Guide to the Human Genome
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Name: ZNF623 Sequence: fasta or formatted (496aa) NCBI GI: 126722743
Description:

zinc finger protein 623 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [536aa] zinc finger protein 623 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4         12           1
 C cysteine            6.0         30           1
 D aspartate           2.4         12           1
 E glutamate           9.3         46           2
 F phenylalanine       4.4         22           2
 G glycine             8.3         41           1
 H histidine           7.5         37           1
 I isoleucine          5.8         29           2
 K lysine              7.3         36           1
 L leucine             7.1         35           4
 M methionine          0.4          2           1
 N asparagine          3.4         17           2
 P proline             3.0         15           1
 Q glutamine           6.7         33           1
 R arginine            6.9         34           1
 S serine              8.1         40           3
 T threonine           4.8         24           2
 V valine              3.2         16           1
 W tryptophan          0.2          1           1
 Y tyrosine            2.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 623 isoform 2 
ZNF623                1.000   zinc finger protein 623 isoform 1 
ZNF420                0.495   zinc finger protein 420 
ZNF16                 0.473   zinc finger protein 16 
ZNF16                 0.473   zinc finger protein 16 
LOC647678             0.470   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.470   PREDICTED: hypothetical protein XP_002343697 
ZNF135                0.470   zinc finger protein 135 
ZNF345                0.470   zinc finger protein 345 
LOC647678             0.468   PREDICTED: similar to zinc finger protein 347 [Homo...
ZNF23                 0.466   zinc finger protein 23 
ZNF569                0.466   zinc finger protein 569 
ZNF132                0.464   zinc finger protein 132 
ZNF167                0.463   zinc finger protein 167 isoform 1 
ZFP2                  0.461   zinc finger protein 2 homolog 
ZNF484                0.461   zinc finger protein 484 isoform b 
ZNF484                0.461   zinc finger protein 484 isoform a 
LOC100287429          0.458   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.458   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.458   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF184                0.458   zinc finger protein 184 
ZNF84                 0.458   zinc finger protein 84 
ZNF84                 0.458   zinc finger protein 84 
ZNF470                0.457   zinc finger protein 470 
ZNF571                0.456   zinc finger protein 571 
ZNF418                0.456   zinc finger protein 418 
ZNF304                0.454   zinc finger protein 304 
ZNF160                0.454   zinc finger protein 160 
ZNF160                0.454   zinc finger protein 160 
ZNF160                0.454   zinc finger protein 160 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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