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Search of human proteins with 10092647
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens]
(301 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens] 612 e-175
gi|188536108 cardiolipin synthase 1 isoform 2 [Homo sapiens] 395 e-110
gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo sapiens] 35 0.081
gi|5453906 CDP-diacylglycerol-inositol 3-phosphatidyltransferase... 34 0.18
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 34 0.18
gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] 33 0.24
gi|45387945 family with sequence similarity 62 (C2 domain contai... 33 0.31
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 33 0.31
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 33 0.31
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 33 0.31
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 33 0.31
gi|7706435 headcase [Homo sapiens] 33 0.40
gi|169164558 PREDICTED: hypothetical protein [Homo sapiens] 32 0.53
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ... 32 0.53
gi|239748011 PREDICTED: hypothetical protein [Homo sapiens] 32 0.53
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ... 32 0.53
gi|169163356 PREDICTED: hypothetical protein [Homo sapiens] 32 0.53
gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 32 0.53
gi|239755134 PREDICTED: hypothetical protein [Homo sapiens] 32 0.69
gi|239754271 PREDICTED: hypothetical protein [Homo sapiens] 32 0.69
gi|239749639 PREDICTED: hypothetical protein [Homo sapiens] 32 0.69
gi|239748805 PREDICTED: hypothetical protein XP_002346828 [Homo ... 32 0.69
gi|239743912 PREDICTED: hypothetical protein XP_002342972 [Homo ... 32 0.69
gi|239742844 PREDICTED: hypothetical protein XP_002342661 [Homo ... 32 0.69
gi|239740900 PREDICTED: hypothetical protein XP_002344096 [Homo ... 32 0.69
gi|148727370 immediate early response 5-like [Homo sapiens] 32 0.69
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 32 0.90
gi|239745938 PREDICTED: hypothetical protein [Homo sapiens] 32 0.90
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 32 0.90
gi|148536864 SWI/SNF-related matrix-associated actin-dependent r... 32 0.90
>gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens]
Length = 301
Score = 612 bits (1577), Expect = e-175
Identities = 301/301 (100%), Positives = 301/301 (100%)
Query: 1 MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRL 60
MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRL
Sbjct: 1 MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRL 60
Query: 61 PGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTPSLYENPWTIPNMLSMTRIGL 120
PGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTPSLYENPWTIPNMLSMTRIGL
Sbjct: 61 PGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTPSLYENPWTIPNMLSMTRIGL 120
Query: 121 APVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL 180
APVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL
Sbjct: 121 APVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL 180
Query: 181 YVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLKPTF 240
YVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLKPTF
Sbjct: 181 YVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLKPTF 240
Query: 241 ISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTAASAYSYYHYGRKTVQVIK 300
ISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTAASAYSYYHYGRKTVQVIK
Sbjct: 241 ISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTAASAYSYYHYGRKTVQVIK 300
Query: 301 D 301
D
Sbjct: 301 D 301
>gi|188536108 cardiolipin synthase 1 isoform 2 [Homo sapiens]
Length = 202
Score = 395 bits (1016), Expect = e-110
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 103 YENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRS 162
YENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRS
Sbjct: 4 YENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRS 63
Query: 163 ALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRT 222
ALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRT
Sbjct: 64 ALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRT 123
Query: 223 LAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTA 282
LAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTA
Sbjct: 124 LAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTA 183
Query: 283 ASAYSYYHYGRKTVQVIKD 301
ASAYSYYHYGRKTVQVIKD
Sbjct: 184 ASAYSYYHYGRKTVQVIKD 202
>gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo sapiens]
Length = 683
Score = 35.0 bits (79), Expect = 0.081
Identities = 31/88 (35%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 41 CLGCL--AERWRLRPAA-LGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPA 97
C G L AE L AA +GL P G+R G+ P P AGA A GG W
Sbjct: 6 CRGSLNEAEAGALPAAARMGLEAPRGGRRRQ---PGQQRPGPGAGAPAGRPEGGGPWART 62
Query: 98 STPSLYENPWTIPNMLSMTRIGLAPVLG 125
SL+ P R GL P G
Sbjct: 63 EGSSLHSEP---------ERAGLGPAPG 81
>gi|5453906 CDP-diacylglycerol-inositol 3-phosphatidyltransferase
[Homo sapiens]
Length = 213
Score = 33.9 bits (76), Expect = 0.18
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 109 IPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSAL 168
+PN++ RI A ++ + + A + L+GL D DG AR NQ + G+ L
Sbjct: 10 VPNLIGYARIVFA-IISFYFMPCCPLTASSFYLLSGLLDAFDGHAARA-LNQGTRFGAML 67
Query: 169 DPLADKILISILYVSL 184
D L D+ L V+L
Sbjct: 68 DMLTDRCSTMCLLVNL 83
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 33.9 bits (76), Expect = 0.18
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 75 AAPRPAAGAGAAAEAPGGQWGPASTPSLYEN-----PWTIPNMLSMTRIGLAPVLGYLII 129
AAP A AG+ A G + GPAS S PW +P + T G+ + L
Sbjct: 1053 AAPSTAPSAGSTAGDSGAEDGPASRVSQLPTLPPPMPWNLPAGVDCTTSGVLALTALLFK 1112
Query: 130 EEDFNIA 136
E+ N+A
Sbjct: 1113 MEEANLA 1119
>gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens]
Length = 334
Score = 33.5 bits (75), Expect = 0.24
Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 28/109 (25%)
Query: 33 ALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHCSGA-----------GKAAPRPAA 81
ALLPP C G L R G LP +G A G A+P P A
Sbjct: 195 ALLPP--CATGALGSALR------GPSLPALGAGAAAGSAAAAAAAAPGPAGAASPHPPA 246
Query: 82 GAGAAAEAPGGQWG-----PASTPSLYENPWTIPNMLS--MTRIGLAPV 123
GA P G G PA+ SL+ P +P++L +R+ AP+
Sbjct: 247 VGGAPGPGPAGPGGLHAGAPAAGHSLFSLP--VPSLLGSVASRLSSAPL 293
>gi|45387945 family with sequence similarity 62 (C2 domain
containing) member B [Homo sapiens]
Length = 893
Score = 33.1 bits (74), Expect = 0.31
Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 48 RWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTPSLYENPW 107
RWR G PGI + AG+AA A +GA E P G A + ENP
Sbjct: 21 RWR------GAEPPGISASTQPASAGRAARHCGAMSGARGEGPEAGAGGAGGRAAPENP- 73
Query: 108 TIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGL 145
+LS+ GL L F + L V+AL L
Sbjct: 74 --GGVLSVELPGLLAQLA-----RSFALLLPVYALGYL 104
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 33.1 bits (74), Expect = 0.31
