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Search of human proteins with 18034692
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18034692 CDW92 antigen [Homo sapiens]
(657 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18034692 CDW92 antigen [Homo sapiens] 1322 0.0
gi|166235173 solute carrier family 44, member 3 isoform 1 [Homo ... 635 0.0
gi|166235171 solute carrier family 44, member 3 isoform 2 [Homo ... 599 e-171
gi|222831612 solute carrier family 44, member 2 isoform 1 [Homo ... 277 2e-74
gi|222831610 solute carrier family 44, member 2 isoform 2 [Homo ... 277 2e-74
gi|194239633 solute carrier family 44, member 5 isoform B [Homo ... 257 2e-68
gi|194239631 solute carrier family 44, member 5 isoform A [Homo ... 251 2e-66
gi|148612887 choline transporter-like protein 4 [Homo sapiens] 250 3e-66
gi|169214831 PREDICTED: zinc finger protein 840 [Homo sapiens] 35 0.17
gi|169215032 PREDICTED: zinc finger protein 840 [Homo sapiens] 35 0.17
gi|169214556 PREDICTED: zinc finger protein 840 [Homo sapiens] 35 0.17
gi|157388921 transmembrane and coiled-coil domains 3 [Homo sapiens] 33 0.83
gi|224809466 anthrax toxin receptor 2 isoform 2 [Homo sapiens] 31 3.2
gi|50513243 anthrax toxin receptor 2 isoform 1 [Homo sapiens] 31 3.2
gi|24475847 influenza virus NS1A binding protein [Homo sapiens] 31 3.2
gi|4506163 presenilin 1 isoform I-467 [Homo sapiens] 31 4.1
gi|195947397 presenilin 1 isoform I-463 [Homo sapiens] 31 4.1
gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens] 31 4.1
gi|22296884 transmembrane protein 185A [Homo sapiens] 30 7.1
>gi|18034692 CDW92 antigen [Homo sapiens]
Length = 657
Score = 1322 bits (3421), Expect = 0.0
Identities = 657/657 (100%), Positives = 657/657 (100%)
Query: 1 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS 60
MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
Sbjct: 1 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS 60
Query: 61 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ 120
GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
Sbjct: 61 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ 120
Query: 121 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN 180
ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
Sbjct: 121 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN 180
Query: 181 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL 240
ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
Sbjct: 181 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL 240
Query: 241 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT 300
VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
Sbjct: 241 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT 300
Query: 301 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG 360
VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
Sbjct: 301 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG 360
Query: 361 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK 420
TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
Sbjct: 361 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK 420
Query: 421 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK 480
RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
Sbjct: 421 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK 480
Query: 481 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML 540
SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
Sbjct: 481 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML 540
Query: 541 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC 600
FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
Sbjct: 541 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC 600
