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Search of human proteins with 186928835
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|186928835 leprecan 1 isoform 1 [Homo sapiens]
(736 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|186928835 leprecan 1 isoform 1 [Homo sapiens] 1492 0.0
gi|226371643 leprecan 1 isoform 2 [Homo sapiens] 1393 0.0
gi|27764882 leprecan-like 1 isoform a [Homo sapiens] 667 0.0
gi|28466983 leprecan-like 2 [Homo sapiens] 562 e-160
gi|197313662 leprecan-like 1 isoform b [Homo sapiens] 542 e-154
gi|5453601 cartilage associated protein precursor [Homo sapiens] 214 2e-55
gi|5454038 synaptonemal complex protein SC65 [Homo sapiens] 187 2e-47
gi|239753578 PREDICTED: similar to cartilage associated protein ... 75 3e-13
gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens] 58 3e-08
gi|33589818 prolyl 4-hydroxylase, alpha III subunit precursor [H... 37 0.066
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens] 35 0.25
gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens] 33 0.95
gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens] 33 0.95
gi|13489073 egl nine homolog 1 [Homo sapiens] 33 0.95
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 33 1.2
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 33 1.2
gi|47132519 Ras association and pleckstrin homology domains 1 is... 32 1.6
gi|47519562 reticulon 4 isoform E [Homo sapiens] 32 2.8
gi|24431935 reticulon 4 isoform A [Homo sapiens] 32 2.8
gi|56549696 E1A binding protein p400 [Homo sapiens] 32 2.8
gi|83921609 hypothetical protein LOC127254 [Homo sapiens] 32 2.8
gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... 31 4.7
gi|63252886 prolyl 4-hydroxylase, alpha I subunit isoform 1 prec... 31 4.7
gi|217272851 prolyl 4-hydroxylase, alpha I subunit isoform 3 pre... 31 4.7
gi|217272849 prolyl 4-hydroxylase, alpha I subunit isoform 2 pre... 31 4.7
gi|63252888 prolyl 4-hydroxylase, alpha I subunit isoform 2 prec... 31 4.7
gi|11545787 egl nine homolog 3 [Homo sapiens] 30 6.2
gi|9789865 eukaryotic translation initiation factor 4E nuclear i... 30 6.2
gi|157671947 hypothetical protein LOC79974 isoform 2 [Homo sapiens] 30 8.0
gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens] 30 8.0
>gi|186928835 leprecan 1 isoform 1 [Homo sapiens]
Length = 736
Score = 1492 bits (3863), Expect = 0.0
Identities = 736/736 (100%), Positives = 736/736 (100%)
Query: 1 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER 60
MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER
Sbjct: 1 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER 60
Query: 61 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL 120
ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL
Sbjct: 61 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL 120
Query: 121 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ 180
RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ
Sbjct: 121 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ 180
Query: 181 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE 240
QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE
Sbjct: 181 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE 240
Query: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL 300
ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL
Sbjct: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL 300
Query: 301 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE 360
PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE
Sbjct: 301 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE 360
Query: 361 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE 420
SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE
Sbjct: 361 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE 420