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Query: 50 RLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAPG----GQWGPAS 98
RLRPAA G R PG CS A +A+P PAA AA APG G GP S
Sbjct: 118 RLRPAAPGPR-PG------CSSA-RASPAPAAPQAAARTAPGRAASGGSGPGS 162
>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
sapiens]
Length = 209
Score = 33.1 bits (74), Expect = 0.31
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Query: 50 RLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAPG----GQWGPAS 98
RLRPAA G R PG CS A +A+P PAA AA APG G GP S
Sbjct: 118 RLRPAAPGPR-PG------CSSA-RASPAPAAPQAAARTAPGRAASGGSGPGS 162
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 33.1 bits (74), Expect = 0.31
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Query: 50 RLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAPG----GQWGPAS 98
RLRPAA G R PG CS A +A+P PAA AA APG G GP S
Sbjct: 118 RLRPAAPGPR-PG------CSSA-RASPAPAAPQAAARTAPGRAASGGSGPGS 162
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 33.1 bits (74), Expect = 0.31
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Query: 50 RLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAPG----GQWGPAS 98
RLRPAA G R PG CS A +A+P PAA AA APG G GP S
Sbjct: 118 RLRPAAPGPR-PG------CSSA-RASPAPAAPQAAARTAPGRAASGGSGPGS 162
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 32.7 bits (73), Expect = 0.40
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 43 GCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTP 100
G LA AA G PG G GAG A AA AGAAA P +TP
Sbjct: 42 GALAAAAGCGAAAAGA--PGAGGAAGAGGAGTGAANAAAAAGAAAAGDAKNEAPCATP 97
>gi|169164558 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 32.3 bits (72), Expect = 0.53
Identities = 33/104 (31%), Positives = 38/104 (36%), Gaps = 12/104 (11%)
Query: 8 RGSWGALRGAAWAP-GTR----PSKRR----ACWALLPPVPCCLGCLAERWRLRPAALGL 58
RGS G W+P GTR P+ R A A P C AE+ P+
Sbjct: 19 RGSSGGAASPPWSPAGTRRWPAPASSRPLVPAARAADSPSEACTVSAAEKASSEPSLARK 78
Query: 59 RLPGIGQRNHCSGAGKAAPRPAAGAGA--AAEAPGGQWGPASTP 100
LP S K P P +G GA A A WG A P
Sbjct: 79 PLPSSASACSASALSKLPP-PGSGCGANLRAAAASWCWGDAEKP 121
>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
sapiens]
Length = 261
Score = 32.3 bits (72), Expect = 0.53
Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 26/112 (23%)
Query: 7 ARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRL------ 60
AR GAL G RP + W LL C + R R RP L L L
Sbjct: 130 ARAEGGALHG-------RPGRDARPWRLLS------ACPSGRPRPRPLPLPLMLMLMLPT 176
Query: 61 ------PGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTPSLYENP 106
PG +R AG+ PA G+ PG P++ P+ + P
Sbjct: 177 LQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPS-SPSAAPTSHPPP 227
>gi|239748011 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 32.3 bits (72), Expect = 0.53
Identities = 33/104 (31%), Positives = 38/104 (36%), Gaps = 12/104 (11%)
Query: 8 RGSWGALRGAAWAP-GTR----PSKRR----ACWALLPPVPCCLGCLAERWRLRPAALGL 58
RGS G W+P GTR P+ R A A P C AE+ P+
Sbjct: 19 RGSSGGAASPPWSPAGTRRWPAPASSRPLVPAARAADSPSEACTVSAAEKASSEPSLARK 78
Query: 59 RLPGIGQRNHCSGAGKAAPRPAAGAGA--AAEAPGGQWGPASTP 100
LP S K P P +G GA A A WG A P
Sbjct: 79 PLPSSASACSASALSKLPP-PGSGCGANLRAAAASWCWGDAEKP 121
>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
sapiens]
Length = 261
Score = 32.3 bits (72), Expect = 0.53
Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 26/112 (23%)
Query: 7 ARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRL------ 60
AR GAL G RP + W LL C + R R RP L L L