Query: 601 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA 657
FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA
Sbjct: 601 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA 657
>gi|166235173 solute carrier family 44, member 3 isoform 1 [Homo
sapiens]
Length = 653
Score = 635 bits (1638), Expect = 0.0
Identities = 307/625 (49%), Positives = 423/625 (67%), Gaps = 9/625 (1%)
Query: 8 SSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGN 67
S+ +REW+P R CTD WL LF LF G+ FI G+S+ GAA RL+ GYDS+GN
Sbjct: 11 SAEGAPRQREWRPQIYRKCTDTAWLFLFFLFWTGLVFIMGYSVVAGAAGRLLFGYDSFGN 70
Query: 68 ICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQELKTLSD 127
+CG+KN+ +E P SG D T +K+VFF++ CNL++ ++ +ALCV+ CP ++L +L +
Sbjct: 71 MCGKKNSPVEGAPLSGQDMTLKKHVFFMNSCNLEVKGTQLNRMALCVSNCPEEQLDSLEE 130
Query: 128 VQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVNISCYAKF 187
VQ FA +GS LC Y+L YT SPK+ LCP+LPVP S P F+RC P CY+ F
Sbjct: 131 VQFFANTSGSFLCVYSLNSFNYTHSPKADSLCPRLPVPPSKSFPLFNRCVPQTPECYSLF 190
Query: 188 AEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTIL 247
A LI +D LHR++SG+M+ ++ ILGLC+L+L LS+ +M R+I+ +LV I L
Sbjct: 191 ASVLI---NDVDTLHRILSGIMSGRDTILGLCILALALSLAMMFTFRFITTLLVHIFISL 247
Query: 248 VILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFTVILFLIM 307
VILG L GVLWWLY +L +N++ +L +AI +T T +L +++
Sbjct: 248 VILGLLFVCGVLWWLYYDYTND-----LSIELDTERENMKCVLGFAIVSTGITAVLLVLI 302
Query: 308 LVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQ 367
V+RKR+ LT+ LF + K P L+FQP WTF L+ FWV W+ LL LGT G+
Sbjct: 303 FVLRKRIKLTVELFQITNKAISSAPFLLFQPLWTFAILIFFWVLWVAVLLSLGTAGAAQV 362
Query: 368 NEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKRNLPFTP 427
E G VE+K ++YMW YH++GLIW SEFILACQQMT+AGAVVT YF R K + P P
Sbjct: 363 MEGGQVEYKPLSGIRYMWSYHLIGLIWTSEFILACQQMTIAGAVVTCYFNRSKNDPPDHP 422
Query: 428 ILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKEN-ACARCVLKSCICCL 486
IL+S++ L YH GTV KGSF+I++V+IPR+I+MY+ + LK +++ A +R + + C CC
Sbjct: 423 ILSSLSILFFYHQGTVVKGSFLISVVRIPRIIVMYMQNALKEQQHGALSRYLFRCCYCCF 482
Query: 487 WCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVL 546
WCL+K L +LNQNAYT TAIN T+FCTSAKDAF IL +N+ +IN GDF++FLGKVL
Sbjct: 483 WCLDKYLLHLNQNAYTTTAINGTDFCTSAKDAFKILSKNSSHFTSINCFGDFIIFLGKVL 542
Query: 547 IVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTK 606
+VC T G+M NY + + VW +PL++V FA+LVAH FLS++E V+D LFLCFA+D +
Sbjct: 543 VVCFTVFGGLMAFNYNRAFQVWAVPLLLVAFFAYLVAHSFLSVFETVLDALFLCFAVDLE 602
Query: 607 YNDGSPGREFYMDKVLMEFVENSRK 631
NDGS + ++MD+ + FV+ S K
Sbjct: 603 TNDGSSEKPYFMDQEFLSFVKRSNK 627
>gi|166235171 solute carrier family 44, member 3 isoform 2 [Homo
sapiens]
Length = 605
Score = 599 bits (1545), Expect = e-171
Identities = 289/586 (49%), Positives = 401/586 (68%), Gaps = 9/586 (1%)
Query: 47 GFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRK 106
G+S+ GAA RL+ GYDS+GN+CG+KN+ +E P SG D T +K+VFF++ CNL++ +
Sbjct: 2 GYSVVAGAAGRLLFGYDSFGNMCGKKNSPVEGAPLSGQDMTLKKHVFFMNSCNLEVKGTQ 61
Query: 107 IKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPA 166
+ +ALCV+ CP ++L +L +VQ FA +GS LC Y+L YT SPK+ LCP+LPVP
Sbjct: 62 LNRMALCVSNCPEEQLDSLEEVQFFANTSGSFLCVYSLNSFNYTHSPKADSLCPRLPVPP 121
Query: 167 SAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLS 226
S P F+RC P CY+ FA LI +D LHR++SG+M+ ++ ILGLC+L+L LS
Sbjct: 122 SKSFPLFNRCVPQTPECYSLFASVLI---NDVDTLHRILSGIMSGRDTILGLCILALALS 178
Query: 227 MILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNL 286
+ +M R+I+ +LV I LVILG L GVLWWLY +L +N+
Sbjct: 179 LAMMFTFRFITTLLVHIFISLVILGLLFVCGVLWWLYYDYTND-----LSIELDTERENM 233
Query: 287 RALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALV 346