Query: 421 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD 480
IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD
Sbjct: 421 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD 480
Query: 481 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN 540
HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN
Sbjct: 481 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN 540
Query: 541 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC 600
VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC
Sbjct: 541 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC 600
Query: 601 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG 660
VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG
Sbjct: 601 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG 660
Query: 661 VKAVTRGQRCAIALWFTLDPRHSERDRVQADDLVKMLFSPEEMDLSQEQPLDAQQGPPEP 720
VKAVTRGQRCAIALWFTLDPRHSERDRVQADDLVKMLFSPEEMDLSQEQPLDAQQGPPEP
Sbjct: 661 VKAVTRGQRCAIALWFTLDPRHSERDRVQADDLVKMLFSPEEMDLSQEQPLDAQQGPPEP 720
Query: 721 AQESLSGSESKPKDEL 736
AQESLSGSESKPKDEL
Sbjct: 721 AQESLSGSESKPKDEL 736
>gi|226371643 leprecan 1 isoform 2 [Homo sapiens]
Length = 697
Score = 1393 bits (3606), Expect = 0.0
Identities = 686/687 (99%), Positives = 686/687 (99%)
Query: 1 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER 60
MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER
Sbjct: 1 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER 60
Query: 61 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL 120
ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL
Sbjct: 61 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL 120
Query: 121 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ 180
RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ
Sbjct: 121 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ 180
Query: 181 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE 240
QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE
Sbjct: 181 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE 240
Query: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL 300
ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL
Sbjct: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL 300
Query: 301 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE 360
PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE
Sbjct: 301 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE 360
Query: 361 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE 420
SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE
Sbjct: 361 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE 420
Query: 421 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD 480
IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD
Sbjct: 421 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD 480
Query: 481 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN 540
HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN
Sbjct: 481 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN 540
Query: 541 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC 600
VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC
Sbjct: 541 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC 600
Query: 601 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG 660
VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG
Sbjct: 601 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG 660
Query: 661 VKAVTRGQRCAIALWFTLDPRHSERDR 687
VKAVTRGQRCAIALWFTLDPRHSER R
Sbjct: 661 VKAVTRGQRCAIALWFTLDPRHSERVR 687
>gi|27764882 leprecan-like 1 isoform a [Homo sapiens]
Length = 708
Score = 667 bits (1720), Expect = 0.0
Identities = 338/668 (50%), Positives = 442/668 (66%), Gaps = 28/668 (4%)
Query: 36 DLLFAEGTAAYARGDWPGVVLSMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSP 95
