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Search of human proteins with 170932532
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170932532 major facilitator superfamily domain containing 4
[Homo sapiens]
(514 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170932532 major facilitator superfamily domain containing 4 [... 1030 0.0
gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens] 79 1e-14
gi|148298722 zinc finger protein 185 [Homo sapiens] 36 0.073
gi|24497490 solute carrier family 22 member 4 [Homo sapiens] 33 0.62
gi|23592238 glucose transporter 14 [Homo sapiens] 33 0.62
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 33 0.81
gi|5902090 solute carrier family 2 (facilitated glucose transpor... 32 1.8
gi|16445357 hypothetical protein LOC116843 [Homo sapiens] 31 3.1
gi|21361449 solute carrier family 2 (facilitated glucose transpo... 30 4.0
gi|168693669 zinc finger protein 683 [Homo sapiens] 30 4.0
gi|148727315 zinc finger protein 683 [Homo sapiens] 30 4.0
gi|5730045 solute carrier family 16, member 2 [Homo sapiens] 30 6.9
gi|68800005 tetraspanin 4 isoform a [Homo sapiens] 30 6.9
gi|4507543 tetraspanin 4 isoform a [Homo sapiens] 30 6.9
gi|68800018 tetraspanin 4 isoform a [Homo sapiens] 30 6.9
gi|68800024 tetraspanin 4 isoform a [Homo sapiens] 30 6.9
gi|68800011 tetraspanin 4 isoform a [Homo sapiens] 30 6.9
gi|68799997 tetraspanin 4 isoform a [Homo sapiens] 30 6.9
gi|171906575 drebrin-like isoform c [Homo sapiens] 29 9.0
gi|62198235 drebrin-like isoform b [Homo sapiens] 29 9.0
gi|21361670 drebrin-like isoform a [Homo sapiens] 29 9.0
>gi|170932532 major facilitator superfamily domain containing 4
[Homo sapiens]
Length = 514
Score = 1030 bits (2663), Expect = 0.0
Identities = 514/514 (100%), Positives = 514/514 (100%)
Query: 1 MGCDGRVSGLLRRNLQPTLTYWSVFFSFGLCIAFLGPTLLDLRCQTHSSLPQISWVFFSQ 60
MGCDGRVSGLLRRNLQPTLTYWSVFFSFGLCIAFLGPTLLDLRCQTHSSLPQISWVFFSQ
Sbjct: 1 MGCDGRVSGLLRRNLQPTLTYWSVFFSFGLCIAFLGPTLLDLRCQTHSSLPQISWVFFSQ 60
Query: 61 QLCLLLGSALGGVFKRTLAQSLWALFTSSLAISLVFAVIPFCRDVKVLASVMALAGLAMG 120
QLCLLLGSALGGVFKRTLAQSLWALFTSSLAISLVFAVIPFCRDVKVLASVMALAGLAMG
Sbjct: 61 QLCLLLGSALGGVFKRTLAQSLWALFTSSLAISLVFAVIPFCRDVKVLASVMALAGLAMG 120
Query: 121 CIDTVANMQLVRMYQKDSAVFLQVLHFFVGFGALLSPLIADPFLSEANCLPANSTANTTS 180
CIDTVANMQLVRMYQKDSAVFLQVLHFFVGFGALLSPLIADPFLSEANCLPANSTANTTS
Sbjct: 121 CIDTVANMQLVRMYQKDSAVFLQVLHFFVGFGALLSPLIADPFLSEANCLPANSTANTTS 180
Query: 181 RGHLFHVSRVLGQHHVDAKPWSNQTFPGLTPKDGAGTRVSYAFWIMALINLPVPMAVLML 240