+ +L +AI +T T +L +++ V+RKR+ LT+ LF + K P L+FQP WTF L+
Sbjct: 234 KCVLGFAIVSTGITAVLLVLIFVLRKRIKLTVELFQITNKAISSAPFLLFQPLWTFAILI 293
Query: 347 LFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMT 406
FWV W+ LL LGT G+ E G VE+K ++YMW YH++GLIW SEFILACQQMT
Sbjct: 294 FFWVLWVAVLLSLGTAGAAQVMEGGQVEYKPLSGIRYMWSYHLIGLIWTSEFILACQQMT 353
Query: 407 VAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQ 466
+AGAVVT YF R K + P PIL+S++ L YH GTV KGSF+I++V+IPR+I+MY+ +
Sbjct: 354 IAGAVVTCYFNRSKNDPPDHPILSSLSILFFYHQGTVVKGSFLISVVRIPRIIVMYMQNA 413
Query: 467 LKGKEN-ACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVEN 525
LK +++ A +R + + C CC WCL+K L +LNQNAYT TAIN T+FCTSAKDAF IL +N
Sbjct: 414 LKEQQHGALSRYLFRCCYCCFWCLDKYLLHLNQNAYTTTAINGTDFCTSAKDAFKILSKN 473
Query: 526 ALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHC 585
+ +IN GDF++FLGKVL+VC T G+M NY + + VW +PL++V FA+LVAH
Sbjct: 474 SSHFTSINCFGDFIIFLGKVLVVCFTVFGGLMAFNYNRAFQVWAVPLLLVAFFAYLVAHS 533
Query: 586 FLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRK 631
FLS++E V+D LFLCFA+D + NDGS + ++MD+ + FV+ S K
Sbjct: 534 FLSVFETVLDALFLCFAVDLETNDGSSEKPYFMDQEFLSFVKRSNK 579
>gi|222831612 solute carrier family 44, member 2 isoform 1 [Homo
sapiens]
Length = 706
Score = 277 bits (709), Expect = 2e-74
Identities = 201/697 (28%), Positives = 332/697 (47%), Gaps = 95/697 (13%)
Query: 20 PLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAI 79
P+ +R CTDI + +L +G + + G +++ DS G CGQK TK E
Sbjct: 25 PIYNRGCTDIICCVFLLLAIVGYVAVGIIAWTHGDPRKVIYPTDSRGEFCGQKGTKNENK 84
Query: 80 PNSGMDHTQRKYVFFLDPCN----LDLINRKIKSVALCVAACPRQELKTLSDVQKFAEIN 135
P Y+F+ + L L+ + + +CV CP + L L+
Sbjct: 85 P----------YLFYFNIVKCASPLVLLEFQCPTPQICVEKCPDRYLTYLNARSSRDFEY 134
Query: 136 GSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVNISCYAKFAEALITFV 195
C K ++ CP + +P+ P RC P + T
Sbjct: 135 YKQFCVPGFKNNKGVAEVLQDGDCPAVLIPSK---PLARRCFPAIHAYKGVLMVGNETTY 191
Query: 196 SDNSVLHRLIS----------GVMTSKE---------------IILGLCLLSLVLSMILM 230
D + I+ GV+ +++ II+GL ++++ +S++ +
Sbjct: 192 EDGHGSRKNITDLVEGAKKANGVLEARQLAMRIFEDYTVSWYWIIIGL-VIAMAMSLLFI 250
Query: 231 VIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAED-----N 285
+++R+++ ++VW++ I+VIL G + Y++ R V+ L D +
Sbjct: 251 ILLRFLAGIMVWVMIIMVILVLGYGIFHCYMEYSRLRGEAGSDVSLVDLGFQTDFRVYLH 310
Query: 286 LRAL-LIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFA 344
LR L + I ++ VI+ L+++ +RKR+ + IAL A + ++ + P TFF
Sbjct: 311 LRQTWLAFMIILSILEVIIILLLIFLRKRILIAIALIKEASRAVGYVMCSLLYPLVTFFL 370
Query: 345 LVLFWVYWIMTLLFLGTTGSPVQ---------------NEQGFVEFKIS-----GPLQYM 384
L L YW T +FL T+ V N + F S Q+
Sbjct: 371 LCLCIAYWASTAVFLSTSNEAVYKIFDDSPCPFTAKTCNPETFPSSNESRQCPNARCQFA 430
Query: 385 WW-----YH--VVGL--------IWISEFILACQQMTVAGAVVTYYFT-RDKRNLPFTPI 428
++ YH ++GL W++ F+LA Q+T+AGA +YY+ R +LP P+
Sbjct: 431 FYGGESGYHRALLGLQIFNAFMFFWLANFVLALGQVTLAGAFASYYWALRKPDDLPAFPL 490
Query: 429 LASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLKSCICCLWC 488
++ R +RYH G++A G+ I+ +V+I R+IL Y+ +LK EN A+C++ CC WC
Sbjct: 491 FSAFGRALRYHTGSLAFGALILAIVQIIRVILEYLDQRLKAAENKFAKCLMTCLKCCFWC 550
Query: 489 LEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIV 548
LEK + +LN+NAY AI TNFCTSA++AF +L+ N +RVA ++ V DF+ LGK+LIV
Sbjct: 551 LEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFLLGKLLIV 610
Query: 549 CSTGLAGIMLLNYQ----QDYT-----VWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFL 599
S G+ ++ QD WV P++ V + ++L+AH F S+Y M VD LFL
Sbjct: 611 GSVGILAFFFFTHRIRIVQDTAPPLNYYWV-PILTVIVGSYLIAHGFFSVYGMCVDTLFL 669
Query: 600 CFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEA 636
CF D + NDGS R ++M L + + + K E+
Sbjct: 670 CFLEDLERNDGSAERPYFMSSTLKKLLNKTNKKAAES 706
