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Search of human proteins with 18644734
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18644734 beta catenin-like 1 [Homo sapiens]
(563 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18644734 beta catenin-like 1 [Homo sapiens] 1108 0.0
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 47 5e-05
gi|148746195 trichohyalin [Homo sapiens] 45 2e-04
gi|156142192 hypothetical protein LOC51306 isoform 3 [Homo sapiens] 44 5e-04
gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens] 44 5e-04
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 43 9e-04
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 40 0.004
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 40 0.006
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 40 0.006
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 40 0.006
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 40 0.006
gi|224922812 tropomyosin 2 (beta) isoform 3 [Homo sapiens] 40 0.007
gi|18426913 drebrin 1 isoform b [Homo sapiens] 40 0.007
gi|18426915 drebrin 1 isoform a [Homo sapiens] 40 0.007
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 39 0.013
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 39 0.017
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 39 0.017
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 39 0.017
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 39 0.017
gi|221219020 NYD-SP11 protein [Homo sapiens] 38 0.022
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens] 38 0.022
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 38 0.022
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 38 0.022
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 38 0.028
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 38 0.028
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 38 0.028
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.028
>gi|18644734 beta catenin-like 1 [Homo sapiens]
Length = 563
Score = 1108 bits (2867), Expect = 0.0
Identities = 563/563 (100%), Positives = 563/563 (100%)
Query: 1 MDVGELLSYQPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLL 60
MDVGELLSYQPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLL
Sbjct: 1 MDVGELLSYQPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLL 60
Query: 61 QIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDI 120
QIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDI
Sbjct: 61 QIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDI 120
Query: 121 IQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEG 180
IQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEG
Sbjct: 121 IQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEG 180
Query: 181 AEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQG 240
AEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQG
Sbjct: 181 AEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQG 240
Query: 241 LLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHN 300
LLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHN
Sbjct: 241 LLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHN 300
Query: 301 PSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKVLDHA 360
PSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKVLDHA
Sbjct: 301 PSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKVLDHA 360
Query: 361 MIGPEGTDNCHKFVDILGLRTIFPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLRG 420
MIGPEGTDNCHKFVDILGLRTIFPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLRG
Sbjct: 361 MIGPEGTDNCHKFVDILGLRTIFPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLRG 420
Query: 421 QQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDMVRRGEIIDNDTEEE 480
QQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDMVRRGEIIDNDTEEE
Sbjct: 421 QQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDMVRRGEIIDNDTEEE 480
Query: 481 FYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENI 540
FYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENI
Sbjct: 481 FYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENI 540
Query: 541 GDGRSPEFRENEQKRILGLLENF 563
GDGRSPEFRENEQKRILGLLENF
Sbjct: 541 GDGRSPEFRENEQKRILGLLENF 563
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 47.0 bits (110), Expect = 5e-05
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 31/153 (20%)
Query: 10 QPNRGTKRPRDD---EEEEQKMRRK-QTGTRERGRY--REEEM---------TVVEEADD 54
Q N+ RPR E+E Q +R + Q +E G+ REEE+ +EEA +
Sbjct: 277 QINKMEARPRRQSMKEKEHQVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGE 336
Query: 55 DKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
++++ + I+ D E+E+EEEE E VK T + S K Q+ PE+ M
Sbjct: 337 EEEKEIAIVHSDAEKEQEEEEQKQEMEVKMEEETEVRESEKQQD------SQPEEVM--- 387
Query: 115 LDLNDIIQEM-HVVATMPDLYHLLVELNAVQSL 146
D+ ++++ + HV+A ++E N V+S+
Sbjct: 388 -DVLEMVENVKHVIADQE-----VMETNRVESV 414
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 13 RGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEE 72
R +R R EEEQ R +Q + R R +EE ++ E ++K+R Q DR EEE+
Sbjct: 1285 RWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRR-RQETDRKFREEEQ 1343
Query: 73 EEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
+ +E +++ ++R K +E ++ + KF+E E
Sbjct: 1344 LLQEREEQPLRR-----QERDRKFREEELRHQEQGRKFLEEE 1380
Score = 37.4 bits (85), Expect = 0.037
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 5 ELLSYQPNRGTKRPRDDEEE---------EQKMRRKQTGTRERGRYREEEMTVVEEADDD 55
+L Q R +R + EEE EQ++RR+Q RE+ REEE + +E +
Sbjct: 506 QLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQ 565
Query: 56 K------KRLLQIIDRDGEEEE-----EEEEPLDESSVKKMILTFEKRSYKNQELRIKFP 104
+ +R Q++ R+ E + E+EE L++ ++ + E+ + Q L+ + P
Sbjct: 566 RLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEP 625
Query: 105 DNPEK 109
+ +
Sbjct: 626 EEERR 630
Score = 37.0 bits (84), Expect = 0.048
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 16 KRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEE 75
+R R EEEQ++RR++ RER ++ EEE + +E + Q++ +E EE+
Sbjct: 1427 ERDRKFREEEQQVRRQE---RER-KFLEEEQQLRQERHRKFREEEQLL------QEREEQ 1476
Query: 76 PLDESSVKKMILTFEK--------RSYKNQELRIKFPDNPEKFMESELDLN 118
L + L E+ R ++ QELR + P+ KF+E E L+
Sbjct: 1477 QLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPE--RKFLEEEQQLH 1525
Score = 36.6 bits (83), Expect = 0.063
Identities = 27/111 (24%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 13 RGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDG----E 68
R ++ + E EQ+++R+Q R++ REEE + ++RL Q + R+ E
Sbjct: 552 REEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLE 611
Query: 69 EEEEEEEPL-----DESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
+EE E+ L +E ++++ + E+ + Q+LR + + E+ ++ E
Sbjct: 612 QEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKRE 662
Score = 36.6 bits (83), Expect = 0.063
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDE 79
+ EEQ+ RR+Q RE+ RE+ + + +++++RL Q + R+ EEE E+E +E
Sbjct: 635 KSEEQEERRQQQLRREQQERREQRL----KREEEEERLEQRLKREHEEERREQELAEE 688
Score = 36.6 bits (83), Expect = 0.063
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 19 RDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLD 78
R++ E+ ++ R++ E +EEE + EE + +++ L+ R+ EE ++EEE L