DLL+A G AAY GD+ V +E ALRS LR +R RC CAA P L P P P
Sbjct: 45 DLLYASGAAAYYSGDYERAVRDLEAALRSHRRLREIRTRCARHCAARHP--LPP---PPP 99
Query: 96 AQASGAAALRDLSFFGGLLRRAACLRRCL-----GPPAAHSLSEEMELEFRKRSPYNYLQ 150
+ GA +L F LL RA C R C GP + H +SE++ +F++R PYNYLQ
Sbjct: 100 GEGPGA----ELPLFRSLLGRARCYRSCETQRLGGPASRHRVSEDVRSDFQRRVPYNYLQ 155
Query: 151 VAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFR 210
AY K+N+LEKAV AAHTFFV NPEHMEMQQN++ Y+ +GV+ D E +PHM+ +
Sbjct: 156 RAYIKLNQLEKAVEAAHTFFVANPEHMEMQQNIENYRATAGVEALQLVDREAKPHMESYN 215
Query: 211 LGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITD 270
GV+ Y + + A+ H E AL+EYFV ECR LCEGP ++ Y YL Y A L++AI D
Sbjct: 216 AGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIAD 275
Query: 271 HYIQVLNCKQNCVTELASHPSREKPFEDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLF 330
HY+QVL C+ CV ELA+ P R P E+FLP HY+YLQFAYY +G Y +A+ECAK YLL
Sbjct: 276 HYMQVLVCQHECVRELATRPGRLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLC 335
Query: 331 FPNDEVMNQNLAYYAAMLGEE-HTRSIGPRESAKEYRQRSLLEKELLFFAYDVFGIPFVD 389
P+DE + N+ YY ++L + SI RE + +R LE EL+ A + G + +
Sbjct: 336 HPDDEDVLDNVDYYESLLDDSIDPASIEAREDLTMFVKRHKLESELIKSAAEGLGFSYTE 395
Query: 390 PDSWTPEEVIPKRLQEKQKSERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREG 449
P+ W + R+ R+ + E+ K K S + R REG
Sbjct: 396 PNYWI------------RYGGRQDENRVPSGVNVEGAEVHGFSMGK-KLSPKIDRDLREG 442
Query: 450 GPLLYEGISLTMNSKLLNGSQRVVMDGVISDHECQELQRLTNVAATSGDGYRGQTSPHTP 509
GPLLYE I+ NS+ LNG+QRV++D V+S+ +C+EL + + GDGYRG+TSPHTP
Sbjct: 443 GPLLYENITFVYNSEQLNGTQRVLLDNVLSEEQCRELHSVASGIMLVGDGYRGKTSPHTP 502
Query: 510 NEKFYGVTVFKALKLGQEGKVPLQSAHLYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCR 569
NEKF G TV KALK G EG+VPL+SA L+Y+++EK RRI+ESYF L++ LYFSY+H+VCR
Sbjct: 503 NEKFEGATVLKALKSGYEGRVPLKSARLFYDISEKARRIVESYFMLNSTLYFSYTHMVCR 562
Query: 570 TAIEEVQAERKDDSHPVHVDNCILNAETLVCVKEPPAYTFRDYSAILYLNGDFDGGNFYF 629
TA+ Q R D SHP+H DNC+L+ E C KEPPAYTFRDYSA+LY+N DF+GG F F
Sbjct: 563 TALSGQQDRRNDLSHPIHADNCLLDPEANECWKEPPAYTFRDYSALLYMNDDFEGGEFIF 622
Query: 630 TELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTRGQRCAIALWFTLDPRHSERDRVQ 689
TE+DAKTVTA ++P+CGR + FSSG ENPHGVKAVT+G+RCA+ALWFTLDP + E +R+Q
Sbjct: 623 TEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTKGKRCAVALWFTLDPLYRELERIQ 682
Query: 690 ADDLVKML 697
AD+++ +L
Sbjct: 683 ADEVIAIL 690
>gi|28466983 leprecan-like 2 [Homo sapiens]
Length = 736
Score = 562 bits (1449), Expect = e-160
Identities = 313/706 (44%), Positives = 421/706 (59%), Gaps = 48/706 (6%)
Query: 35 PDLLFAEGTAAYARGDWPGVVLSMERALRSRAALRALRLRCRTQCAAD----FPWEL--- 87
PDLL+A+G AYA G W V + ALRS+AAL +RL C CAAD P L
Sbjct: 37 PDLLYADGLRAYAAGAWAPAVALLREALRSQAALGRVRLDCGASCAADPGAALPAVLLGA 96
Query: 88 -DPDWSPSPAQASGAAALRDLSFFGGLLRRAACLRRC----LGPPAAHSLSEEMELE--F 140
+PD P P Q S L LRRA CL +C LGP A L L F
Sbjct: 97 PEPDSGPGPTQGSWERQL-----LRAALRRADCLTQCAARRLGPGGAARLRVGSALRDAF 151
Query: 141 RKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDL 200
R+R PYNYLQ AY+++ KL+ A AAAHTFFV NP H++M++++ Y+ MSGV+ F+DL
Sbjct: 152 RRREPYNYLQRAYYQLKKLDLAAAAAHTFFVANPMHLQMREDMAKYRRMSGVRPQSFRDL 211
Query: 201 ETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEGPYDYDGYNYLEY 260
ET PH + G+ L ++ A+P LE ALQ E CRA CEGP + G E
Sbjct: 212 ETPPHWAAYDTGLELLGRQEAGLALPRLEEALQGSLAQMESCRADCEGPEEQQGAEEEED 271
Query: 261 NA----DLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFLPSHYNYLQFAYYNIGN 316
A L++AI H+IQVL C+Q CV E A+ P R P DFLP+ L A+ +GN
Sbjct: 272 GAASQGGLYEAIAGHWIQVLQCRQRCVGETATRPGRSFPVPDFLPNQLRRLHEAHAQVGN 331
Query: 317 YTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRESAKEYRQRSLLEKELL 376
+QA+E + LLF+P DE + L Y A LGE +GPRE + + RSL EK L
Sbjct: 332 LSQAIENVLSVLLFYPEDEAAKRALNQYQAQLGEPRP-GLGPREDIQRFILRSLGEKRQL 390
Query: 377 FFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQEIGNLMKEIETLVEEKT 436
++A + G F DPD WTP +IP+ L+EK + ++E
Sbjct: 391 YYAMEHLGTSFKDPDPWTPAALIPEALREKLREDQEK-------------------RPWD 431
Query: 437 KESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISDHECQELQRLTNVAATS 496
E + LT LL EG++LT +S+ LNGS+R V+DG+++ EC L +L AA +
Sbjct: 432 HEPVKPKPLTYWKDVLLLEGVTLTQDSRQLNGSERAVLDGLLTPAECGVLLQLAKDAAGA 491
Query: 497 G--DGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYNVTEKVRRIMESYFR 554
G GYRG+ SPHTP+E+F G+TV KA +L + G V Q A L V+E+VR + ++YF
Sbjct: 492 GARSGYRGRRSPHTPHERFEGLTVLKAAQLARAGTVGSQGAKLLLEVSERVRTLTQAYFS 551
Query: 555 LDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVCVKEPPAYTFRDYSA 614
+ PL+ S++HLVCR+AIE Q +R D SHPVH DNC+L+ +T C +EPPAYT+RDYS
Sbjct: 552 PERPLHLSFTHLVCRSAIEGEQEQRMDLSHPVHADNCVLDPDTGECWREPPAYTYRDYSG 611
Query: 615 ILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTRGQRCAIAL 674
+LYLN DF GG+ +FTE +A TVTA V+P+CGR V FSSG ENPHGV AVTRG+RCA+AL
Sbjct: 612 LLYLNDDFQGGDLFFTEPNALTVTARVRPRCGRLVAFSSGVENPHGVWAVTRGRRCALAL 671
Query: 675 WFTLDPRHSERDRVQADDLVKMLFSPEEMDLSQEQPLDAQQGPPEP 720
W T P H E++ ++A +L++ +E + +E+ + ++ PEP
Sbjct: 672 WHTWAPEHREQEWIEAKELLQ---ESQEEEEEEEEEMPSKDPSPEP 714
>gi|197313662 leprecan-like 1 isoform b [Homo sapiens]
Length = 527
Score = 542 bits (1397), Expect = e-154
Identities = 265/522 (50%), Positives = 354/522 (67%), Gaps = 14/522 (2%)
Query: 177 MEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYF 236
MEMQQN++ Y+ +GV+ D E +PHM+ + GV+ Y + + A+ H E AL+EYF
Sbjct: 1 MEMQQNIENYRATAGVEALQLVDREAKPHMESYNAGVKHYEADDFEMAIRHFEQALREYF 60
Query: 237 VAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPF 296
V ECR LCEGP ++ Y YL Y A L++AI DHY+QVL C+ CV ELA+ P R P
Sbjct: 61 VEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIADHYMQVLVCQHECVRELATRPGRLSPI 120
Query: 297 EDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEE-HTRS 355
E+FLP HY+YLQFAYY +G Y +A+ECAK YLL P+DE + N+ YY ++L + S
Sbjct: 121 ENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYESLLDDSIDPAS 180
Query: 356 IGPRESAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAV 415
I RE + +R LE EL+ A + G + +P+ W + R+
Sbjct: 181 IEAREDLTMFVKRHKLESELIKSAAEGLGFSYTEPNYWI------------RYGGRQDEN 228
Query: 416 RISQEIGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMD 475
R+ + E+ K K S + R REGGPLLYE I+ NS+ LNG+QRV++D
Sbjct: 229 RVPSGVNVEGAEVHGFSMGK-KLSPKIDRDLREGGPLLYENITFVYNSEQLNGTQRVLLD 287
Query: 476 GVISDHECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSA 535
V+S+ +C+EL + + GDGYRG+TSPHTPNEKF G TV KALK G EG+VPL+SA
Sbjct: 288 NVLSEEQCRELHSVASGIMLVGDGYRGKTSPHTPNEKFEGATVLKALKSGYEGRVPLKSA 347
Query: 536 HLYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNA 595
L+Y+++EK RRI+ESYF L++ LYFSY+H+VCRTA+ Q R D SHP+H DNC+L+
Sbjct: 348 RLFYDISEKARRIVESYFMLNSTLYFSYTHMVCRTALSGQQDRRNDLSHPIHADNCLLDP 407
Query: 596 ETLVCVKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGT 655
E C KEPPAYTFRDYSA+LY+N DF+GG F FTE+DAKTVTA ++P+CGR + FSSG
Sbjct: 408 EANECWKEPPAYTFRDYSALLYMNDDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGG 467
Query: 656 ENPHGVKAVTRGQRCAIALWFTLDPRHSERDRVQADDLVKML 697
ENPHGVKAVT+G+RCA+ALWFTLDP + E +R+QAD+++ +L
Sbjct: 468 ENPHGVKAVTKGKRCAVALWFTLDPLYRELERIQADEVIAIL 509
Score = 40.4 bits (93), Expect = 0.006
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 146 YNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTM 189
Y+YLQ AY+++ + KA+ A + + +P+ ++ N+DYY+++
Sbjct: 128 YDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYESL 171
>gi|5453601 cartilage associated protein precursor [Homo sapiens]
Length = 401
Score = 214 bits (545), Expect = 2e-55
Identities = 141/391 (36%), Positives = 203/391 (51%), Gaps = 36/391 (9%)
Query: 4 RALKLLTTLLAVVAA--ASQAEVESEAGWGMVTPDLL-----FAEGTAAYARGDWPGVVL 56