>gi|222831610 solute carrier family 44, member 2 isoform 2 [Homo
sapiens]
Length = 704
Score = 277 bits (709), Expect = 2e-74
Identities = 201/697 (28%), Positives = 332/697 (47%), Gaps = 95/697 (13%)
Query: 20 PLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAI 79
P+ +R CTDI + +L +G + + G +++ DS G CGQK TK E
Sbjct: 23 PIYNRGCTDIICCVFLLLAIVGYVAVGIIAWTHGDPRKVIYPTDSRGEFCGQKGTKNENK 82
Query: 80 PNSGMDHTQRKYVFFLDPCN----LDLINRKIKSVALCVAACPRQELKTLSDVQKFAEIN 135
P Y+F+ + L L+ + + +CV CP + L L+
Sbjct: 83 P----------YLFYFNIVKCASPLVLLEFQCPTPQICVEKCPDRYLTYLNARSSRDFEY 132
Query: 136 GSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVNISCYAKFAEALITFV 195
C K ++ CP + +P+ P RC P + T
Sbjct: 133 YKQFCVPGFKNNKGVAEVLQDGDCPAVLIPSK---PLARRCFPAIHAYKGVLMVGNETTY 189
Query: 196 SDNSVLHRLIS----------GVMTSKE---------------IILGLCLLSLVLSMILM 230
D + I+ GV+ +++ II+GL ++++ +S++ +
Sbjct: 190 EDGHGSRKNITDLVEGAKKANGVLEARQLAMRIFEDYTVSWYWIIIGL-VIAMAMSLLFI 248
Query: 231 VIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAED-----N 285
+++R+++ ++VW++ I+VIL G + Y++ R V+ L D +
Sbjct: 249 ILLRFLAGIMVWVMIIMVILVLGYGIFHCYMEYSRLRGEAGSDVSLVDLGFQTDFRVYLH 308
Query: 286 LRAL-LIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFA 344
LR L + I ++ VI+ L+++ +RKR+ + IAL A + ++ + P TFF
Sbjct: 309 LRQTWLAFMIILSILEVIIILLLIFLRKRILIAIALIKEASRAVGYVMCSLLYPLVTFFL 368
Query: 345 LVLFWVYWIMTLLFLGTTGSPVQ---------------NEQGFVEFKIS-----GPLQYM 384
L L YW T +FL T+ V N + F S Q+
Sbjct: 369 LCLCIAYWASTAVFLSTSNEAVYKIFDDSPCPFTAKTCNPETFPSSNESRQCPNARCQFA 428
Query: 385 WW-----YH--VVGL--------IWISEFILACQQMTVAGAVVTYYFT-RDKRNLPFTPI 428
++ YH ++GL W++ F+LA Q+T+AGA +YY+ R +LP P+
Sbjct: 429 FYGGESGYHRALLGLQIFNAFMFFWLANFVLALGQVTLAGAFASYYWALRKPDDLPAFPL 488
Query: 429 LASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLKSCICCLWC 488
++ R +RYH G++A G+ I+ +V+I R+IL Y+ +LK EN A+C++ CC WC
Sbjct: 489 FSAFGRALRYHTGSLAFGALILAIVQIIRVILEYLDQRLKAAENKFAKCLMTCLKCCFWC 548
Query: 489 LEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIV 548
LEK + +LN+NAY AI TNFCTSA++AF +L+ N +RVA ++ V DF+ LGK+LIV
Sbjct: 549 LEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFLLGKLLIV 608
Query: 549 CSTGLAGIMLLNYQ----QDYT-----VWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFL 599
S G+ ++ QD WV P++ V + ++L+AH F S+Y M VD LFL
Sbjct: 609 GSVGILAFFFFTHRIRIVQDTAPPLNYYWV-PILTVIVGSYLIAHGFFSVYGMCVDTLFL 667
Query: 600 CFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEA 636
CF D + NDGS R ++M L + + + K E+
Sbjct: 668 CFLEDLERNDGSAERPYFMSSTLKKLLNKTNKKAAES 704
>gi|194239633 solute carrier family 44, member 5 isoform B [Homo
sapiens]
Length = 717
Score = 257 bits (657), Expect = 2e-68
Identities = 200/703 (28%), Positives = 326/703 (46%), Gaps = 102/703 (14%)
Query: 20 PLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAI 79
P+ +RSCTD+ ++F+L IG + + G R DS G+ CGQK T
Sbjct: 30 PVANRSCTDVLCCMIFLLCIIGYIVLGLVAWVHGDPRRAAYPTDSQGHFCGQKGT----- 84
Query: 80 PNSGMDHTQRKYVFFLDPCNLD--LINRKIKSVALCVAACPRQ-----ELKTLSDVQKFA 132
PN ++ + F L C L+N + + +CV+ CP + E++ L K
Sbjct: 85 PN---ENKTILFYFNLLRCTSPSVLLNLQCPTTQICVSKCPEKFLTYVEMQLLYTKDKSY 141
Query: 133 EINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAP--------VNISCY 184
+ C KP + T CP P+ PF RC P + I
Sbjct: 142 WEDYRQFCKTTAKPVKSLTQLLLDDDCPTAIFPSK---PFLQRCFPDFSTKNGTLTIGSK 198
Query: 185 AKF----------AEALITFVSDNSVLHRLISGVMTSKE-------IILGLCLLSLVLSM 227
F E I N +L G+ ++ I++GL + ++VLS
Sbjct: 199 MMFQDGNGGTRSVVELGIAANGINKLLDAKSLGLKVFEDYARTWYWILIGLTI-AMVLSW 257
Query: 228 ILMVIIRYISRVLVWILTILVILGSLG-GTGVLWWLYAKQRRSPKETVTPEQLQIAEDNL 286
I ++++R+I+ L W+ I VI G +G G + Y + P +T + I + N+
Sbjct: 258 IFLILLRFIAGCLFWVFMIGVI-GIIGYGIWHCYQQYTNLQERPSSVLTIYDIGI-QTNI 315