Sbjct: 1095 REEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLL 1154
Query: 79 ESSVKKMILTFEKRSYKNQE 98
+K +R Y+ +E
Sbjct: 1155 REEPEKRRRQELERQYREEE 1174
Score = 36.6 bits (83), Expect = 0.063
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
Q R + R EEEQ++ R+Q R+R +EE+ +E +++ DRD +
Sbjct: 1506 QELRSQEPERKFLEEEQQLHRQQ---RQRKFLQEEQQLRRQERGQQRRQ-----DRD-RK 1556
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDL 117
EEE+ E +++ R ++ +E +++ + KFME E L
Sbjct: 1557 FREEEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQL 1604
Score = 36.2 bits (82), Expect = 0.082
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 17 RPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDK--KRLLQIIDRDGEEEEEEE 74
R R EEEQ++ R++ R+R ++REEE V + + K + Q+ + EEE
Sbjct: 1412 RDRKFREEEQQLSRQE---RDR-KFREEEQQVRRQERERKFLEEEQQLRQERHRKFREEE 1467
Query: 75 EPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESEL 115
+ L E +++ R + +E +++ + KF E EL
Sbjct: 1468 QLLQEREEQQLHRQERDRKFLEEEQQLRRQERDRKFREQEL 1508
Score = 36.2 bits (82), Expect = 0.082
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDD---KKRLLQIIDRD 66
Q R +R R +EEQ++RR++ ER ++REEE E + ++R +I++ +
Sbjct: 1698 QQLRRQERERKFLQEEQQLRRQEL---ER-KFREEEQLRQETEQEQLRRQERYRKILEEE 1753
Query: 67 GEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
E EE+ L + E+ + +E +++ ++ KF E E
Sbjct: 1754 QLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFREEE 1801
Score = 35.8 bits (81), Expect = 0.11
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 16 KRPRDDEEEEQKMRRKQTGTRERG----RYREEEMTVVEEADDDKKRLLQIIDRDGEEEE 71
+R R EEE ++RR++ + R ++REEE + E + +R +RD + E
Sbjct: 1640 ERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQLRRQ----ERDRKFRE 1695
Query: 72 EEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
EE++ + +K + E++ + QEL KF + + E+E
Sbjct: 1696 EEQQLRRQERERKFLQ--EEQQLRRQELERKFREEEQLRQETE 1736
Score = 35.8 bits (81), Expect = 0.11
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
Q R +R R EEEQ++RR++ RER +EE+ +E + + Q+
Sbjct: 1682 QQLRRQERDRKFREEEQQLRRQE---RERKFLQEEQQLRRQELERKFREEEQL------R 1732
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
+E E+E L + IL E+ + +E +++ + KF E E
Sbjct: 1733 QETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEE 1777
Score = 35.0 bits (79), Expect = 0.18
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 19 RDDEEEEQKMRRKQTGTRERGR-YREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPL 77
R+DE+ Q+ +Q +ER R + EEE + + + + R DRD + EEE+ L
Sbjct: 1622 REDEQLLQEREEQQLHRQERDRKFLEEEPQLRRQEREQQLRH----DRD-RKFREEEQLL 1676
Query: 78 DESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDL 117
E +++ R ++ +E +++ + KF++ E L
Sbjct: 1677 QEGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQL 1716
Score = 34.7 bits (78), Expect = 0.24
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 19 RDDEEEEQKMRRKQTGTRERGR-YREEEMTVVEE----ADDDKKRLLQIIDR----DGEE 69
+++EEE Q+ R++ +E+ R YREEE EE ++ +KR Q +R D +
Sbjct: 907 QEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKL 966
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQELR 100
+++EE+ L E K+ EK+ + +EL+
Sbjct: 967 QQKEEQLLGEEPEKRRRQEREKKYREEEELQ 997
Score = 34.7 bits (78), Expect = 0.24
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 19/115 (16%)
Query: 5 ELLSYQPNRGTKRPRD---------DEEEEQKMRRKQTGTRERG---RYREEEMTVVEEA 52
+LL +P + ++ R+ +EEEQ +R ++ R + +YREEE EE
Sbjct: 1092 QLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEE 1151
Query: 53 ----DDDKKRLLQIIDRDGEEE---EEEEEPLDESSVKKMILTFEKRSYKNQELR 100
++ +KR Q ++R EE ++EEE L +K E++ + +EL+
Sbjct: 1152 QLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYREEEELQ 1206
Score = 34.3 bits (77), Expect = 0.31
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 16 KRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEE----- 70
++ ++ E+Q+ RR+Q RE+ R E+ E+ ++R Q + R+ EEE
Sbjct: 308 RKQEEERREQQEERREQQERREQQEERREQQLRREQ----EERREQQLRREQEEERREQQ 363
Query: 71 ---EEEEEPLDESSVKKMILTFEKRSYKNQELR 100
E+EEE ++ ++ L E++ + Q+LR
Sbjct: 364 LRREQEEERREQQLRREQQLRREQQLRREQQLR 396
Score = 34.3 bits (77), Expect = 0.31
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 20 DDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDE 79
++E EQ+ RR+Q RE+ RE+ + EE + ++RL E+EE E+ L
Sbjct: 493 EEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKR 552
Query: 80 SSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
K++ ++ + Q L+ + + ++ ++ E
Sbjct: 553 EEEKRL-----EQERREQRLKREQEERRDQLLKRE 582
Score = 34.3 bits (77), Expect = 0.31
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 16 KRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEE--- 72
+R E EQ++RR+Q RE+ R+EE EE + R Q + R+ EE E
Sbjct: 495 ERREQQERREQQLRREQEERREQRLKRQEE----EERLQQRLRSEQQLRREQEERREQLL 550
Query: 73 --EEEPLDESSVKKMILTFEKRSYKNQELR 100
EEE E ++ L E+ ++Q L+
Sbjct: 551 KREEEKRLEQERREQRLKREQEERRDQLLK 580
Score = 34.3 bits (77), Expect = 0.31
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 19 RDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLD 78
R++E +Q+++R+Q E+ REE VE + +++R ++ + EEE ++
Sbjct: 581 REEERRQQRLKREQEERLEQRLKREE----VERLEQEERREQRLKREEPEEERRQQLLKS 636
Query: 79 ESSVKKMILTFEKRSYKNQELRIKFPDNPEK 109
E ++ + + +E R+K + E+
Sbjct: 637 EEQEERRQQQLRREQQERREQRLKREEEEER 667
Score = 34.3 bits (77), Expect = 0.31
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 24 EEQKMRRKQTGTRERGRYREEEMTVVEEA----DDDKKRLLQIIDRDGEEEEE----EEE 75
EE++ RR+Q R+ YR+EE EE ++ +KR Q +R EEEE EE+
Sbjct: 1066 EERETRRRQELERQ---YRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQ 1122
Query: 76 PLDESSVKKMILTFEKRSYKNQELRIK----FPDNPEKFMESELD 116
L E K+ E++ + +E++ + + PEK EL+
Sbjct: 1123 LLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELE 1167
Score = 33.9 bits (76), Expect = 0.41
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 23 EEEQKMRRKQTGTRERGRY------REEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEP 76
+EEQ RR+ R +GR RE + V +E ++ + R + + R EE+ +EEEP
Sbjct: 206 DEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEP 265
Query: 77 LDESSVKKMILTFEKRSYKNQELR 100
+ +++ + R + QELR
Sbjct: 266 QRQRELQEE--EEQLRKLERQELR 287
Score = 33.9 bits (76), Expect = 0.41
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 16 KRPRDDEEE-------EQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGE 68
+R R +EE+ EQ++RRKQ ER +EE E + ++R Q + R+ E
Sbjct: 287 RRERQEEEQQQQRLRREQQLRRKQ--EEERREQQEERREQQERREQQEERREQQLRREQE 344
Query: 69 EEEEEE--EPLDESSVKKMILTFEKRSYKNQELR 100
E E++ +E ++ + ++ + Q+LR
Sbjct: 345 ERREQQLRREQEEERREQQLRREQEEERREQQLR 378
Score = 33.5 bits (75), Expect = 0.53
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 16 KRPRDDEEEEQKM---RRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEE- 71
+R +++E EQK RR+Q RE+ R+ E +++R Q + RD EEE
Sbjct: 426 RREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERR 485
Query: 72 ------EEEEPLDESSVKKMILTFEKRSYKNQELR 100
EEEE ++ ++ L E+ + Q L+
Sbjct: 486 ERWLKLEEEERREQQERREQQLRREQEERREQRLK 520
Score = 33.5 bits (75), Expect = 0.53
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 20 DDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEE-----EEEE 74
+ +E +++ R++ R+R + EEE EE + K+R DR +EE EE E
Sbjct: 1273 EQQERDREQERRRWQQRDR-HFPEEEQLEREEQKEAKRR-----DRKSQEEKQLLREERE 1326