R L LL V A A +A+ E + +L+ + Y+ W V
Sbjct: 6 RGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHWAESVG 65
Query: 57 SMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRR 116
+E +LR LR C C+A +P P A+G A+ +L FGGLLRR
Sbjct: 66 YLEISLRLHRLLRDSEAFCHRNCSA----------APQPEPAAGLASYPELRLFGGLLRR 115
Query: 117 AACLRRCL-GPPAAHSL--SEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGN 173
A CL+RC G PA S E+ +F++R PY +LQ AYFK N L KA+AAAHTF + +
Sbjct: 116 AHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKANNLPKAIAAAHTFLLKH 175
Query: 174 PEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQ 233
P+ M++N+ YY+++ G ++ KDLET+ + F VR Y+ E + ++ +E AL
Sbjct: 176 PDDEMMKRNMAYYKSLPGAEDY-IKDLETKSYESLFIRAVRAYNGENWRTSITDMELALP 234
Query: 234 EYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSRE 293
++F A+ EC A CEG + + D + +I DHY++VL CK C L +
Sbjct: 235 DFFKAFYECLAACEGSREIKDFK------DFYLSIADHYVEVLECKIQCEENL-TPVIGG 287
Query: 294 KPFEDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAM-----L 348
P E F+ + Y+YLQFAYY + + A CA +YLLF ND+VM QNL YY L
Sbjct: 288 YPVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTWGL 347
Query: 349 GEEHTRSIGPRESAKEYRQRSLLEKELLFFA 379
+EH + PR A ++ + L+KEL FA
Sbjct: 348 SDEHFQ---PRPEAVQFFNVTTLQKELYDFA 375
>gi|5454038 synaptonemal complex protein SC65 [Homo sapiens]
Length = 437
Score = 187 bits (476), Expect = 2e-47
Identities = 131/382 (34%), Positives = 182/382 (47%), Gaps = 28/382 (7%)
Query: 12 LLAVVAAASQAEVESEAGWGMVTPDLL-----FAEGTAAYARGDWPGVVLSMERALRSRA 66
LL ++ ++ A+ E + G DL+ + Y W +E ALR
Sbjct: 8 LLWLLLGSAGAQYEKYSFRGFPPEDLMPLAAAYGHALEQYEGESWRESARYLEAALRLHR 67
Query: 67 ALRALRLRCRTQCAADFPW-ELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACLRRCLG 125
LR C C+ P + DPD + A +L FG +L RAACLRRC
Sbjct: 68 LLRDSEAFCHANCSGPAPAAKPDPDGGRADEWAC------ELRLFGRVLERAACLRRCKR 121
Query: 126 PPAAHSLS---EEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQN 182
A + ++ +F+ R PY YL A FK N+LEKAVAAA+TF NP+H +
Sbjct: 122 TLPAFQVPYPPRQLLRDFQSRLPYQYLHYALFKANRLEKAVAAAYTFLQRNPKHELTAKY 181
Query: 183 LDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEEC 242
L+YYQ M V + DLE QP+ F V+LY+ + + +E AL EY + C
Sbjct: 182 LNYYQGMLDVADESLTDLEAQPYEAVFLRAVKLYNSGDFRSSTEDMERALSEYLAVFARC 241
Query: 243 RALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFED-FLP 301
A CEG ++ + D + AI D + + L CK +C L P+ F D F+
Sbjct: 242 LAGCEGAHEQVDFK------DFYPAIADLFAESLQCKVDCEANLT--PNVGGYFVDKFVA 293
Query: 302 SHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYY---AAMLGEEHTRSIGP 358
+ Y+YLQFAYY + + QA A +Y+LF P D VM QNL YY A G E P
Sbjct: 294 TMYHYLQFAYYKLNDVRQAARSAASYMLFDPKDSVMQQNLVYYRFHRARWGLEE-EDFQP 352
Query: 359 RESAKEYRQRSLLEKELLFFAY 380
RE A Y ++ +ELL F +
Sbjct: 353 REEAMLYHNQTAELRELLEFTH 374
>gi|239753578 PREDICTED: similar to cartilage associated protein
[Homo sapiens]
Length = 241
Score = 74.7 bits (182), Expect = 3e-13
Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 4 RALKLLTTLLAVVAA--ASQAEVESEAGWGMVTPDLL-----FAEGTAAYARGDWPGVVL 56
R L LL V A A +A+ E + +L+ + Y+ W V
Sbjct: 6 RGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHWAESVG 65
Query: 57 SMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRR 116
+E +LR LR C C+A +P P A+G A+ +L FGGLLRR
Sbjct: 66 YLEISLRLHRLLRDSEAFCHRNCSA----------APQPEPAAGLASYPELRLFGGLLRR 115
Query: 117 AACLRRC-LGPPAAHSL--SEEMELEFRKRSPYNYLQVAYFKINKLEK 161
A CL+RC G PA S E+ +F++R PY +LQ AYFK N L K
Sbjct: 116 AHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKANNLPK 163
Score = 33.1 bits (74), Expect = 0.95
Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 5/121 (4%)
Query: 201 ETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEE---CRALCEG-PYDYDGYN 256
E P +R + YS E E+V +LE +L+ + + + C C P
Sbjct: 40 ELMPLESAYRHALDKYSGEHWAESVGYLEISLRLHRLLRDSEAFCHRNCSAAPQPEPAAG 99