Query: 287 -------RALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPF 339
+ + I + VI+ L+++ +R R+ + I L K ++P + P
Sbjct: 316 SMYFELQQTWFTFMIILCIIEVIVILMLIFLRNRIRVAIILLKEGSKAIGYVPSTLVYPA 375
Query: 340 WTFFALVLFWVYWIMTLLFLGTTGSPV------------QNEQ----------------- 370
TF L + YW++T +FL T+G PV +N+
Sbjct: 376 LTFILLSICICYWVVTAVFLATSGVPVYKVIAPGGHCIHENQTCDPEIFNTTEIAKACPG 435
Query: 371 GFVEFKISGPL----QYMWWYHVVGL---IWISEFILACQQMTVAGAVVTYYFTRDKRN- 422
F G QY+ +HV L +W+ F++A Q +AGA TYY+ K +
Sbjct: 436 ALCNFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVIALGQCALAGAFATYYWAMKKPDD 495
Query: 423 LPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLKSC 482
+P P+ + R IRYH G++A GS II L+++ +++L Y+ +LK +N ++ L+ C
Sbjct: 496 IPRYPLFTAFGRAIRYHTGSLAFGSLIIALIQMFKIVLEYLDHRLKRTQNTLSK-FLQCC 554
Query: 483 I-CCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLF 541
+ CC WCLE + +LN+NAY AI NFC SAKDAF +L+ N L+VA + V F+LF
Sbjct: 555 LRCCFWCLENAIKFLNRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLKVAVTDEVTYFVLF 614
Query: 542 LGKVLIVCSTGLAGIMLLNYQ--------QDYTVWVLPLIIVCLFAFLVAHCFLSIYEMV 593
LGK+L+ S G+ + + + +PL+ V ++L+AH F S+Y M
Sbjct: 615 LGKLLVAGSIGVLAFLFFTQRLPVIAQGPASLNYYWVPLLTVIFGSYLIAHGFFSVYAMC 674
Query: 594 VDVLFLCFAIDTKYNDGSPGREFYMDKVLME-FVENSRKAMKE 635
V+ +F+CF D + NDGS R +Y+ + L++ F E + + K+
Sbjct: 675 VETIFICFLEDLERNDGSTARPYYVSQPLLKIFQEENPQTRKQ 717
>gi|194239631 solute carrier family 44, member 5 isoform A [Homo
sapiens]
Length = 719
Score = 251 bits (640), Expect = 2e-66
Identities = 194/685 (28%), Positives = 316/685 (46%), Gaps = 101/685 (14%)
Query: 20 PLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAI 79
P+ +RSCTD+ ++F+L IG + + G R DS G+ CGQK T
Sbjct: 30 PVANRSCTDVLCCMIFLLCIIGYIVLGLVAWVHGDPRRAAYPTDSQGHFCGQKGT----- 84
Query: 80 PNSGMDHTQRKYVFFLDPCNLD--LINRKIKSVALCVAACPRQ-----ELKTLSDVQKFA 132
PN ++ + F L C L+N + + +CV+ CP + E++ L K
Sbjct: 85 PN---ENKTILFYFNLLRCTSPSVLLNLQCPTTQICVSKCPEKFLTYVEMQLLYTKDKSY 141
Query: 133 EINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAP--------VNISCY 184
+ C KP + T CP P+ PF RC P + I
Sbjct: 142 WEDYRQFCKTTAKPVKSLTQLLLDDDCPTAIFPSK---PFLQRCFPDFSTKNGTLTIGSK 198
Query: 185 AKF----------AEALITFVSDNSVLHRLISGVMTSKE-------IILGLCLLSLVLSM 227
F E I N +L G+ ++ I++GL + ++VLS
Sbjct: 199 MMFQDGNGGTRSVVELGIAANGINKLLDAKSLGLKVFEDYARTWYWILIGLTI-AMVLSW 257
Query: 228 ILMVIIRYISRVLVWILTILVILGSLG-GTGVLWWLYAKQRRSPKETVTPEQLQIAEDNL 286
I ++++R+I+ L W+ I VI G +G G + Y + P +T + I + N+
Sbjct: 258 IFLILLRFIAGCLFWVFMIGVI-GIIGYGIWHCYQQYTNLQERPSSVLTIYDIGI-QTNI 315
Query: 287 -------RALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPF 339
+ + I + VI+ L+++ +R R+ + I L K ++P + P
Sbjct: 316 SMYFELQQTWFTFMIILCIIEVIVILMLIFLRNRIRVAIILLKEGSKAIGYVPSTLVYPA 375
Query: 340 WTFFALVLFWVYWIMTLLFLGTTGSPV------------QNEQ----------------- 370
TF L + YW++T +FL T+G PV +N+
Sbjct: 376 LTFILLSICICYWVVTAVFLATSGVPVYKVIAPGGHCIHENQTCDPEIFNTTEIAKACPG 435
Query: 371 GFVEFKISGPL----QYMWWYHVVGL---IWISEFILACQQMTVAGAVVTYYFTRDKRN- 422
F G QY+ +HV L +W+ F++A Q +AGA TYY+ K +
Sbjct: 436 ALCNFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVIALGQCALAGAFATYYWAMKKPDD 495
Query: 423 LPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLKSC 482
+P P+ + R IRYH G++A GS II L+++ +++L Y+ +LK +N ++ L+ C
Sbjct: 496 IPRYPLFTAFGRAIRYHTGSLAFGSLIIALIQMFKIVLEYLDHRLKRTQNTLSK-FLQCC 554
Query: 483 I-CCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLF 541
+ CC WCLE + +LN+NAY AI NFC SAKDAF +L+ N L+VA + V F+LF
Sbjct: 555 LRCCFWCLENAIKFLNRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLKVAVTDEVTYFVLF 614
Query: 542 LGKVLIVCSTGLAGIMLLNYQ--------QDYTVWVLPLIIVCLFAFLVAHCFLSIYEMV 593