Query: 75 EPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESEL 115
E + E+ + +E ++ + KF E EL
Sbjct: 1327 EKRRRQETDRKFREEEQLLQEREEQPLRRQERDRKFREEEL 1367
Score = 33.1 bits (74), Expect = 0.70
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 16 KRPRDDEEEEQKMR--RKQTGTRERGR-YREEEMTVVEE----ADDDKKRLLQIIDR--- 65
K+ +EEEQ +R R++ +ER R YREEE EE ++ + R Q ++R
Sbjct: 1022 KKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYR 1081
Query: 66 -DGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELR 100
+ E ++EEE+ L E K+ E++ + +EL+
Sbjct: 1082 KEEELQQEEEQLLREEPEKRRRQERERQCREEEELQ 1117
Score = 32.7 bits (73), Expect = 0.91
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 16 KRPRDD----EEEEQKMRRKQTGTR-ERGRYREEEMTVVEEADDDKKRLLQI----IDRD 66
+R R D EEEE++ R+++T R E + +EEE E +++++L ++ + R+
Sbjct: 230 RRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRE 289
Query: 67 GEEEEEEEEPL 77
+EEE++++ L
Sbjct: 290 RQEEEQQQQRL 300
Score = 32.7 bits (73), Expect = 0.91
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 19 RDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEP-L 77
R++ E+ ++ R++ +++ ++EE + EE + +++ + R+ EE ++EEE L
Sbjct: 945 REEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLL 1004
Query: 78 DESSVKKMILTFEKRSYKNQELR 100
E K+ +E++ K EL+
Sbjct: 1005 REEREKRRRQEWERQYRKKDELQ 1027
Score = 32.7 bits (73), Expect = 0.91
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 20 DDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDE 79
++ E+ ++ R++ E +EEE + EE + +++ + R +E ++EEE L
Sbjct: 976 EEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLR 1035
Query: 80 SSVKKMILTFEKRSYKNQE 98
+K L +R Y+ +E
Sbjct: 1036 EEREKRRLQERERQYREEE 1054
Score = 32.3 bits (72), Expect = 1.2
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 23 EEEQKMRRKQTGTRERGRYREEEMTVVEEA----DDDKKRLLQIIDRD----GEEEEEEE 74
EE +K RR++ RE+ +YREEE EE ++ +KR Q +R E ++EEE
Sbjct: 976 EEPEKRRRQE---REK-KYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEE 1031
Query: 75 EPLDESSVKKMILTFEKRSYKNQELR 100
+ L E K+ + E++ + +EL+
Sbjct: 1032 QLLREEREKRRLQERERQYREEEELQ 1057
Score = 32.0 bits (71), Expect = 1.6
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 16 KRPRDDEEEEQKMRR--KQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEE 73
+R R+ +EEE+++R+ +Q RER +++ + E +K+ + ++ E E++
Sbjct: 266 QRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQ 325
Query: 74 EEPLDESSVKKMILTFEKRSYKNQELR 100
E + ++ L E+ + Q+LR
Sbjct: 326 ERREQQEERREQQLRREQEERREQQLR 352
Score = 31.6 bits (70), Expect = 2.0
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 28/129 (21%)
Query: 5 ELLSYQPNRGTKRPRD---------DEEEEQKMRRKQTGTR----ERGRYREEEMTVVEE 51
+LL +P + ++ R+ +EEEQ +R ++ R ER +++E+ EE
Sbjct: 972 QLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEE 1031
Query: 52 A---DDDKKRLLQIIDRDGEEE---EEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPD 105
++ +KR LQ +R EE ++EEE L L E+ + + QEL ++
Sbjct: 1032 QLLREEREKRRLQERERQYREEEELQQEEEQL---------LGEERETRRRQELERQYRK 1082
Query: 106 NPEKFMESE 114
E E E
Sbjct: 1083 EEELQQEEE 1091
Score = 31.2 bits (69), Expect = 2.6
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 4 GELLSYQPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMT-----VVEEADDD--- 55
GE S + R +R R +EE +R++ RE R EE++ EE D+
Sbjct: 151 GEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQL 210
Query: 56 KKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESEL 115
++R L + R G EE++++ ++ E++ ++ +E ++ EK E E
Sbjct: 211 RRRELLELRRKGREEKQQQR---RERQDRVFQEEEEKEWRKRETVLR--KEEEKLQEEEP 265
Query: 116 DLNDIIQE 123
+QE
Sbjct: 266 QRQRELQE 273
Score = 30.0 bits (66), Expect = 5.9
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 16 KRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKK-------------RLLQI 62
+R +++E EQ++RR+Q RE+ RE+++ ++ +++ R Q
Sbjct: 365 RREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQ 424
Query: 63 IDRDGEEEEEEEEPLDESSVKKMILTFEKR 92
+ R+ EEE E++ E +++ E+R
Sbjct: 425 LRREQEEERHEQKHEQERREQRLKREQEER 454
Score = 30.0 bits (66), Expect = 5.9
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 25 EQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE------EEEEEEPLD 78
EQ++RR+Q RE+ RE+E E+ + ++R Q + R+ EE EEE E +
Sbjct: 410 EQQLRREQQLRREQQLRREQEEERHEQKHEQERR-EQRLKREQEERRDWLKREEETERHE 468
Query: 79 ESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDL 117
+ K+ + ++ + + L+++ + E+ E L
Sbjct: 469 QERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQL 507
Score = 30.0 bits (66), Expect = 5.9
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDESS 81
EEEE++ RR+Q R RE+E+ +EE + ++R ++ +EEE+ L E
Sbjct: 813 EEEEKEQRRRQR------REREKELQFLEEEEQLQRR------ERAQQLQEEEDGLQEDQ 860
Query: 82 VKK 84
++
Sbjct: 861 ERR 863
>gi|156142192 hypothetical protein LOC51306 isoform 3 [Homo sapiens]
Length = 791
Score = 43.5 bits (101), Expect = 5e-04
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 66 DGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESEL--DLNDIIQE 123
D E+EE E+EP ++ EK+ K L + EK +E L D+ +E
Sbjct: 556 DHEDEENEDEP--------KVIQKEKKPSKEATLELILKRLKEKRIERCLPEDIKVTKEE 607
Query: 124 MHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLH------ES 177
H+V + D Y L+ ++ S+ +LG +T +LQ + + +T H E
Sbjct: 608 RHIVKPLYDRYRLVKQMLTRASITPVLGSPSTK---RRGQMLQPIIEGETAHFFEEIKEE 664
Query: 178 EEGAEVLIDALVDGQVVALLVQ-NLERLDESVKEEADGVHNTLAIVENMAEFRPEM 232
EE L L D A+ VQ +LE + V+E + + L + + A PE+
Sbjct: 665 EEDGVNLSSELGDMLKTAVQVQSSLENSESDVEENQEKLALDLRLSSSRAASMPEL 720
>gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens]
Length = 887
Score = 43.5 bits (101), Expect = 5e-04
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 66 DGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESEL--DLNDIIQE 123
D E+EE E+EP ++ EK+ K L + EK +E L D+ +E
Sbjct: 652 DHEDEENEDEP--------KVIQKEKKPSKEATLELILKRLKEKRIERCLPEDIKVTKEE 703
Query: 124 MHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLH------ES 177
H+V + D Y L+ ++ S+ +LG +T +LQ + + +T H E
Sbjct: 704 RHIVKPLYDRYRLVKQMLTRASITPVLGSPSTK---RRGQMLQPIIEGETAHFFEEIKEE 760
Query: 178 EEGAEVLIDALVDGQVVALLVQ-NLERLDESVKEEADGVHNTLAIVENMAEFRPEM 232
EE L L D A+ VQ +LE + V+E + + L + + A PE+
Sbjct: 761 EEDGVNLSSELGDMLKTAVQVQSSLENSESDVEENQEKLALDLRLSSSRAASMPEL 816
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 42.7 bits (99), Expect = 9e-04
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 8 SYQPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDG 67
S + +R +R R+ E E ++ R ++ RER R RE E E + DKKR DR+
Sbjct: 384 SREKSRDRERERERERERERERERE---REREREREREREREREREKDKKR-----DREE 435
Query: 68 EEEEEEEEPLDESSVKKMILTFEKRSYKNQELR 100
+EE+ E E +++ +++R KN E+R
Sbjct: 436 DEEDAYERRKLERKLREKEAAYQER-LKNWEIR 467
Score = 37.4 bits (85), Expect = 0.037
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 KRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKR-LLQIIDRDGEEEEEEE 74
+R R+ E E ++ RR++ RER R RE+E E + D+ R + DRD + E + +
Sbjct: 309 RRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRD 368
Query: 75 EPLDESS 81
+ SS
Sbjct: 369 RDRERSS 375
Score = 33.9 bits (76), Expect = 0.41
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 12 NRGTKRPRDDEEEEQKMRRK-QTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEE 70
+R +R RD + E R K ++ +RE+ R RE E E + +++R +R+ E E