Query: 257 YLEY-NADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFLPSHYNYLQFAYYNIG 315
Y LF + + CKQ S PSRE + Y +LQFAY+
Sbjct: 100 LASYPELRLFGGLLRRAHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKAN 159
Query: 316 N 316
N
Sbjct: 160 N 160
>gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens]
Length = 319
Score = 58.2 bits (139), Expect = 3e-08
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 28/157 (17%)
Query: 537 LYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHP----VHVDNCI 592
LY V +KV+ + F + S HL T + + +H HVD
Sbjct: 180 LYREVRQKVQLTIAEAFGISA----SSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKV- 234
Query: 593 LNAETLVCVKEPPAYTFRDYSAILYLNG---DFDGGNFYFTELDAKTVTAEVQPQCGRAV 649
Y DY+++LYL+ DF GG F F E A V+P+ GR
Sbjct: 235 -------------TYGSFDYTSLLYLSNYLEDFGGGRFMFMEEGANKT---VEPRAGRVS 278
Query: 650 GFSSGTENPHGVKAVTRGQRCAIALWFTLDPRHSERD 686
F+SG+EN H V+ V G R AI + F+ +P H D
Sbjct: 279 FFTSGSENLHRVEKVHWGTRYAITIAFSCNPDHGIED 315
>gi|33589818 prolyl 4-hydroxylase, alpha III subunit precursor [Homo
sapiens]
Length = 544
Score = 37.0 bits (84), Expect = 0.066
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 297 EDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGE 350
E L ++L FAY+ GN + A+ ++ +LL+ P+++ M +N+ Y +L E
Sbjct: 223 EASLEDALDHLAFAYFRAGNVSCALSLSREFLLYSPDNKRMARNVLKYERLLAE 276
>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
Length = 857
Score = 35.0 bits (79), Expect = 0.25
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 396 EEVIPKRLQEKQK--SERETAVRISQEIGNLMKEIETLVEEKTKES 439
EE+I K QEK++ ++RE A+ +++++ KEI+TL+ KT +S
Sbjct: 194 EELIAKSKQEKRERQAQREDALELTEKLDQDWKEIQTLLSHKTPKS 239
>gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens]
Length = 407
Score = 33.1 bits (74), Expect = 0.95
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Query: 610 RDYSAILYLNGDFD---GGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666
R + I YLN ++D G + + V A ++P R + F S NPH VK
Sbjct: 306 RCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKP-AY 364
Query: 667 GQRCAIALWFTLDPRHSERDRVQADDLVKMLFSPEEMDLSQEQP 710
R AI +W+ ++R A D ++ + + + QP
Sbjct: 365 ATRYAITVWY-----FDAKERAAAKDKYQLASGQKGVQVPVSQP 403
>gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens]
Length = 407
Score = 33.1 bits (74), Expect = 0.95
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Query: 610 RDYSAILYLNGDFD---GGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666
R + I YLN ++D G + + V A ++P R + F S NPH VK
Sbjct: 306 RCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKP-AY 364
Query: 667 GQRCAIALWFTLDPRHSERDRVQADDLVKMLFSPEEMDLSQEQP 710
R AI +W+ ++R A D ++ + + + QP
Sbjct: 365 ATRYAITVWY-----FDAKERAAAKDKYQLASGQKGVQVPVSQP 403
>gi|13489073 egl nine homolog 1 [Homo sapiens]
Length = 426
Score = 33.1 bits (74), Expect = 0.95
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 610 RDYSAILYLNGDFDG---GNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666
R + I YLN D+D G + K A+++P+ R + F S NPH V+
Sbjct: 322 RCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQP-AY 380
Query: 667 GQRCAIALWF 676
R AI +W+
Sbjct: 381 ATRYAITVWY 390
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 32.7 bits (73), Expect = 1.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 409 SERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREG 449
SE +V+ + GN+ K+++ + EK KESLD + + + G
Sbjct: 1612 SESNVSVKEEESSGNISKDLKDKIVEKAKESLDTAAVVQVG 1652
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 32.7 bits (73), Expect = 1.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 409 SERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREG 449
SE +V+ + GN+ K+++ + EK KESLD + + + G
Sbjct: 1646 SESNVSVKEEESSGNISKDLKDKIVEKAKESLDTAAVVQVG 1686