LGK+L+ S G+ + + + +PL+ V ++L+AH F S+Y M
Sbjct: 615 LGKLLVAGSIGVLAFLFFTQRLPVIAQGPASLNYYWVPLLTVIFGSYLIAHGFFSVYAMC 674
Query: 594 VDVLFLCFAIDTKYNDGSPGREFYM 618
V+ +F+CF D + NDGS + +++
Sbjct: 675 VETIFICFCEDLERNDGSTEKPYFV 699
>gi|148612887 choline transporter-like protein 4 [Homo sapiens]
Length = 710
Score = 250 bits (639), Expect = 3e-66
Identities = 197/704 (27%), Positives = 332/704 (47%), Gaps = 119/704 (16%)
Query: 20 PLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAI 79
P+++RSCTD+ +LF+LF +G + + G +++ +S G CG K
Sbjct: 26 PIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENK---- 81
Query: 80 PNSGMDHTQRKYVFFLDPCNLDLINRKIKSVA----------LCVAACPRQELKTLSDVQ 129
+ Y+ + + + +++ I SVA +CV++CP +
Sbjct: 82 --------DKPYLLYFNIFSC-ILSSNIISVAENGLQCPTPQVCVSSCPEDPWTVGKN-- 130
Query: 130 KFAEINGSALCSYNLK------PSEYTT-SPKSSVLCPKLPVPASAPIPFFHRCAPVNIS 182
+F++ G + N P T + LCP +P++ P RC P
Sbjct: 131 EFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSA---PALGRCFP---- 183
Query: 183 CYAKFAEALITFVSDNSVLHRLISGVMTSKEI-----------------ILGLCLLSLVL 225
+ + +++++ + + ISG++ S IL ++LVL
Sbjct: 184 -WTNVTPPALPGITNDTTIQQGISGLIDSLNARDISVKIFEDFAQSWYWILVALGVALVL 242
Query: 226 SMILMVIIRYISRVLVWILTILVILGSLG-GTGVLWWLYAKQRRSPKE-------TVTPE 277
S++ ++++R ++ LV +L IL +LG L G W Y R T
Sbjct: 243 SLLFILLLRLVAGPLVLVL-ILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFTTNLSA 301
Query: 278 QLQIAEDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQ 337
+ E L AL++ A V IL L+++ +R+R+ + IAL A K + +F
Sbjct: 302 YQSVQETWLAALIVLA----VLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFY 357
Query: 338 PFWTFFALVLFWVYWIMTLLFLGTTGSPVQ-------NEQG------------------- 371
P TF L++ YW MT L+L T+G P + G
Sbjct: 358 PLVTFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNPTAHLVNS 417
Query: 372 --------FVEFKISGPLQYMWW----YHVVGLIWISEFILACQQMTVAGAVVTYYFTRD 419
F + G +Q + Y V+GL W ++LA Q +AGA ++Y+
Sbjct: 418 SCPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFH 477
Query: 420 K-RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCV 478
K +++P P++++ R +RYH G++A G+ I+TLV+I R+IL YI +L+G +N ARC+
Sbjct: 478 KPQDIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLRGVQNPVARCI 537
Query: 479 LKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDF 538
+ CCLWCLEK + +LN+NAY AI NFC SAK+AF++L+ N +RV ++ V D
Sbjct: 538 MCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDL 597
Query: 539 MLFLGKVLIVCSTGLAGIMLLNYQ-----QDY-----TVWVLPLIIVCLFAFLVAHCFLS 588
+LF GK+L+V G+ + + +D+ + LP++ L A+++A F S
Sbjct: 598 LLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIASGFFS 657
Query: 589 IYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKA 632
++ M VD LFLCF D + N+GS R +YM K L++ + +A
Sbjct: 658 VFGMCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEA 701
>gi|169214831 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 35.4 bits (80), Expect = 0.17
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 14/140 (10%)
Query: 519 FVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTV---WVLPLIIV 575
F I+V+ + ++ +N + + + LG V + S + + + Y T W PL +
Sbjct: 34 FFIVVKGVIVLSFLNELREVVPSLGPVSVCLSLCILSMAIREYLLVKTHPPRWAAPLSFI 93
Query: 576 CLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKE 635
+ A L AHC L + + + FL P +F D F+ S M E
Sbjct: 94 KIPARLAAHCLLDFLDEFLLLFFL-----------PPVAKFESDSASPVFISTSGPTMNE 142
Query: 636 AGKGGVADSRELKPMASGAS 655
K D ++ +A S
Sbjct: 143 RLKEAARDDFVVRSVAVACS 162
>gi|169215032 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 35.4 bits (80), Expect = 0.17
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 14/140 (10%)
Query: 519 FVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTV---WVLPLIIV 575