Sbjct: 360 DRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERER-----ERERERE 414
Query: 71 EEEEEPLD---ESSVKKMILTFEKRSYKNQELRIKFPDNPEKFME 112
E E + E K+ E+ +Y+ ++L K + + E
Sbjct: 415 REREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQE 459
Score = 29.6 bits (65), Expect = 7.7
Identities = 19/89 (21%), Positives = 38/89 (42%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
+ +G K E E+++ R++ RER R E E + +K + +RD +
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDR 351
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQE 98
+ +E D + E+ S +N++
Sbjct: 352 DRTKERDRDRDRERDRDRDRERSSDRNKD 380
>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 42.0 bits (97), Expect = 0.002
Identities = 101/448 (22%), Positives = 184/448 (41%), Gaps = 58/448 (12%)
Query: 132 DLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHES-----EEGAEVLID 186
+ Y EL+ +Q+ + + V+++ L +I LHES +E +E+ D
Sbjct: 254 ETYQKKKELDKLQTKMSKI---KETVTVSAAVLSDHNLEIARLHESIRYWEQEVSELKKD 310
Query: 187 ALVDGQVVALLVQNLERLDESVKEEADGVHNTLA-IVENMAEFRPEMCTEGAQQGLLQWL 245
+ + N E+LD+ +E + N + +VE + R E
Sbjct: 311 LAILEAKLCFFTDNKEKLDDISNDEKNEFLNKIKQLVETLHAARMEY------------- 357
Query: 246 LKRLKAKMPFDAN--KLYCSEVLAILLQD---NDENRELLGELDGIDVLLQQLSVFKRHN 300
K L+ KM A K+ SE LQ +DEN++ L + + L Q V ++
Sbjct: 358 -KDLREKMKTLARQYKIVLSEEEKAFLQKQKIHDENQKQLTFISQKEYFLSQKRVDIKNM 416
Query: 301 P----STAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKV 356
+ E Q+ + ++ +LS+N ER + + + KK +R +A K+
Sbjct: 417 EEGLITLQELQQATKTVYQQQIK--ILSANLERESQRCVITQWKMACLRKKHARWTA-KI 473
Query: 357 LDHAMIGPEGTDNCH-KFVDILGLRTIFPLFMKS-PRKIKKVGTTEKEHEEHVCSILASL 414
E N + +++L + + +I+K+ T KE E+ + L
Sbjct: 474 KAEIQAITEKIQNAEVRRIELLNETSFRQQEISGFVAQIEKLTTELKEEEKAFVNKEKML 533
Query: 415 LRNLRGQQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDMVRRGEIID 474
++ L + + K T+ + EK + L+E YL +QVA+++ + ++ + II
Sbjct: 534 MKELSKYEE--IFVKETQINKEKEEELVE----YLPQLQVAEQEYKEKRRKLEELSNIIT 587
Query: 475 NDTEEEFYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIK 534
+EE L LF YI +N+ ++Q + Q+ + K H
Sbjct: 588 AQRQEEDLLNN-HIFLFTRDFSRYI------SNMEDVKQELQQLRDQESKKNK--DHF-- 636
Query: 535 EYAENIGDGRSPEFRENEQKRILGLLEN 562
E +N+ +G F N+QK L LLEN
Sbjct: 637 ETLKNLENG----FYINDQKADLLLLEN 660
>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 42.0 bits (97), Expect = 0.002
Identities = 101/448 (22%), Positives = 184/448 (41%), Gaps = 58/448 (12%)
Query: 132 DLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHES-----EEGAEVLID 186
+ Y EL+ +Q+ + + V+++ L +I LHES +E +E+ D
Sbjct: 254 ETYQKKKELDKLQTKMSKI---KETVTVSAAVLSDHNLEIARLHESIRYWEQEVSELKKD 310
Query: 187 ALVDGQVVALLVQNLERLDESVKEEADGVHNTLA-IVENMAEFRPEMCTEGAQQGLLQWL 245
+ + N E+LD+ +E + N + +VE + R E
Sbjct: 311 LAILEAKLCFFTDNKEKLDDISNDEKNEFLNKIKQLVETLHAARMEY------------- 357
Query: 246 LKRLKAKMPFDAN--KLYCSEVLAILLQD---NDENRELLGELDGIDVLLQQLSVFKRHN 300
K L+ KM A K+ SE LQ +DEN++ L + + L Q V ++
Sbjct: 358 -KDLREKMKTLARQYKIVLSEEEKAFLQKQKIHDENQKQLTFISQKEYFLSQKRVDIKNM 416
Query: 301 P----STAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKV 356
+ E Q+ + ++ +LS+N ER + + + KK +R +A K+
Sbjct: 417 EEGLITLQELQQATKTVYQQQIK--ILSANLERESQRCVITQWKMACLRKKHARWTA-KI 473
Query: 357 LDHAMIGPEGTDNCH-KFVDILGLRTIFPLFMKS-PRKIKKVGTTEKEHEEHVCSILASL 414
E N + +++L + + +I+K+ T KE E+ + L
Sbjct: 474 KAEIQAITEKIQNAEVRRIELLNETSFRQQEISGFVAQIEKLTTELKEEEKAFVNKEKML 533
Query: 415 LRNLRGQQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDMVRRGEIID 474
++ L + + K T+ + EK + L+E YL +QVA+++ + ++ + II
Sbjct: 534 MKELSKYEE--IFVKETQINKEKEEELVE----YLPQLQVAEQEYKEKRRKLEELSNIIT 587
Query: 475 NDTEEEFYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIK 534
+EE L LF YI +N+ ++Q + Q+ + K H
Sbjct: 588 AQRQEEDLLNN-HIFLFTRDFSRYI------SNMEDVKQELQQLRDQESKKNK--DHF-- 636
Query: 535 EYAENIGDGRSPEFRENEQKRILGLLEN 562
E +N+ +G F N+QK L LLEN
Sbjct: 637 ETLKNLENG----FYINDQKADLLLLEN 660
>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 42.0 bits (97), Expect = 0.002
Identities = 101/448 (22%), Positives = 184/448 (41%), Gaps = 58/448 (12%)
Query: 132 DLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHES-----EEGAEVLID 186
+ Y EL+ +Q+ + + V+++ L +I LHES +E +E+ D
Sbjct: 254 ETYQKKKELDKLQTKMSKI---KETVTVSAAVLSDHNLEIARLHESIRYWEQEVSELKKD 310
Query: 187 ALVDGQVVALLVQNLERLDESVKEEADGVHNTLA-IVENMAEFRPEMCTEGAQQGLLQWL 245
+ + N E+LD+ +E + N + +VE + R E
Sbjct: 311 LAILEAKLCFFTDNKEKLDDISNDEKNEFLNKIKQLVETLHAARMEY------------- 357
Query: 246 LKRLKAKMPFDAN--KLYCSEVLAILLQD---NDENRELLGELDGIDVLLQQLSVFKRHN 300
K L+ KM A K+ SE LQ +DEN++ L + + L Q V ++
Sbjct: 358 -KDLREKMKTLARQYKIVLSEEEKAFLQKQKIHDENQKQLTFISQKEYFLSQKRVDIKNM 416
Query: 301 P----STAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKV 356
+ E Q+ + ++ +LS+N ER + + + KK +R +A K+
Sbjct: 417 EEGLITLQELQQATKTVYQQQIK--ILSANLERESQRCVITQWKMACLRKKHARWTA-KI 473
Query: 357 LDHAMIGPEGTDNCH-KFVDILGLRTIFPLFMKS-PRKIKKVGTTEKEHEEHVCSILASL 414
E N + +++L + + +I+K+ T KE E+ + L
Sbjct: 474 KAEIQAITEKIQNAEVRRIELLNETSFRQQEISGFVAQIEKLTTELKEEEKAFVNKEKML 533
Query: 415 LRNLRGQQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDMVRRGEIID 474
++ L + + K T+ + EK + L+E YL +QVA+++ + ++ + II
Sbjct: 534 MKELSKYEE--IFVKETQINKEKEEELVE----YLPQLQVAEQEYKEKRRKLEELSNIIT 587
Query: 475 NDTEEEFYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIK 534
+EE L LF YI +N+ ++Q + Q+ + K H
Sbjct: 588 AQRQEEDLLNN-HIFLFTRDFSRYI------SNMEDVKQELQQLRDQESKKNK--DHF-- 636
Query: 535 EYAENIGDGRSPEFRENEQKRILGLLEN 562
E +N+ +G F N+QK L LLEN
Sbjct: 637 ETLKNLENG----FYINDQKADLLLLEN 660
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 40.4 bits (93), Expect = 0.004
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 38/251 (15%)
Query: 6 LLSYQPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKR--LLQII 63
L SY+ +R + ++EE K + +R + E E+ D +KKR L +I+
Sbjct: 297 LASYRSKATKERDKLLKQEEMKSLAFEKAKLKREKADALEAKKKEKEDKEKKREELKKIV 356
Query: 64 DRDGEEEEEEEEPLD-ESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQ 122
+ + +++EE+E L E ++ L EKR Y +K P + ME + DL ++ +
Sbjct: 357 EEERLKKKEEKERLKVEREKEREKLREEKRKYVEY---LKQWSKPREDMECD-DLKELPE 412
Query: 123 EMHVVATMP-----DLYHLLVELNAVQSLLGLLGHDNTDVSIAVVD-------------- 163
V +P D +L LNA L L V++ V++
Sbjct: 413 PTPVKTRLPPEIFGDALMVLEFLNAFGELFDLQDEFPDGVTLEVLEEALVGNDSEGPLCE 472
Query: 164 -LLQELTDI-DTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAI 221
L LT I + E EE EV + L D + + L E++ E+AD + L+
Sbjct: 473 LLFFFLTAIFQAIAEEEE--EVAKEQLTDA--------DTKDLTEALDEDADPTKSALSA 522
Query: 222 VENMAEFRPEM 232
V ++A P++
Sbjct: 523 VASLAAAWPQL 533
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 40.0 bits (92), Expect = 0.006
Identities = 95/388 (24%), Positives = 163/388 (42%), Gaps = 67/388 (17%)
Query: 12 NRGTKRPRDDEEEEQKMRRK------QTGTRERGRY-REEEMTVVEEADDDKKR-----L 59
N+ K+ RD EE + ++ + T T++ R RE+E+TV+++A D++ R +
Sbjct: 1135 NKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQV 1194
Query: 60 LQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQ------ELRIKFPDNPEKFMES 113
++ + + EE E L++ K L K++ + + ELR+ ++
Sbjct: 1195 QEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLAGELRV-LGQAKQEVEHK 1253
Query: 114 ELDLNDIIQEM--------HVVATMPDLYHLLVELNAVQSLLGLLGH----------DNT 155
+ L +QE+ A + D H L N V+S+ G+L D