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 32.3 bits (72), Expect = 1.6
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 652 SSGTENPHGVKAVTRGQRCAIALWFTLDPRHSERDRVQADDLVKMLFSPEEMDLSQEQPL 711
+S T +P G K QR + ++ + H E R D LV P E ++ L
Sbjct: 960 TSKTSSPGGKKPPPTPQRNS-SIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETL 1018
Query: 712 DAQQGPPEPAQESLSG 727
PP+P + +LSG
Sbjct: 1019 PPPAAPPKPGKLNLSG 1034
>gi|47519562 reticulon 4 isoform E [Homo sapiens]
Length = 986
Score = 31.6 bits (70), Expect = 2.8
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 338 NQNLAYYAAMLGEEHTRSIGPRESAKEYRQRS---LLEKELLFFA---YDVFGIPF-VDP 390
++ L + +L E T E++KE +++ L++++L F+ Y G F V P
Sbjct: 43 HEYLGNLSTVLPTEGTLQENVSEASKEVSEKAKTLLIDRDLTEFSELEYSEMGSSFSVSP 102
Query: 391 DSWTP-------EEVIPKRLQEKQKSERETAVRISQEIGN----LMKEIETLVEEKTKES 439
+ + EE+I K E++K + QE+ L+KE E + EK K+S
Sbjct: 103 KAESAVIVANPREEIIVKNKDEEEKLVSNNILHNQQELPTALTKLVKEDEVVSSEKAKDS 162
Query: 440 LDVSRLTRE 448
+ R+ E
Sbjct: 163 FNEKRVAVE 171
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 31.6 bits (70), Expect = 2.8
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 338 NQNLAYYAAMLGEEHTRSIGPRESAKEYRQRS---LLEKELLFFA---YDVFGIPF-VDP 390
++ L + +L E T E++KE +++ L++++L F+ Y G F V P
Sbjct: 249 HEYLGNLSTVLPTEGTLQENVSEASKEVSEKAKTLLIDRDLTEFSELEYSEMGSSFSVSP 308
Query: 391 DSWTP-------EEVIPKRLQEKQKSERETAVRISQEIGN----LMKEIETLVEEKTKES 439
+ + EE+I K E++K + QE+ L+KE E + EK K+S
Sbjct: 309 KAESAVIVANPREEIIVKNKDEEEKLVSNNILHNQQELPTALTKLVKEDEVVSSEKAKDS 368
Query: 440 LDVSRLTRE 448
+ R+ E
Sbjct: 369 FNEKRVAVE 377
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 31.6 bits (70), Expect = 2.8
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 404 QEKQKSERETAVRISQEIGNLMKEIETLVE--------EKTKESLDVSRLTREGGPLLYE 455
+E+Q R A ++EI IE +VE EK K++L++ +++R G L +
Sbjct: 823 KEEQSRLRRIAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPK 882
Query: 456 GISLTMNSKL---LNGSQRVVMDGVISDHECQELQRLTNVAATSG 497
G S L ++G +R + D E + + A G
Sbjct: 883 GFDALQESSLDSGMSGRKRKASISLTDDEVDDEEETIEEEEANEG 927
>gi|83921609 hypothetical protein LOC127254 [Homo sapiens]
Length = 1530
Score = 31.6 bits (70), Expect = 2.8
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 396 EEVIPKRLQEKQKSERETAVRISQEIGNLMKEIETLVEEKTKE 438
E VIPKR + K+ +A +QEI +KE+ T VEE T +
Sbjct: 436 EYVIPKRNEIKENKTSVSAKFSAQEIKTGLKEVVTAVEEMTSK 478
>gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1
[Homo sapiens]
Length = 1045
Score = 30.8 bits (68), Expect = 4.7
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 630 TELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTRGQRCAIALWF-----TLDPRHSE 684
TEL+++ + Q Q ++ F G E+P G ++ RG+ ++ + PR S
Sbjct: 379 TELNSEVLE---QSQQSTSLTFGEGAESPGG-QSCRRGKEPKVSAGEPGSHPSPAPRRSP 434
Query: 685 RDRVQADDLVKMLFSPEEMDLSQEQPLDAQQGPPEPAQESLSGS 728
QAD + EE ++ +++ ++ PP+P+ SL+GS
Sbjct: 435 AGNKQADGAASAP-TEEEEEVVKDRTQQSKPQPPQPSTGSLTGS 477
>gi|63252886 prolyl 4-hydroxylase, alpha I subunit isoform 1
precursor [Homo sapiens]
Length = 534
Score = 30.8 bits (68), Expect = 4.7
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 142 KRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLE 201
K S +YL A ++ L+KA+ +PEH NL Y++ + KE D
Sbjct: 204 KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM-AKEKDVNKSA 262
Query: 202 TQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEG 248
+ ++ Q+ P + +Y ++ LC G
Sbjct: 263 S--------------DDQSDQKTTPKKKGVAVDYLPERQKYEMLCRG 295
>gi|217272851 prolyl 4-hydroxylase, alpha I subunit isoform 3
precursor [Homo sapiens]
Length = 516
Score = 30.8 bits (68), Expect = 4.7
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 142 KRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLE 201
K S +YL A ++ L+KA+ +PEH NL Y++ + KE D
Sbjct: 204 KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM-AKEKDVNKSA 262