RGHLFHVSRVLGQHHVDAKPWSNQTFPGLTPKDGAGTRVSYAFWIMALINLPVPMAVLML
Sbjct: 181 RGHLFHVSRVLGQHHVDAKPWSNQTFPGLTPKDGAGTRVSYAFWIMALINLPVPMAVLML 240
Query: 241 LSKERLLTCCPQRRPLLLSADELALETQPPEKEDASSLPPKFQSHLGHEDLFSCCQRKNL 300
LSKERLLTCCPQRRPLLLSADELALETQPPEKEDASSLPPKFQSHLGHEDLFSCCQRKNL
Sbjct: 241 LSKERLLTCCPQRRPLLLSADELALETQPPEKEDASSLPPKFQSHLGHEDLFSCCQRKNL 300
Query: 301 RGAPYSFFAIHITGALVLFMTDGLTGAYSAFVYSYAVEKPLSVGHKVAGYLPSLFWGFIT 360
RGAPYSFFAIHITGALVLFMTDGLTGAYSAFVYSYAVEKPLSVGHKVAGYLPSLFWGFIT
Sbjct: 301 RGAPYSFFAIHITGALVLFMTDGLTGAYSAFVYSYAVEKPLSVGHKVAGYLPSLFWGFIT 360
Query: 361 LGRLLSIPISSRMKPATMVFINVVGVVVTFLVLLIFSYNVVFLFVGTASLGLFLSSTFPS 420
LGRLLSIPISSRMKPATMVFINVVGVVVTFLVLLIFSYNVVFLFVGTASLGLFLSSTFPS
Sbjct: 361 LGRLLSIPISSRMKPATMVFINVVGVVVTFLVLLIFSYNVVFLFVGTASLGLFLSSTFPS 420
Query: 421 MLAYTEDSLQYKGCATTVLVTGAGVGEMVLQMLVGSIFQAQGSYSFLVCGVIFGCLAFTF 480
MLAYTEDSLQYKGCATTVLVTGAGVGEMVLQMLVGSIFQAQGSYSFLVCGVIFGCLAFTF
Sbjct: 421 MLAYTEDSLQYKGCATTVLVTGAGVGEMVLQMLVGSIFQAQGSYSFLVCGVIFGCLAFTF 480
Query: 481 YILLLFFHRMHPGLPSVPTQDRSIGMENSECYQR 514
YILLLFFHRMHPGLPSVPTQDRSIGMENSECYQR
Sbjct: 481 YILLLFFHRMHPGLPSVPTQDRSIGMENSECYQR 514
>gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens]
Length = 518
Score = 79.0 bits (193), Expect = 1e-14
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Query: 25 FFSFGLCIAFLGPTLLDLRCQTHSSLPQISWVFFSQQLCLLLGSALGGVFKRTLAQSLWA 84
F GL +A +GPT DL + ++ +S++F + L L GS +GG + L
Sbjct: 6 FLGLGLSVAIVGPTFQDLATNVNRNISSLSFIFVGRALGYLSGSVIGGFLVDVMNYFL-L 64
Query: 85 LFTSSLAISLVFAVIPFCRDVKVLASVMALAGLAMGCIDTVANMQLVRMYQKDSAVFLQV 144
L S A ++ ++PFC+ +L +M++ G+++G +DT N+ ++ ++ A +Q
Sbjct: 65 LGISMSATTVGLYLVPFCKTAILLTVMMSIFGVSIGILDTGGNVLILAIWGDKGAPHMQA 124
Query: 145 LHFFVGFGALLSPLIA 160
LHF GA L+PL+A
Sbjct: 125 LHFSFALGAFLAPLLA 140
Score = 75.5 bits (184), Expect = 1e-13
Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 316 LVLFMTDGLTGAYSAFVYSYAVEKPLSVGHKVAGYLPSLFWGFITLGRLLSIPISSRMKP 375
L F G Y ++V+S+A + AG L S+FWG R L+I ++ ++P
Sbjct: 236 LFFFFYVGAEVTYGSYVFSFATTHAGMKESEAAG-LNSIFWGTFAACRGLAIFFATCLQP 294
Query: 376 ATMVFINVVGVVVTFLVLLIFSYNVVFLFVGTASLGLFLSSTFPSMLAYTEDSLQYKGCA 435
TM+ ++ +G + + L L++F N + L++ T+ G +++TFPS +++ E G +
Sbjct: 295 GTMIVLSNIGSLTSSLFLVLFDKNPICLWIATSVYGASMATTFPSGVSWIEQYTTIHGKS 354
Query: 436 TTVLVTGAGVGEMVLQMLVGSIFQAQGSY 464
V GA +GEM + ++G + QG Y
Sbjct: 355 AAFFVIGASLGEMAIPAVIGIL---QGKY 380
>gi|148298722 zinc finger protein 185 [Homo sapiens]
Length = 689
Score = 36.2 bits (82), Expect = 0.073
