTQGVPWEYIPFEALIMTLTQLLAL 338
G NLGNTC+MNA+LQSL I F L G + + +
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 339 KDF----CSTKIKRELLGNVKKVISAVAEI---FSGNMQNDAHEFLGQCLDQLKEDME-- 389
++F C+ + + + + V +I F G Q DAHEF+ LD L +++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGG 279
Query: 390 ----------KLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLICK 439
+ N+TL+ +C + A+T V A F LQ + C
Sbjct: 280 FNGVSRSAILQENSTLSASNKC---------CINGAST-----VVTAIFGGILQNEVNCL 325
Query: 440 ACGHAVLKVEPNNYLSINL----------HQETKPLPLSIQNSLDLFFKEEELE----YN 485
CG K +P LS+++ +QE P+ S+++ L F EEL+ Y
Sbjct: 326 ICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPV-CSLRDCLRSFTDLEELDETELYM 384
Query: 486 CQMCKQK-SCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIP-KSLSLSSYCNE 543
C CK+K + +L +VL +HLKR+ + A+L K + V P + L + Y E
Sbjct: 385 CHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHW-TAYLRNKVDTYVEFPLRGLDMKCYLLE 443
Score = 39.3 bits (90), Expect = 0.017
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +VV H GS SGHY + Y + WF +ND V+ E + +A+ YI FY
Sbjct: 454 YDLAAVVVHHGSGVGSGHYTA--YATHEGRWFHFNDSTVTLTDEETVVKAK---AYILFY 508
Query: 883 MHN 885
+ +
Sbjct: 509 VEH 511
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 63.2 bits (152), Expect = 1e-09
Identities = 87/352 (24%), Positives = 143/352 (40%), Gaps = 37/352 (10%)
Query: 286 GFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQL-----LALKD 340
G NLGNTC+MN+V+QSL D + E I + + T +L + L+
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAE-INYNNPLGTGGRLAIGFAVLLRA 556
Query: 341 FCSTKIKRELLGNVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGKE 400
+K ++++ A F+G Q+DA EF+ LD L ED+ ++ T E
Sbjct: 557 LWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYT--E 614
Query: 401 CGDENSSPQMHVGSAATKVFVCP----VVANFEFELQLSLICKACGHAVLKVEPNNYLSI 456
D + P V A + +V F+ + + L+C C + +P YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 457 NLHQETKPLPLSIQNSLDLFFKEE----ELEYNCQMCKQKSCVARHTFSRLSRVLIIHLK 512
L Q+ K LP+ +F E +++ + K+ S A LS+ +H+K
Sbjct: 675 PLPQKQKVLPV-------FYFAREPHSKPIKFLVSVSKENS-TASEVLDSLSQ--SVHVK 724
Query: 513 RYSFNNAWLLVKNNEQVYIPKSLSLSSYCNESTKPPLP-LSSSAPVGKCEVLEVSQEMIS 571
+ A ++ +V++P S SL + T LSS + VLEV Q
Sbjct: 725 PENLRLAEVIKNRFHRVFLP-SHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQR--- 780
Query: 572 EINSPLTPSMKLTSESSDSLVLPVEPDKNADLQRFQR--DCGDASQEQHQRD 621
P PS+ ++ ++ E +K R R C Q+ H D
Sbjct: 781 ----PQVPSVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPD 828
Score = 39.7 bits (91), Expect = 0.013
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 468 SIQNSLDLFFKEEELE----YNCQMCKQKSCVARHTFS-RLSRVLIIHLKRYSFNNAWLL 522
++ L+LF + E L + C CKQ ++ RL VLI+ LKR+SF +
Sbjct: 1059 TLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWR 1118
Query: 523 VKNNEQVYIP-KSLSLSSYCNESTKPPLP 550
K N+ V P ++L LS +C + LP
Sbjct: 1119 DKINDLVEFPVRNLDLSKFCIGQKEEQLP 1147
>gi|239742282 PREDICTED: hypothetical protein XP_002342474 [Homo
sapiens]
Length = 530
Score = 60.8 bits (146), Expect = 5e-09
Identities = 81/304 (26%), Positives = 125/304 (41%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L PE Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLVPEARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHPSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y ++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQQN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.0 bits (79), Expect = 0.32
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTAASITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens]
Length = 1123
Score = 60.1 bits (144), Expect = 9e-09
Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 286 GFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTK 345
G NLGNTC++NA +Q L P A+ LL++ ++ + Q ++ F ++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS- 181
Query: 346 IKRELLGNVKKVISAVAEI------FSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGK 399
GN K +S + ++ F Q DAHEFL +D ++ K
Sbjct: 182 ------GNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQ-------------K 222
Query: 400 ECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLH 459
C N ++ + AT + V F L+ + C C +P +++ +
Sbjct: 223 AC--LNGCAKLDRQTQATTL----VHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR 276
Query: 460 QETKPLPLSIQNSLDLFFKEEELE----YNCQMCKQK-SCVARHTFSRLSRVLIIHLKRY 514
Q +I +L+LF K + L Y C CK+K R T R S VL + LKR+
Sbjct: 277 QAA-----NIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRF 331
Query: 515 SFNNAWLLVKNNEQVYIPKSLSLSSYCNESTKPPL 549
+ + + K+ V P+ L++ Y +++ P+