Sbjct: 1254 KKKLEAQVQELQSKCSDGERARAELNDKVHKL--QNEVESVTGMLNEAEGKAIKLAKDVA 1311
Query: 156 DVSIAVVD---LLQELT----DIDT-LHESEEGAEVLIDALVDGQVVALLVQNLER---- 203
+S + D LLQE T ++ T L + EE L D L D ++ A QNLER
Sbjct: 1312 SLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQL-DEEMEA--KQNLERHIST 1368
Query: 204 ----LDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKMPFDANK 259
L +S K+ D A+ E F+ E+ + L Q ++ A + K
Sbjct: 1369 LNIQLSDSKKKLQDFASTVEALEEGKKRFQKEI------ENLTQQYEEKAAAYDKLEKTK 1422
Query: 260 LYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHNPST-AEEQEMME-NLFDSL 317
+ L L+ D D R+L+ L+ QL +++ S A+E++ E +
Sbjct: 1423 NRLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADERDRAEAEAREKE 1482
Query: 318 CSCLMLSSNRERFLKG-EGLQLMNLMLR 344
L L+ E L+ E L+ N ML+
Sbjct: 1483 TKALSLARALEEALEAKEELERTNKMLK 1510
Score = 34.7 bits (78), Expect = 0.24
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 27/263 (10%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVE----EADDDKKRLLQIIDRDGEEEEEEEEPL 77
EEE Q + T+ER + E E+ +E + ++K L + + + E E EE
Sbjct: 851 EEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMR 910
Query: 78 DESSVKKMIL-----TFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPD 132
+ KK L E R + ++ + +K + LDL + ++E
Sbjct: 911 VRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQ 970
Query: 133 LYHLLVE--LNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDT-LHESEEGAEVLI---- 185
L + E + ++ + ++ N +S L + ++D+ T L E EE A+ L
Sbjct: 971 LEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKN 1030
Query: 186 --DALVDGQVVALLV-----QNLERLDESVKEEADGVHNTLAIVE-NMAEFRPEMCTEGA 237
++++ V L Q LE+L ++ +A H +A ++ +AE + ++ +
Sbjct: 1031 KHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEE 1090
Query: 238 QQGLLQWLLKRLKAKMPFDANKL 260
+ LQ L RL ++ N L
Sbjct: 1091 E---LQAALARLDDEIAQKNNAL 1110
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 40.0 bits (92), Expect = 0.006
Identities = 95/388 (24%), Positives = 163/388 (42%), Gaps = 67/388 (17%)
Query: 12 NRGTKRPRDDEEEEQKMRRK------QTGTRERGRY-REEEMTVVEEADDDKKR-----L 59
N+ K+ RD EE + ++ + T T++ R RE+E+TV+++A D++ R +
Sbjct: 1142 NKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQV 1201
Query: 60 LQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQ------ELRIKFPDNPEKFMES 113
++ + + EE E L++ K L K++ + + ELR+ ++
Sbjct: 1202 QEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLAGELRV-LGQAKQEVEHK 1260
Query: 114 ELDLNDIIQEM--------HVVATMPDLYHLLVELNAVQSLLGLLGH----------DNT 155
+ L +QE+ A + D H L N V+S+ G+L D
Sbjct: 1261 KKKLEAQVQELQSKCSDGERARAELNDKVHKL--QNEVESVTGMLNEAEGKAIKLAKDVA 1318
Query: 156 DVSIAVVD---LLQELT----DIDT-LHESEEGAEVLIDALVDGQVVALLVQNLER---- 203
+S + D LLQE T ++ T L + EE L D L D ++ A QNLER
Sbjct: 1319 SLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQL-DEEMEA--KQNLERHIST 1375
Query: 204 ----LDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKMPFDANK 259
L +S K+ D A+ E F+ E+ + L Q ++ A + K
Sbjct: 1376 LNIQLSDSKKKLQDFASTVEALEEGKKRFQKEI------ENLTQQYEEKAAAYDKLEKTK 1429
Query: 260 LYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHNPST-AEEQEMME-NLFDSL 317
+ L L+ D D R+L+ L+ QL +++ S A+E++ E +
Sbjct: 1430 NRLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADERDRAEAEAREKE 1489
Query: 318 CSCLMLSSNRERFLKG-EGLQLMNLMLR 344
L L+ E L+ E L+ N ML+
Sbjct: 1490 TKALSLARALEEALEAKEELERTNKMLK 1517
Score = 34.7 bits (78), Expect = 0.24
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 27/263 (10%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVE----EADDDKKRLLQIIDRDGEEEEEEEEPL 77
EEE Q + T+ER + E E+ +E + ++K L + + + E E EE
Sbjct: 858 EEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMR 917
Query: 78 DESSVKKMIL-----TFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPD 132
+ KK L E R + ++ + +K + LDL + ++E
Sbjct: 918 VRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQ 977
Query: 133 LYHLLVE--LNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDT-LHESEEGAEVLI---- 185
L + E + ++ + ++ N +S L + ++D+ T L E EE A+ L
Sbjct: 978 LEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKN 1037
Query: 186 --DALVDGQVVALLV-----QNLERLDESVKEEADGVHNTLAIVE-NMAEFRPEMCTEGA 237
++++ V L Q LE+L ++ +A H +A ++ +AE + ++ +
Sbjct: 1038 KHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEE 1097
Query: 238 QQGLLQWLLKRLKAKMPFDANKL 260
+ LQ L RL ++ N L
Sbjct: 1098 E---LQAALARLDDEIAQKNNAL 1117
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 40.0 bits (92), Expect = 0.006
Identities = 95/388 (24%), Positives = 163/388 (42%), Gaps = 67/388 (17%)
Query: 12 NRGTKRPRDDEEEEQKMRRK------QTGTRERGRY-REEEMTVVEEADDDKKR-----L 59
N+ K+ RD EE + ++ + T T++ R RE+E+TV+++A D++ R +
Sbjct: 1142 NKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQV 1201
Query: 60 LQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQ------ELRIKFPDNPEKFMES 113
++ + + EE E L++ K L K++ + + ELR+ ++
Sbjct: 1202 QEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLAGELRV-LGQAKQEVEHK 1260
Query: 114 ELDLNDIIQEM--------HVVATMPDLYHLLVELNAVQSLLGLLGH----------DNT 155
+ L +QE+ A + D H L N V+S+ G+L D
Sbjct: 1261 KKKLEAQVQELQSKCSDGERARAELNDKVHKL--QNEVESVTGMLNEAEGKAIKLAKDVA 1318
Query: 156 DVSIAVVD---LLQELT----DIDT-LHESEEGAEVLIDALVDGQVVALLVQNLER---- 203
+S + D LLQE T ++ T L + EE L D L D ++ A QNLER
Sbjct: 1319 SLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQL-DEEMEA--KQNLERHIST 1375
Query: 204 ----LDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKMPFDANK 259
L +S K+ D A+ E F+ E+ + L Q ++ A + K
Sbjct: 1376 LNIQLSDSKKKLQDFASTVEALEEGKKRFQKEI------ENLTQQYEEKAAAYDKLEKTK 1429
Query: 260 LYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHNPST-AEEQEMME-NLFDSL 317
+ L L+ D D R+L+ L+ QL +++ S A+E++ E +
Sbjct: 1430 NRLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADERDRAEAEAREKE 1489
Query: 318 CSCLMLSSNRERFLKG-EGLQLMNLMLR 344
L L+ E L+ E L+ N ML+
Sbjct: 1490 TKALSLARALEEALEAKEELERTNKMLK 1517
Score = 34.7 bits (78), Expect = 0.24
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 27/263 (10%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVE----EADDDKKRLLQIIDRDGEEEEEEEEPL 77
EEE Q + T+ER + E E+ +E + ++K L + + + E E EE
Sbjct: 858 EEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMR 917
Query: 78 DESSVKKMIL-----TFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPD 132
+ KK L E R + ++ + +K + LDL + ++E
Sbjct: 918 VRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQ 977
Query: 133 LYHLLVE--LNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDT-LHESEEGAEVLI---- 185
L + E + ++ + ++ N +S L + ++D+ T L E EE A+ L
Sbjct: 978 LEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKN 1037
Query: 186 --DALVDGQVVALLV-----QNLERLDESVKEEADGVHNTLAIVE-NMAEFRPEMCTEGA 237
++++ V L Q LE+L ++ +A H +A ++ +AE + ++ +
Sbjct: 1038 KHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEE 1097
Query: 238 QQGLLQWLLKRLKAKMPFDANKL 260
+ LQ L RL ++ N L
Sbjct: 1098 E---LQAALARLDDEIAQKNNAL 1117
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 40.0 bits (92), Expect = 0.006
Identities = 95/388 (24%), Positives = 163/388 (42%), Gaps = 67/388 (17%)
Query: 12 NRGTKRPRDDEEEEQKMRRK------QTGTRERGRY-REEEMTVVEEADDDKKR-----L 59
N+ K+ RD EE + ++ + T T++ R RE+E+TV+++A D++ R +