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 207 PGLTPKDGAGTRVSYAFWIMALINLPVPMAVLMLLSK----ERLLTCCPQRRPLLLSADE 262
PG DG T+ S A WI L ++P P L S+ RL P+ L++ D
Sbjct: 242 PGSNSADGGRTKASRAIWIECLPSMPSPAGSQELSSRGEEIVRLQILTPRAGLRLVAPDV 301
Query: 263 LALETQPPEKEDASSLPPKFQSHLGHEDLF 292
+ + P K+ + + Q L E+ F
Sbjct: 302 EGMRSSPGNKDKEAPCSRELQRDLAGEEAF 331
>gi|24497490 solute carrier family 22 member 4 [Homo sapiens]
Length = 551
Score = 33.1 bits (74), Expect = 0.62
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 385 GVVVTFLVLLIFSYNVVFLFVGTASLGLF-LSSTFPSMLAYTEDSLQYKGCATTVLVTGA 443
G V+ F+ L+ Y FL +G LG F ++S F + +T + LV
Sbjct: 409 GGVLLFIQLVPVDY--YFLSIGLVMLGKFGITSAFSMLYVFTAELYP-------TLVRNM 459
Query: 444 GVGEMVLQMLVGSI----FQAQGSYSFLVCGVIFGCLAFTFYILLLFF 487
VG VGSI F G+Y+ ++ ++ G L IL LFF
Sbjct: 460 AVGVTSTASRVGSIIAPYFVYLGAYNRMLPYIVMGSLTVLIGILTLFF 507
>gi|23592238 glucose transporter 14 [Homo sapiens]
Length = 520
Score = 33.1 bits (74), Expect = 0.62
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 315 ALVLFMTDGLTGAYSAFVYSYAVEKPLSVGHKVAGYLPSLFWGFI-TLGRLLSIPISSRM 373
++VL ++ L+G + F YS + K V + + + G + T+ LLS+ + R
Sbjct: 297 SIVLQLSQQLSGINAVFYYSTGIFKDAGVQQPIYATISA---GVVNTIFTLLSLFLVERA 353
Query: 374 KPATMVFINVVGV-----VVTFLVLLIFSYN-VVFLFVGTASLGLFLSSTFPSMLAYTED 427
T+ I + G+ ++T +LL YN + F+ +G + + P + +
Sbjct: 354 GRRTLHMIGLGGMAFCSTLMTVSLLLKNHYNGMSFVCIGAILVFVACFEIGPGPIPWFIV 413
Query: 428 SLQYKGCATTVLVTGAGVGEMVLQMLVGSIFQAQ----GSYSFLV-CGVIFGCLAFTFY 481
+ + + AG LVG +F + G+Y F++ G + LAFTF+
Sbjct: 414 AELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLGAYVFIIFTGFLITFLAFTFF 472
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 32.7 bits (73), Expect = 0.81
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 250 CPQRRPLLLSADELALETQPPEKEDASSLPPKFQSHLG 287
CPQ PLL S + ED+++ PP F +H+G
Sbjct: 580 CPQETPLLHSLTQEGKRRPESSPEDSATRPPPFDAHVG 617
>gi|5902090 solute carrier family 2 (facilitated glucose
transporter), member 3 [Homo sapiens]
Length = 496
Score = 31.6 bits (70), Expect = 1.8
Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 315 ALVLFMTDGLTGAYSAFVYSYAVEKPLSVGHKVAGYLPSLFWGFI-TLGRLLSIPISSRM 373
++VL ++ L+G + F YS + K V + + + G + T+ ++S+ + R
Sbjct: 273 SIVLQLSQQLSGINAVFYYSTGIFKDAGVQEPIYATIGA---GVVNTIFTVVSLFLVERA 329
Query: 374 KPATMVFINVVGV-----VVTFLVLLIFSYN-VVFLFVGTASLGLFLSSTFPSMLAYTED 427
T+ I + G+ ++T +LL +YN + F+ +G + + P + +
Sbjct: 330 GRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVCIGAILVFVAFFEIGPGPIPWFIV 389
