Guide to the Human Genome
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Name: MFSD4 Sequence: fasta or formatted (514aa) NCBI GI: 170932532
Description:

major facilitator superfamily domain containing 4

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         39           1
 C cysteine            2.9         15           2
 D aspartate           2.7         14           1
 E glutamate           2.3         12           1
 F phenylalanine       7.8         40           2
 G glycine             7.6         39           2
 H histidine           2.3         12           2
 I isoleucine          3.7         19           1
 K lysine              2.5         13           1
 L leucine            15.0         77           3
 M methionine          3.1         16           1
 N asparagine          2.1         11           1
 P proline             5.3         27           2
 Q glutamine           4.1         21           2
 R arginine            3.9         20           2
 S serine              9.1         47           2
 T threonine           5.6         29           2
 V valine              8.4         43           3
 W tryptophan          1.2          6           1
 Y tyrosine            2.7         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   major facilitator superfamily domain containing 4 [... 
KIAA1919              0.054   sodium-dependent glucose transporter 1 
ZNF185                0.011   zinc finger protein 185 
SLC22A4               0.008   solute carrier family 22 member 4 
SLC2A14               0.008   glucose transporter 14 
SHROOM2               0.008   apical protein of Xenopus-like 
SLC2A3                0.007   solute carrier family 2 (facilitated glucose transpor...
C6orf192              0.006   hypothetical protein LOC116843 
SLC2A8                0.005   solute carrier family 2 (facilitated glucose transpo...
ZNF683                0.005   zinc finger protein 683 
ZNF683                0.005   zinc finger protein 683 
SLC16A2               0.005   solute carrier family 16, member 2 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
TSPAN4                0.005   tetraspanin 4 isoform a 
DBNL                  0.004   drebrin-like isoform c 
DBNL                  0.004   drebrin-like isoform b 
DBNL                  0.004   drebrin-like isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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