Sbjct: 1135 NKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQV 1194
Query: 60 LQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQ------ELRIKFPDNPEKFMES 113
++ + + EE E L++ K L K++ + + ELR+ ++
Sbjct: 1195 QEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLAGELRV-LGQAKQEVEHK 1253
Query: 114 ELDLNDIIQEM--------HVVATMPDLYHLLVELNAVQSLLGLLGH----------DNT 155
+ L +QE+ A + D H L N V+S+ G+L D
Sbjct: 1254 KKKLEAQVQELQSKCSDGERARAELNDKVHKL--QNEVESVTGMLNEAEGKAIKLAKDVA 1311
Query: 156 DVSIAVVD---LLQELT----DIDT-LHESEEGAEVLIDALVDGQVVALLVQNLER---- 203
+S + D LLQE T ++ T L + EE L D L D ++ A QNLER
Sbjct: 1312 SLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQL-DEEMEA--KQNLERHIST 1368
Query: 204 ----LDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKMPFDANK 259
L +S K+ D A+ E F+ E+ + L Q ++ A + K
Sbjct: 1369 LNIQLSDSKKKLQDFASTVEALEEGKKRFQKEI------ENLTQQYEEKAAAYDKLEKTK 1422
Query: 260 LYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHNPST-AEEQEMME-NLFDSL 317
+ L L+ D D R+L+ L+ QL +++ S A+E++ E +
Sbjct: 1423 NRLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADERDRAEAEAREKE 1482
Query: 318 CSCLMLSSNRERFLKG-EGLQLMNLMLR 344
L L+ E L+ E L+ N ML+
Sbjct: 1483 TKALSLARALEEALEAKEELERTNKMLK 1510
Score = 34.7 bits (78), Expect = 0.24
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 27/263 (10%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVE----EADDDKKRLLQIIDRDGEEEEEEEEPL 77
EEE Q + T+ER + E E+ +E + ++K L + + + E E EE
Sbjct: 851 EEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMR 910
Query: 78 DESSVKKMIL-----TFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPD 132
+ KK L E R + ++ + +K + LDL + ++E
Sbjct: 911 VRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQ 970
Query: 133 LYHLLVE--LNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDT-LHESEEGAEVLI---- 185
L + E + ++ + ++ N +S L + ++D+ T L E EE A+ L
Sbjct: 971 LEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKN 1030
Query: 186 --DALVDGQVVALLV-----QNLERLDESVKEEADGVHNTLAIVE-NMAEFRPEMCTEGA 237
++++ V L Q LE+L ++ +A H +A ++ +AE + ++ +
Sbjct: 1031 KHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEE 1090
Query: 238 QQGLLQWLLKRLKAKMPFDANKL 260
+ LQ L RL ++ N L
Sbjct: 1091 E---LQAALARLDDEIAQKNNAL 1110
>gi|224922812 tropomyosin 2 (beta) isoform 3 [Homo sapiens]
Length = 231
Score = 39.7 bits (91), Expect = 0.007
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 22/222 (9%)
Query: 1 MDVGELLSYQPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLL 60
+D E + R + EEE+Q +++K GT + E+ + E+A D+ +R +
Sbjct: 19 IDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTED----EVEKYSESEKAADESERGM 74
Query: 61 QIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDI 120
++I+ ++EE+ E L E +K+ E K +E+ K +E EL+ ++
Sbjct: 75 KVIENRAMKDEEKME-LQEMQLKEAKHIAEDSDRKYEEVARKL-----VILEGELERSEE 128
Query: 121 IQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNT--DVSIAVVDLLQE-LTDIDTLHES 177
E+ L A++SL+ +T D + LL+E L + +T E
Sbjct: 129 RAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEEIKLLEEKLKEAETRAEF 188
Query: 178 EEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTL 219
E + ++ +D +LE S KEE +H TL
Sbjct: 189 AERSVAKLEKTID---------DLEETLASAKEENVEIHQTL 221
>gi|18426913 drebrin 1 isoform b [Homo sapiens]
Length = 651
Score = 39.7 bits (91), Expect = 0.007
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 22/103 (21%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVE--------EADDDKKRLLQ--IIDRDGEEEE 71
E+E + R++ RER RYRE E + E EA++ K+RL + I +EEE
Sbjct: 209 EQERMEQERQEQEERER-RYREREQQIEEHRRKQQTLEAEEAKRRLKEQSIFGDHRDEEE 267
Query: 72 EEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
E ES V++ +R PDNP +F + +
Sbjct: 268 ETHMKKSESEVEEAAAIIAQR-----------PDNPREFFKQQ 299
>gi|18426915 drebrin 1 isoform a [Homo sapiens]
Length = 649
Score = 39.7 bits (91), Expect = 0.007
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 22/103 (21%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVE--------EADDDKKRLLQ--IIDRDGEEEE 71
E+E + R++ RER RYRE E + E EA++ K+RL + I +EEE
Sbjct: 207 EQERMEQERQEQEERER-RYREREQQIEEHRRKQQTLEAEEAKRRLKEQSIFGDHRDEEE 265
Query: 72 EEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESE 114
E ES V++ +R PDNP +F + +
Sbjct: 266 ETHMKKSESEVEEAAAIIAQR-----------PDNPREFFKQQ 297
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 38.9 bits (89), Expect = 0.013
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 15 TKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVE-----EADDDKKRLLQIIDRDGEE 69
T+ + EEEE+K +++ +E+ + +E++ E E ++++K+ + + EE
Sbjct: 13 TEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEE 72
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEK 109
EE EEE +E K+ E R K ++ R + + EK
Sbjct: 73 EEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEK 112
Score = 37.7 bits (86), Expect = 0.028
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 15 TKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKK-----RLLQIIDRDGEE 69
T++ ++ EEEE+K +RK+ +E EEE EE ++++K R + R EE
Sbjct: 49 TEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEE 108
Query: 70 EEEEEEPLDESSVKK 84
EEE+++ + KK
Sbjct: 109 EEEKKKKRRRKTKKK 123
Score = 37.4 bits (85), Expect = 0.037
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
+ G ++ + E+ ++K ++K+T E+ + +EEE + KK + + + EE
Sbjct: 23 EEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEE 82
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQELRIK 102
EEE+EE E ++ +R + +E + K
Sbjct: 83 EEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKK 115
Score = 30.8 bits (68), Expect = 3.5
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 14/79 (17%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDESS 81
E+EE++ +RK R+R + +EEE EE ++++++ EEEE+EE
Sbjct: 54 EKEEEEKKRK----RKRKKKKEEEEREEEEEEEEEEK----------EEEEKEEGRRRKK 99
Query: 82 VKKMILTFEKRSYKNQELR 100
KK E+ K + R
Sbjct: 100 KKKRRRKEEEEEKKKKRRR 118
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 38.5 bits (88), Expect = 0.017
Identities = 26/114 (22%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 8 SYQPNRGTKRPRDDEEEEQKM--RRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDR 65
S P R K + D+++E+ R + T +++ + +E++ E+D D K++ + D
Sbjct: 368 SPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDE 427
Query: 66 DGE------EEEEEEEPLDESSVKKMILTFEKRSYKN-QELRIKFPDNPEKFME 112
+ + E++EE++P++ S K + EK + + +E ++ D+ E+ M+
Sbjct: 428 EEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMD 481
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 38.5 bits (88), Expect = 0.017
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 16 KRPRDDEEEEQKMRRKQT-GTRERGRYREEEMTVVEE----------ADDDKKRLLQIID 64
+R R + EE ++MR ++ ER R +EEE EE A ++++R+ +
Sbjct: 305 ERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEK 364
Query: 65 RDGEE------EEEEEEPLDESSVKKMILTFEKRSYKNQELRIK 102
R EE EEEE+ ++E K + E++ + QE +IK
Sbjct: 365 RAAEERQRARAEEEEKAKVEEQKRNKQL---EEKKHAMQETKIK 405
Score = 33.5 bits (75), Expect = 0.53
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 16 KRPRDDEEEEQKMRRKQTGT----RERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEE 71
+R + EE +K+++KQ E + REE V+EE ++++R + DR EEE
Sbjct: 542 RRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE--EEQRRKQEEADRKLREEE 599