Query: 428 SLQYKGCATTVLVTGAGVGEMVLQMLVGSIFQAQ----GSYSFLV-CGVIFGCLAFTFY 481
+ + + AG LVG +F + G+Y F++ G + LAFTF+
Sbjct: 390 AELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITFLAFTFF 448
>gi|16445357 hypothetical protein LOC116843 [Homo sapiens]
Length = 456
Score = 30.8 bits (68), Expect = 3.1
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 351 LPSLFWGFITLGRLLSIPISSRM-------KPATMVFINVVGVVVTFLVLLIFS------ 397
LP+ + G + LG LS ISS + +P ++ V G ++T ++
Sbjct: 268 LPAGYVGLVFLGMALSYAISSPLFGLLSDKRPPLRKWLLVFGNLITAGCYMLLGPVPILH 327
Query: 398 ------YNVVFLFVGTASLGLFLSSTFPSMLAYTEDSLQYKGCATTVLVTGA-----GVG 446
V+ L V S G+ + TFP +L+ ++ +G +T LV+G +G
Sbjct: 328 IKSQLWLLVLILVVSGLSAGMSIIPTFPEILSCAHENGFEEGLSTLGLVSGLFSAMWSIG 387
Query: 447 EMVLQMLVGSIFQAQG-SYSFLVCG---VIFGCLAFTFYIL 483
+ L G +++ G ++ + G +I G FY+L
Sbjct: 388 AFMGPTLGGFLYEKIGFEWAAAIQGLWALISGLAMGLFYLL 428
>gi|21361449 solute carrier family 2 (facilitated glucose
transporter), member 8 [Homo sapiens]
Length = 477
Score = 30.4 bits (67), Expect = 4.0
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Query: 27 SFGLCIAFLGPTLLDLRCQTHSSLPQI-----SWVFFSQQLCLLLGSALGGVFKRTLAQS 81
SFG + + P + L+ + P++ SW L G LGG +
Sbjct: 39 SFGFALGYSSPAIPSLQ-RAAPPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRK 97
Query: 82 LWALFTSSLAISLVFAVIPFCRDVKVLASVMALAGLAMGCIDTVA 126
L +L S+ FAVI +DV +L L GLA G VA
Sbjct: 98 L-SLLLCSVPFVAGFAVITAAQDVWMLLGGRLLTGLACGVASLVA 141
>gi|168693669 zinc finger protein 683 [Homo sapiens]
Length = 504
Score = 30.4 bits (67), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 220 SYAFWIMALINLPVPMAVLMLLSKERLLTCCPQRRPL-----LLSADELALETQPPEKED 274
S A W+ L P A+L L L C PQ PL L D L+++ +PP +
Sbjct: 56 SCASWLCPLPLAPGRSALLACLQDLDLNLCTPQPAPLGTDLQGLQEDALSMKHEPPGLQA 115
Query: 275 ASSLPPKFQ-SHLGHEDLFSCCQRKNLRGAPYSFFAIH 311
+S+ KF + ++D + GAP F+ H
Sbjct: 116 SSTDDKKFTVKYPQNKDKLGKQPERAGEGAPCPAFSSH 153
>gi|148727315 zinc finger protein 683 [Homo sapiens]
Length = 504
Score = 30.4 bits (67), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 220 SYAFWIMALINLPVPMAVLMLLSKERLLTCCPQRRPL-----LLSADELALETQPPEKED 274
S A W+ L P A+L L L C PQ PL L D L+++ +PP +
Sbjct: 56 SCASWLCPLPLAPGRSALLACLQDLDLNLCTPQPAPLGTDLQGLQEDALSMKHEPPGLQA 115
Query: 275 ASSLPPKFQ-SHLGHEDLFSCCQRKNLRGAPYSFFAIH 311
+S+ KF + ++D + GAP F+ H
Sbjct: 116 SSTDDKKFTVKYPQNKDKLGKQPERAGEGAPCPAFSSH 153
>gi|5730045 solute carrier family 16, member 2 [Homo sapiens]
Length = 613