F I+V+ + ++ +N + + + LG V + S + + + Y T W PL +
Sbjct: 34 FFIVVKGVIVLSFLNELREVVPSLGPVSVCLSLCILSMAIREYLLVKTHPPRWAAPLSFI 93
Query: 576 CLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKE 635
+ A L AHC L + + + FL P +F D F+ S M E
Sbjct: 94 KIPARLAAHCLLDFLDEFLLLFFL-----------PPVAKFESDSASPVFISTSGPTMNE 142
Query: 636 AGKGGVADSRELKPMASGAS 655
K D ++ +A S
Sbjct: 143 RLKEAARDDFVVRSVAVACS 162
>gi|169214556 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 35.4 bits (80), Expect = 0.17
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 14/140 (10%)
Query: 519 FVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTV---WVLPLIIV 575
F I+V+ + ++ +N + + + LG V + S + + + Y T W PL +
Sbjct: 34 FFIVVKGVIVLSFLNELREVVPSLGPVSVCLSLCILSMAIREYLLVKTHPPRWAAPLSFI 93
Query: 576 CLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKE 635
+ A L AHC L + + + FL P +F D F+ S M E
Sbjct: 94 KIPARLAAHCLLDFLDEFLLLFFL-----------PPVAKFESDSASPVFISTSGPTMNE 142
Query: 636 AGKGGVADSRELKPMASGAS 655
K D ++ +A S
Sbjct: 143 RLKEAARDDFVVRSVAVACS 162
>gi|157388921 transmembrane and coiled-coil domains 3 [Homo sapiens]
Length = 677
Score = 33.1 bits (74), Expect = 0.83
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 25/214 (11%)
Query: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTILVILG----SLGGTGVL 259
++ G++ ++++ LGL + V+ ++ S ++V +L ILV++G SL +L
Sbjct: 416 VLLGMLVTQDVQLGLFMA--VMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLL 473
Query: 260 WWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFTVILF--LIMLVMRKRVALT 317
+ K P +L + + +LI ISA +F ++ L+ + M L
Sbjct: 474 CLVIKKYLIGPYY----RKLHMESKGNKEILILGISAFIFLMLTVTELLDVSMELGCFLA 529
Query: 318 IALFHVAGKVFIHLPLLVFQPFWTFFALVLFW-----------VYWIMTLLFLGTTGSPV 366
AL G V +P F A+V F Y + L+FL + +
Sbjct: 530 GALVSSQGPVVTEEIATSIEPIRDFLAIVFFASIGLHVFPTFVAYELTVLVFLTLSVVVM 589
Query: 367 QNEQGFVEFKISGPL--QYMWWYHVVGLIWISEF 398
+ + + P QY+ W GL +SEF
Sbjct: 590 KFLLAALVLSLILPRSSQYIKWIVSAGLAQVSEF 623
>gi|224809466 anthrax toxin receptor 2 isoform 2 [Homo sapiens]
Length = 489
Score = 31.2 bits (69), Expect = 3.2
Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 49/135 (36%)
Query: 135 NGSALCSYNLKPSEYTTSPK------SSVLCPKLPVPASAPIPFFHRCAPVNISCYAKFA 188
NGS LC+Y + + YTTS K +S+LCP API K
Sbjct: 250 NGSVLCTYTVNET-YTTSVKPVSVQLNSMLCP-------API-------------LNKAG 288
Query: 189 EALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTILV 248
E L VS N K +I G L+V S + I+ ILV
Sbjct: 289 ETLDVSVSFNG-----------GKSVISG----------SLIVTATECSNGIAAIIVILV 327
Query: 249 ILGSLGGTGVLWWLY 263
+L L G G++WW +
Sbjct: 328 LL-LLLGIGLMWWFW 341
>gi|50513243 anthrax toxin receptor 2 isoform 1 [Homo sapiens]
Length = 488
Score = 31.2 bits (69), Expect = 3.2
Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 49/135 (36%)
Query: 135 NGSALCSYNLKPSEYTTSPK------SSVLCPKLPVPASAPIPFFHRCAPVNISCYAKFA 188
NGS LC+Y + + YTTS K +S+LCP API K
Sbjct: 250 NGSVLCTYTVNET-YTTSVKPVSVQLNSMLCP-------API-------------LNKAG 288
Query: 189 EALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTILV 248
E L VS N K +I G L+V S + I+ ILV
Sbjct: 289 ETLDVSVSFNG-----------GKSVISG----------SLIVTATECSNGIAAIIVILV 327
Query: 249 ILGSLGGTGVLWWLY 263
+L L G G++WW +
Sbjct: 328 LL-LLLGIGLMWWFW 341
>gi|24475847 influenza virus NS1A binding protein [Homo sapiens]
Length = 642
Score = 31.2 bits (69), Expect = 3.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 2 GCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFIL---FCI 40
GC SS ++ QS K EWK + ++ +L L +L FC+
Sbjct: 273 GCLSSPNATVQSPKHEWKIVASEKTSNNTYLCLAVLDGIFCV 314
>gi|4506163 presenilin 1 isoform I-467 [Homo sapiens]
Length = 467
Score = 30.8 bits (68), Expect = 4.1