Query: 72 EEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDN 106
E+ +E E+R + E R K P++
Sbjct: 600 EKRRLKEE---------IERRRAEAAEKRQKMPED 625
Score = 30.8 bits (68), Expect = 3.5
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 15 TKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVV---------EEADDDKKRLLQIIDR 65
++R ++D E + +++ + RY EE V +A+++KK
Sbjct: 134 SRRMQNDTAENETTEKEEKSESRQERYEIEETETVTKSYQKNDWRDAEENKKE------- 186
Query: 66 DGEEEEEEEEPLDESSV--KKMILTFEKRSYKNQE 98
D E+EEEEEE S+ ++ + E+++ ++QE
Sbjct: 187 DKEKEEEEEEKPKRGSIGENQVEVMVEEKTTESQE 221
Score = 30.8 bits (68), Expect = 3.5
Identities = 21/108 (19%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 21 DEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDES 80
+E ++++ R++ E R ++EE +++K+RL + I+R E E+ + + E
Sbjct: 566 EELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPED 625
Query: 81 SVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVA 128
+ F+ + K L+I + +F+ + + ++ H A
Sbjct: 626 GLSDDKKPFKCFTPKGSSLKI---EERAEFLNKSVQKSSGVKSTHQAA 670
Score = 30.4 bits (67), Expect = 4.5
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDESS 81
EE+ R++ ER R REEE EE K+ + + +EEE+ +E
Sbjct: 298 EEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEE-- 355
Query: 82 VKKMILTFEKRSYKNQE 98
++ I EKR+ + ++
Sbjct: 356 -RQRIKEEEKRAAEERQ 371
Score = 30.4 bits (67), Expect = 4.5
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 16 KRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEAD-----DDKKRLLQIIDRDGEEE 70
+R R EEE ++ R+R R EEE VEE ++KK +Q GE+
Sbjct: 355 ERQRIKEEE-----KRAAEERQRARAEEEEKAKVEEQKRNKQLEEKKHAMQETKIKGEKV 409
Query: 71 EEE-------EEPLDESSVKKMIL--TFEKRSYKNQELRIKFPDNPEKFMESEL 115
E++ E+ E ++ +L E++ K Q R K ++ F + E+
Sbjct: 410 EQKIEGKWVNEKKAQEDKLQTAVLKKQGEEKGTKVQAKREKLQEDKPTFKKEEI 463
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 38.5 bits (88), Expect = 0.017
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
+ R ++ R+ E E +K R K+ +ERG+ ++ + ++ + DK++ DR+ E
Sbjct: 386 EKERVKEKDREKEREREKEREKE---KERGKNKDRDKEREKDREKDKEK-----DRERER 437
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQEL 99
E+E E+ D+ K+ E+ +++E+
Sbjct: 438 EKEHEKDRDKEKEKEQDKEKEREKDRSKEI 467
Score = 35.8 bits (81), Expect = 0.11
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
+ RG + RD E E+ + + K+ ++R R RE+E E D DK++ + D++ E
Sbjct: 408 EKERGKNKDRDKEREKDREKDKE---KDREREREKE----HEKDRDKEKEKEQ-DKEKER 459
Query: 70 EEEEEEPLDESSVKKMILTFEKRSY 94
E++ + +DE K RSY
Sbjct: 460 EKDRSKEIDEKRKKDKKSRTPPRSY 484
Score = 34.7 bits (78), Expect = 0.24
Identities = 21/91 (23%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
+ +R +R R+ E E++K R K ++R + RE++ +E D +++R + ++D ++
Sbjct: 392 EKDREKEREREKEREKEKERGKN---KDRDKEREKDREKDKEKDREREREKE-HEKDRDK 447
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQELR 100
E+E+E+ ++ K +++ K+++ R
Sbjct: 448 EKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 478
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 38.5 bits (88), Expect = 0.017
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
+ R ++ R+ E E +K R K+ +ERG+ ++ + ++ + DK++ DR+ E
Sbjct: 270 EKERVKEKDREKEREREKEREKE---KERGKNKDRDKEREKDREKDKEK-----DRERER 321
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQEL 99
E+E E+ D+ K+ E+ +++E+
Sbjct: 322 EKEHEKDRDKEKEKEQDKEKEREKDRSKEI 351
Score = 35.8 bits (81), Expect = 0.11
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
+ RG + RD E E+ + + K+ ++R R RE+E E D DK++ + D++ E
Sbjct: 292 EKERGKNKDRDKEREKDREKDKE---KDREREREKE----HEKDRDKEKEKEQ-DKEKER 343
Query: 70 EEEEEEPLDESSVKKMILTFEKRSY 94
E++ + +DE K RSY
Sbjct: 344 EKDRSKEIDEKRKKDKKSRTPPRSY 368
Score = 34.7 bits (78), Expect = 0.24
Identities = 21/91 (23%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
+ +R +R R+ E E++K R K ++R + RE++ +E D +++R + ++D ++
Sbjct: 276 EKDREKEREREKEREKEKERGKN---KDRDKEREKDREKDKEKDREREREKE-HEKDRDK 331
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQELR 100
E+E+E+ ++ K +++ K+++ R
Sbjct: 332 EKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 362
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 38.1 bits (87), Expect = 0.022
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 10 QPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDG-- 67
+ G ++ + EEEE+K ++K+ ++EE+ EE ++K+ ++ + +
Sbjct: 2271 EEEEGEEKQVEKEEEEKKKKKKEK--------KKEEVQEKEEVFEEKEEIMSEEETESLS 2322
Query: 68 -EEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIK 102
EEEEEE L+E ++ + +++ +K QE R K
Sbjct: 2323 DEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRK 2358
Score = 35.4 bits (80), Expect = 0.14
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 20 DDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDE 79
D+ E+++ + ++ RE REEE V E ++++K EEEE EE+ +++
Sbjct: 2235 DELEKQESLSSEEEEEREEEEEREEEE--VREEEEERK----------EEEEGEEKQVEK 2282
Query: 80 SSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELD 116
+K EK+ + QE F + E E E +
Sbjct: 2283 EEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETE 2319
Score = 33.5 bits (75), Expect = 0.53
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 23 EEEQKMRRKQT--GTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDES 80
++E+K+ RKQ + R +EE EE+ +K I+D + E EEEE
Sbjct: 2134 KDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIEEEE----- 2188
Query: 81 SVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVEL 140
++ F KR ++ ++ K D P++ S++D ++ E H M LL EL
Sbjct: 2189 -----VIPFLKRRWRKRK-EAKRGDKPKEKFSSQVD--EVESEEHFSEEMES---LLDEL 2237
Query: 141 NAVQSL 146
+SL
Sbjct: 2238 EKQESL 2243
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 16 KRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEE--EEE 73
+R ++E EE+++R ++ +E E+++ EE KK+ + + +EE EE+
Sbjct: 2250 EREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEK 2309
Query: 74 EEPLDESSVKKM 85
EE + E + +
Sbjct: 2310 EEIMSEEETESL 2321
>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
Length = 1012
Score = 38.1 bits (87), Expect = 0.022
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 7 LSYQPNRGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRD 66
LSYQ ++ ++++EE+K+R +Q R R REE + L ++++R+
Sbjct: 861 LSYQHPSVDQKQIEEQKEEEKIREQQVKER---RQREERR---------QSNLQEVLERE 908
Query: 67 GEEEE---EEEEPLDES---SVKKMILTFEKRSYKNQELRIK--FPDNP-EKFM---ESE 114
E E +E + ++ES +KK + + NQE++ K +NP EK+M + E
Sbjct: 909 RRELEKLYQERKMIEESLKIKIKKELEMENELEMSNQEIKDKSAHSENPLEKYMKIIQQE 968
Query: 115 LDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVS 158
D + + L L + V+SL G H+ D S
Sbjct: 969 QDQESADKSSKKMVQEGSLVDTLQSSDKVESLTG-FSHEELDDS 1011
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 38.1 bits (87), Expect = 0.022
Identities = 73/312 (23%), Positives = 121/312 (38%), Gaps = 38/312 (12%)
Query: 40 RYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQEL 99
+YRE+ V+ D +K+LL++ + +E E + L+E ++ N++L
Sbjct: 2535 QYREDLNQVITIKDSQQKQLLEVQLQQNKELENKYAKLEEK--------LKESEEANEDL 2586
Query: 100 RIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELNAVQ--SLLGLLGHDNTDV 157
R F E + DL+ I+ + V + L ++ A+Q LGL H V
Sbjct: 2587 RRSF----NALQEEKQDLSKEIESLKV-----SISQLTRQVTALQEEGTLGLY-HAQLKV 2636
Query: 158 SIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHN 217
V L L S++ L + LV Q A + + +++ +K+E +H+