Score = 29.6 bits (65), Expect = 6.9
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 26 FSFGLCIAFLGPTL--LDLRCQTHSSLPQI--SWVFFSQQLCLLLGSALGGVFKRTLAQS 81
++FG+ A LG + + L +I +WV +C+ S LG + ++ S
Sbjct: 398 WAFGIAAAALGYFVPYVHLMKYVEEEFSEIKETWVLL---VCIGATSGLGRLVSGHISDS 454
Query: 82 LWAL------FTSSLAISLVFAVIPFCRDVKVLASVMALAGLAMGCIDTV---ANMQLVR 132
+ L S L + L+ +IP CRD L V GL G T+ +LV
Sbjct: 455 IPGLKKIYLQVLSFLLLGLMSMMIPLCRDFGGLIVVCLFLGLCDGFFITIMAPIAFELVG 514
Query: 133 MYQKDSAVFLQVLHFFVGFGALLSPLIADP 162
Q Q + + +G AL P+IA P
Sbjct: 515 PMQAS-----QAIGYLLGMMAL--PMIAGP 537
>gi|68800005 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 29.6 bits (65), Expect = 6.9
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 394 LIFSYNVVFLF--VGTASLGLFLSSTFPSMLAYTEDSLQYKGCATTVLVTGAGVGEMVLQ 451
L+F++N++F G +G++L++T S A S A +++TGA V +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSF-ATLSSSFPSLSAANLLIITGAFVMAIGFV 70
Query: 452 MLVGSIFQAQGSYSFLVCGVIFGCLAFTFYILLL 485
+G+I + + CL TF++LLL
Sbjct: 71 GCLGAIKENK-------------CLLLTFFLLLL 91
>gi|4507543 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 29.6 bits (65), Expect = 6.9
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 394 LIFSYNVVFLF--VGTASLGLFLSSTFPSMLAYTEDSLQYKGCATTVLVTGAGVGEMVLQ 451
L+F++N++F G +G++L++T S A S A +++TGA V +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSF-ATLSSSFPSLSAANLLIITGAFVMAIGFV 70
Query: 452 MLVGSIFQAQGSYSFLVCGVIFGCLAFTFYILLL 485
+G+I + + CL TF++LLL
Sbjct: 71 GCLGAIKENK-------------CLLLTFFLLLL 91
>gi|68800018 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 29.6 bits (65), Expect = 6.9
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 394 LIFSYNVVFLF--VGTASLGLFLSSTFPSMLAYTEDSLQYKGCATTVLVTGAGVGEMVLQ 451
L+F++N++F G +G++L++T S A S A +++TGA V +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSF-ATLSSSFPSLSAANLLIITGAFVMAIGFV 70
Query: 452 MLVGSIFQAQGSYSFLVCGVIFGCLAFTFYILLL 485
+G+I + + CL TF++LLL
Sbjct: 71 GCLGAIKENK-------------CLLLTFFLLLL 91
>gi|68800024 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 29.6 bits (65), Expect = 6.9
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 394 LIFSYNVVFLF--VGTASLGLFLSSTFPSMLAYTEDSLQYKGCATTVLVTGAGVGEMVLQ 451
L+F++N++F G +G++L++T S A S A +++TGA V +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSF-ATLSSSFPSLSAANLLIITGAFVMAIGFV 70
Query: 452 MLVGSIFQAQGSYSFLVCGVIFGCLAFTFYILLL 485
+G+I + + CL TF++LLL
Sbjct: 71 GCLGAIKENK-------------CLLLTFFLLLL 91