Sbjct: 332 ANFSGGKITKD---VGYPEFLNIRPYMSQNNGDPV 363
Score = 33.5 bits (75), Expect = 0.94
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 817 GDPLQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHS 876
GDP+ Y L +V+ H G S ++GHY V Q W+ ND S + + ++
Sbjct: 360 GDPVM-YGLYAVLVHSGYSCHAGHYYCYVKASNGQ-WYQMND---SLVHSSNVKVVLNQQ 414
Query: 877 GYIFFYMH----NGIFEELLRKAENSRLPSTQAGVIP 909
Y+ FY+ E L+ + +S LP + VIP
Sbjct: 415 AYVLFYLRIPGSKKSPEGLISRTGSSSLPG-RPSVIP 450
>gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 60.1 bits (144), Expect = 9e-09
Identities = 70/275 (25%), Positives = 109/275 (39%), Gaps = 45/275 (16%)
Query: 286 GFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTK 345
G NLGNTC+ NA LQ L P A+ +L+ + E M T + S
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHS-KTCHAEGFCMMCTMQAHITQALSNP 170
Query: 346 IKRELLGNVKKVISAVAEI------FSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGK 399
G+V K + + E+ F Q DAHEFL +D ++ K
Sbjct: 171 ------GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQ-------------K 211
Query: 400 ECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLH 459
C + ++ H + VC + + L+ + C C +P YL I L
Sbjct: 212 ACLNGSNKLDRHTQAT---TLVCQIFGGY---LRSRVKCLNCKGVSDTFDP--YLDITLE 263
Query: 460 QETKPLPLSIQNSLDLFFKEEELE----YNCQMCKQK-SCVARHTFSRLSRVLIIHLKRY 514
+ S+ +L+ F K E+L+ Y C CK+ R T R S VL + LKR+
Sbjct: 264 IKAAQ---SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF 320
Query: 515 SFNNAWLLVKNNEQVYIPKSLSLSSYCNESTKPPL 549
+ + K+ V P+ L + Y ++ P+
Sbjct: 321 ANFTGGKIAKD---VKYPEYLDIRPYMSQPNGEPI 352
Score = 31.2 bits (69), Expect = 4.6
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 817 GDPLQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHS 876
G+P+ Y L +V+ H G + ++GHY + W+ ND S +S + ++
Sbjct: 349 GEPI-VYVLYAVLVHTGFNCHAGHYFCYI-KASNGLWYQMND---SIVSTSDIRSVLSQQ 403
Query: 877 GYIFFYMHN 885
Y+ FY+ +
Sbjct: 404 AYVLFYIRS 412
>gi|169217654 PREDICTED: similar to deubiquitinating enzyme DUB1
[Homo sapiens]
Length = 530
Score = 59.3 bits (142), Expect = 2e-08
Identities = 80/304 (26%), Positives = 124/304 (40%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQADHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y ++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQQN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.4 bits (80), Expect = 0.25
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTASSITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|239742291 PREDICTED: hypothetical protein XP_002342477 [Homo
sapiens]
Length = 530
Score = 59.3 bits (142), Expect = 2e-08
Identities = 80/304 (26%), Positives = 125/304 (41%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y +++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQTN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.4 bits (80), Expect = 0.25
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTASSITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|239742289 PREDICTED: hypothetical protein XP_002342476 [Homo
sapiens]
Length = 530
Score = 59.3 bits (142), Expect = 2e-08
Identities = 80/304 (26%), Positives = 125/304 (41%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y +++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQTN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.4 bits (80), Expect = 0.25
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTASSITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|239742278 PREDICTED: hypothetical protein XP_002342472 [Homo
sapiens]
Length = 530
Score = 59.3 bits (142), Expect = 2e-08
Identities = 80/304 (26%), Positives = 125/304 (41%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y +++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQTN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.4 bits (80), Expect = 0.25
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTASSITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|24234683 ubiquitin specific peptidase 11 [Homo sapiens]
Length = 963
Score = 59.3 bits (142), Expect = 2e-08
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 286 GFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTK 345
G NLGNTC+MN+ LQ L +P + L Y+ L + + +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNC----YLEELNFRNPLGMKGEIAEAYADL 365
Query: 346 IKRELLGNVKKVISAV--------AEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNT 397
+K+ G+ + ++ V A F G Q+D+ E L LD L ED+ ++
Sbjct: 366 VKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK--KE 423
Query: 398 GKECGDENSSPQMHVGSAATKVFV----CPVVANFEFELQLSLICKACGHAVLKVEPNNY 453
E D P V A + +V F + +L+C CG+ + +P Y