Sbjct: 130 ARAEGGALHG-------RPGRDARPWRLLS------ACPSGRPRPRPLPLPLMLMLMLPT 176
Query: 61 ------PGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTPSLYENP 106
PG +R AG+ PA G+ PG P++ P+ + P
Sbjct: 177 LQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPS-SPSAAPTSHPPP 227
>gi|169163356 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 32.3 bits (72), Expect = 0.53
Identities = 33/104 (31%), Positives = 38/104 (36%), Gaps = 12/104 (11%)
Query: 8 RGSWGALRGAAWAP-GTR----PSKRR----ACWALLPPVPCCLGCLAERWRLRPAALGL 58
RGS G W+P GTR P+ R A A P C AE+ P+
Sbjct: 19 RGSSGGAASPPWSPAGTRRWPAPASSRPLVPAARAADSPSEACTVSAAEKASSEPSLARK 78
Query: 59 RLPGIGQRNHCSGAGKAAPRPAAGAGA--AAEAPGGQWGPASTP 100
LP S K P P +G GA A A WG A P
Sbjct: 79 PLPSSASACSASALSKLPP-PGSGCGANLRAAAASWCWGDAEKP 121
>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
Length = 193
Score = 32.3 bits (72), Expect = 0.53
Identities = 32/116 (27%), Positives = 37/116 (31%), Gaps = 16/116 (13%)
Query: 11 WGALRG----AAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQR 66
WG RG AA PG R + C A C C RP L+ PG G
Sbjct: 49 WGPQRGPRNAAAARPGPRSRWHKRCAA------ACGACA------RPPGHQLQPPGAGAP 96
Query: 67 NHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTPSLYENPWTIPNMLSMTRIGLAP 122
PRP +A PG GP + P P R G +P
Sbjct: 97 QPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
>gi|239755134 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 32.0 bits (71), Expect = 0.69
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 4 LRVARGSWGALRG----AAWAPGTRPSKRRACWALLPPVP--CCLGCLAERWRLRPAALG 57
+R + G + G A+W +P L PPVP C L LA RW LG
Sbjct: 12 IRASNGQFELFTGNTHTASWKGIKKPHVVDLGLYLQPPVPHVCSLQRLASRWMQVRDPLG 71
Query: 58 LRLPGIGQRNHCSGAG-KAAPRP-AAGAGAAAEAPGG----QWGPAS 98
L L G+ + S +A P A+ AG AP G + GPA+
Sbjct: 72 LGLGASGRADVGSAMSCRAGSSPGASSAGQGCRAPPGRERARLGPAA 118
>gi|239754271 PREDICTED: hypothetical protein [Homo sapiens]
Length = 125
Score = 32.0 bits (71), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 32 WALLPPVPCCLGCL--AERWRLRPAALGLRL-PGIGQRNHCSG 71
W L P PC GCL A R + +P LGL + +G + H SG
Sbjct: 55 WPLSLPPPCWTGCLLPAPRGQRKPGPLGLSIFISLGNKRHRSG 97
>gi|239749639 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 32.0 bits (71), Expect = 0.69
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 4 LRVARGSWGALRG----AAWAPGTRPSKRRACWALLPPVP--CCLGCLAERWRLRPAALG 57
+R + G + G A+W +P L PPVP C L LA RW LG
Sbjct: 12 IRASNGQFELFTGNTHTASWKGIKKPHVVDLGLYLQPPVPHVCSLQRLASRWMQVRDPLG 71
Query: 58 LRLPGIGQRNHCSGAG-KAAPRP-AAGAGAAAEAPGG----QWGPAS 98
L L G+ + S +A P A+ AG AP G + GPA+
Sbjct: 72 LGLGASGRADVGSAMSCRAGSSPGASSAGQGCRAPPGRERARLGPAA 118
>gi|239748805 PREDICTED: hypothetical protein XP_002346828 [Homo
sapiens]
Length = 125
Score = 32.0 bits (71), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 32 WALLPPVPCCLGCL--AERWRLRPAALGLRL-PGIGQRNHCSG 71
W L P PC GCL A R + +P LGL + +G + H SG
Sbjct: 55 WPLSLPPPCWTGCLLPAPRGQRKPGPLGLSIFISLGNKRHRSG 97
>gi|239743912 PREDICTED: hypothetical protein XP_002342972 [Homo
sapiens]
Length = 180
Score = 32.0 bits (71), Expect = 0.69
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 4 LRVARGSWGALRG----AAWAPGTRPSKRRACWALLPPVP--CCLGCLAERWRLRPAALG 57
+R + G + G A+W +P L PPVP C L LA RW LG
Sbjct: 12 IRASNGQFELFTGNTHTASWKGIKKPHVVDLGLYLQPPVPHVCSLQRLASRWMQVRDPLG 71
Query: 58 LRLPGIGQRNHCSGAG-KAAPRP-AAGAGAAAEAPGG----QWGPAS 98
L L G+ + S +A P A+ AG AP G + GPA+
Sbjct: 72 LGLGASGRADVGSAMSCRAGSSPGASSAGQGCRAPPGRERARLGPAA 118