>gi|68800011 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 29.6 bits (65), Expect = 6.9
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 394 LIFSYNVVFLF--VGTASLGLFLSSTFPSMLAYTEDSLQYKGCATTVLVTGAGVGEMVLQ 451
L+F++N++F G +G++L++T S A S A +++TGA V +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSF-ATLSSSFPSLSAANLLIITGAFVMAIGFV 70
Query: 452 MLVGSIFQAQGSYSFLVCGVIFGCLAFTFYILLL 485
+G+I + + CL TF++LLL
Sbjct: 71 GCLGAIKENK-------------CLLLTFFLLLL 91
>gi|68799997 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 29.6 bits (65), Expect = 6.9
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 394 LIFSYNVVFLF--VGTASLGLFLSSTFPSMLAYTEDSLQYKGCATTVLVTGAGVGEMVLQ 451
L+F++N++F G +G++L++T S A S A +++TGA V +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSF-ATLSSSFPSLSAANLLIITGAFVMAIGFV 70
Query: 452 MLVGSIFQAQGSYSFLVCGVIFGCLAFTFYILLL 485
+G+I + + CL TF++LLL
Sbjct: 71 GCLGAIKENK-------------CLLLTFFLLLL 91
>gi|171906575 drebrin-like isoform c [Homo sapiens]
Length = 439
Score = 29.3 bits (64), Expect = 9.0
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 251 PQRRPLLLSADELALETQPPEKEDASSLPPKFQSH-LGHEDLFSCCQRKNLRG 302
P P L+ A+E A+ +PPE+E PP Q G E + Q + L G
Sbjct: 328 PSTPPCLVQAEEEAVYEEPPEQETFYEQPPLVQQQGAGSEHIDHHIQGQGLSG 380
>gi|62198235 drebrin-like isoform b [Homo sapiens]
Length = 430
Score = 29.3 bits (64), Expect = 9.0
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 251 PQRRPLLLSADELALETQPPEKEDASSLPPKFQSH-LGHEDLFSCCQRKNLRG 302
P P L+ A+E A+ +PPE+E PP Q G E + Q + L G
Sbjct: 319 PSTPPCLVQAEEEAVYEEPPEQETFYEQPPLVQQQGAGSEHIDHHIQGQGLSG 371
>gi|21361670 drebrin-like isoform a [Homo sapiens]
Length = 431
Score = 29.3 bits (64), Expect = 9.0
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 251 PQRRPLLLSADELALETQPPEKEDASSLPPKFQSH-LGHEDLFSCCQRKNLRG 302
P P L+ A+E A+ +PPE+E PP Q G E + Q + L G
Sbjct: 320 PSTPPCLVQAEEEAVYEEPPEQETFYEQPPLVQQQGAGSEHIDHHIQGQGLSG 372
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.140 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,569,745
Number of Sequences: 37866
Number of extensions: 797240
Number of successful extensions: 2424
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2415
Number of HSP's gapped (non-prelim): 26
length of query: 514
length of database: 18,247,518
effective HSP length: 107
effective length of query: 407
effective length of database: 14,195,856
effective search space: 5777713392
effective search space used: 5777713392
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.