Sbjct: 424 YVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCY 483
Query: 454 LSINLHQETKPLPLSIQNSLDLFF 477
LS+ PLP+S + L++FF
Sbjct: 484 LSV-------PLPISHKRVLEVFF 500
Score = 35.8 bits (81), Expect = 0.19
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 463 KPLPLSIQNSLDLFFKEEELE----YNCQMCKQKSCVARHT-FSRLSRVLIIHLKRYSF 516
K P+ +Q ++LF E LE + C CKQ + L +LIIHLKR+S+
Sbjct: 775 KKAPVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 833
>gi|239758075 PREDICTED: similar to deubiquitinating enzyme DUB1
[Homo sapiens]
Length = 530
Score = 58.9 bits (141), Expect = 2e-08
Identities = 80/304 (26%), Positives = 124/304 (40%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y ++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQQN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.4 bits (80), Expect = 0.25
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTASSITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|239742297 PREDICTED: hypothetical protein XP_002342480 [Homo
sapiens]
Length = 530
Score = 58.9 bits (141), Expect = 2e-08
Identities = 80/304 (26%), Positives = 124/304 (40%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y ++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQQN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.4 bits (80), Expect = 0.25
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTASSITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|239742287 PREDICTED: hypothetical protein XP_002342475 [Homo
sapiens]
Length = 530
Score = 58.9 bits (141), Expect = 2e-08
Identities = 80/304 (26%), Positives = 124/304 (40%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y ++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQQN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.0 bits (79), Expect = 0.32
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTAASITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|113415490 PREDICTED: similar to deubiquitinating enzyme 1 [Homo
sapiens]
Length = 530
Score = 58.5 bits (140), Expect = 3e-08
Identities = 80/304 (26%), Positives = 124/304 (40%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y ++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQPN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.4 bits (80), Expect = 0.25
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTASSITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
>gi|113415488 PREDICTED: similar to deubiquitinating enzyme 1 [Homo
sapiens]
Length = 530
Score = 58.5 bits (140), Expect = 3e-08
Identities = 80/304 (26%), Positives = 124/304 (40%), Gaps = 47/304 (15%)
Query: 254 LTSPLEPEHSQGDPRCNKAQVPLDSHSQQ-LQQGFPNLGNTCYMNAVLQSLFAIPSFADD 312
L L P Q PR ++PL S + G N+GNTCY+NA LQ L P A+
Sbjct: 51 LCDDLAPVARQLAPR---EKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANY 107
Query: 313 LLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL--LGNVKKVISAVAEIFSGNMQ 370
+L++ + ++ Q I R L G+V + A+A F Q
Sbjct: 108 MLSREHSQTCHRHKGCMLCTMQ---------AHITRALHNPGHVIQPSQALAAGFHRGKQ 158
Query: 371 NDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEF 430
DAHEFL +D +K+ A L K+ + + + F
Sbjct: 159 EDAHEFLMFTVDAMKK------ACLPGHKQVDHHSKDTTL-------------IHQIFGG 199
Query: 431 ELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE----YNC 486
+ + C C +P YL I L + S+Q +L+ K EEL Y+C
Sbjct: 200 YWRSQIKCLHCHGISDTFDP--YLDIALDIQAAQ---SVQQALEQLVKPEELNGENAYHC 254
Query: 487 QMCKQKSCVARH-TFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNEST 545
+C Q++ ++ T ++VLI+ LKR+S + KN V P+ L + Y ++
Sbjct: 255 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN---VQYPECLDMQPYMSQPN 311
Query: 546 KPPL 549
PL
Sbjct: 312 TGPL 315
Score = 35.4 bits (80), Expect = 0.25
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 823 YRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFY 882
Y L +V+ H G S ++GHY S V Q+ W+ +D +E++ + + Y+ FY
Sbjct: 317 YVLYAVLVHAGWSCHNGHYFSYV-KAQEGQWYKMDD---AEVTASSITSVLSQQAYVLFY 372
Query: 883 MHNGIFEELLRKAENSRLP 901
+ +E R P
Sbjct: 373 IQKSEWERHSESVSRGREP 391
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,608,464
Number of Sequences: 37866
Number of extensions: 1666804
Number of successful extensions: 4018
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3709
Number of HSP's gapped (non-prelim): 268
length of query: 922
length of database: 18,247,518
effective HSP length: 112
effective length of query: 810
effective length of database: 14,006,526
effective search space: 11345286060
effective search space used: 11345286060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.