Sbjct: 2637 KEEEVHRLSAL-----FSSSQKRIAELEEELVCVQKEA--AKKVGEIEDKLKKELKHLHH 2689
Query: 218 TLAIVENMAEFRPEMCTEGAQQ--GLLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDE 275
I+ N E E E A+ + Q LL K A ++ L D
Sbjct: 2690 DAGIMRNETETAEERVAELARDLVEMEQKLLMVTKENKGLTAQIQSFGRSMSSLQNSRDH 2749
Query: 276 NRELLGELD-GIDVLLQQLSVFKRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGE 334
E L EL D L++L+ K EQ ++ D+L S S N
Sbjct: 2750 ANEELDELKRKYDASLKELAQLK--------EQGLLNRERDALLSETAFSMNSTEENSLS 2801
Query: 335 GLQLMNLMLREK 346
L+ +N L K
Sbjct: 2802 HLEKLNQQLLSK 2813
Score = 32.3 bits (72), Expect = 1.2
Identities = 71/365 (19%), Positives = 145/365 (39%), Gaps = 56/365 (15%)
Query: 12 NRGTKRPRDDEEEEQKMRRKQTGTRE--RGRYREEEMTVVEEADDDKKRLLQIIDRDGEE 69
++ + P D E ++ T+E + R E VVE D +++ +Q+ +D E
Sbjct: 23 DQNMRAPLDPELHQESDMEFNNTTQEDVQERLAYAEQLVVELKDIIRQKDVQLQQKD--E 80
Query: 70 EEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMH---- 125
+EE ++ +KK+ L + + LN I+EM
Sbjct: 81 ALQEERKAADNKIKKLKLHAKAKL---------------------TSLNKYIEEMKAQGG 119
Query: 126 -VVATMPDLYHLLVELNAVQSLLGLLGHD--NTDVSIAVVDLLQELTD----IDTLHE-- 176
V+ T P QS L HD +T+ + + + +L + I TL
Sbjct: 120 TVLPTEP------------QSEEQLSKHDKSSTEEEMEIEKIKHKLQEKEELISTLQAQL 167
Query: 177 SEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFRPEMCTEG 236
++ AE + + + ++ Q L+ +E + + T A R +
Sbjct: 168 TQAQAEQPAQSSTEMEEFVMMKQQLQEKEEFISTLQAQLSQTQAEQAAQQVVREKDARFE 227
Query: 237 AQQGLLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVF 296
Q L + L +L + + VL L++++E+ L+G +D+L Q+L+
Sbjct: 228 TQVRLHEDELLQLVTQADVETEMQQKLRVLQRKLEEHEES--LVGRAQVVDLLQQELTAA 285
Query: 297 KRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKV 356
++ N +++ + ME ++L + + + L L+ M L + E+K+S + +
Sbjct: 286 EQRNQILSQQLQQMEAEHNTLRNTVETEREESKIL----LEKMELEVAERKLSFHNLQEE 341
Query: 357 LDHAM 361
+ H +
Sbjct: 342 MHHLL 346
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 38.1 bits (87), Expect = 0.022
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 6 LLSYQPNRGTKRPRDDEEE---EQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQI 62
+L QP+ R R+ E+E E+++ ++Q RE+ R ++ E +E + +K++ Q
Sbjct: 494 ILEKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQ- 552
Query: 63 IDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQ 122
+ + E ++E+E+ L+ K+ L K K EL + EK E +L +++
Sbjct: 553 REMEKERKQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVE 612
Query: 123 E 123
+
Sbjct: 613 K 613
Score = 35.8 bits (81), Expect = 0.11
Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 17 RPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVE---------EADDDKKRLLQI-IDRD 66
R R +EEE + +++ E+ + +E++ ++E E + +K+R + ++++
Sbjct: 463 RKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQPSPEEIREREREKEREREKELEKE 522
Query: 67 GEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEM 124
E+E E+E D ++ EK K +E+ + EK +E + + +Q+M
Sbjct: 523 QEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKM 580
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 37.7 bits (86), Expect = 0.028
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 15 TKRPRDDEEEEQKMRRKQTGTRERG-------RYREEEMTVVEEADDDKKRLL---QIID 64
T ++EEEE++ ++TG+ EEEM+ EE +++ L+ D
Sbjct: 294 TSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFD 353
Query: 65 RDGEEEEEEEEPLDESSVKKMILT 88
RD E EE EE + E + + LT
Sbjct: 354 RDSGESEEAEEEVGEGTPQSSALT 377
Score = 33.5 bits (75), Expect = 0.53
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 19 RDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEE 75
+D + E+K ++ + E G EEE EE +++ + + + EEEEEEEE
Sbjct: 255 QDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEE 311
Score = 30.4 bits (67), Expect = 4.5
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 20 DDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDE 79
++EEEE++ ++ T E EEE EE ++ + ++ EE EEE DE
Sbjct: 279 EEEEEEEEEEEEEGSTSEESEEEEEEEE--EEEEETGSNSEEASEQSAEEVSEEEMSEDE 336
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 37.7 bits (86), Expect = 0.028
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 15 TKRPRDDEEEEQKMRRKQTGTRERG-------RYREEEMTVVEEADDDKKRLL---QIID 64
T ++EEEE++ ++TG+ EEEM+ EE +++ L+ D
Sbjct: 304 TSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFD 363
Query: 65 RDGEEEEEEEEPLDESSVKKMILT 88
RD E EE EE + E + + LT
Sbjct: 364 RDSGESEEAEEEVGEGTPQSSALT 387
Score = 33.5 bits (75), Expect = 0.53
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 19 RDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEE 75
+D + E+K ++ + E G EEE EE +++ + + + EEEEEEEE
Sbjct: 265 QDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEE 321
Score = 30.4 bits (67), Expect = 4.5
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 20 DDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDE 79
++EEEE++ ++ T E EEE EE ++ + ++ EE EEE DE
Sbjct: 289 EEEEEEEEEEEEEGSTSEESEEEEEEEE--EEEEETGSNSEEASEQSAEEVSEEEMSEDE 346
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 37.7 bits (86), Expect = 0.028
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 13 RGTKRPRDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEE 72
R ++ R+++ E+K R ++ R G+ RE+E EE +++ EEEEE
Sbjct: 67 RREEKRREEKRREEKRREEK---RREGKRREKEEEKEEEEEEE------------EEEEE 111
Query: 73 EEEPLDESSVKKMILTFEKRSYKNQELRIKFP 104
EEE +E V + T E R + +E R+ P
Sbjct: 112 EEEEEEEEEVSFSLATRE-RETETEEKRLISP 142
Score = 31.6 bits (70), Expect = 2.0
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 22 EEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDESS 81
+EE +R GT R R EE E+ ++K+R + + E+EEE+E +E
Sbjct: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
Query: 82 VKKMILTFEKRSYKNQELRIKF 103
++ E+ + +E + F
Sbjct: 107 EEE-----EEEEEEEEEEEVSF 123
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 37.7 bits (86), Expect = 0.028
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 15 TKRPRDDEEEEQKMRRKQTGTRERG-------RYREEEMTVVEEADDDKKRLL---QIID 64
T ++EEEE++ ++TG+ EEEM+ EE +++ L+ D
Sbjct: 295 TSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFD 354
Query: 65 RDGEEEEEEEEPLDESSVKKMILT 88
RD E EE EE + E + + LT
Sbjct: 355 RDSGESEEAEEEVGEGTPQSSALT 378
Score = 33.5 bits (75), Expect = 0.53
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 19 RDDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEE 75
+D + E+K ++ + E G EEE EE +++ + + + EEEEEEEE
Sbjct: 256 QDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEE 312
Score = 30.4 bits (67), Expect = 4.5
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 20 DDEEEEQKMRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDE 79
++EEEE++ ++ T E EEE EE ++ + ++ EE EEE DE
Sbjct: 280 EEEEEEEEEEEEEGSTSEESEEEEEEEE--EEEEETGSNSEEASEQSAEEVSEEEMSEDE 337
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,112,489
Number of Sequences: 37866
Number of extensions: 928690
Number of successful extensions: 10827
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 279
Number of HSP's that attempted gapping in prelim test: 7266
Number of HSP's gapped (non-prelim): 2291
length of query: 563
length of database: 18,247,518
effective HSP length: 107
effective length of query: 456
effective length of database: 14,195,856
effective search space: 6473310336
effective search space used: 6473310336
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.