Query: 202 TQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEG 248
+ ++ Q+ P + +Y ++ LC G
Sbjct: 263 S--------------DDQSDQKTTPKKKGVAVDYLPERQKYEMLCRG 295
>gi|217272849 prolyl 4-hydroxylase, alpha I subunit isoform 2
precursor [Homo sapiens]
Length = 534
Score = 30.8 bits (68), Expect = 4.7
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 142 KRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLE 201
K S +YL A ++ L+KA+ +PEH NL Y++ + KE D
Sbjct: 204 KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM-AKEKDVNKSA 262
Query: 202 TQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEG 248
+ ++ Q+ P + +Y ++ LC G
Sbjct: 263 S--------------DDQSDQKTTPKKKGVAVDYLPERQKYEMLCRG 295
>gi|63252888 prolyl 4-hydroxylase, alpha I subunit isoform 2
precursor [Homo sapiens]
Length = 534
Score = 30.8 bits (68), Expect = 4.7
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 142 KRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLE 201
K S +YL A ++ L+KA+ +PEH NL Y++ + KE D
Sbjct: 204 KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM-AKEKDVNKSA 262
Query: 202 TQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEG 248
+ ++ Q+ P + +Y ++ LC G
Sbjct: 263 S--------------DDQSDQKTTPKKKGVAVDYLPERQKYEMLCRG 295
>gi|11545787 egl nine homolog 3 [Homo sapiens]
Length = 239
Score = 30.4 bits (67), Expect = 6.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 610 RDYSAILYLNGDFDG---GNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666
R + I YLN ++D G + K+ A+V+P R + F S NPH V+ +
Sbjct: 144 RCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQP-SY 202
Query: 667 GQRCAIALWF 676
R A+ +W+
Sbjct: 203 ATRYAMTVWY 212
>gi|9789865 eukaryotic translation initiation factor 4E nuclear
import factor 1 [Homo sapiens]
Length = 985
Score = 30.4 bits (67), Expect = 6.2
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 392 SWTPEEVIPKRLQEKQKSERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREGGP 451
S+TP VI K + K+KS+ E A +G+ ++ + EE S V R+ P
Sbjct: 695 SFTPTSVIRKMYESKEKSKEEPASG-KAALGDSKEDTQKASEENLLSSSSVPSADRDSSP 753
Query: 452 LLYEGISLTMNSKL 465
T NSKL
Sbjct: 754 --------TTNSKL 759
>gi|157671947 hypothetical protein LOC79974 isoform 2 [Homo sapiens]
Length = 783
Score = 30.0 bits (66), Expect = 8.0
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 171 VGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQ-------- 222
VGNP + Q Y+ ++ ++ F + +TQPH E+ + E+PQ
Sbjct: 492 VGNPGSVLTQ----YWSLLNVFEQFQFMNKKTQPHPLEWNSFTEDKNIEKPQVPFDAIEN 547
Query: 223 --EAVPHLEAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQV 275
AVP ++ +E + +E C + + +LE N D I D+Y +V
Sbjct: 548 KKAAVPQIKNENKEIHCSDDE-NTPCHIKQIFT-HPHLELNPDFHPKIKDYYCEV 600
>gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens]
Length = 1026
Score = 30.0 bits (66), Expect = 8.0
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 171 VGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQ-------- 222
VGNP + Q Y+ ++ ++ F + +TQPH E+ + E+PQ
Sbjct: 492 VGNPGSVLTQ----YWSLLNVFEQFQFMNKKTQPHPLEWNSFTEDKNIEKPQVPFDAIEN 547
Query: 223 --EAVPHLEAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQV 275
AVP ++ +E + +E C + + +LE N D I D+Y +V
Sbjct: 548 KKAAVPQIKNENKEIHCSDDE-NTPCHIKQIFT-HPHLELNPDFHPKIKDYYCEV 600
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,557,149
Number of Sequences: 37866
Number of extensions: 1302841
Number of successful extensions: 4396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4342
Number of HSP's gapped (non-prelim): 41
length of query: 736
length of database: 18,247,518
effective HSP length: 110
effective length of query: 626
effective length of database: 14,082,258
effective search space: 8815493508
effective search space used: 8815493508
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.