Identities = 38/235 (16%), Positives = 93/235 (39%), Gaps = 12/235 (5%)
Query: 361 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK 420
+ G P N + VE + Y +I + + C + VA ++TR
Sbjct: 51 SNGRPQGNSRQVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKD 110
Query: 421 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK 480
L +TP + + L ++ + +I+++ + ++L+ ++ + C + +
Sbjct: 111 GQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLY------KYRCYKVIHA 164
Query: 481 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML 540
I L +++ T + ++ T A +L+ N V I+ L
Sbjct: 165 WLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVA-----LLIWNFGVVGMISIHWKGPL 219
Query: 541 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVD 595
L + ++ + L ++ + Y ++T W++ L ++ ++ + C M+V+
Sbjct: 220 RLQQAYLIMISALMALVFIKYLPEWTAWLI-LAVISVYDLVAVLCPKGPLRMLVE 273
>gi|195947397 presenilin 1 isoform I-463 [Homo sapiens]
Length = 463
Score = 30.8 bits (68), Expect = 4.1
Identities = 38/235 (16%), Positives = 93/235 (39%), Gaps = 12/235 (5%)
Query: 361 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK 420
+ G P N + VE + Y +I + + C + VA ++TR
Sbjct: 47 SNGRPQGNSRQVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKD 106
Query: 421 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK 480
L +TP + + L ++ + +I+++ + ++L+ ++ + C + +
Sbjct: 107 GQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLY------KYRCYKVIHA 160
Query: 481 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML 540
I L +++ T + ++ T A +L+ N V I+ L
Sbjct: 161 WLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVA-----LLIWNFGVVGMISIHWKGPL 215
Query: 541 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVD 595
L + ++ + L ++ + Y ++T W++ L ++ ++ + C M+V+
Sbjct: 216 RLQQAYLIMISALMALVFIKYLPEWTAWLI-LAVISVYDLVAVLCPKGPLRMLVE 269
>gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens]
Length = 1388
Score = 30.8 bits (68), Expect = 4.1
Identities = 35/183 (19%), Positives = 72/183 (39%), Gaps = 30/183 (16%)
Query: 49 SIATGAAARLVSGYDSYGNIC---------GQKNTKLEAIPNSGMDHTQRKYVFFLDPCN 99
++ +GA + + G + GN+ G T L +P+SG+ T++
Sbjct: 405 ALDSGAMSTPLMGAPASGNMSTLQKTVPASGAMTTSLMTVPSSGVMSTEQ---------- 454
Query: 100 LDLINRKIKSVALCVA----ACPRQELKTLSDVQKFAEINGSALCSYNLKPSE------- 148
+ ++ S L +A A P +K ++ K A +G P+
Sbjct: 455 MSATASRVMSAQLTMAKTSGAMPTGSMKAVAKQYKRATASGKMSTPLRRAPTSGAMSTQP 514
Query: 149 YTTSPKSSVLCPKLPVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGV 208
T + ++ P+L VPAS + APV+ + + + ++ + + + SG
Sbjct: 515 VTATASETMSMPQLTVPASGSMSMLQMRAPVSEAMSMPQMRTMASGLTSAAQMKAMTSGA 574
Query: 209 MTS 211
M++
Sbjct: 575 MST 577
>gi|22296884 transmembrane protein 185A [Homo sapiens]
Length = 350
Score = 30.0 bits (66), Expect = 7.1
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 218 LCLLSLVLSMILMVIIRYISRVL---VWILTILVILGSLGGTGVLWWLYAKQRRSPKETV 274
L L S++L++ L II++ + +W+ ++VI+G+ GTGV W Q R+ ET
Sbjct: 21 LLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIVGASVGTGV--WARNPQYRAEGETC 78
Query: 275 TPEQLQIAEDNLRALLI 291
+ + + LL+
Sbjct: 79 VEFKAMLIAVGIHLLLL 95
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.140 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,031,501
Number of Sequences: 37866
Number of extensions: 976642
Number of successful extensions: 3270
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3215
Number of HSP's gapped (non-prelim): 37
length of query: 657
length of database: 18,247,518
effective HSP length: 109
effective length of query: 548
effective length of database: 14,120,124
effective search space: 7737827952
effective search space used: 7737827952
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.