>gi|239742844 PREDICTED: hypothetical protein XP_002342661 [Homo
sapiens]
Length = 125
Score = 32.0 bits (71), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 32 WALLPPVPCCLGCL--AERWRLRPAALGLRL-PGIGQRNHCSG 71
W L P PC GCL A R + +P LGL + +G + H SG
Sbjct: 55 WPLSLPPPCWTGCLLPAPRGQRKPGPLGLSIFISLGNKRHRSG 97
>gi|239740900 PREDICTED: hypothetical protein XP_002344096 [Homo
sapiens]
Length = 125
Score = 32.0 bits (71), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 32 WALLPPVPCCLGCL--AERWRLRPAALGLRL-PGIGQRNHCSG 71
W L P PC GCL A R + +P LGL + +G + H SG
Sbjct: 55 WPLSLPPPCWTGCLLPAPRGQRKPGPLGLSIFISLGNKRHRSG 97
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 32.0 bits (71), Expect = 0.69
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 7 ARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCC-LGCLAERWRLRPAALGLRLP---- 61
A + GA G A A P C AL PP G E + PA L L LP
Sbjct: 139 AAAAAGAPAGGAGALSELPG----CAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAP 194
Query: 62 -GIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQWGPASTPSLYENPWTIPN 111
+ R+ + A +AP P A AAA +P PAS+P Y + P+
Sbjct: 195 AALCPRDPRAPAACSAP-PGAAPPAAAASPPASPAPASSPGFYRGAYPTPS 244
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 31.6 bits (70), Expect = 0.90
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 16 GAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHC-SGAGK 74
GAAW R + R AL P G + + +RP RLP G+R G G
Sbjct: 8 GAAWRRVARAGRARLYKAL----PIAGGAVVDV-EVRPRPPPARLPRNGRRGPLWKGRGP 62
Query: 75 AAPRPAAGAGAAAEAPGGQWGPASTPSLYENP 106
A PAA A A P P + PS +P
Sbjct: 63 AGRAPAASAETALPRPREPPEPGAGPSPKRSP 94
>gi|239745938 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 31.6 bits (70), Expect = 0.90
Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 18/94 (19%)
Query: 9 GSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNH 68
G GA GA G + S A CLGCL + G + G+R
Sbjct: 225 GGGGAGAGAGAGAGAQRSAAEAAG--------CLGCLPRLPLMSEPRTGEK----GKRRR 272
Query: 69 CSGAGKAAPRPAAGAGAAAEAPGGQ------WGP 96
G G R AG +AEA GG+ WGP
Sbjct: 273 RDGRGWGGLRGRAGGPRSAEAGGGKRLIPNCWGP 306
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 31.6 bits (70), Expect = 0.90
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 43 GCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGA-AAEAPGGQWGPA 97
GC+ RL+ GL +G G G AA A GAGA PGG GPA
Sbjct: 32 GCMGPASRLQDGEYGLGCL-VGGAYTYGGGGSAAATGAGGAGAYGTGGPGGPGGPA 86
>gi|148536864 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d2 isoform 1 [Homo sapiens]
Length = 531
Score = 31.6 bits (70), Expect = 0.90
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 35 LPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAPGGQW 94
LPP+ G +A AALG P G G P PA G G A
Sbjct: 11 LPPLSPGGGAVA-------AALGAPPPPAGP-GMLPGPALRGPGPAGGVGGPGAAAFRPM 62
Query: 95 GPASTPSLYENPWTIP-NMLSMTRIGLAPVLG 125
GPA + Y+ P P N + M + + P G
Sbjct: 63 GPAGPAAQYQRPGMSPGNRMPMAGLQVGPPAG 94
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,620,115
Number of Sequences: 37866
Number of extensions: 578049
Number of successful extensions: 3958
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 3809
Number of HSP's gapped (non-prelim): 215
length of query: 301
length of database: 18,247,518
effective HSP length: 102
effective length of query: 199
effective length of database: 14,385,186
effective search space: 2862652014
effective search space used: 2862652014
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.